scaffold_1 StringTie exon 904719 904927 1000 . . gene_id "MSTRG.48"; transcript_id "MSTRG.48.1"; exon_number "1"; scaffold_1 StringTie exon 910186 910568 1000 . . gene_id "MSTRG.50"; transcript_id "MSTRG.50.1"; exon_number "1"; scaffold_1 StringTie exon 1053935 1054201 1000 . . gene_id "MSTRG.53"; transcript_id "MSTRG.53.1"; exon_number "1"; scaffold_1 StringTie exon 1254709 1255104 1000 . . gene_id "MSTRG.59"; transcript_id "MSTRG.59.1"; exon_number "1"; scaffold_1 StringTie exon 1579938 1580184 1000 . . gene_id "MSTRG.85"; transcript_id "MSTRG.85.1"; exon_number "1"; scaffold_1 StringTie exon 1780677 1782299 1000 - . gene_id "MSTRG.105"; transcript_id "MSTRG.105.1"; exon_number "1"; scaffold_1 StringTie exon 1791058 1791477 1000 . . gene_id "MSTRG.107"; transcript_id "MSTRG.107.1"; exon_number "1"; scaffold_1 StringTie exon 2026023 2026395 1000 . . gene_id "MSTRG.117"; transcript_id "MSTRG.117.1"; exon_number "1"; scaffold_1 StringTie exon 2134382 2134464 1000 - . gene_id "MSTRG.128"; transcript_id "MSTRG.128.4"; exon_number "1"; scaffold_1 StringTie exon 2134992 2135123 1000 - . gene_id "MSTRG.128"; transcript_id "MSTRG.128.4"; exon_number "2"; scaffold_1 StringTie exon 2135288 2135336 1000 - . gene_id "MSTRG.128"; transcript_id "MSTRG.128.4"; exon_number "3"; scaffold_1 StringTie exon 2137821 2137903 1000 - . gene_id "MSTRG.128"; transcript_id "MSTRG.128.4"; exon_number "4"; scaffold_1 StringTie exon 2138382 2138570 1000 - . gene_id "MSTRG.128"; transcript_id "MSTRG.128.4"; exon_number "5"; scaffold_1 StringTie exon 2168450 2168505 1000 + . gene_id "MSTRG.130"; transcript_id "MSTRG.130.1"; exon_number "1"; scaffold_1 StringTie exon 2168747 2168844 1000 + . gene_id "MSTRG.130"; transcript_id "MSTRG.130.1"; exon_number "2"; scaffold_1 StringTie exon 2169290 2169439 1000 + . gene_id "MSTRG.130"; transcript_id "MSTRG.130.1"; exon_number "3"; scaffold_1 StringTie exon 2169655 2169780 1000 + . gene_id "MSTRG.130"; transcript_id "MSTRG.130.1"; exon_number "4"; scaffold_1 StringTie exon 2170585 2170706 1000 + . gene_id "MSTRG.130"; transcript_id "MSTRG.130.1"; exon_number "5"; scaffold_1 StringTie exon 2741375 2741434 1000 + . gene_id "MSTRG.168"; transcript_id "MSTRG.168.1"; exon_number "1"; scaffold_1 StringTie exon 2744229 2744362 1000 + . gene_id "MSTRG.168"; transcript_id "MSTRG.168.1"; exon_number "2"; scaffold_1 StringTie exon 2744499 2744575 1000 + . gene_id "MSTRG.168"; transcript_id "MSTRG.168.1"; exon_number "3"; scaffold_1 StringTie exon 2843680 2844398 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "1"; scaffold_1 StringTie exon 2844540 2844615 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "2"; scaffold_1 StringTie exon 2845908 2845975 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "3"; scaffold_1 StringTie exon 2846292 2846339 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "4"; scaffold_1 StringTie exon 2846759 2846852 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "5"; scaffold_1 StringTie exon 2847117 2847176 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "6"; scaffold_1 StringTie exon 2847270 2847321 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "7"; scaffold_1 StringTie exon 2847444 2847501 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "8"; scaffold_1 StringTie exon 2847822 2847878 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "9"; scaffold_1 StringTie exon 2848001 2848027 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "10"; scaffold_1 StringTie exon 2848350 2848456 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "11"; scaffold_1 StringTie exon 2852651 2852735 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "12"; scaffold_1 StringTie exon 2853750 2853873 1000 - . gene_id "MSTRG.181"; transcript_id "MSTRG.181.1"; exon_number "13"; scaffold_1 StringTie exon 3362865 3362967 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "1"; scaffold_1 StringTie exon 3363063 3363172 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "2"; scaffold_1 StringTie exon 3363322 3363455 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "3"; scaffold_1 StringTie exon 3363561 3363811 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "4"; scaffold_1 StringTie exon 3364155 3364333 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "5"; scaffold_1 StringTie exon 3364519 3364686 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "6"; scaffold_1 StringTie exon 3364846 3364962 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "7"; scaffold_1 StringTie exon 3365049 3365337 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "8"; scaffold_1 StringTie exon 3365479 3365700 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "9"; scaffold_1 StringTie exon 3368478 3368648 1000 - . gene_id "MSTRG.204"; transcript_id "MSTRG.204.2"; exon_number "10"; scaffold_1 StringTie exon 3588169 3588394 1000 . . gene_id "MSTRG.211"; transcript_id "MSTRG.211.1"; exon_number "1"; scaffold_1 StringTie exon 4036993 4037211 1000 . . gene_id "MSTRG.230"; transcript_id "MSTRG.230.1"; exon_number "1"; scaffold_1 StringTie exon 4355768 4356138 1000 . . gene_id "MSTRG.245"; transcript_id "MSTRG.245.1"; exon_number "1"; scaffold_1 StringTie exon 4606127 4606152 1000 - . gene_id "MSTRG.260"; transcript_id "MSTRG.260.1"; exon_number "1"; scaffold_1 StringTie exon 4606300 4606357 1000 - . gene_id "MSTRG.260"; transcript_id "MSTRG.260.1"; exon_number "2"; scaffold_1 StringTie exon 4610662 4610859 1000 - . gene_id "MSTRG.260"; transcript_id "MSTRG.260.1"; exon_number "3"; scaffold_1 StringTie exon 4611415 4611513 1000 - . gene_id "MSTRG.260"; transcript_id "MSTRG.260.1"; exon_number "4"; scaffold_1 StringTie exon 5230554 5230879 1000 . . gene_id "MSTRG.300"; transcript_id "MSTRG.300.1"; exon_number "1"; scaffold_10 StringTie exon 155673 156453 1000 . . gene_id "MSTRG.329"; transcript_id "MSTRG.329.1"; exon_number "1"; scaffold_10 StringTie exon 720406 720719 1000 . . gene_id "MSTRG.361"; transcript_id "MSTRG.361.1"; exon_number "1"; scaffold_10 StringTie exon 1547010 1547108 1000 - . gene_id "MSTRG.425"; transcript_id "MSTRG.425.1"; exon_number "1"; scaffold_10 StringTie exon 1547401 1547493 1000 - . gene_id "MSTRG.425"; transcript_id "MSTRG.425.1"; exon_number "2"; scaffold_10 StringTie exon 1547576 1547742 1000 - . gene_id "MSTRG.425"; transcript_id "MSTRG.425.1"; exon_number "3"; scaffold_10 StringTie exon 1733526 1734144 1000 + . gene_id "MSTRG.441"; transcript_id "MSTRG.441.1"; exon_number "1"; scaffold_10 StringTie exon 1747267 1747557 1000 . . gene_id "MSTRG.442"; transcript_id "MSTRG.442.1"; exon_number "1"; scaffold_10 StringTie exon 2236663 2236862 1000 . . gene_id "MSTRG.483"; transcript_id "MSTRG.483.1"; exon_number "1"; scaffold_10 StringTie exon 3217431 3217751 1000 . . gene_id "MSTRG.546"; transcript_id "MSTRG.546.1"; exon_number "1"; scaffold_100 StringTie exon 166096 166310 1000 . . gene_id "MSTRG.554"; transcript_id "MSTRG.554.1"; exon_number "1"; scaffold_100 StringTie exon 268190 268469 1000 . . gene_id "MSTRG.561"; transcript_id "MSTRG.561.1"; exon_number "1"; scaffold_100 StringTie exon 387361 387589 1000 . . gene_id "MSTRG.566"; transcript_id "MSTRG.566.1"; exon_number "1"; scaffold_100 StringTie exon 535046 535214 1000 - . gene_id "MSTRG.579"; transcript_id "MSTRG.579.3"; exon_number "1"; scaffold_100 StringTie exon 535488 535542 1000 - . gene_id "MSTRG.579"; transcript_id "MSTRG.579.3"; exon_number "2"; scaffold_100 StringTie exon 549541 549764 1000 . . gene_id "MSTRG.580"; transcript_id "MSTRG.580.1"; exon_number "1"; scaffold_100 StringTie exon 563452 563508 1000 + . gene_id "MSTRG.582"; transcript_id "MSTRG.582.1"; exon_number "1"; scaffold_100 StringTie exon 564422 564678 1000 + . gene_id "MSTRG.582"; transcript_id "MSTRG.582.1"; exon_number "2"; scaffold_100 StringTie exon 1130001 1130229 1000 . . gene_id "MSTRG.625"; transcript_id "MSTRG.625.1"; exon_number "1"; scaffold_100 StringTie exon 1296257 1296457 1000 . . gene_id "MSTRG.640"; transcript_id "MSTRG.640.1"; exon_number "1"; scaffold_100 StringTie exon 1558003 1558206 1000 . . gene_id "MSTRG.667"; transcript_id "MSTRG.667.1"; exon_number "1"; scaffold_100 StringTie exon 1610751 1610976 1000 . . gene_id "MSTRG.672"; transcript_id "MSTRG.672.1"; exon_number "1"; scaffold_100 StringTie exon 1670707 1670731 1000 - . gene_id "MSTRG.681"; transcript_id "MSTRG.681.1"; exon_number "1"; scaffold_100 StringTie exon 1671190 1671285 1000 - . gene_id "MSTRG.681"; transcript_id "MSTRG.681.1"; exon_number "2"; scaffold_100 StringTie exon 1673537 1674161 1000 - . gene_id "MSTRG.681"; transcript_id "MSTRG.681.1"; exon_number "3"; scaffold_1000 StringTie exon 155260 156090 1000 . . gene_id "MSTRG.695"; transcript_id "MSTRG.695.1"; exon_number "1"; scaffold_1001 StringTie exon 118038 118246 1000 . . gene_id "MSTRG.730"; transcript_id "MSTRG.730.1"; exon_number "1"; scaffold_1001 StringTie exon 133541 133612 1000 - . gene_id "MSTRG.732"; transcript_id "MSTRG.732.5"; exon_number "1"; scaffold_1001 StringTie exon 148745 148929 1000 - . gene_id "MSTRG.732"; transcript_id "MSTRG.732.5"; exon_number "2"; scaffold_1001 StringTie exon 194420 194649 1000 . . gene_id "MSTRG.740"; transcript_id "MSTRG.740.1"; exon_number "1"; scaffold_1001 StringTie exon 275787 275965 1000 + . gene_id "MSTRG.751"; transcript_id "MSTRG.751.1"; exon_number "1"; scaffold_1001 StringTie exon 304209 304355 1000 + . gene_id "MSTRG.751"; transcript_id "MSTRG.751.1"; exon_number "2"; scaffold_1001 StringTie exon 320201 320431 1000 . . gene_id "MSTRG.753"; transcript_id "MSTRG.753.1"; exon_number "1"; scaffold_10011 StringTie exon 17787 18197 1000 . . gene_id "MSTRG.759"; transcript_id "MSTRG.759.1"; exon_number "1"; scaffold_1002 StringTie exon 52980 53780 1000 . . gene_id "MSTRG.784"; transcript_id "MSTRG.784.1"; exon_number "1"; scaffold_1003 StringTie exon 124016 124110 1000 + . gene_id "MSTRG.812"; transcript_id "MSTRG.812.1"; exon_number "1"; scaffold_1003 StringTie exon 134711 134839 1000 + . gene_id "MSTRG.812"; transcript_id "MSTRG.812.1"; exon_number "2"; scaffold_1003 StringTie exon 134981 135059 1000 + . gene_id "MSTRG.812"; transcript_id "MSTRG.812.1"; exon_number "3"; scaffold_1003 StringTie exon 135230 135315 1000 + . gene_id "MSTRG.812"; transcript_id "MSTRG.812.1"; exon_number "4"; scaffold_1003 StringTie exon 215882 216197 1000 . . gene_id "MSTRG.824"; transcript_id "MSTRG.824.1"; exon_number "1"; scaffold_1003 StringTie exon 217981 218185 1000 . . gene_id "MSTRG.825"; transcript_id "MSTRG.825.1"; exon_number "1"; scaffold_10032 StringTie exon 546 702 1000 - . gene_id "MSTRG.842"; transcript_id "MSTRG.842.1"; exon_number "1"; scaffold_10032 StringTie exon 1545 1686 1000 - . gene_id "MSTRG.842"; transcript_id "MSTRG.842.1"; exon_number "2"; scaffold_10032 StringTie exon 1829 1944 1000 - . gene_id "MSTRG.842"; transcript_id "MSTRG.842.1"; exon_number "3"; scaffold_10032 StringTie exon 2831 2943 1000 - . gene_id "MSTRG.842"; transcript_id "MSTRG.842.1"; exon_number "4"; scaffold_10032 StringTie exon 3224 3304 1000 - . gene_id "MSTRG.842"; transcript_id "MSTRG.842.1"; exon_number "5"; scaffold_10039 StringTie exon 22021 22252 1000 . . gene_id "MSTRG.859"; transcript_id "MSTRG.859.1"; exon_number "1"; scaffold_1004 StringTie exon 243629 243877 1000 . . gene_id "MSTRG.877"; transcript_id "MSTRG.877.1"; exon_number "1"; scaffold_10048 StringTie exon 1299 1527 1000 . . gene_id "MSTRG.905"; transcript_id "MSTRG.905.1"; exon_number "1"; scaffold_10048 StringTie exon 14629 14836 1000 . . gene_id "MSTRG.906"; transcript_id "MSTRG.906.1"; exon_number "1"; scaffold_1006 StringTie exon 134238 134456 1000 . . gene_id "MSTRG.947"; transcript_id "MSTRG.947.1"; exon_number "1"; scaffold_1006 StringTie exon 249375 250961 1000 . . gene_id "MSTRG.952"; transcript_id "MSTRG.952.1"; exon_number "1"; scaffold_10066 StringTie exon 6688 6954 1000 . . gene_id "MSTRG.974"; transcript_id "MSTRG.974.1"; exon_number "1"; scaffold_1007 StringTie exon 307093 307325 1000 . . gene_id "MSTRG.995"; transcript_id "MSTRG.995.1"; exon_number "1"; scaffold_10087 StringTie exon 13998 14205 1000 . . gene_id "MSTRG.1043"; transcript_id "MSTRG.1043.1"; exon_number "1"; scaffold_10088 StringTie exon 560 965 1000 . . gene_id "MSTRG.1044"; transcript_id "MSTRG.1044.1"; exon_number "1"; scaffold_1009 StringTie exon 207604 207615 1000 - . gene_id "MSTRG.1064"; transcript_id "MSTRG.1064.1"; exon_number "1"; scaffold_1009 StringTie exon 207735 207805 1000 - . gene_id "MSTRG.1064"; transcript_id "MSTRG.1064.1"; exon_number "2"; scaffold_1009 StringTie exon 208645 208750 1000 - . gene_id "MSTRG.1064"; transcript_id "MSTRG.1064.1"; exon_number "3"; scaffold_1009 StringTie exon 208863 208989 1000 - . gene_id "MSTRG.1064"; transcript_id "MSTRG.1064.1"; exon_number "4"; scaffold_1009 StringTie exon 267727 267781 1000 + . gene_id "MSTRG.1070"; transcript_id "MSTRG.1070.1"; exon_number "1"; scaffold_1009 StringTie exon 267928 268002 1000 + . gene_id "MSTRG.1070"; transcript_id "MSTRG.1070.1"; exon_number "2"; scaffold_1009 StringTie exon 268210 268290 1000 + . gene_id "MSTRG.1070"; transcript_id "MSTRG.1070.1"; exon_number "3"; scaffold_1009 StringTie exon 326206 326458 1000 . . gene_id "MSTRG.1079"; transcript_id "MSTRG.1079.1"; exon_number "1"; scaffold_101 StringTie exon 12881 13144 1000 . . gene_id "MSTRG.1108"; transcript_id "MSTRG.1108.1"; exon_number "1"; scaffold_101 StringTie exon 269300 270116 1000 . . gene_id "MSTRG.1130"; transcript_id "MSTRG.1130.1"; exon_number "1"; scaffold_101 StringTie exon 674351 674605 1000 . . gene_id "MSTRG.1145"; transcript_id "MSTRG.1145.1"; exon_number "1"; scaffold_101 StringTie exon 783212 783284 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "1"; scaffold_101 StringTie exon 785657 785727 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "2"; scaffold_101 StringTie exon 787630 787776 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "3"; scaffold_101 StringTie exon 788209 788278 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "4"; scaffold_101 StringTie exon 788933 788997 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "5"; scaffold_101 StringTie exon 789402 789527 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "6"; scaffold_101 StringTie exon 790220 790312 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "7"; scaffold_101 StringTie exon 791477 791572 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "8"; scaffold_101 StringTie exon 792276 792384 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "9"; scaffold_101 StringTie exon 792546 792590 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "10"; scaffold_101 StringTie exon 792695 792860 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "11"; scaffold_101 StringTie exon 793528 793717 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "12"; scaffold_101 StringTie exon 793896 793976 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "13"; scaffold_101 StringTie exon 795321 795394 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "14"; scaffold_101 StringTie exon 803768 804038 1000 - . gene_id "MSTRG.1149"; transcript_id "MSTRG.1149.2"; exon_number "15"; scaffold_101 StringTie exon 1126499 1126927 1000 . . gene_id "MSTRG.1162"; transcript_id "MSTRG.1162.1"; exon_number "1"; scaffold_101 StringTie exon 1329033 1329092 1000 + . gene_id "MSTRG.1176"; transcript_id "MSTRG.1176.1"; exon_number "1"; scaffold_101 StringTie exon 1333646 1333946 1000 + . gene_id "MSTRG.1176"; transcript_id "MSTRG.1176.1"; exon_number "2"; scaffold_1010 StringTie exon 92804 93245 1000 . . gene_id "MSTRG.1209"; transcript_id "MSTRG.1209.1"; exon_number "1"; scaffold_1010 StringTie exon 308144 308434 1000 . . gene_id "MSTRG.1217"; transcript_id "MSTRG.1217.1"; exon_number "1"; scaffold_1010 StringTie exon 309559 310839 1000 . . gene_id "MSTRG.1218"; transcript_id "MSTRG.1218.1"; exon_number "1"; scaffold_1010 StringTie exon 311171 313955 1000 . . gene_id "MSTRG.1219"; transcript_id "MSTRG.1219.1"; exon_number "1"; scaffold_1010 StringTie exon 336280 336551 1000 . . gene_id "MSTRG.1221"; transcript_id "MSTRG.1221.1"; exon_number "1"; scaffold_10103 StringTie exon 19075 19328 1000 . . gene_id "MSTRG.1236"; transcript_id "MSTRG.1236.1"; exon_number "1"; scaffold_10104 StringTie exon 7642 7902 1000 . . gene_id "MSTRG.1237"; transcript_id "MSTRG.1237.1"; exon_number "1"; scaffold_1011 StringTie exon 35567 35874 1000 . . gene_id "MSTRG.1258"; transcript_id "MSTRG.1258.1"; exon_number "1"; scaffold_1011 StringTie exon 199762 200300 1000 . . gene_id "MSTRG.1271"; transcript_id "MSTRG.1271.1"; exon_number "1"; scaffold_1012 StringTie exon 249913 250000 1000 - . gene_id "MSTRG.1301"; transcript_id "MSTRG.1301.1"; exon_number "1"; scaffold_1012 StringTie exon 251225 251369 1000 - . gene_id "MSTRG.1301"; transcript_id "MSTRG.1301.1"; exon_number "2"; scaffold_1012 StringTie exon 251525 251620 1000 - . gene_id "MSTRG.1301"; transcript_id "MSTRG.1301.1"; exon_number "3"; scaffold_1012 StringTie exon 252492 252646 1000 - . gene_id "MSTRG.1301"; transcript_id "MSTRG.1301.1"; exon_number "4"; scaffold_1012 StringTie exon 253188 253250 1000 - . gene_id "MSTRG.1301"; transcript_id "MSTRG.1301.1"; exon_number "5"; scaffold_1012 StringTie exon 253703 253817 1000 - . gene_id "MSTRG.1301"; transcript_id "MSTRG.1301.1"; exon_number "6"; scaffold_1012 StringTie exon 253998 254078 1000 - . gene_id "MSTRG.1301"; transcript_id "MSTRG.1301.1"; exon_number "7"; scaffold_1012 StringTie exon 254603 254667 1000 - . gene_id "MSTRG.1301"; transcript_id "MSTRG.1301.1"; exon_number "8"; scaffold_1013 StringTie exon 69587 71335 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "1"; scaffold_1013 StringTie exon 71729 71890 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "2"; scaffold_1013 StringTie exon 72357 72471 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "3"; scaffold_1013 StringTie exon 72966 73071 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "4"; scaffold_1013 StringTie exon 73452 73595 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "5"; scaffold_1013 StringTie exon 73902 74009 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "6"; scaffold_1013 StringTie exon 74350 74432 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "7"; scaffold_1013 StringTie exon 75356 75500 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "8"; scaffold_1013 StringTie exon 75748 75819 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "9"; scaffold_1013 StringTie exon 76040 76187 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "10"; scaffold_1013 StringTie exon 76697 77027 1000 - . gene_id "MSTRG.1332"; transcript_id "MSTRG.1332.1"; exon_number "11"; scaffold_1013 StringTie exon 152420 152763 1000 . . gene_id "MSTRG.1340"; transcript_id "MSTRG.1340.1"; exon_number "1"; scaffold_1013 StringTie exon 236068 236291 1000 . . gene_id "MSTRG.1354"; transcript_id "MSTRG.1354.1"; exon_number "1"; scaffold_10131 StringTie exon 21862 22152 1000 . . gene_id "MSTRG.1366"; transcript_id "MSTRG.1366.1"; exon_number "1"; scaffold_10134 StringTie exon 3268 3876 1000 - . gene_id "MSTRG.1370"; transcript_id "MSTRG.1370.1"; exon_number "1"; scaffold_1014 StringTie exon 11034 11477 1000 . . gene_id "MSTRG.1382"; transcript_id "MSTRG.1382.1"; exon_number "1"; scaffold_1014 StringTie exon 70928 71131 1000 . . gene_id "MSTRG.1387"; transcript_id "MSTRG.1387.1"; exon_number "1"; scaffold_1014 StringTie exon 157608 157883 1000 . . gene_id "MSTRG.1398"; transcript_id "MSTRG.1398.1"; exon_number "1"; scaffold_1014 StringTie exon 255981 256040 1000 - . gene_id "MSTRG.1406"; transcript_id "MSTRG.1406.1"; exon_number "1"; scaffold_1014 StringTie exon 256232 256372 1000 - . gene_id "MSTRG.1406"; transcript_id "MSTRG.1406.1"; exon_number "2"; scaffold_1014 StringTie exon 258012 258129 1000 - . gene_id "MSTRG.1406"; transcript_id "MSTRG.1406.1"; exon_number "3"; scaffold_1014 StringTie exon 261026 261163 1000 - . gene_id "MSTRG.1406"; transcript_id "MSTRG.1406.1"; exon_number "4"; scaffold_10156 StringTie exon 9278 9405 1000 - . gene_id "MSTRG.1467"; transcript_id "MSTRG.1467.1"; exon_number "1"; scaffold_10156 StringTie exon 9503 9609 1000 - . gene_id "MSTRG.1467"; transcript_id "MSTRG.1467.1"; exon_number "2"; scaffold_10156 StringTie exon 10114 10442 1000 - . gene_id "MSTRG.1467"; transcript_id "MSTRG.1467.1"; exon_number "3"; scaffold_1016 StringTie exon 252197 252563 1000 - . gene_id "MSTRG.1484"; transcript_id "MSTRG.1484.1"; exon_number "1"; scaffold_1016 StringTie exon 254132 254446 1000 - . gene_id "MSTRG.1484"; transcript_id "MSTRG.1484.1"; exon_number "2"; scaffold_1016 StringTie exon 283661 283880 1000 . . gene_id "MSTRG.1485"; transcript_id "MSTRG.1485.1"; exon_number "1"; scaffold_10160 StringTie exon 560 796 1000 - . gene_id "MSTRG.1489"; transcript_id "MSTRG.1489.1"; exon_number "1"; scaffold_10161 StringTie exon 7268 7596 1000 . . gene_id "MSTRG.1493"; transcript_id "MSTRG.1493.1"; exon_number "1"; scaffold_10165 StringTie exon 21486 22050 1000 . . gene_id "MSTRG.1497"; transcript_id "MSTRG.1497.1"; exon_number "1"; scaffold_10169 StringTie exon 13273 13538 1000 . . gene_id "MSTRG.1509"; transcript_id "MSTRG.1509.1"; exon_number "1"; scaffold_1017 StringTie exon 204266 204285 1000 - . gene_id "MSTRG.1545"; transcript_id "MSTRG.1545.2"; exon_number "1"; scaffold_1017 StringTie exon 204411 204528 1000 - . gene_id "MSTRG.1545"; transcript_id "MSTRG.1545.2"; exon_number "2"; scaffold_1017 StringTie exon 204997 205127 1000 - . gene_id "MSTRG.1545"; transcript_id "MSTRG.1545.2"; exon_number "3"; scaffold_1017 StringTie exon 205216 205325 1000 - . gene_id "MSTRG.1545"; transcript_id "MSTRG.1545.2"; exon_number "4"; scaffold_1017 StringTie exon 205872 206073 1000 - . gene_id "MSTRG.1545"; transcript_id "MSTRG.1545.2"; exon_number "5"; scaffold_10176 StringTie exon 1121 1172 1000 + . gene_id "MSTRG.1571"; transcript_id "MSTRG.1571.2"; exon_number "1"; scaffold_10176 StringTie exon 1302 1503 1000 + . gene_id "MSTRG.1571"; transcript_id "MSTRG.1571.2"; exon_number "2"; scaffold_10176 StringTie exon 4324 5938 1000 + . gene_id "MSTRG.1571"; transcript_id "MSTRG.1571.2"; exon_number "3"; scaffold_1018 StringTie exon 138411 138690 1000 . . gene_id "MSTRG.1587"; transcript_id "MSTRG.1587.1"; exon_number "1"; scaffold_1018 StringTie exon 160129 160713 1000 - . gene_id "MSTRG.1589"; transcript_id "MSTRG.1589.1"; exon_number "1"; scaffold_10181 StringTie exon 12816 13031 1000 . . gene_id "MSTRG.1602"; transcript_id "MSTRG.1602.1"; exon_number "1"; scaffold_10182 StringTie exon 4158 4511 1000 . . gene_id "MSTRG.1606"; transcript_id "MSTRG.1606.1"; exon_number "1"; scaffold_10182 StringTie exon 12318 12665 1000 . . gene_id "MSTRG.1608"; transcript_id "MSTRG.1608.1"; exon_number "1"; scaffold_1019 StringTie exon 28489 28637 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "1"; scaffold_1019 StringTie exon 28722 28845 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "2"; scaffold_1019 StringTie exon 29151 29285 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "3"; scaffold_1019 StringTie exon 29997 30114 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "4"; scaffold_1019 StringTie exon 30355 30456 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "5"; scaffold_1019 StringTie exon 30974 31070 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "6"; scaffold_1019 StringTie exon 31400 31562 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "7"; scaffold_1019 StringTie exon 31766 31865 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "8"; scaffold_1019 StringTie exon 33459 33495 1000 + . gene_id "MSTRG.1627"; transcript_id "MSTRG.1627.1"; exon_number "9"; scaffold_1019 StringTie exon 51744 52282 1000 - . gene_id "MSTRG.1629"; transcript_id "MSTRG.1629.1"; exon_number "1"; scaffold_1019 StringTie exon 55842 56065 1000 . . gene_id "MSTRG.1630"; transcript_id "MSTRG.1630.1"; exon_number "1"; scaffold_1019 StringTie exon 94895 95217 1000 . . gene_id "MSTRG.1632"; transcript_id "MSTRG.1632.1"; exon_number "1"; scaffold_1019 StringTie exon 109526 110495 1000 . . gene_id "MSTRG.1633"; transcript_id "MSTRG.1633.1"; exon_number "1"; scaffold_1019 StringTie exon 237928 239089 1000 - . gene_id "MSTRG.1646"; transcript_id "MSTRG.1646.1"; exon_number "1"; scaffold_1019 StringTie exon 240110 240278 1000 - . gene_id "MSTRG.1646"; transcript_id "MSTRG.1646.1"; exon_number "2"; scaffold_1019 StringTie exon 253598 253680 1000 - . gene_id "MSTRG.1646"; transcript_id "MSTRG.1646.1"; exon_number "3"; scaffold_1019 StringTie exon 258853 258935 1000 - . gene_id "MSTRG.1646"; transcript_id "MSTRG.1646.1"; exon_number "4"; scaffold_1019 StringTie exon 259313 259601 1000 - . gene_id "MSTRG.1646"; transcript_id "MSTRG.1646.1"; exon_number "5"; scaffold_102 StringTie exon 152714 152915 1000 . . gene_id "MSTRG.1670"; transcript_id "MSTRG.1670.1"; exon_number "1"; scaffold_102 StringTie exon 452660 452874 1000 . . gene_id "MSTRG.1712"; transcript_id "MSTRG.1712.1"; exon_number "1"; scaffold_102 StringTie exon 518598 518918 1000 . . gene_id "MSTRG.1723"; transcript_id "MSTRG.1723.1"; exon_number "1"; scaffold_102 StringTie exon 969563 969836 1000 . . gene_id "MSTRG.1753"; transcript_id "MSTRG.1753.1"; exon_number "1"; scaffold_102 StringTie exon 1233691 1233927 1000 . . gene_id "MSTRG.1767"; transcript_id "MSTRG.1767.1"; exon_number "1"; scaffold_1020 StringTie exon 35930 36134 1000 . . gene_id "MSTRG.1804"; transcript_id "MSTRG.1804.1"; exon_number "1"; scaffold_1020 StringTie exon 79715 79998 1000 . . gene_id "MSTRG.1807"; transcript_id "MSTRG.1807.1"; exon_number "1"; scaffold_10201 StringTie exon 19469 19773 1000 . . gene_id "MSTRG.1826"; transcript_id "MSTRG.1826.1"; exon_number "1"; scaffold_10205 StringTie exon 528 584 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "1"; scaffold_10205 StringTie exon 712 875 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "2"; scaffold_10205 StringTie exon 1029 1084 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "3"; scaffold_10205 StringTie exon 1254 1326 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "4"; scaffold_10205 StringTie exon 3725 3908 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "5"; scaffold_10205 StringTie exon 4013 4101 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "6"; scaffold_10205 StringTie exon 5015 5131 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "7"; scaffold_10205 StringTie exon 5224 5325 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "8"; scaffold_10205 StringTie exon 5615 5809 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "9"; scaffold_10205 StringTie exon 6073 6220 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "10"; scaffold_10205 StringTie exon 6369 6455 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "11"; scaffold_10205 StringTie exon 6602 6709 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "12"; scaffold_10205 StringTie exon 6852 6988 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "13"; scaffold_10205 StringTie exon 7075 7185 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "14"; scaffold_10205 StringTie exon 7324 7382 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "15"; scaffold_10205 StringTie exon 7478 7508 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "16"; scaffold_10205 StringTie exon 7609 7671 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "17"; scaffold_10205 StringTie exon 16293 16393 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "18"; scaffold_10205 StringTie exon 16520 16625 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "19"; scaffold_10205 StringTie exon 16757 16880 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "20"; scaffold_10205 StringTie exon 16979 17040 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "21"; scaffold_10205 StringTie exon 17140 17367 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "22"; scaffold_10205 StringTie exon 17538 18927 1000 + . gene_id "MSTRG.1832"; transcript_id "MSTRG.1832.1"; exon_number "23"; scaffold_1021 StringTie exon 41685 41807 1000 + . gene_id "MSTRG.1841"; transcript_id "MSTRG.1841.1"; exon_number "1"; scaffold_1021 StringTie exon 42117 42314 1000 + . gene_id "MSTRG.1841"; transcript_id "MSTRG.1841.1"; exon_number "2"; scaffold_1021 StringTie exon 42443 42509 1000 + . gene_id "MSTRG.1841"; transcript_id "MSTRG.1841.1"; exon_number "3"; scaffold_1021 StringTie exon 42611 42708 1000 + . gene_id "MSTRG.1841"; transcript_id "MSTRG.1841.1"; exon_number "4"; scaffold_1021 StringTie exon 45127 45158 1000 + . gene_id "MSTRG.1841"; transcript_id "MSTRG.1841.1"; exon_number "5"; scaffold_1021 StringTie exon 149263 149463 1000 . . gene_id "MSTRG.1861"; transcript_id "MSTRG.1861.1"; exon_number "1"; scaffold_1021 StringTie exon 176981 177253 1000 . . gene_id "MSTRG.1865"; transcript_id "MSTRG.1865.1"; exon_number "1"; scaffold_1021 StringTie exon 235715 236080 1000 - . gene_id "MSTRG.1873"; transcript_id "MSTRG.1873.1"; exon_number "1"; scaffold_1021 StringTie exon 236233 236406 1000 - . gene_id "MSTRG.1873"; transcript_id "MSTRG.1873.1"; exon_number "2"; scaffold_1021 StringTie exon 236708 236901 1000 - . gene_id "MSTRG.1873"; transcript_id "MSTRG.1873.1"; exon_number "3"; scaffold_1021 StringTie exon 238404 238457 1000 - . gene_id "MSTRG.1873"; transcript_id "MSTRG.1873.1"; exon_number "4"; scaffold_1021 StringTie exon 238706 238735 1000 - . gene_id "MSTRG.1873"; transcript_id "MSTRG.1873.1"; exon_number "5"; scaffold_1021 StringTie exon 238888 239024 1000 - . gene_id "MSTRG.1873"; transcript_id "MSTRG.1873.1"; exon_number "6"; scaffold_1021 StringTie exon 269720 269917 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "1"; scaffold_1021 StringTie exon 270127 270265 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "2"; scaffold_1021 StringTie exon 270356 270446 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "3"; scaffold_1021 StringTie exon 270571 270623 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "4"; scaffold_1021 StringTie exon 270942 271023 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "5"; scaffold_1021 StringTie exon 271156 271278 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "6"; scaffold_1021 StringTie exon 271398 271502 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "7"; scaffold_1021 StringTie exon 271611 271682 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "8"; scaffold_1021 StringTie exon 271979 272089 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "9"; scaffold_1021 StringTie exon 272223 272300 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "10"; scaffold_1021 StringTie exon 272408 272496 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "11"; scaffold_1021 StringTie exon 272612 272633 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "12"; scaffold_1021 StringTie exon 273454 273585 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "13"; scaffold_1021 StringTie exon 276875 277008 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "14"; scaffold_1021 StringTie exon 277102 277386 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "15"; scaffold_1021 StringTie exon 277902 279774 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "16"; scaffold_1021 StringTie exon 280303 280557 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "17"; scaffold_1021 StringTie exon 280672 280758 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "18"; scaffold_1021 StringTie exon 280860 280993 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "19"; scaffold_1021 StringTie exon 281955 282100 1000 - . gene_id "MSTRG.1876"; transcript_id "MSTRG.1876.1"; exon_number "20"; scaffold_1021 StringTie exon 354247 354662 1000 . . gene_id "MSTRG.1883"; transcript_id "MSTRG.1883.1"; exon_number "1"; scaffold_10223 StringTie exon 17920 18040 1000 + . gene_id "MSTRG.1918"; transcript_id "MSTRG.1918.1"; exon_number "1"; scaffold_10223 StringTie exon 18329 18842 1000 + . gene_id "MSTRG.1918"; transcript_id "MSTRG.1918.1"; exon_number "2"; scaffold_10224 StringTie exon 18453 18798 1000 . . gene_id "MSTRG.1925"; transcript_id "MSTRG.1925.1"; exon_number "1"; scaffold_10225 StringTie exon 7233 7432 1000 . . gene_id "MSTRG.1928"; transcript_id "MSTRG.1928.1"; exon_number "1"; scaffold_1023 StringTie exon 36 768 1000 . . gene_id "MSTRG.1934"; transcript_id "MSTRG.1934.1"; exon_number "1"; scaffold_1023 StringTie exon 235386 235769 1000 . . gene_id "MSTRG.1948"; transcript_id "MSTRG.1948.1"; exon_number "1"; scaffold_1023 StringTie exon 345090 345324 1000 . . gene_id "MSTRG.1958"; transcript_id "MSTRG.1958.1"; exon_number "1"; scaffold_1024 StringTie exon 29672 29893 1000 . . gene_id "MSTRG.1971"; transcript_id "MSTRG.1971.1"; exon_number "1"; scaffold_1025 StringTie exon 97703 97912 1000 . . gene_id "MSTRG.2015"; transcript_id "MSTRG.2015.1"; exon_number "1"; scaffold_1025 StringTie exon 133329 133589 1000 . . gene_id "MSTRG.2022"; transcript_id "MSTRG.2022.1"; exon_number "1"; scaffold_1025 StringTie exon 288885 289100 1000 . . gene_id "MSTRG.2028"; transcript_id "MSTRG.2028.1"; exon_number "1"; scaffold_10258 StringTie exon 863 1075 1000 . . gene_id "MSTRG.2061"; transcript_id "MSTRG.2061.1"; exon_number "1"; scaffold_1026 StringTie exon 64065 64508 1000 . . gene_id "MSTRG.2076"; transcript_id "MSTRG.2076.1"; exon_number "1"; scaffold_1026 StringTie exon 67151 67458 1000 . . gene_id "MSTRG.2079"; transcript_id "MSTRG.2079.1"; exon_number "1"; scaffold_1026 StringTie exon 229371 229709 1000 . . gene_id "MSTRG.2088"; transcript_id "MSTRG.2088.1"; exon_number "1"; scaffold_10261 StringTie exon 12837 13046 1000 . . gene_id "MSTRG.2099"; transcript_id "MSTRG.2099.1"; exon_number "1"; scaffold_10266 StringTie exon 126 539 1000 . . gene_id "MSTRG.2109"; transcript_id "MSTRG.2109.1"; exon_number "1"; scaffold_10272 StringTie exon 6034 6304 1000 . . gene_id "MSTRG.2142"; transcript_id "MSTRG.2142.1"; exon_number "1"; scaffold_1028 StringTie exon 69870 70082 1000 . . gene_id "MSTRG.2165"; transcript_id "MSTRG.2165.1"; exon_number "1"; scaffold_1028 StringTie exon 234251 234580 1000 . . gene_id "MSTRG.2175"; transcript_id "MSTRG.2175.1"; exon_number "1"; scaffold_1028 StringTie exon 237798 238071 1000 . . gene_id "MSTRG.2176"; transcript_id "MSTRG.2176.1"; exon_number "1"; scaffold_10280 StringTie exon 64 372 1000 . . gene_id "MSTRG.2183"; transcript_id "MSTRG.2183.1"; exon_number "1"; scaffold_10290 StringTie exon 15119 15338 1000 . . gene_id "MSTRG.2226"; transcript_id "MSTRG.2226.1"; exon_number "1"; scaffold_10298 StringTie exon 940 1289 1000 . . gene_id "MSTRG.2234"; transcript_id "MSTRG.2234.1"; exon_number "1"; scaffold_103 StringTie exon 265224 265430 1000 . . gene_id "MSTRG.2251"; transcript_id "MSTRG.2251.1"; exon_number "1"; scaffold_103 StringTie exon 309223 309439 1000 . . gene_id "MSTRG.2256"; transcript_id "MSTRG.2256.1"; exon_number "1"; scaffold_103 StringTie exon 1046544 1046841 1000 . . gene_id "MSTRG.2295"; transcript_id "MSTRG.2295.1"; exon_number "1"; scaffold_103 StringTie exon 1100995 1101451 1000 . . gene_id "MSTRG.2298"; transcript_id "MSTRG.2298.1"; exon_number "1"; scaffold_103 StringTie exon 1524014 1524246 1000 . . gene_id "MSTRG.2315"; transcript_id "MSTRG.2315.1"; exon_number "1"; scaffold_103 StringTie exon 1610141 1610677 1000 . . gene_id "MSTRG.2319"; transcript_id "MSTRG.2319.1"; exon_number "1"; scaffold_1030 StringTie exon 31790 32128 1000 . . gene_id "MSTRG.2326"; transcript_id "MSTRG.2326.1"; exon_number "1"; scaffold_1030 StringTie exon 262564 262695 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "1"; scaffold_1030 StringTie exon 263935 264001 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "2"; scaffold_1030 StringTie exon 264090 264116 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "3"; scaffold_1030 StringTie exon 264284 264454 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "4"; scaffold_1030 StringTie exon 264598 264746 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "5"; scaffold_1030 StringTie exon 265371 265466 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "6"; scaffold_1030 StringTie exon 265580 265658 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "7"; scaffold_1030 StringTie exon 265820 265983 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "8"; scaffold_1030 StringTie exon 266760 267281 1000 + . gene_id "MSTRG.2340"; transcript_id "MSTRG.2340.1"; exon_number "9"; scaffold_1030 StringTie exon 321090 321504 1000 - . gene_id "MSTRG.2344"; transcript_id "MSTRG.2344.1"; exon_number "1"; scaffold_1030 StringTie exon 321767 321844 1000 - . gene_id "MSTRG.2344"; transcript_id "MSTRG.2344.1"; exon_number "2"; scaffold_1030 StringTie exon 321955 322072 1000 - . gene_id "MSTRG.2344"; transcript_id "MSTRG.2344.1"; exon_number "3"; scaffold_1030 StringTie exon 362849 363052 1000 . . gene_id "MSTRG.2348"; transcript_id "MSTRG.2348.1"; exon_number "1"; scaffold_10305 StringTie exon 4209 4437 1000 . . gene_id "MSTRG.2357"; transcript_id "MSTRG.2357.1"; exon_number "1"; scaffold_1031 StringTie exon 190625 190759 1000 + . gene_id "MSTRG.2391"; transcript_id "MSTRG.2391.1"; exon_number "1"; scaffold_1031 StringTie exon 190933 191010 1000 + . gene_id "MSTRG.2391"; transcript_id "MSTRG.2391.1"; exon_number "2"; scaffold_1031 StringTie exon 191228 191419 1000 + . gene_id "MSTRG.2391"; transcript_id "MSTRG.2391.1"; exon_number "3"; scaffold_1031 StringTie exon 192850 192888 1000 + . gene_id "MSTRG.2391"; transcript_id "MSTRG.2391.1"; exon_number "4"; scaffold_1031 StringTie exon 193046 193152 1000 + . gene_id "MSTRG.2391"; transcript_id "MSTRG.2391.1"; exon_number "5"; scaffold_1031 StringTie exon 193354 193397 1000 + . gene_id "MSTRG.2391"; transcript_id "MSTRG.2391.1"; exon_number "6"; scaffold_1031 StringTie exon 194551 194623 1000 + . gene_id "MSTRG.2391"; transcript_id "MSTRG.2391.1"; exon_number "7"; scaffold_1031 StringTie exon 203238 203793 1000 - . gene_id "MSTRG.2393"; transcript_id "MSTRG.2393.1"; exon_number "1"; scaffold_1031 StringTie exon 311196 311429 1000 . . gene_id "MSTRG.2394"; transcript_id "MSTRG.2394.1"; exon_number "1"; scaffold_10317 StringTie exon 19865 20218 1000 . . gene_id "MSTRG.2413"; transcript_id "MSTRG.2413.1"; exon_number "1"; scaffold_1032 StringTie exon 75781 75989 1000 . . gene_id "MSTRG.2417"; transcript_id "MSTRG.2417.1"; exon_number "1"; scaffold_10321 StringTie exon 19079 19459 1000 . . gene_id "MSTRG.2441"; transcript_id "MSTRG.2441.1"; exon_number "1"; scaffold_10327 StringTie exon 13226 13758 1000 . . gene_id "MSTRG.2446"; transcript_id "MSTRG.2446.1"; exon_number "1"; scaffold_1033 StringTie exon 41835 42050 1000 + . gene_id "MSTRG.2461"; transcript_id "MSTRG.2461.1"; exon_number "1"; scaffold_1033 StringTie exon 59050 59231 1000 - . gene_id "MSTRG.2467"; transcript_id "MSTRG.2467.1"; exon_number "1"; scaffold_1033 StringTie exon 59404 59430 1000 - . gene_id "MSTRG.2467"; transcript_id "MSTRG.2467.1"; exon_number "2"; scaffold_10331 StringTie exon 3804 5016 1000 . . gene_id "MSTRG.2489"; transcript_id "MSTRG.2489.1"; exon_number "1"; scaffold_10331 StringTie exon 8559 8636 1000 - . gene_id "MSTRG.2490"; transcript_id "MSTRG.2490.1"; exon_number "1"; scaffold_10331 StringTie exon 8848 9026 1000 - . gene_id "MSTRG.2490"; transcript_id "MSTRG.2490.1"; exon_number "2"; scaffold_10331 StringTie exon 9148 9188 1000 - . gene_id "MSTRG.2490"; transcript_id "MSTRG.2490.1"; exon_number "3"; scaffold_10331 StringTie exon 9272 9359 1000 - . gene_id "MSTRG.2490"; transcript_id "MSTRG.2490.1"; exon_number "4"; scaffold_10331 StringTie exon 12674 12816 1000 - . gene_id "MSTRG.2490"; transcript_id "MSTRG.2490.1"; exon_number "5"; scaffold_10331 StringTie exon 13500 13605 1000 - . gene_id "MSTRG.2490"; transcript_id "MSTRG.2490.1"; exon_number "6"; scaffold_10331 StringTie exon 13823 13923 1000 - . gene_id "MSTRG.2490"; transcript_id "MSTRG.2490.1"; exon_number "7"; scaffold_10332 StringTie exon 13534 13977 1000 . . gene_id "MSTRG.2493"; transcript_id "MSTRG.2493.1"; exon_number "1"; scaffold_10339 StringTie exon 3379 3980 1000 - . gene_id "MSTRG.2501"; transcript_id "MSTRG.2501.1"; exon_number "1"; scaffold_10339 StringTie exon 4148 4251 1000 - . gene_id "MSTRG.2501"; transcript_id "MSTRG.2501.1"; exon_number "2"; scaffold_10339 StringTie exon 4466 4543 1000 - . gene_id "MSTRG.2501"; transcript_id "MSTRG.2501.1"; exon_number "3"; scaffold_10339 StringTie exon 4940 5000 1000 - . gene_id "MSTRG.2501"; transcript_id "MSTRG.2501.1"; exon_number "4"; scaffold_10339 StringTie exon 5302 5476 1000 - . gene_id "MSTRG.2501"; transcript_id "MSTRG.2501.1"; exon_number "5"; scaffold_10339 StringTie exon 5874 6011 1000 - . gene_id "MSTRG.2501"; transcript_id "MSTRG.2501.1"; exon_number "6"; scaffold_10339 StringTie exon 6501 6573 1000 - . gene_id "MSTRG.2501"; transcript_id "MSTRG.2501.1"; exon_number "7"; scaffold_10339 StringTie exon 10549 10676 1000 - . gene_id "MSTRG.2501"; transcript_id "MSTRG.2501.1"; exon_number "8"; scaffold_1034 StringTie exon 114805 115055 1000 . . gene_id "MSTRG.2513"; transcript_id "MSTRG.2513.1"; exon_number "1"; scaffold_1034 StringTie exon 154277 154485 1000 . . gene_id "MSTRG.2516"; transcript_id "MSTRG.2516.1"; exon_number "1"; scaffold_1034 StringTie exon 189966 190374 1000 . . gene_id "MSTRG.2519"; transcript_id "MSTRG.2519.1"; exon_number "1"; scaffold_1034 StringTie exon 208099 208827 1000 . . gene_id "MSTRG.2522"; transcript_id "MSTRG.2522.1"; exon_number "1"; scaffold_10340 StringTie exon 11047 11264 1000 . . gene_id "MSTRG.2532"; transcript_id "MSTRG.2532.1"; exon_number "1"; scaffold_10351 StringTie exon 526 761 1000 . . gene_id "MSTRG.2568"; transcript_id "MSTRG.2568.1"; exon_number "1"; scaffold_10359 StringTie exon 18645 18858 1000 . . gene_id "MSTRG.2586"; transcript_id "MSTRG.2586.1"; exon_number "1"; scaffold_1036 StringTie exon 276685 276987 1000 . . gene_id "MSTRG.2599"; transcript_id "MSTRG.2599.1"; exon_number "1"; scaffold_1036 StringTie exon 279557 279857 1000 . . gene_id "MSTRG.2600"; transcript_id "MSTRG.2600.1"; exon_number "1"; scaffold_10361 StringTie exon 14750 15341 1000 . . gene_id "MSTRG.2609"; transcript_id "MSTRG.2609.1"; exon_number "1"; scaffold_10364 StringTie exon 16054 16425 1000 + . gene_id "MSTRG.2616"; transcript_id "MSTRG.2616.1"; exon_number "1"; scaffold_10364 StringTie exon 20411 20424 1000 + . gene_id "MSTRG.2616"; transcript_id "MSTRG.2616.1"; exon_number "2"; scaffold_10367 StringTie exon 9614 9684 1000 - . gene_id "MSTRG.2623"; transcript_id "MSTRG.2623.1"; exon_number "1"; scaffold_10367 StringTie exon 10148 10343 1000 - . gene_id "MSTRG.2623"; transcript_id "MSTRG.2623.1"; exon_number "2"; scaffold_10367 StringTie exon 16687 16758 1000 - . gene_id "MSTRG.2623"; transcript_id "MSTRG.2623.1"; exon_number "3"; scaffold_10370 StringTie exon 3059 3313 1000 . . gene_id "MSTRG.2660"; transcript_id "MSTRG.2660.1"; exon_number "1"; scaffold_1038 StringTie exon 145428 145918 1000 - . gene_id "MSTRG.2687"; transcript_id "MSTRG.2687.1"; exon_number "1"; scaffold_1038 StringTie exon 146031 146128 1000 - . gene_id "MSTRG.2687"; transcript_id "MSTRG.2687.1"; exon_number "2"; scaffold_1038 StringTie exon 146341 146445 1000 - . gene_id "MSTRG.2687"; transcript_id "MSTRG.2687.1"; exon_number "3"; scaffold_1038 StringTie exon 253892 254114 1000 . . gene_id "MSTRG.2692"; transcript_id "MSTRG.2692.1"; exon_number "1"; scaffold_1038 StringTie exon 307533 307752 1000 . . gene_id "MSTRG.2695"; transcript_id "MSTRG.2695.1"; exon_number "1"; scaffold_104 StringTie exon 143766 144423 1000 . . gene_id "MSTRG.2761"; transcript_id "MSTRG.2761.1"; exon_number "1"; scaffold_104 StringTie exon 237359 237675 1000 . . gene_id "MSTRG.2766"; transcript_id "MSTRG.2766.1"; exon_number "1"; scaffold_104 StringTie exon 355561 355830 1000 - . gene_id "MSTRG.2778"; transcript_id "MSTRG.2778.1"; exon_number "1"; scaffold_104 StringTie exon 356022 356126 1000 - . gene_id "MSTRG.2778"; transcript_id "MSTRG.2778.1"; exon_number "2"; scaffold_104 StringTie exon 358058 358179 1000 - . gene_id "MSTRG.2778"; transcript_id "MSTRG.2778.1"; exon_number "3"; scaffold_104 StringTie exon 358368 358501 1000 - . gene_id "MSTRG.2778"; transcript_id "MSTRG.2778.1"; exon_number "4"; scaffold_104 StringTie exon 359375 359388 1000 - . gene_id "MSTRG.2778"; transcript_id "MSTRG.2778.1"; exon_number "5"; scaffold_104 StringTie exon 581973 582223 1000 . . gene_id "MSTRG.2808"; transcript_id "MSTRG.2808.1"; exon_number "1"; scaffold_104 StringTie exon 997651 997851 1000 . . gene_id "MSTRG.2825"; transcript_id "MSTRG.2825.1"; exon_number "1"; scaffold_104 StringTie exon 1022267 1022486 1000 . . gene_id "MSTRG.2827"; transcript_id "MSTRG.2827.1"; exon_number "1"; scaffold_104 StringTie exon 1193331 1194255 1000 - . gene_id "MSTRG.2845"; transcript_id "MSTRG.2845.1"; exon_number "1"; scaffold_104 StringTie exon 1194429 1194865 1000 - . gene_id "MSTRG.2845"; transcript_id "MSTRG.2845.1"; exon_number "2"; scaffold_104 StringTie exon 1196876 1197103 1000 - . gene_id "MSTRG.2845"; transcript_id "MSTRG.2845.1"; exon_number "3"; scaffold_104 StringTie exon 1197744 1197812 1000 - . gene_id "MSTRG.2845"; transcript_id "MSTRG.2845.1"; exon_number "4"; scaffold_104 StringTie exon 1199722 1199815 1000 - . gene_id "MSTRG.2845"; transcript_id "MSTRG.2845.1"; exon_number "5"; scaffold_104 StringTie exon 1366110 1366396 1000 . . gene_id "MSTRG.2851"; transcript_id "MSTRG.2851.1"; exon_number "1"; scaffold_104 StringTie exon 1465063 1465144 1000 + . gene_id "MSTRG.2861"; transcript_id "MSTRG.2861.1"; exon_number "1"; scaffold_104 StringTie exon 1465340 1465377 1000 + . gene_id "MSTRG.2861"; transcript_id "MSTRG.2861.1"; exon_number "2"; scaffold_104 StringTie exon 1468492 1468571 1000 + . gene_id "MSTRG.2861"; transcript_id "MSTRG.2861.1"; exon_number "3"; scaffold_104 StringTie exon 1468680 1468732 1000 + . gene_id "MSTRG.2861"; transcript_id "MSTRG.2861.1"; exon_number "4"; scaffold_104 StringTie exon 1547078 1547339 1000 . . gene_id "MSTRG.2869"; transcript_id "MSTRG.2869.1"; exon_number "1"; scaffold_1040 StringTie exon 173138 173359 1000 . . gene_id "MSTRG.2887"; transcript_id "MSTRG.2887.1"; exon_number "1"; scaffold_1040 StringTie exon 264104 264221 1000 - . gene_id "MSTRG.2892"; transcript_id "MSTRG.2892.1"; exon_number "1"; scaffold_1040 StringTie exon 264434 264582 1000 - . gene_id "MSTRG.2892"; transcript_id "MSTRG.2892.1"; exon_number "2"; scaffold_1040 StringTie exon 264739 264801 1000 - . gene_id "MSTRG.2892"; transcript_id "MSTRG.2892.1"; exon_number "3"; scaffold_10401 StringTie exon 16624 17030 1000 . . gene_id "MSTRG.2899"; transcript_id "MSTRG.2899.1"; exon_number "1"; scaffold_10409 StringTie exon 7240 7395 1000 - . gene_id "MSTRG.2920"; transcript_id "MSTRG.2920.2"; exon_number "1"; scaffold_10409 StringTie exon 9734 9856 1000 - . gene_id "MSTRG.2920"; transcript_id "MSTRG.2920.2"; exon_number "2"; scaffold_10409 StringTie exon 11372 11524 1000 - . gene_id "MSTRG.2920"; transcript_id "MSTRG.2920.2"; exon_number "3"; scaffold_10409 StringTie exon 12369 12484 1000 - . gene_id "MSTRG.2920"; transcript_id "MSTRG.2920.2"; exon_number "4"; scaffold_1041 StringTie exon 76362 76668 1000 - . gene_id "MSTRG.2924"; transcript_id "MSTRG.2924.1"; exon_number "1"; scaffold_1041 StringTie exon 222539 222587 1000 - . gene_id "MSTRG.2940"; transcript_id "MSTRG.2940.1"; exon_number "1"; scaffold_1041 StringTie exon 222706 222785 1000 - . gene_id "MSTRG.2940"; transcript_id "MSTRG.2940.1"; exon_number "2"; scaffold_1041 StringTie exon 223063 223311 1000 - . gene_id "MSTRG.2940"; transcript_id "MSTRG.2940.1"; exon_number "3"; scaffold_1041 StringTie exon 223994 224080 1000 - . gene_id "MSTRG.2940"; transcript_id "MSTRG.2940.1"; exon_number "4"; scaffold_1041 StringTie exon 262836 263112 1000 . . gene_id "MSTRG.2946"; transcript_id "MSTRG.2946.1"; exon_number "1"; scaffold_10412 StringTie exon 1457 2761 1000 - . gene_id "MSTRG.2954"; transcript_id "MSTRG.2954.2"; exon_number "1"; scaffold_10412 StringTie exon 3372 3473 1000 - . gene_id "MSTRG.2954"; transcript_id "MSTRG.2954.2"; exon_number "2"; scaffold_10412 StringTie exon 1457 2761 1000 - . gene_id "MSTRG.2954"; transcript_id "MSTRG.2954.3"; exon_number "1"; scaffold_10412 StringTie exon 8252 8283 1000 - . gene_id "MSTRG.2954"; transcript_id "MSTRG.2954.3"; exon_number "2"; scaffold_10424 StringTie exon 20472 20678 1000 . . gene_id "MSTRG.3022"; transcript_id "MSTRG.3022.1"; exon_number "1"; scaffold_10425 StringTie exon 20833 21349 1000 . . gene_id "MSTRG.3025"; transcript_id "MSTRG.3025.1"; exon_number "1"; scaffold_1043 StringTie exon 41215 41440 1000 . . gene_id "MSTRG.3032"; transcript_id "MSTRG.3032.1"; exon_number "1"; scaffold_1043 StringTie exon 256702 257153 1000 - . gene_id "MSTRG.3042"; transcript_id "MSTRG.3042.1"; exon_number "1"; scaffold_1043 StringTie exon 257301 257359 1000 - . gene_id "MSTRG.3042"; transcript_id "MSTRG.3042.1"; exon_number "2"; scaffold_1043 StringTie exon 280696 281185 1000 . . gene_id "MSTRG.3044"; transcript_id "MSTRG.3044.1"; exon_number "1"; scaffold_10430 StringTie exon 2337 2592 1000 . . gene_id "MSTRG.3049"; transcript_id "MSTRG.3049.1"; exon_number "1"; scaffold_10438 StringTie exon 2779 3098 1000 . . gene_id "MSTRG.3057"; transcript_id "MSTRG.3057.1"; exon_number "1"; scaffold_1044 StringTie exon 297935 298214 1000 . . gene_id "MSTRG.3070"; transcript_id "MSTRG.3070.1"; exon_number "1"; scaffold_1044 StringTie exon 321443 321664 1000 . . gene_id "MSTRG.3076"; transcript_id "MSTRG.3076.1"; exon_number "1"; scaffold_10441 StringTie exon 5400 5882 1000 . . gene_id "MSTRG.3083"; transcript_id "MSTRG.3083.1"; exon_number "1"; scaffold_1045 StringTie exon 178517 178954 1000 + . gene_id "MSTRG.3109"; transcript_id "MSTRG.3109.1"; exon_number "1"; scaffold_1045 StringTie exon 184176 184360 1000 + . gene_id "MSTRG.3109"; transcript_id "MSTRG.3109.1"; exon_number "2"; scaffold_1045 StringTie exon 184846 184916 1000 + . gene_id "MSTRG.3109"; transcript_id "MSTRG.3109.1"; exon_number "3"; scaffold_1045 StringTie exon 185020 185205 1000 + . gene_id "MSTRG.3109"; transcript_id "MSTRG.3109.1"; exon_number "4"; scaffold_1045 StringTie exon 185466 185618 1000 + . gene_id "MSTRG.3109"; transcript_id "MSTRG.3109.1"; exon_number "5"; scaffold_1045 StringTie exon 185907 186037 1000 + . gene_id "MSTRG.3109"; transcript_id "MSTRG.3109.1"; exon_number "6"; scaffold_1045 StringTie exon 186780 186868 1000 + . gene_id "MSTRG.3109"; transcript_id "MSTRG.3109.1"; exon_number "7"; scaffold_1045 StringTie exon 230233 230495 1000 . . gene_id "MSTRG.3116"; transcript_id "MSTRG.3116.1"; exon_number "1"; scaffold_10457 StringTie exon 15175 15532 1000 . . gene_id "MSTRG.3140"; transcript_id "MSTRG.3140.1"; exon_number "1"; scaffold_10457 StringTie exon 15832 15924 1000 + . gene_id "MSTRG.3141"; transcript_id "MSTRG.3141.1"; exon_number "1"; scaffold_10457 StringTie exon 16000 16123 1000 + . gene_id "MSTRG.3141"; transcript_id "MSTRG.3141.1"; exon_number "2"; scaffold_1046 StringTie exon 327003 327269 1000 . . gene_id "MSTRG.3163"; transcript_id "MSTRG.3163.1"; exon_number "1"; scaffold_1047 StringTie exon 175562 175622 1000 - . gene_id "MSTRG.3197"; transcript_id "MSTRG.3197.1"; exon_number "1"; scaffold_1047 StringTie exon 176205 176392 1000 - . gene_id "MSTRG.3197"; transcript_id "MSTRG.3197.1"; exon_number "2"; scaffold_10474 StringTie exon 18780 18992 1000 + . gene_id "MSTRG.3223"; transcript_id "MSTRG.3223.1"; exon_number "1"; scaffold_10474 StringTie exon 19231 19306 1000 + . gene_id "MSTRG.3223"; transcript_id "MSTRG.3223.1"; exon_number "2"; scaffold_1048 StringTie exon 80849 81068 1000 . . gene_id "MSTRG.3235"; transcript_id "MSTRG.3235.1"; exon_number "1"; scaffold_10481 StringTie exon 29 252 1000 - . gene_id "MSTRG.3254"; transcript_id "MSTRG.3254.1"; exon_number "1"; scaffold_10481 StringTie exon 3056 3118 1000 - . gene_id "MSTRG.3254"; transcript_id "MSTRG.3254.1"; exon_number "2"; scaffold_10481 StringTie exon 3898 4242 1000 - . gene_id "MSTRG.3254"; transcript_id "MSTRG.3254.1"; exon_number "3"; scaffold_10490 StringTie exon 11103 11313 1000 . . gene_id "MSTRG.3283"; transcript_id "MSTRG.3283.1"; exon_number "1"; scaffold_10490 StringTie exon 20277 20817 1000 . . gene_id "MSTRG.3284"; transcript_id "MSTRG.3284.1"; exon_number "1"; scaffold_10491 StringTie exon 17874 18097 1000 . . gene_id "MSTRG.3285"; transcript_id "MSTRG.3285.1"; exon_number "1"; scaffold_10496 StringTie exon 20503 20713 1000 . . gene_id "MSTRG.3293"; transcript_id "MSTRG.3293.1"; exon_number "1"; scaffold_105 StringTie exon 79886 80262 1000 . . gene_id "MSTRG.3302"; transcript_id "MSTRG.3302.1"; exon_number "1"; scaffold_105 StringTie exon 375866 376107 1000 . . gene_id "MSTRG.3312"; transcript_id "MSTRG.3312.1"; exon_number "1"; scaffold_105 StringTie exon 517478 517826 1000 . . gene_id "MSTRG.3323"; transcript_id "MSTRG.3323.1"; exon_number "1"; scaffold_105 StringTie exon 819812 820052 1000 . . gene_id "MSTRG.3342"; transcript_id "MSTRG.3342.1"; exon_number "1"; scaffold_1050 StringTie exon 88211 88419 1000 . . gene_id "MSTRG.3388"; transcript_id "MSTRG.3388.1"; exon_number "1"; scaffold_1050 StringTie exon 97839 98040 1000 . . gene_id "MSTRG.3389"; transcript_id "MSTRG.3389.1"; exon_number "1"; scaffold_1050 StringTie exon 114484 114544 1000 + . gene_id "MSTRG.3391"; transcript_id "MSTRG.3391.1"; exon_number "1"; scaffold_1050 StringTie exon 115069 115230 1000 + . gene_id "MSTRG.3391"; transcript_id "MSTRG.3391.1"; exon_number "2"; scaffold_1050 StringTie exon 183311 183410 1000 + . gene_id "MSTRG.3400"; transcript_id "MSTRG.3400.1"; exon_number "1"; scaffold_1050 StringTie exon 183512 183846 1000 + . gene_id "MSTRG.3400"; transcript_id "MSTRG.3400.1"; exon_number "2"; scaffold_1050 StringTie exon 186927 187634 1000 . . gene_id "MSTRG.3403"; transcript_id "MSTRG.3403.1"; exon_number "1"; scaffold_1050 StringTie exon 246988 247071 1000 + . gene_id "MSTRG.3410"; transcript_id "MSTRG.3410.1"; exon_number "1"; scaffold_1050 StringTie exon 250111 250397 1000 + . gene_id "MSTRG.3410"; transcript_id "MSTRG.3410.1"; exon_number "2"; scaffold_1050 StringTie exon 320940 321273 1000 . . gene_id "MSTRG.3417"; transcript_id "MSTRG.3417.1"; exon_number "1"; scaffold_1051 StringTie exon 191519 191727 1000 . . gene_id "MSTRG.3435"; transcript_id "MSTRG.3435.1"; exon_number "1"; scaffold_10518 StringTie exon 14224 14467 1000 . . gene_id "MSTRG.3456"; transcript_id "MSTRG.3456.1"; exon_number "1"; scaffold_1052 StringTie exon 201938 202137 1000 . . gene_id "MSTRG.3477"; transcript_id "MSTRG.3477.1"; exon_number "1"; scaffold_10520 StringTie exon 3126 3387 1000 . . gene_id "MSTRG.3486"; transcript_id "MSTRG.3486.1"; exon_number "1"; scaffold_10521 StringTie exon 65 391 1000 . . gene_id "MSTRG.3489"; transcript_id "MSTRG.3489.1"; exon_number "1"; scaffold_10526 StringTie exon 2595 2960 1000 . . gene_id "MSTRG.3503"; transcript_id "MSTRG.3503.1"; exon_number "1"; scaffold_10527 StringTie exon 5424 5729 1000 . . gene_id "MSTRG.3507"; transcript_id "MSTRG.3507.1"; exon_number "1"; scaffold_1053 StringTie exon 224122 224412 1000 . . gene_id "MSTRG.3521"; transcript_id "MSTRG.3521.1"; exon_number "1"; scaffold_1053 StringTie exon 236693 236985 1000 + . gene_id "MSTRG.3524"; transcript_id "MSTRG.3524.1"; exon_number "1"; scaffold_1053 StringTie exon 240047 240101 1000 + . gene_id "MSTRG.3524"; transcript_id "MSTRG.3524.1"; exon_number "2"; scaffold_10534 StringTie exon 17821 18033 1000 . . gene_id "MSTRG.3539"; transcript_id "MSTRG.3539.1"; exon_number "1"; scaffold_1054 StringTie exon 166983 167275 1000 . . gene_id "MSTRG.3554"; transcript_id "MSTRG.3554.1"; exon_number "1"; scaffold_1054 StringTie exon 356621 356848 1000 . . gene_id "MSTRG.3563"; transcript_id "MSTRG.3563.1"; exon_number "1"; scaffold_10541 StringTie exon 6832 7163 1000 . . gene_id "MSTRG.3565"; transcript_id "MSTRG.3565.1"; exon_number "1"; scaffold_10546 StringTie exon 7693 8127 1000 . . gene_id "MSTRG.3575"; transcript_id "MSTRG.3575.1"; exon_number "1"; scaffold_1055 StringTie exon 199244 199436 1000 - . gene_id "MSTRG.3604"; transcript_id "MSTRG.3604.1"; exon_number "1"; scaffold_1055 StringTie exon 199679 199739 1000 - . gene_id "MSTRG.3604"; transcript_id "MSTRG.3604.1"; exon_number "2"; scaffold_1055 StringTie exon 199873 199965 1000 - . gene_id "MSTRG.3604"; transcript_id "MSTRG.3604.1"; exon_number "3"; scaffold_1055 StringTie exon 207474 207541 1000 - . gene_id "MSTRG.3604"; transcript_id "MSTRG.3604.1"; exon_number "4"; scaffold_1055 StringTie exon 207678 207790 1000 - . gene_id "MSTRG.3604"; transcript_id "MSTRG.3604.1"; exon_number "5"; scaffold_1055 StringTie exon 207883 207993 1000 - . gene_id "MSTRG.3604"; transcript_id "MSTRG.3604.1"; exon_number "6"; scaffold_1055 StringTie exon 208715 208969 1000 - . gene_id "MSTRG.3604"; transcript_id "MSTRG.3604.1"; exon_number "7"; scaffold_1055 StringTie exon 237711 238001 1000 - . gene_id "MSTRG.3609"; transcript_id "MSTRG.3609.1"; exon_number "1"; scaffold_1055 StringTie exon 238908 239006 1000 - . gene_id "MSTRG.3609"; transcript_id "MSTRG.3609.1"; exon_number "2"; scaffold_1055 StringTie exon 239608 239698 1000 - . gene_id "MSTRG.3609"; transcript_id "MSTRG.3609.1"; exon_number "3"; scaffold_1055 StringTie exon 240431 240548 1000 - . gene_id "MSTRG.3609"; transcript_id "MSTRG.3609.1"; exon_number "4"; scaffold_1055 StringTie exon 242397 242522 1000 - . gene_id "MSTRG.3609"; transcript_id "MSTRG.3609.1"; exon_number "5"; scaffold_1055 StringTie exon 242688 242783 1000 - . gene_id "MSTRG.3609"; transcript_id "MSTRG.3609.1"; exon_number "6"; scaffold_1055 StringTie exon 243165 243241 1000 - . gene_id "MSTRG.3609"; transcript_id "MSTRG.3609.1"; exon_number "7"; scaffold_10557 StringTie exon 4446 4526 1000 + . gene_id "MSTRG.3622"; transcript_id "MSTRG.3622.1"; exon_number "1"; scaffold_10557 StringTie exon 11031 11247 1000 + . gene_id "MSTRG.3622"; transcript_id "MSTRG.3622.1"; exon_number "2"; scaffold_10557 StringTie exon 17264 17858 1000 + . gene_id "MSTRG.3622"; transcript_id "MSTRG.3622.1"; exon_number "3"; scaffold_10557 StringTie exon 17901 18080 1000 + . gene_id "MSTRG.3622"; transcript_id "MSTRG.3622.1"; exon_number "4"; scaffold_1056 StringTie exon 36285 36524 1000 . . gene_id "MSTRG.3631"; transcript_id "MSTRG.3631.1"; exon_number "1"; scaffold_1056 StringTie exon 351623 352358 1000 . . gene_id "MSTRG.3663"; transcript_id "MSTRG.3663.1"; exon_number "1"; scaffold_10561 StringTie exon 1040 1375 1000 . . gene_id "MSTRG.3664"; transcript_id "MSTRG.3664.1"; exon_number "1"; scaffold_10569 StringTie exon 6705 6961 1000 . . gene_id "MSTRG.3676"; transcript_id "MSTRG.3676.1"; exon_number "1"; scaffold_1057 StringTie exon 202325 202625 1000 . . gene_id "MSTRG.3688"; transcript_id "MSTRG.3688.1"; exon_number "1"; scaffold_1058 StringTie exon 346578 347020 1000 . . gene_id "MSTRG.3723"; transcript_id "MSTRG.3723.1"; exon_number "1"; scaffold_10584 StringTie exon 2311 2578 1000 - . gene_id "MSTRG.3740"; transcript_id "MSTRG.3740.1"; exon_number "1"; scaffold_10584 StringTie exon 6127 6287 1000 - . gene_id "MSTRG.3740"; transcript_id "MSTRG.3740.1"; exon_number "2"; scaffold_10584 StringTie exon 11575 11868 1000 - . gene_id "MSTRG.3740"; transcript_id "MSTRG.3740.1"; exon_number "3"; scaffold_10599 StringTie exon 11463 11650 1000 + . gene_id "MSTRG.3811"; transcript_id "MSTRG.3811.1"; exon_number "1"; scaffold_10599 StringTie exon 12485 12565 1000 + . gene_id "MSTRG.3811"; transcript_id "MSTRG.3811.1"; exon_number "2"; scaffold_10599 StringTie exon 12694 13427 1000 + . gene_id "MSTRG.3811"; transcript_id "MSTRG.3811.1"; exon_number "3"; scaffold_106 StringTie exon 294517 294798 1000 . . gene_id "MSTRG.3826"; transcript_id "MSTRG.3826.1"; exon_number "1"; scaffold_106 StringTie exon 439786 440530 1000 . . gene_id "MSTRG.3832"; transcript_id "MSTRG.3832.1"; exon_number "1"; scaffold_106 StringTie exon 477903 478124 1000 . . gene_id "MSTRG.3834"; transcript_id "MSTRG.3834.1"; exon_number "1"; scaffold_106 StringTie exon 1137092 1137236 1000 - . gene_id "MSTRG.3873"; transcript_id "MSTRG.3873.1"; exon_number "1"; scaffold_106 StringTie exon 1138444 1138607 1000 - . gene_id "MSTRG.3873"; transcript_id "MSTRG.3873.1"; exon_number "2"; scaffold_106 StringTie exon 1156018 1156092 1000 - . gene_id "MSTRG.3874"; transcript_id "MSTRG.3874.1"; exon_number "1"; scaffold_106 StringTie exon 1157079 1157178 1000 - . gene_id "MSTRG.3874"; transcript_id "MSTRG.3874.1"; exon_number "2"; scaffold_106 StringTie exon 1184379 1184520 1000 - . gene_id "MSTRG.3874"; transcript_id "MSTRG.3874.1"; exon_number "3"; scaffold_106 StringTie exon 1202609 1202694 1000 - . gene_id "MSTRG.3874"; transcript_id "MSTRG.3874.1"; exon_number "4"; scaffold_106 StringTie exon 1619195 1619465 1000 . . gene_id "MSTRG.3898"; transcript_id "MSTRG.3898.1"; exon_number "1"; scaffold_106 StringTie exon 1634947 1635013 1000 - . gene_id "MSTRG.3900"; transcript_id "MSTRG.3900.1"; exon_number "1"; scaffold_106 StringTie exon 1637664 1637752 1000 - . gene_id "MSTRG.3900"; transcript_id "MSTRG.3900.1"; exon_number "2"; scaffold_106 StringTie exon 1638256 1638395 1000 - . gene_id "MSTRG.3900"; transcript_id "MSTRG.3900.1"; exon_number "3"; scaffold_106 StringTie exon 1638722 1638793 1000 - . gene_id "MSTRG.3900"; transcript_id "MSTRG.3900.1"; exon_number "4"; scaffold_106 StringTie exon 1652255 1652301 1000 - . gene_id "MSTRG.3904"; transcript_id "MSTRG.3904.1"; exon_number "1"; scaffold_106 StringTie exon 1653305 1653468 1000 - . gene_id "MSTRG.3904"; transcript_id "MSTRG.3904.1"; exon_number "2"; scaffold_106 StringTie exon 1653612 1653705 1000 - . gene_id "MSTRG.3904"; transcript_id "MSTRG.3904.1"; exon_number "3"; scaffold_1060 StringTie exon 266218 266735 1000 . . gene_id "MSTRG.3921"; transcript_id "MSTRG.3921.1"; exon_number "1"; scaffold_1060 StringTie exon 295698 296159 1000 . . gene_id "MSTRG.3924"; transcript_id "MSTRG.3924.1"; exon_number "1"; scaffold_10605 StringTie exon 3811 4280 1000 . . gene_id "MSTRG.3936"; transcript_id "MSTRG.3936.1"; exon_number "1"; scaffold_1061 StringTie exon 223138 223909 1000 . . gene_id "MSTRG.3960"; transcript_id "MSTRG.3960.1"; exon_number "1"; scaffold_1062 StringTie exon 232225 232697 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "1"; scaffold_1062 StringTie exon 233077 233124 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "2"; scaffold_1062 StringTie exon 233277 233329 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "3"; scaffold_1062 StringTie exon 233425 233530 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "4"; scaffold_1062 StringTie exon 235762 235834 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "5"; scaffold_1062 StringTie exon 235920 236011 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "6"; scaffold_1062 StringTie exon 236097 236179 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "7"; scaffold_1062 StringTie exon 237720 237858 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "8"; scaffold_1062 StringTie exon 237960 238096 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "9"; scaffold_1062 StringTie exon 241466 241573 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "10"; scaffold_1062 StringTie exon 241670 241739 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "11"; scaffold_1062 StringTie exon 241940 242104 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "12"; scaffold_1062 StringTie exon 242251 242361 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "13"; scaffold_1062 StringTie exon 242566 242656 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "14"; scaffold_1062 StringTie exon 243345 243724 1000 + . gene_id "MSTRG.3993"; transcript_id "MSTRG.3993.1"; exon_number "15"; scaffold_10620 StringTie exon 3828 4049 1000 . . gene_id "MSTRG.4006"; transcript_id "MSTRG.4006.1"; exon_number "1"; scaffold_10624 StringTie exon 8398 8632 1000 . . gene_id "MSTRG.4014"; transcript_id "MSTRG.4014.1"; exon_number "1"; scaffold_1063 StringTie exon 99122 99707 1000 . . gene_id "MSTRG.4032"; transcript_id "MSTRG.4032.1"; exon_number "1"; scaffold_1063 StringTie exon 148038 148254 1000 . . gene_id "MSTRG.4033"; transcript_id "MSTRG.4033.1"; exon_number "1"; scaffold_1063 StringTie exon 218444 218938 1000 . . gene_id "MSTRG.4046"; transcript_id "MSTRG.4046.1"; exon_number "1"; scaffold_10631 StringTie exon 17196 17808 1000 . . gene_id "MSTRG.4067"; transcript_id "MSTRG.4067.1"; exon_number "1"; scaffold_10635 StringTie exon 25 432 1000 . . gene_id "MSTRG.4069"; transcript_id "MSTRG.4069.1"; exon_number "1"; scaffold_1064 StringTie exon 62683 62828 1000 + . gene_id "MSTRG.4079"; transcript_id "MSTRG.4079.1"; exon_number "1"; scaffold_1064 StringTie exon 63129 63237 1000 + . gene_id "MSTRG.4079"; transcript_id "MSTRG.4079.1"; exon_number "2"; scaffold_1064 StringTie exon 66173 66224 1000 + . gene_id "MSTRG.4079"; transcript_id "MSTRG.4079.1"; exon_number "3"; scaffold_1064 StringTie exon 214135 214352 1000 . . gene_id "MSTRG.4088"; transcript_id "MSTRG.4088.1"; exon_number "1"; scaffold_1064 StringTie exon 305038 307209 1000 . . gene_id "MSTRG.4095"; transcript_id "MSTRG.4095.1"; exon_number "1"; scaffold_10648 StringTie exon 7672 7934 1000 - . gene_id "MSTRG.4117"; transcript_id "MSTRG.4117.2"; exon_number "1"; scaffold_1065 StringTie exon 148513 148625 1000 + . gene_id "MSTRG.4128"; transcript_id "MSTRG.4128.1"; exon_number "1"; scaffold_1065 StringTie exon 148755 148895 1000 + . gene_id "MSTRG.4128"; transcript_id "MSTRG.4128.1"; exon_number "2"; scaffold_1065 StringTie exon 149192 149254 1000 + . gene_id "MSTRG.4128"; transcript_id "MSTRG.4128.1"; exon_number "3"; scaffold_10653 StringTie exon 793 1106 1000 . . gene_id "MSTRG.4150"; transcript_id "MSTRG.4150.1"; exon_number "1"; scaffold_10657 StringTie exon 17566 17900 1000 . . gene_id "MSTRG.4156"; transcript_id "MSTRG.4156.1"; exon_number "1"; scaffold_1066 StringTie exon 126943 127437 1000 . . gene_id "MSTRG.4166"; transcript_id "MSTRG.4166.1"; exon_number "1"; scaffold_1066 StringTie exon 275284 275504 1000 . . gene_id "MSTRG.4178"; transcript_id "MSTRG.4178.1"; exon_number "1"; scaffold_1067 StringTie exon 39633 39879 1000 . . gene_id "MSTRG.4195"; transcript_id "MSTRG.4195.1"; exon_number "1"; scaffold_1067 StringTie exon 45593 46150 1000 . . gene_id "MSTRG.4198"; transcript_id "MSTRG.4198.1"; exon_number "1"; scaffold_1067 StringTie exon 68429 68666 1000 . . gene_id "MSTRG.4201"; transcript_id "MSTRG.4201.1"; exon_number "1"; scaffold_1067 StringTie exon 248408 248666 1000 . . gene_id "MSTRG.4221"; transcript_id "MSTRG.4221.1"; exon_number "1"; scaffold_1067 StringTie exon 287338 287562 1000 . . gene_id "MSTRG.4228"; transcript_id "MSTRG.4228.1"; exon_number "1"; scaffold_1067 StringTie exon 288081 288551 1000 . . gene_id "MSTRG.4229"; transcript_id "MSTRG.4229.1"; exon_number "1"; scaffold_10675 StringTie exon 7330 7630 1000 . . gene_id "MSTRG.4249"; transcript_id "MSTRG.4249.1"; exon_number "1"; scaffold_10679 StringTie exon 5900 6472 1000 . . gene_id "MSTRG.4255"; transcript_id "MSTRG.4255.1"; exon_number "1"; scaffold_1068 StringTie exon 41426 41443 1000 + . gene_id "MSTRG.4259"; transcript_id "MSTRG.4259.2"; exon_number "1"; scaffold_1068 StringTie exon 42090 42186 1000 + . gene_id "MSTRG.4259"; transcript_id "MSTRG.4259.2"; exon_number "2"; scaffold_1068 StringTie exon 43594 43700 1000 + . gene_id "MSTRG.4259"; transcript_id "MSTRG.4259.2"; exon_number "3"; scaffold_1068 StringTie exon 45552 45639 1000 + . gene_id "MSTRG.4259"; transcript_id "MSTRG.4259.2"; exon_number "4"; scaffold_1068 StringTie exon 46018 46101 1000 + . gene_id "MSTRG.4259"; transcript_id "MSTRG.4259.2"; exon_number "5"; scaffold_1068 StringTie exon 47240 47350 1000 + . gene_id "MSTRG.4259"; transcript_id "MSTRG.4259.2"; exon_number "6"; scaffold_1068 StringTie exon 47536 47554 1000 + . gene_id "MSTRG.4259"; transcript_id "MSTRG.4259.2"; exon_number "7"; scaffold_1068 StringTie exon 127664 128061 1000 . . gene_id "MSTRG.4266"; transcript_id "MSTRG.4266.1"; exon_number "1"; scaffold_1068 StringTie exon 339591 339831 1000 . . gene_id "MSTRG.4280"; transcript_id "MSTRG.4280.1"; exon_number "1"; scaffold_10685 StringTie exon 9860 10091 1000 + . gene_id "MSTRG.4292"; transcript_id "MSTRG.4292.1"; exon_number "1"; scaffold_10685 StringTie exon 14195 14375 1000 + . gene_id "MSTRG.4292"; transcript_id "MSTRG.4292.1"; exon_number "2"; scaffold_10685 StringTie exon 14713 14824 1000 + . gene_id "MSTRG.4292"; transcript_id "MSTRG.4292.1"; exon_number "3"; scaffold_10685 StringTie exon 17929 18365 1000 + . gene_id "MSTRG.4292"; transcript_id "MSTRG.4292.1"; exon_number "4"; scaffold_10686 StringTie exon 975 1338 1000 . . gene_id "MSTRG.4293"; transcript_id "MSTRG.4293.1"; exon_number "1"; scaffold_10687 StringTie exon 4968 5485 1000 . . gene_id "MSTRG.4296"; transcript_id "MSTRG.4296.1"; exon_number "1"; scaffold_10688 StringTie exon 1912 2294 1000 . . gene_id "MSTRG.4298"; transcript_id "MSTRG.4298.1"; exon_number "1"; scaffold_1069 StringTie exon 23186 23535 1000 + . gene_id "MSTRG.4305"; transcript_id "MSTRG.4305.1"; exon_number "1"; scaffold_1069 StringTie exon 317410 317549 1000 + . gene_id "MSTRG.4328"; transcript_id "MSTRG.4328.2"; exon_number "1"; scaffold_1069 StringTie exon 328347 329825 1000 + . gene_id "MSTRG.4328"; transcript_id "MSTRG.4328.2"; exon_number "2"; scaffold_107 StringTie exon 542299 542538 1000 - . gene_id "MSTRG.4386"; transcript_id "MSTRG.4386.1"; exon_number "1"; scaffold_107 StringTie exon 549455 549744 1000 - . gene_id "MSTRG.4386"; transcript_id "MSTRG.4386.1"; exon_number "2"; scaffold_107 StringTie exon 550022 550158 1000 - . gene_id "MSTRG.4386"; transcript_id "MSTRG.4386.1"; exon_number "3"; scaffold_107 StringTie exon 742763 743028 1000 . . gene_id "MSTRG.4395"; transcript_id "MSTRG.4395.1"; exon_number "1"; scaffold_107 StringTie exon 1006053 1006135 1000 + . gene_id "MSTRG.4427"; transcript_id "MSTRG.4427.1"; exon_number "1"; scaffold_107 StringTie exon 1006536 1006608 1000 + . gene_id "MSTRG.4427"; transcript_id "MSTRG.4427.1"; exon_number "2"; scaffold_107 StringTie exon 1006716 1006786 1000 + . gene_id "MSTRG.4427"; transcript_id "MSTRG.4427.1"; exon_number "3"; scaffold_107 StringTie exon 1319552 1319780 1000 . . gene_id "MSTRG.4439"; transcript_id "MSTRG.4439.1"; exon_number "1"; scaffold_1070 StringTie exon 227858 228443 1000 . . gene_id "MSTRG.4472"; transcript_id "MSTRG.4472.1"; exon_number "1"; scaffold_10707 StringTie exon 19969 20174 1000 . . gene_id "MSTRG.4504"; transcript_id "MSTRG.4504.1"; exon_number "1"; scaffold_10709 StringTie exon 18838 19395 1000 . . gene_id "MSTRG.4508"; transcript_id "MSTRG.4508.1"; exon_number "1"; scaffold_1071 StringTie exon 126374 126744 1000 . . gene_id "MSTRG.4529"; transcript_id "MSTRG.4529.1"; exon_number "1"; scaffold_1071 StringTie exon 212254 212734 1000 - . gene_id "MSTRG.4535"; transcript_id "MSTRG.4535.1"; exon_number "1"; scaffold_1071 StringTie exon 244529 245225 1000 . . gene_id "MSTRG.4540"; transcript_id "MSTRG.4540.1"; exon_number "1"; scaffold_1071 StringTie exon 333396 333950 1000 - . gene_id "MSTRG.4555"; transcript_id "MSTRG.4555.1"; exon_number "1"; scaffold_1071 StringTie exon 334102 334205 1000 - . gene_id "MSTRG.4555"; transcript_id "MSTRG.4555.1"; exon_number "2"; scaffold_1071 StringTie exon 335769 335866 1000 - . gene_id "MSTRG.4555"; transcript_id "MSTRG.4555.1"; exon_number "3"; scaffold_1071 StringTie exon 335956 336068 1000 - . gene_id "MSTRG.4555"; transcript_id "MSTRG.4555.1"; exon_number "4"; scaffold_10710 StringTie exon 15944 16322 1000 . . gene_id "MSTRG.4560"; transcript_id "MSTRG.4560.1"; exon_number "1"; scaffold_10713 StringTie exon 8341 9649 1000 . . gene_id "MSTRG.4568"; transcript_id "MSTRG.4568.1"; exon_number "1"; scaffold_10713 StringTie exon 18889 19282 1000 . . gene_id "MSTRG.4572"; transcript_id "MSTRG.4572.1"; exon_number "1"; scaffold_1072 StringTie exon 39462 39525 1000 + . gene_id "MSTRG.4582"; transcript_id "MSTRG.4582.1"; exon_number "1"; scaffold_1072 StringTie exon 39764 40338 1000 + . gene_id "MSTRG.4582"; transcript_id "MSTRG.4582.1"; exon_number "2"; scaffold_1073 StringTie exon 35086 35321 1000 . . gene_id "MSTRG.4625"; transcript_id "MSTRG.4625.1"; exon_number "1"; scaffold_1073 StringTie exon 133213 133518 1000 . . gene_id "MSTRG.4633"; transcript_id "MSTRG.4633.1"; exon_number "1"; scaffold_10736 StringTie exon 7122 9082 1000 . . gene_id "MSTRG.4648"; transcript_id "MSTRG.4648.1"; exon_number "1"; scaffold_1074 StringTie exon 52216 52264 1000 + . gene_id "MSTRG.4659"; transcript_id "MSTRG.4659.1"; exon_number "1"; scaffold_1074 StringTie exon 52361 52488 1000 + . gene_id "MSTRG.4659"; transcript_id "MSTRG.4659.1"; exon_number "2"; scaffold_1074 StringTie exon 52602 52774 1000 + . gene_id "MSTRG.4659"; transcript_id "MSTRG.4659.1"; exon_number "3"; scaffold_1074 StringTie exon 52890 53034 1000 + . gene_id "MSTRG.4659"; transcript_id "MSTRG.4659.1"; exon_number "4"; scaffold_1074 StringTie exon 53231 53313 1000 + . gene_id "MSTRG.4659"; transcript_id "MSTRG.4659.1"; exon_number "5"; scaffold_1074 StringTie exon 53467 53626 1000 + . gene_id "MSTRG.4659"; transcript_id "MSTRG.4659.1"; exon_number "6"; scaffold_1074 StringTie exon 53979 54101 1000 + . gene_id "MSTRG.4659"; transcript_id "MSTRG.4659.1"; exon_number "7"; scaffold_1074 StringTie exon 54376 55361 1000 + . gene_id "MSTRG.4659"; transcript_id "MSTRG.4659.1"; exon_number "8"; scaffold_1074 StringTie exon 91022 91088 1000 - . gene_id "MSTRG.4668"; transcript_id "MSTRG.4668.1"; exon_number "1"; scaffold_1074 StringTie exon 97658 97768 1000 - . gene_id "MSTRG.4668"; transcript_id "MSTRG.4668.1"; exon_number "2"; scaffold_1074 StringTie exon 98002 98023 1000 - . gene_id "MSTRG.4668"; transcript_id "MSTRG.4668.1"; exon_number "3"; scaffold_1075 StringTie exon 2109 2337 1000 . . gene_id "MSTRG.4691"; transcript_id "MSTRG.4691.1"; exon_number "1"; scaffold_1075 StringTie exon 43286 43512 1000 . . gene_id "MSTRG.4693"; transcript_id "MSTRG.4693.1"; exon_number "1"; scaffold_1075 StringTie exon 344042 344256 1000 . . gene_id "MSTRG.4702"; transcript_id "MSTRG.4702.1"; exon_number "1"; scaffold_10757 StringTie exon 13397 13650 1000 . . gene_id "MSTRG.4713"; transcript_id "MSTRG.4713.1"; exon_number "1"; scaffold_10761 StringTie exon 8392 8436 1000 - . gene_id "MSTRG.4760"; transcript_id "MSTRG.4760.1"; exon_number "1"; scaffold_10761 StringTie exon 8561 8653 1000 - . gene_id "MSTRG.4760"; transcript_id "MSTRG.4760.1"; exon_number "2"; scaffold_10761 StringTie exon 8803 8878 1000 - . gene_id "MSTRG.4760"; transcript_id "MSTRG.4760.1"; exon_number "3"; scaffold_1077 StringTie exon 15683 15892 1000 . . gene_id "MSTRG.4776"; transcript_id "MSTRG.4776.1"; exon_number "1"; scaffold_1077 StringTie exon 186756 186965 1000 . . gene_id "MSTRG.4788"; transcript_id "MSTRG.4788.1"; exon_number "1"; scaffold_1077 StringTie exon 309946 310182 1000 . . gene_id "MSTRG.4794"; transcript_id "MSTRG.4794.1"; exon_number "1"; scaffold_10774 StringTie exon 13819 14069 1000 . . gene_id "MSTRG.4801"; transcript_id "MSTRG.4801.1"; exon_number "1"; scaffold_1078 StringTie exon 138635 139057 1000 . . gene_id "MSTRG.4817"; transcript_id "MSTRG.4817.1"; exon_number "1"; scaffold_10783 StringTie exon 18118 18511 1000 . . gene_id "MSTRG.4832"; transcript_id "MSTRG.4832.1"; exon_number "1"; scaffold_10784 StringTie exon 19678 20400 1000 . . gene_id "MSTRG.4837"; transcript_id "MSTRG.4837.1"; exon_number "1"; scaffold_1079 StringTie exon 11181 11443 1000 . . gene_id "MSTRG.4844"; transcript_id "MSTRG.4844.1"; exon_number "1"; scaffold_1079 StringTie exon 92255 92309 1000 + . gene_id "MSTRG.4851"; transcript_id "MSTRG.4851.1"; exon_number "1"; scaffold_1079 StringTie exon 94312 94389 1000 + . gene_id "MSTRG.4851"; transcript_id "MSTRG.4851.1"; exon_number "2"; scaffold_1079 StringTie exon 94555 94665 1000 + . gene_id "MSTRG.4851"; transcript_id "MSTRG.4851.1"; exon_number "3"; scaffold_1079 StringTie exon 95196 95349 1000 + . gene_id "MSTRG.4851"; transcript_id "MSTRG.4851.1"; exon_number "4"; scaffold_1079 StringTie exon 95474 95486 1000 + . gene_id "MSTRG.4851"; transcript_id "MSTRG.4851.1"; exon_number "5"; scaffold_10797 StringTie exon 16124 16806 1000 . . gene_id "MSTRG.4878"; transcript_id "MSTRG.4878.1"; exon_number "1"; scaffold_10810 StringTie exon 3269 3547 1000 . . gene_id "MSTRG.4966"; transcript_id "MSTRG.4966.1"; exon_number "1"; scaffold_1082 StringTie exon 118942 119033 1000 + . gene_id "MSTRG.4991"; transcript_id "MSTRG.4991.1"; exon_number "1"; scaffold_1082 StringTie exon 119455 119671 1000 + . gene_id "MSTRG.4991"; transcript_id "MSTRG.4991.1"; exon_number "2"; scaffold_1082 StringTie exon 119975 120023 1000 + . gene_id "MSTRG.4991"; transcript_id "MSTRG.4991.1"; exon_number "3"; scaffold_1082 StringTie exon 136714 137010 1000 . . gene_id "MSTRG.4993"; transcript_id "MSTRG.4993.1"; exon_number "1"; scaffold_1082 StringTie exon 286276 286512 1000 . . gene_id "MSTRG.5016"; transcript_id "MSTRG.5016.1"; exon_number "1"; scaffold_10822 StringTie exon 5852 6063 1000 - . gene_id "MSTRG.5024"; transcript_id "MSTRG.5024.1"; exon_number "1"; scaffold_10822 StringTie exon 6375 6449 1000 - . gene_id "MSTRG.5024"; transcript_id "MSTRG.5024.1"; exon_number "2"; scaffold_10826 StringTie exon 145 288 1000 - . gene_id "MSTRG.5026"; transcript_id "MSTRG.5026.1"; exon_number "1"; scaffold_10826 StringTie exon 749 871 1000 - . gene_id "MSTRG.5026"; transcript_id "MSTRG.5026.1"; exon_number "2"; scaffold_10826 StringTie exon 1162 1757 1000 - . gene_id "MSTRG.5026"; transcript_id "MSTRG.5026.1"; exon_number "3"; scaffold_10829 StringTie exon 9269 9492 1000 . . gene_id "MSTRG.5032"; transcript_id "MSTRG.5032.1"; exon_number "1"; scaffold_1083 StringTie exon 229853 230086 1000 . . gene_id "MSTRG.5057"; transcript_id "MSTRG.5057.1"; exon_number "1"; scaffold_1083 StringTie exon 231565 231795 1000 . . gene_id "MSTRG.5058"; transcript_id "MSTRG.5058.1"; exon_number "1"; scaffold_10831 StringTie exon 16382 16608 1000 . . gene_id "MSTRG.5082"; transcript_id "MSTRG.5082.1"; exon_number "1"; scaffold_10837 StringTie exon 433 839 1000 + . gene_id "MSTRG.5092"; transcript_id "MSTRG.5092.1"; exon_number "1"; scaffold_10837 StringTie exon 3426 3578 1000 + . gene_id "MSTRG.5092"; transcript_id "MSTRG.5092.1"; exon_number "2"; scaffold_1084 StringTie exon 342610 342840 1000 . . gene_id "MSTRG.5118"; transcript_id "MSTRG.5118.1"; exon_number "1"; scaffold_10851 StringTie exon 14698 14942 1000 . . gene_id "MSTRG.5160"; transcript_id "MSTRG.5160.1"; exon_number "1"; scaffold_10853 StringTie exon 3259 3570 1000 . . gene_id "MSTRG.5164"; transcript_id "MSTRG.5164.1"; exon_number "1"; scaffold_1086 StringTie exon 16822 17007 1000 - . gene_id "MSTRG.5182"; transcript_id "MSTRG.5182.1"; exon_number "1"; scaffold_1086 StringTie exon 32339 32438 1000 - . gene_id "MSTRG.5182"; transcript_id "MSTRG.5182.1"; exon_number "2"; scaffold_1086 StringTie exon 134098 134326 1000 . . gene_id "MSTRG.5191"; transcript_id "MSTRG.5191.1"; exon_number "1"; scaffold_10866 StringTie exon 1252 1571 1000 . . gene_id "MSTRG.5213"; transcript_id "MSTRG.5213.1"; exon_number "1"; scaffold_1088 StringTie exon 29212 29619 1000 . . gene_id "MSTRG.5258"; transcript_id "MSTRG.5258.1"; exon_number "1"; scaffold_1088 StringTie exon 33112 33396 1000 . . gene_id "MSTRG.5260"; transcript_id "MSTRG.5260.1"; exon_number "1"; scaffold_1088 StringTie exon 156870 157070 1000 + . gene_id "MSTRG.5274"; transcript_id "MSTRG.5274.1"; exon_number "1"; scaffold_1089 StringTie exon 14901 15139 1000 . . gene_id "MSTRG.5302"; transcript_id "MSTRG.5302.1"; exon_number "1"; scaffold_1089 StringTie exon 207468 207903 1000 . . gene_id "MSTRG.5323"; transcript_id "MSTRG.5323.1"; exon_number "1"; scaffold_1089 StringTie exon 229945 230862 1000 . . gene_id "MSTRG.5326"; transcript_id "MSTRG.5326.1"; exon_number "1"; scaffold_1089 StringTie exon 303754 303822 1000 - . gene_id "MSTRG.5335"; transcript_id "MSTRG.5335.1"; exon_number "1"; scaffold_1089 StringTie exon 304711 304846 1000 - . gene_id "MSTRG.5335"; transcript_id "MSTRG.5335.1"; exon_number "2"; scaffold_10892 StringTie exon 15431 15668 1000 . . gene_id "MSTRG.5342"; transcript_id "MSTRG.5342.1"; exon_number "1"; scaffold_10896 StringTie exon 12819 13373 1000 . . gene_id "MSTRG.5346"; transcript_id "MSTRG.5346.1"; exon_number "1"; scaffold_10899 StringTie exon 4378 4684 1000 . . gene_id "MSTRG.5349"; transcript_id "MSTRG.5349.1"; exon_number "1"; scaffold_109 StringTie exon 33301 33636 1000 . . gene_id "MSTRG.5352"; transcript_id "MSTRG.5352.1"; exon_number "1"; scaffold_109 StringTie exon 146857 146955 1000 + . gene_id "MSTRG.5367"; transcript_id "MSTRG.5367.1"; exon_number "1"; scaffold_109 StringTie exon 147151 147353 1000 + . gene_id "MSTRG.5367"; transcript_id "MSTRG.5367.1"; exon_number "2"; scaffold_109 StringTie exon 779868 780196 1000 . . gene_id "MSTRG.5407"; transcript_id "MSTRG.5407.1"; exon_number "1"; scaffold_109 StringTie exon 781199 781459 1000 . . gene_id "MSTRG.5408"; transcript_id "MSTRG.5408.1"; exon_number "1"; scaffold_109 StringTie exon 930335 930894 1000 . . gene_id "MSTRG.5425"; transcript_id "MSTRG.5425.1"; exon_number "1"; scaffold_1090 StringTie exon 107494 107557 1000 + . gene_id "MSTRG.5473"; transcript_id "MSTRG.5473.1"; exon_number "1"; scaffold_1090 StringTie exon 108159 108285 1000 + . gene_id "MSTRG.5473"; transcript_id "MSTRG.5473.1"; exon_number "2"; scaffold_1090 StringTie exon 114736 114861 1000 + . gene_id "MSTRG.5473"; transcript_id "MSTRG.5473.1"; exon_number "3"; scaffold_1090 StringTie exon 114974 115129 1000 + . gene_id "MSTRG.5473"; transcript_id "MSTRG.5473.1"; exon_number "4"; scaffold_1090 StringTie exon 115877 115956 1000 + . gene_id "MSTRG.5473"; transcript_id "MSTRG.5473.1"; exon_number "5"; scaffold_1090 StringTie exon 194528 194696 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "1"; scaffold_1090 StringTie exon 194816 195046 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "2"; scaffold_1090 StringTie exon 196924 197203 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "3"; scaffold_1090 StringTie exon 198060 198141 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "4"; scaffold_1090 StringTie exon 198853 199025 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "5"; scaffold_1090 StringTie exon 200813 200924 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "6"; scaffold_1090 StringTie exon 201579 201694 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "7"; scaffold_1090 StringTie exon 202092 202253 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "8"; scaffold_1090 StringTie exon 202780 202941 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "9"; scaffold_1090 StringTie exon 203104 203268 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "10"; scaffold_1090 StringTie exon 203494 203631 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "11"; scaffold_1090 StringTie exon 203930 204542 1000 + . gene_id "MSTRG.5480"; transcript_id "MSTRG.5480.4"; exon_number "12"; scaffold_1090 StringTie exon 218092 218337 1000 . . gene_id "MSTRG.5481"; transcript_id "MSTRG.5481.1"; exon_number "1"; scaffold_1090 StringTie exon 281669 281893 1000 . . gene_id "MSTRG.5483"; transcript_id "MSTRG.5483.1"; exon_number "1"; scaffold_10904 StringTie exon 1933 2189 1000 . . gene_id "MSTRG.5495"; transcript_id "MSTRG.5495.1"; exon_number "1"; scaffold_1091 StringTie exon 9094 9329 1000 . . gene_id "MSTRG.5504"; transcript_id "MSTRG.5504.1"; exon_number "1"; scaffold_10912 StringTie exon 11830 12037 1000 . . gene_id "MSTRG.5524"; transcript_id "MSTRG.5524.1"; exon_number "1"; scaffold_10913 StringTie exon 8960 9334 1000 . . gene_id "MSTRG.5526"; transcript_id "MSTRG.5526.1"; exon_number "1"; scaffold_1092 StringTie exon 37280 37424 1000 - . gene_id "MSTRG.5544"; transcript_id "MSTRG.5544.1"; exon_number "1"; scaffold_1092 StringTie exon 37614 37761 1000 - . gene_id "MSTRG.5544"; transcript_id "MSTRG.5544.1"; exon_number "2"; scaffold_1092 StringTie exon 37953 38293 1000 - . gene_id "MSTRG.5544"; transcript_id "MSTRG.5544.1"; exon_number "3"; scaffold_1092 StringTie exon 86933 87490 1000 . . gene_id "MSTRG.5553"; transcript_id "MSTRG.5553.1"; exon_number "1"; scaffold_1092 StringTie exon 119886 120660 1000 + . gene_id "MSTRG.5557"; transcript_id "MSTRG.5557.1"; exon_number "1"; scaffold_1092 StringTie exon 211854 212494 1000 . . gene_id "MSTRG.5566"; transcript_id "MSTRG.5566.1"; exon_number "1"; scaffold_1092 StringTie exon 250629 251029 1000 . . gene_id "MSTRG.5570"; transcript_id "MSTRG.5570.1"; exon_number "1"; scaffold_1093 StringTie exon 231744 231883 1000 + . gene_id "MSTRG.5606"; transcript_id "MSTRG.5606.1"; exon_number "1"; scaffold_1093 StringTie exon 232606 232716 1000 + . gene_id "MSTRG.5606"; transcript_id "MSTRG.5606.1"; exon_number "2"; scaffold_1093 StringTie exon 232905 233021 1000 + . gene_id "MSTRG.5606"; transcript_id "MSTRG.5606.1"; exon_number "3"; scaffold_1093 StringTie exon 233953 234011 1000 + . gene_id "MSTRG.5606"; transcript_id "MSTRG.5606.1"; exon_number "4"; scaffold_1094 StringTie exon 28733 28957 1000 . . gene_id "MSTRG.5628"; transcript_id "MSTRG.5628.1"; exon_number "1"; scaffold_1094 StringTie exon 244511 244565 1000 - . gene_id "MSTRG.5646"; transcript_id "MSTRG.5646.1"; exon_number "1"; scaffold_1094 StringTie exon 244807 244888 1000 - . gene_id "MSTRG.5646"; transcript_id "MSTRG.5646.1"; exon_number "2"; scaffold_1094 StringTie exon 244991 245124 1000 - . gene_id "MSTRG.5646"; transcript_id "MSTRG.5646.1"; exon_number "3"; scaffold_1094 StringTie exon 258495 258809 1000 . . gene_id "MSTRG.5649"; transcript_id "MSTRG.5649.1"; exon_number "1"; scaffold_10940 StringTie exon 10779 11055 1000 . . gene_id "MSTRG.5657"; transcript_id "MSTRG.5657.1"; exon_number "1"; scaffold_10941 StringTie exon 14705 14844 1000 - . gene_id "MSTRG.5659"; transcript_id "MSTRG.5659.1"; exon_number "1"; scaffold_10941 StringTie exon 15469 15545 1000 - . gene_id "MSTRG.5659"; transcript_id "MSTRG.5659.1"; exon_number "2"; scaffold_1095 StringTie exon 87566 87800 1000 . . gene_id "MSTRG.5671"; transcript_id "MSTRG.5671.1"; exon_number "1"; scaffold_1095 StringTie exon 286389 286633 1000 . . gene_id "MSTRG.5683"; transcript_id "MSTRG.5683.1"; exon_number "1"; scaffold_10968 StringTie exon 11448 11569 1000 - . gene_id "MSTRG.5725"; transcript_id "MSTRG.5725.1"; exon_number "1"; scaffold_10968 StringTie exon 11968 12225 1000 - . gene_id "MSTRG.5725"; transcript_id "MSTRG.5725.1"; exon_number "2"; scaffold_1097 StringTie exon 48686 49773 1000 . . gene_id "MSTRG.5729"; transcript_id "MSTRG.5729.1"; exon_number "1"; scaffold_10975 StringTie exon 17704 17907 1000 . . gene_id "MSTRG.5758"; transcript_id "MSTRG.5758.1"; exon_number "1"; scaffold_1098 StringTie exon 16449 16765 1000 . . gene_id "MSTRG.5762"; transcript_id "MSTRG.5762.1"; exon_number "1"; scaffold_1098 StringTie exon 198462 198661 1000 . . gene_id "MSTRG.5770"; transcript_id "MSTRG.5770.1"; exon_number "1"; scaffold_10982 StringTie exon 6142 7161 1000 + . gene_id "MSTRG.5780"; transcript_id "MSTRG.5780.1"; exon_number "1"; scaffold_10982 StringTie exon 7889 7937 1000 + . gene_id "MSTRG.5781"; transcript_id "MSTRG.5781.1"; exon_number "1"; scaffold_10982 StringTie exon 19304 19974 1000 + . gene_id "MSTRG.5781"; transcript_id "MSTRG.5781.1"; exon_number "2"; scaffold_10983 StringTie exon 4485 4841 1000 . . gene_id "MSTRG.5782"; transcript_id "MSTRG.5782.1"; exon_number "1"; scaffold_10989 StringTie exon 406 709 1000 . . gene_id "MSTRG.5790"; transcript_id "MSTRG.5790.1"; exon_number "1"; scaffold_10989 StringTie exon 5152 5458 1000 . . gene_id "MSTRG.5791"; transcript_id "MSTRG.5791.1"; exon_number "1"; scaffold_1099 StringTie exon 219094 219305 1000 . . gene_id "MSTRG.5800"; transcript_id "MSTRG.5800.1"; exon_number "1"; scaffold_1099 StringTie exon 289147 289455 1000 . . gene_id "MSTRG.5805"; transcript_id "MSTRG.5805.1"; exon_number "1"; scaffold_11 StringTie exon 625285 625639 1000 . . gene_id "MSTRG.5872"; transcript_id "MSTRG.5872.1"; exon_number "1"; scaffold_11 StringTie exon 734036 734344 1000 . . gene_id "MSTRG.5884"; transcript_id "MSTRG.5884.1"; exon_number "1"; scaffold_11 StringTie exon 1269949 1270209 1000 . . gene_id "MSTRG.5906"; transcript_id "MSTRG.5906.1"; exon_number "1"; scaffold_11 StringTie exon 1354228 1354356 1000 - . gene_id "MSTRG.5917"; transcript_id "MSTRG.5917.1"; exon_number "1"; scaffold_11 StringTie exon 1354482 1354620 1000 - . gene_id "MSTRG.5917"; transcript_id "MSTRG.5917.1"; exon_number "2"; scaffold_11 StringTie exon 1354737 1354746 1000 - . gene_id "MSTRG.5917"; transcript_id "MSTRG.5917.1"; exon_number "3"; scaffold_11 StringTie exon 1357894 1358342 1000 . . gene_id "MSTRG.5919"; transcript_id "MSTRG.5919.1"; exon_number "1"; scaffold_11 StringTie exon 1769260 1769439 1000 - . gene_id "MSTRG.5945"; transcript_id "MSTRG.5945.1"; exon_number "1"; scaffold_11 StringTie exon 1769846 1770010 1000 - . gene_id "MSTRG.5945"; transcript_id "MSTRG.5945.1"; exon_number "2"; scaffold_11 StringTie exon 1770092 1770373 1000 - . gene_id "MSTRG.5945"; transcript_id "MSTRG.5945.1"; exon_number "3"; scaffold_11 StringTie exon 1920642 1921280 1000 - . gene_id "MSTRG.5964"; transcript_id "MSTRG.5964.1"; exon_number "1"; scaffold_11 StringTie exon 1959527 1959536 1000 - . gene_id "MSTRG.5964"; transcript_id "MSTRG.5964.1"; exon_number "2"; scaffold_11 StringTie exon 2024835 2025049 1000 . . gene_id "MSTRG.5969"; transcript_id "MSTRG.5969.1"; exon_number "1"; scaffold_11 StringTie exon 2075431 2075654 1000 . . gene_id "MSTRG.5973"; transcript_id "MSTRG.5973.1"; exon_number "1"; scaffold_11 StringTie exon 2097832 2098048 1000 . . gene_id "MSTRG.5975"; transcript_id "MSTRG.5975.1"; exon_number "1"; scaffold_11 StringTie exon 2125781 2125991 1000 . . gene_id "MSTRG.5977"; transcript_id "MSTRG.5977.1"; exon_number "1"; scaffold_11 StringTie exon 2474462 2474785 1000 + . gene_id "MSTRG.5992"; transcript_id "MSTRG.5992.1"; exon_number "1"; scaffold_11 StringTie exon 2484140 2484357 1000 + . gene_id "MSTRG.5992"; transcript_id "MSTRG.5992.1"; exon_number "2"; scaffold_11 StringTie exon 2490313 2490647 1000 . . gene_id "MSTRG.5997"; transcript_id "MSTRG.5997.1"; exon_number "1"; scaffold_11 StringTie exon 2691723 2691810 1000 - . gene_id "MSTRG.6010"; transcript_id "MSTRG.6010.1"; exon_number "1"; scaffold_11 StringTie exon 2692668 2693123 1000 - . gene_id "MSTRG.6010"; transcript_id "MSTRG.6010.1"; exon_number "2"; scaffold_11 StringTie exon 2693328 2693465 1000 - . gene_id "MSTRG.6010"; transcript_id "MSTRG.6010.1"; exon_number "3"; scaffold_11 StringTie exon 2693592 2693654 1000 - . gene_id "MSTRG.6010"; transcript_id "MSTRG.6010.1"; exon_number "4"; scaffold_11 StringTie exon 2693753 2693888 1000 - . gene_id "MSTRG.6010"; transcript_id "MSTRG.6010.1"; exon_number "5"; scaffold_11 StringTie exon 2694000 2694122 1000 - . gene_id "MSTRG.6010"; transcript_id "MSTRG.6010.1"; exon_number "6"; scaffold_11 StringTie exon 2694216 2694237 1000 - . gene_id "MSTRG.6010"; transcript_id "MSTRG.6010.1"; exon_number "7"; scaffold_11 StringTie exon 2923284 2923546 1000 . . gene_id "MSTRG.6023"; transcript_id "MSTRG.6023.1"; exon_number "1"; scaffold_11 StringTie exon 3069212 3069439 1000 . . gene_id "MSTRG.6034"; transcript_id "MSTRG.6034.1"; exon_number "1"; scaffold_11 StringTie exon 3141850 3141935 1000 - . gene_id "MSTRG.6040"; transcript_id "MSTRG.6040.1"; exon_number "1"; scaffold_11 StringTie exon 3142061 3142132 1000 - . gene_id "MSTRG.6040"; transcript_id "MSTRG.6040.1"; exon_number "2"; scaffold_11 StringTie exon 3142285 3142403 1000 - . gene_id "MSTRG.6040"; transcript_id "MSTRG.6040.1"; exon_number "3"; scaffold_11 StringTie exon 3142627 3142682 1000 - . gene_id "MSTRG.6040"; transcript_id "MSTRG.6040.1"; exon_number "4"; scaffold_110 StringTie exon 109632 109840 1000 . . gene_id "MSTRG.6046"; transcript_id "MSTRG.6046.1"; exon_number "1"; scaffold_110 StringTie exon 190873 191152 1000 . . gene_id "MSTRG.6048"; transcript_id "MSTRG.6048.1"; exon_number "1"; scaffold_110 StringTie exon 196956 197203 1000 . . gene_id "MSTRG.6049"; transcript_id "MSTRG.6049.1"; exon_number "1"; scaffold_110 StringTie exon 301389 301629 1000 . . gene_id "MSTRG.6056"; transcript_id "MSTRG.6056.1"; exon_number "1"; scaffold_110 StringTie exon 327648 327871 1000 . . gene_id "MSTRG.6058"; transcript_id "MSTRG.6058.1"; exon_number "1"; scaffold_110 StringTie exon 754406 754645 1000 . . gene_id "MSTRG.6095"; transcript_id "MSTRG.6095.1"; exon_number "1"; scaffold_110 StringTie exon 1267995 1268168 1000 - . gene_id "MSTRG.6150"; transcript_id "MSTRG.6150.2"; exon_number "1"; scaffold_110 StringTie exon 1269850 1270525 1000 - . gene_id "MSTRG.6150"; transcript_id "MSTRG.6150.2"; exon_number "2"; scaffold_110 StringTie exon 1370731 1371093 1000 . . gene_id "MSTRG.6154"; transcript_id "MSTRG.6154.1"; exon_number "1"; scaffold_1100 StringTie exon 119400 119615 1000 . . gene_id "MSTRG.6187"; transcript_id "MSTRG.6187.1"; exon_number "1"; scaffold_1101 StringTie exon 141185 141334 1000 - . gene_id "MSTRG.6218"; transcript_id "MSTRG.6218.1"; exon_number "1"; scaffold_1101 StringTie exon 141669 141768 1000 - . gene_id "MSTRG.6218"; transcript_id "MSTRG.6218.1"; exon_number "2"; scaffold_1101 StringTie exon 143752 143891 1000 - . gene_id "MSTRG.6218"; transcript_id "MSTRG.6218.1"; exon_number "3"; scaffold_1101 StringTie exon 144146 144364 1000 - . gene_id "MSTRG.6218"; transcript_id "MSTRG.6218.1"; exon_number "4"; scaffold_11018 StringTie exon 12788 13134 1000 . . gene_id "MSTRG.6245"; transcript_id "MSTRG.6245.1"; exon_number "1"; scaffold_1102 StringTie exon 311905 312319 1000 . . gene_id "MSTRG.6264"; transcript_id "MSTRG.6264.1"; exon_number "1"; scaffold_1103 StringTie exon 322477 322719 1000 . . gene_id "MSTRG.6306"; transcript_id "MSTRG.6306.1"; exon_number "1"; scaffold_11031 StringTie exon 2796 3126 1000 . . gene_id "MSTRG.6312"; transcript_id "MSTRG.6312.1"; exon_number "1"; scaffold_11039 StringTie exon 17485 17545 1000 + . gene_id "MSTRG.6328"; transcript_id "MSTRG.6328.1"; exon_number "1"; scaffold_11039 StringTie exon 17639 17908 1000 + . gene_id "MSTRG.6328"; transcript_id "MSTRG.6328.1"; exon_number "2"; scaffold_11044 StringTie exon 1473 1764 1000 . . gene_id "MSTRG.6350"; transcript_id "MSTRG.6350.1"; exon_number "1"; scaffold_11048 StringTie exon 2465 2680 1000 . . gene_id "MSTRG.6359"; transcript_id "MSTRG.6359.1"; exon_number "1"; scaffold_1105 StringTie exon 219980 220032 1000 - . gene_id "MSTRG.6386"; transcript_id "MSTRG.6386.1"; exon_number "1"; scaffold_1105 StringTie exon 225434 225799 1000 - . gene_id "MSTRG.6386"; transcript_id "MSTRG.6386.1"; exon_number "2"; scaffold_1105 StringTie exon 226012 226502 1000 - . gene_id "MSTRG.6386"; transcript_id "MSTRG.6386.1"; exon_number "3"; scaffold_11056 StringTie exon 3025 3754 1000 . . gene_id "MSTRG.6406"; transcript_id "MSTRG.6406.1"; exon_number "1"; scaffold_11067 StringTie exon 681 925 1000 . . gene_id "MSTRG.6431"; transcript_id "MSTRG.6431.1"; exon_number "1"; scaffold_11075 StringTie exon 13831 14057 1000 . . gene_id "MSTRG.6469"; transcript_id "MSTRG.6469.1"; exon_number "1"; scaffold_1108 StringTie exon 3624 3904 1000 . . gene_id "MSTRG.6474"; transcript_id "MSTRG.6474.1"; exon_number "1"; scaffold_1108 StringTie exon 4331 4837 1000 . . gene_id "MSTRG.6475"; transcript_id "MSTRG.6475.1"; exon_number "1"; scaffold_1108 StringTie exon 5139 5202 1000 - . gene_id "MSTRG.6476"; transcript_id "MSTRG.6476.1"; exon_number "1"; scaffold_1108 StringTie exon 5330 6249 1000 - . gene_id "MSTRG.6476"; transcript_id "MSTRG.6476.1"; exon_number "2"; scaffold_1108 StringTie exon 6502 6547 1000 - . gene_id "MSTRG.6476"; transcript_id "MSTRG.6476.1"; exon_number "3"; scaffold_1108 StringTie exon 293119 293328 1000 . . gene_id "MSTRG.6515"; transcript_id "MSTRG.6515.1"; exon_number "1"; scaffold_1109 StringTie exon 43879 43912 1000 + . gene_id "MSTRG.6536"; transcript_id "MSTRG.6536.1"; exon_number "1"; scaffold_1109 StringTie exon 58429 58728 1000 + . gene_id "MSTRG.6536"; transcript_id "MSTRG.6536.1"; exon_number "2"; scaffold_1109 StringTie exon 60459 61014 1000 . . gene_id "MSTRG.6538"; transcript_id "MSTRG.6538.1"; exon_number "1"; scaffold_1109 StringTie exon 230245 230555 1000 . . gene_id "MSTRG.6548"; transcript_id "MSTRG.6548.1"; exon_number "1"; scaffold_11094 StringTie exon 320 590 1000 . . gene_id "MSTRG.6565"; transcript_id "MSTRG.6565.1"; exon_number "1"; scaffold_111 StringTie exon 607397 607652 1000 . . gene_id "MSTRG.6604"; transcript_id "MSTRG.6604.1"; exon_number "1"; scaffold_111 StringTie exon 1339516 1339642 1000 + . gene_id "MSTRG.6657"; transcript_id "MSTRG.6657.1"; exon_number "1"; scaffold_111 StringTie exon 1340544 1340678 1000 + . gene_id "MSTRG.6657"; transcript_id "MSTRG.6657.1"; exon_number "2"; scaffold_111 StringTie exon 1450827 1451094 1000 . . gene_id "MSTRG.6667"; transcript_id "MSTRG.6667.1"; exon_number "1"; scaffold_111 StringTie exon 1621521 1621817 1000 . . gene_id "MSTRG.6677"; transcript_id "MSTRG.6677.1"; exon_number "1"; scaffold_1110 StringTie exon 181535 181748 1000 . . gene_id "MSTRG.6693"; transcript_id "MSTRG.6693.1"; exon_number "1"; scaffold_1110 StringTie exon 331956 332171 1000 . . gene_id "MSTRG.6708"; transcript_id "MSTRG.6708.1"; exon_number "1"; scaffold_11101 StringTie exon 6656 6950 1000 . . gene_id "MSTRG.6709"; transcript_id "MSTRG.6709.1"; exon_number "1"; scaffold_1111 StringTie exon 324446 324673 1000 . . gene_id "MSTRG.6740"; transcript_id "MSTRG.6740.1"; exon_number "1"; scaffold_11112 StringTie exon 4040 4270 1000 . . gene_id "MSTRG.6750"; transcript_id "MSTRG.6750.1"; exon_number "1"; scaffold_1112 StringTie exon 207738 208231 1000 . . gene_id "MSTRG.6761"; transcript_id "MSTRG.6761.1"; exon_number "1"; scaffold_1112 StringTie exon 251766 252024 1000 . . gene_id "MSTRG.6763"; transcript_id "MSTRG.6763.1"; exon_number "1"; scaffold_11124 StringTie exon 19336 19542 1000 . . gene_id "MSTRG.6775"; transcript_id "MSTRG.6775.1"; exon_number "1"; scaffold_1113 StringTie exon 281273 281452 1000 + . gene_id "MSTRG.6793"; transcript_id "MSTRG.6793.1"; exon_number "1"; scaffold_1113 StringTie exon 281578 281714 1000 + . gene_id "MSTRG.6793"; transcript_id "MSTRG.6793.1"; exon_number "2"; scaffold_1113 StringTie exon 282274 282389 1000 + . gene_id "MSTRG.6793"; transcript_id "MSTRG.6793.1"; exon_number "3"; scaffold_1113 StringTie exon 282573 282743 1000 + . gene_id "MSTRG.6793"; transcript_id "MSTRG.6793.1"; exon_number "4"; scaffold_1113 StringTie exon 283395 283639 1000 + . gene_id "MSTRG.6793"; transcript_id "MSTRG.6793.1"; exon_number "5"; scaffold_1113 StringTie exon 283064 283125 1000 + . gene_id "MSTRG.6793"; transcript_id "MSTRG.6793.2"; exon_number "1"; scaffold_1113 StringTie exon 283263 283508 1000 + . gene_id "MSTRG.6793"; transcript_id "MSTRG.6793.2"; exon_number "2"; scaffold_1113 StringTie exon 324306 324534 1000 . . gene_id "MSTRG.6795"; transcript_id "MSTRG.6795.1"; exon_number "1"; scaffold_11130 StringTie exon 13164 13470 1000 . . gene_id "MSTRG.6801"; transcript_id "MSTRG.6801.1"; exon_number "1"; scaffold_11133 StringTie exon 14639 14890 1000 . . gene_id "MSTRG.6808"; transcript_id "MSTRG.6808.1"; exon_number "1"; scaffold_1114 StringTie exon 62846 63067 1000 . . gene_id "MSTRG.6825"; transcript_id "MSTRG.6825.1"; exon_number "1"; scaffold_1114 StringTie exon 163284 164185 1000 . . gene_id "MSTRG.6829"; transcript_id "MSTRG.6829.1"; exon_number "1"; scaffold_1115 StringTie exon 209432 209545 1000 + . gene_id "MSTRG.6872"; transcript_id "MSTRG.6872.1"; exon_number "1"; scaffold_1115 StringTie exon 209962 210048 1000 + . gene_id "MSTRG.6872"; transcript_id "MSTRG.6872.1"; exon_number "2"; scaffold_1115 StringTie exon 210118 210257 1000 + . gene_id "MSTRG.6872"; transcript_id "MSTRG.6872.1"; exon_number "3"; scaffold_1115 StringTie exon 271591 271846 1000 . . gene_id "MSTRG.6876"; transcript_id "MSTRG.6876.1"; exon_number "1"; scaffold_1115 StringTie exon 308505 308751 1000 . . gene_id "MSTRG.6882"; transcript_id "MSTRG.6882.1"; exon_number "1"; scaffold_11165 StringTie exon 8973 9176 1000 - . gene_id "MSTRG.6926"; transcript_id "MSTRG.6926.1"; exon_number "1"; scaffold_11165 StringTie exon 10641 10819 1000 - . gene_id "MSTRG.6926"; transcript_id "MSTRG.6926.1"; exon_number "2"; scaffold_11167 StringTie exon 13885 14092 1000 . . gene_id "MSTRG.6929"; transcript_id "MSTRG.6929.1"; exon_number "1"; scaffold_1117 StringTie exon 59326 59713 1000 . . gene_id "MSTRG.6938"; transcript_id "MSTRG.6938.1"; exon_number "1"; scaffold_1117 StringTie exon 65933 66177 1000 . . gene_id "MSTRG.6941"; transcript_id "MSTRG.6941.1"; exon_number "1"; scaffold_11170 StringTie exon 1510 1920 1000 . . gene_id "MSTRG.6965"; transcript_id "MSTRG.6965.1"; exon_number "1"; scaffold_11170 StringTie exon 17346 17647 1000 . . gene_id "MSTRG.6968"; transcript_id "MSTRG.6968.1"; exon_number "1"; scaffold_11172 StringTie exon 1946 3763 1000 + . gene_id "MSTRG.6971"; transcript_id "MSTRG.6971.1"; exon_number "1"; scaffold_1118 StringTie exon 67331 67551 1000 . . gene_id "MSTRG.6992"; transcript_id "MSTRG.6992.1"; exon_number "1"; scaffold_1118 StringTie exon 302462 302746 1000 . . gene_id "MSTRG.7011"; transcript_id "MSTRG.7011.1"; exon_number "1"; scaffold_11181 StringTie exon 10581 10920 1000 . . gene_id "MSTRG.7016"; transcript_id "MSTRG.7016.1"; exon_number "1"; scaffold_11183 StringTie exon 19045 19363 1000 . . gene_id "MSTRG.7019"; transcript_id "MSTRG.7019.1"; exon_number "1"; scaffold_11184 StringTie exon 15923 18937 1000 . . gene_id "MSTRG.7020"; transcript_id "MSTRG.7020.1"; exon_number "1"; scaffold_1119 StringTie exon 131209 131284 1000 + . gene_id "MSTRG.7033"; transcript_id "MSTRG.7033.1"; exon_number "1"; scaffold_1119 StringTie exon 132273 132475 1000 + . gene_id "MSTRG.7033"; transcript_id "MSTRG.7033.1"; exon_number "2"; scaffold_1119 StringTie exon 132815 132851 1000 + . gene_id "MSTRG.7033"; transcript_id "MSTRG.7033.1"; exon_number "3"; scaffold_11192 StringTie exon 19162 19454 1000 . . gene_id "MSTRG.7057"; transcript_id "MSTRG.7057.1"; exon_number "1"; scaffold_112 StringTie exon 165880 166178 1000 . . gene_id "MSTRG.7073"; transcript_id "MSTRG.7073.1"; exon_number "1"; scaffold_112 StringTie exon 795278 795608 1000 . . gene_id "MSTRG.7113"; transcript_id "MSTRG.7113.1"; exon_number "1"; scaffold_112 StringTie exon 865777 866115 1000 . . gene_id "MSTRG.7119"; transcript_id "MSTRG.7119.1"; exon_number "1"; scaffold_112 StringTie exon 869781 869922 1000 + . gene_id "MSTRG.7120"; transcript_id "MSTRG.7120.1"; exon_number "1"; scaffold_112 StringTie exon 870319 870491 1000 + . gene_id "MSTRG.7120"; transcript_id "MSTRG.7120.1"; exon_number "2"; scaffold_112 StringTie exon 1120580 1120779 1000 . . gene_id "MSTRG.7133"; transcript_id "MSTRG.7133.1"; exon_number "1"; scaffold_112 StringTie exon 1517858 1518094 1000 . . gene_id "MSTRG.7151"; transcript_id "MSTRG.7151.1"; exon_number "1"; scaffold_11200 StringTie exon 11504 11748 1000 . . gene_id "MSTRG.7204"; transcript_id "MSTRG.7204.1"; exon_number "1"; scaffold_1121 StringTie exon 132413 132869 1000 . . gene_id "MSTRG.7232"; transcript_id "MSTRG.7232.1"; exon_number "1"; scaffold_1121 StringTie exon 323989 324209 1000 . . gene_id "MSTRG.7240"; transcript_id "MSTRG.7240.1"; exon_number "1"; scaffold_11212 StringTie exon 229 3633 1000 . . gene_id "MSTRG.7243"; transcript_id "MSTRG.7243.1"; exon_number "1"; scaffold_1122 StringTie exon 132654 132882 1000 + . gene_id "MSTRG.7272"; transcript_id "MSTRG.7272.2"; exon_number "1"; scaffold_1122 StringTie exon 133200 133528 1000 + . gene_id "MSTRG.7272"; transcript_id "MSTRG.7272.2"; exon_number "2"; scaffold_1122 StringTie exon 135145 135698 1000 + . gene_id "MSTRG.7272"; transcript_id "MSTRG.7272.2"; exon_number "3"; scaffold_1122 StringTie exon 138335 138624 1000 + . gene_id "MSTRG.7273"; transcript_id "MSTRG.7273.2"; exon_number "1"; scaffold_1122 StringTie exon 180702 180713 1000 + . gene_id "MSTRG.7273"; transcript_id "MSTRG.7273.2"; exon_number "2"; scaffold_1123 StringTie exon 256162 256511 1000 . . gene_id "MSTRG.7331"; transcript_id "MSTRG.7331.1"; exon_number "1"; scaffold_1123 StringTie exon 319242 319447 1000 . . gene_id "MSTRG.7335"; transcript_id "MSTRG.7335.1"; exon_number "1"; scaffold_11231 StringTie exon 6 1002 1000 . . gene_id "MSTRG.7336"; transcript_id "MSTRG.7336.1"; exon_number "1"; scaffold_11232 StringTie exon 8590 8897 1000 . . gene_id "MSTRG.7341"; transcript_id "MSTRG.7341.1"; exon_number "1"; scaffold_11235 StringTie exon 17003 17155 1000 + . gene_id "MSTRG.7347"; transcript_id "MSTRG.7347.1"; exon_number "1"; scaffold_11235 StringTie exon 18663 18752 1000 + . gene_id "MSTRG.7347"; transcript_id "MSTRG.7347.1"; exon_number "2"; scaffold_11235 StringTie exon 19170 19355 1000 + . gene_id "MSTRG.7347"; transcript_id "MSTRG.7347.1"; exon_number "3"; scaffold_1124 StringTie exon 148284 148561 1000 . . gene_id "MSTRG.7363"; transcript_id "MSTRG.7363.1"; exon_number "1"; scaffold_11243 StringTie exon 4954 5338 1000 . . gene_id "MSTRG.7384"; transcript_id "MSTRG.7384.1"; exon_number "1"; scaffold_11243 StringTie exon 6757 7460 1000 . . gene_id "MSTRG.7385"; transcript_id "MSTRG.7385.1"; exon_number "1"; scaffold_1125 StringTie exon 27277 27317 1000 - . gene_id "MSTRG.7401"; transcript_id "MSTRG.7401.1"; exon_number "1"; scaffold_1125 StringTie exon 31182 31343 1000 - . gene_id "MSTRG.7401"; transcript_id "MSTRG.7401.1"; exon_number "2"; scaffold_1125 StringTie exon 99599 99736 1000 - . gene_id "MSTRG.7410"; transcript_id "MSTRG.7410.1"; exon_number "1"; scaffold_1125 StringTie exon 99855 99996 1000 - . gene_id "MSTRG.7410"; transcript_id "MSTRG.7410.1"; exon_number "2"; scaffold_1125 StringTie exon 101974 102150 1000 - . gene_id "MSTRG.7410"; transcript_id "MSTRG.7410.1"; exon_number "3"; scaffold_1125 StringTie exon 102367 102416 1000 - . gene_id "MSTRG.7410"; transcript_id "MSTRG.7410.1"; exon_number "4"; scaffold_1125 StringTie exon 241560 241836 1000 . . gene_id "MSTRG.7424"; transcript_id "MSTRG.7424.1"; exon_number "1"; scaffold_11255 StringTie exon 13627 14093 1000 . . gene_id "MSTRG.7438"; transcript_id "MSTRG.7438.1"; exon_number "1"; scaffold_11267 StringTie exon 8906 9118 1000 . . gene_id "MSTRG.7479"; transcript_id "MSTRG.7479.1"; exon_number "1"; scaffold_1127 StringTie exon 323735 324014 1000 . . gene_id "MSTRG.7501"; transcript_id "MSTRG.7501.1"; exon_number "1"; scaffold_11276 StringTie exon 2434 2482 1000 + . gene_id "MSTRG.7519"; transcript_id "MSTRG.7519.1"; exon_number "1"; scaffold_11276 StringTie exon 2731 2829 1000 + . gene_id "MSTRG.7519"; transcript_id "MSTRG.7519.1"; exon_number "2"; scaffold_11276 StringTie exon 3072 3139 1000 + . gene_id "MSTRG.7519"; transcript_id "MSTRG.7519.1"; exon_number "3"; scaffold_11279 StringTie exon 525 858 1000 . . gene_id "MSTRG.7523"; transcript_id "MSTRG.7523.1"; exon_number "1"; scaffold_1128 StringTie exon 31877 32220 1000 . . gene_id "MSTRG.7527"; transcript_id "MSTRG.7527.1"; exon_number "1"; scaffold_1128 StringTie exon 270908 271225 1000 . . gene_id "MSTRG.7552"; transcript_id "MSTRG.7552.1"; exon_number "1"; scaffold_1128 StringTie exon 316325 316582 1000 . . gene_id "MSTRG.7555"; transcript_id "MSTRG.7555.1"; exon_number "1"; scaffold_11289 StringTie exon 10162 10681 1000 - . gene_id "MSTRG.7568"; transcript_id "MSTRG.7568.1"; exon_number "1"; scaffold_11289 StringTie exon 11934 12033 1000 - . gene_id "MSTRG.7568"; transcript_id "MSTRG.7568.1"; exon_number "2"; scaffold_11289 StringTie exon 13727 13804 1000 - . gene_id "MSTRG.7568"; transcript_id "MSTRG.7568.1"; exon_number "3"; scaffold_11289 StringTie exon 14739 14831 1000 - . gene_id "MSTRG.7568"; transcript_id "MSTRG.7568.1"; exon_number "4"; scaffold_11289 StringTie exon 15848 16089 1000 - . gene_id "MSTRG.7568"; transcript_id "MSTRG.7568.1"; exon_number "5"; scaffold_1129 StringTie exon 27910 28141 1000 . . gene_id "MSTRG.7571"; transcript_id "MSTRG.7571.1"; exon_number "1"; scaffold_1129 StringTie exon 55277 55564 1000 . . gene_id "MSTRG.7573"; transcript_id "MSTRG.7573.1"; exon_number "1"; scaffold_11290 StringTie exon 16027 16318 1000 . . gene_id "MSTRG.7595"; transcript_id "MSTRG.7595.1"; exon_number "1"; scaffold_11299 StringTie exon 15030 15465 1000 . . gene_id "MSTRG.7607"; transcript_id "MSTRG.7607.1"; exon_number "1"; scaffold_113 StringTie exon 494771 494894 1000 + . gene_id "MSTRG.7637"; transcript_id "MSTRG.7637.1"; exon_number "1"; scaffold_113 StringTie exon 495020 495119 1000 + . gene_id "MSTRG.7637"; transcript_id "MSTRG.7637.1"; exon_number "2"; scaffold_113 StringTie exon 509729 509935 1000 - . gene_id "MSTRG.7643"; transcript_id "MSTRG.7643.2"; exon_number "1"; scaffold_113 StringTie exon 510142 510278 1000 - . gene_id "MSTRG.7643"; transcript_id "MSTRG.7643.2"; exon_number "2"; scaffold_113 StringTie exon 510358 510408 1000 - . gene_id "MSTRG.7643"; transcript_id "MSTRG.7643.2"; exon_number "3"; scaffold_113 StringTie exon 514354 514443 1000 - . gene_id "MSTRG.7643"; transcript_id "MSTRG.7643.2"; exon_number "4"; scaffold_113 StringTie exon 514677 514747 1000 - . gene_id "MSTRG.7643"; transcript_id "MSTRG.7643.2"; exon_number "5"; scaffold_113 StringTie exon 663519 664180 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "1"; scaffold_113 StringTie exon 664701 664882 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "2"; scaffold_113 StringTie exon 665013 665204 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "3"; scaffold_113 StringTie exon 665365 665526 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "4"; scaffold_113 StringTie exon 665696 665780 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "5"; scaffold_113 StringTie exon 667596 667706 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "6"; scaffold_113 StringTie exon 668294 668422 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "7"; scaffold_113 StringTie exon 668683 668857 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "8"; scaffold_113 StringTie exon 671401 671444 1000 - . gene_id "MSTRG.7671"; transcript_id "MSTRG.7671.1"; exon_number "9"; scaffold_113 StringTie exon 843440 843824 1000 - . gene_id "MSTRG.7691"; transcript_id "MSTRG.7691.1"; exon_number "1"; scaffold_113 StringTie exon 843954 844020 1000 - . gene_id "MSTRG.7691"; transcript_id "MSTRG.7691.1"; exon_number "2"; scaffold_113 StringTie exon 1605512 1605775 1000 . . gene_id "MSTRG.7761"; transcript_id "MSTRG.7761.1"; exon_number "1"; scaffold_1130 StringTie exon 116854 117191 1000 . . gene_id "MSTRG.7771"; transcript_id "MSTRG.7771.1"; exon_number "1"; scaffold_1130 StringTie exon 263041 263339 1000 . . gene_id "MSTRG.7779"; transcript_id "MSTRG.7779.1"; exon_number "1"; scaffold_11309 StringTie exon 7210 7446 1000 . . gene_id "MSTRG.7788"; transcript_id "MSTRG.7788.1"; exon_number "1"; scaffold_1131 StringTie exon 49771 49782 1000 + . gene_id "MSTRG.7795"; transcript_id "MSTRG.7795.1"; exon_number "1"; scaffold_1131 StringTie exon 49890 50005 1000 + . gene_id "MSTRG.7795"; transcript_id "MSTRG.7795.1"; exon_number "2"; scaffold_1131 StringTie exon 50169 50466 1000 + . gene_id "MSTRG.7795"; transcript_id "MSTRG.7795.1"; exon_number "3"; scaffold_1131 StringTie exon 231593 231671 1000 - . gene_id "MSTRG.7811"; transcript_id "MSTRG.7811.1"; exon_number "1"; scaffold_1131 StringTie exon 233192 233322 1000 - . gene_id "MSTRG.7811"; transcript_id "MSTRG.7811.1"; exon_number "2"; scaffold_1131 StringTie exon 295622 295942 1000 . . gene_id "MSTRG.7816"; transcript_id "MSTRG.7816.1"; exon_number "1"; scaffold_1134 StringTie exon 21402 21724 1000 - . gene_id "MSTRG.7904"; transcript_id "MSTRG.7904.2"; exon_number "1"; scaffold_1134 StringTie exon 21983 22049 1000 - . gene_id "MSTRG.7904"; transcript_id "MSTRG.7904.2"; exon_number "2"; scaffold_1134 StringTie exon 22204 22323 1000 - . gene_id "MSTRG.7904"; transcript_id "MSTRG.7904.2"; exon_number "3"; scaffold_1134 StringTie exon 22473 22606 1000 - . gene_id "MSTRG.7904"; transcript_id "MSTRG.7904.2"; exon_number "4"; scaffold_1134 StringTie exon 24490 24602 1000 - . gene_id "MSTRG.7904"; transcript_id "MSTRG.7904.2"; exon_number "5"; scaffold_1134 StringTie exon 40402 40807 1000 . . gene_id "MSTRG.7905"; transcript_id "MSTRG.7905.1"; exon_number "1"; scaffold_1134 StringTie exon 226488 226783 1000 . . gene_id "MSTRG.7920"; transcript_id "MSTRG.7920.1"; exon_number "1"; scaffold_11343 StringTie exon 9171 9410 1000 . . gene_id "MSTRG.7927"; transcript_id "MSTRG.7927.1"; exon_number "1"; scaffold_11349 StringTie exon 4580 5238 1000 . . gene_id "MSTRG.7932"; transcript_id "MSTRG.7932.1"; exon_number "1"; scaffold_1135 StringTie exon 75837 76288 1000 . . gene_id "MSTRG.7940"; transcript_id "MSTRG.7940.1"; exon_number "1"; scaffold_11351 StringTie exon 784 1510 1000 . . gene_id "MSTRG.7964"; transcript_id "MSTRG.7964.1"; exon_number "1"; scaffold_1136 StringTie exon 76098 76203 1000 + . gene_id "MSTRG.7985"; transcript_id "MSTRG.7985.1"; exon_number "1"; scaffold_1136 StringTie exon 76336 76386 1000 + . gene_id "MSTRG.7985"; transcript_id "MSTRG.7985.1"; exon_number "2"; scaffold_1136 StringTie exon 76531 76617 1000 + . gene_id "MSTRG.7985"; transcript_id "MSTRG.7985.1"; exon_number "3"; scaffold_1136 StringTie exon 76731 76808 1000 + . gene_id "MSTRG.7985"; transcript_id "MSTRG.7985.1"; exon_number "4"; scaffold_1136 StringTie exon 260938 261107 1000 + . gene_id "MSTRG.8004"; transcript_id "MSTRG.8004.1"; exon_number "1"; scaffold_1136 StringTie exon 262375 262478 1000 + . gene_id "MSTRG.8004"; transcript_id "MSTRG.8004.1"; exon_number "2"; scaffold_1136 StringTie exon 262620 262746 1000 + . gene_id "MSTRG.8004"; transcript_id "MSTRG.8004.1"; exon_number "3"; scaffold_1136 StringTie exon 262920 263334 1000 + . gene_id "MSTRG.8004"; transcript_id "MSTRG.8004.1"; exon_number "4"; scaffold_1136 StringTie exon 291414 291632 1000 . . gene_id "MSTRG.8008"; transcript_id "MSTRG.8008.1"; exon_number "1"; scaffold_1137 StringTie exon 156014 156240 1000 . . gene_id "MSTRG.8038"; transcript_id "MSTRG.8038.1"; exon_number "1"; scaffold_1137 StringTie exon 283714 284109 1000 - . gene_id "MSTRG.8050"; transcript_id "MSTRG.8050.1"; exon_number "1"; scaffold_1137 StringTie exon 284222 284453 1000 - . gene_id "MSTRG.8050"; transcript_id "MSTRG.8050.1"; exon_number "2"; scaffold_1137 StringTie exon 288273 288598 1000 - . gene_id "MSTRG.8050"; transcript_id "MSTRG.8050.1"; exon_number "3"; scaffold_1137 StringTie exon 291873 292064 1000 - . gene_id "MSTRG.8050"; transcript_id "MSTRG.8050.1"; exon_number "4"; scaffold_1137 StringTie exon 312247 312463 1000 . . gene_id "MSTRG.8053"; transcript_id "MSTRG.8053.1"; exon_number "1"; scaffold_11374 StringTie exon 13823 14079 1000 . . gene_id "MSTRG.8065"; transcript_id "MSTRG.8065.1"; exon_number "1"; scaffold_1138 StringTie exon 252746 253019 1000 . . gene_id "MSTRG.8083"; transcript_id "MSTRG.8083.1"; exon_number "1"; scaffold_11380 StringTie exon 1527 1733 1000 . . gene_id "MSTRG.8087"; transcript_id "MSTRG.8087.1"; exon_number "1"; scaffold_1139 StringTie exon 153540 153755 1000 . . gene_id "MSTRG.8118"; transcript_id "MSTRG.8118.1"; exon_number "1"; scaffold_1139 StringTie exon 156638 157087 1000 + . gene_id "MSTRG.8119"; transcript_id "MSTRG.8119.1"; exon_number "1"; scaffold_1139 StringTie exon 157507 157692 1000 + . gene_id "MSTRG.8119"; transcript_id "MSTRG.8119.1"; exon_number "2"; scaffold_1139 StringTie exon 268948 269151 1000 . . gene_id "MSTRG.8132"; transcript_id "MSTRG.8132.1"; exon_number "1"; scaffold_1139 StringTie exon 282103 282463 1000 . . gene_id "MSTRG.8134"; transcript_id "MSTRG.8134.1"; exon_number "1"; scaffold_1139 StringTie exon 311335 312076 1000 . . gene_id "MSTRG.8138"; transcript_id "MSTRG.8138.1"; exon_number "1"; scaffold_114 StringTie exon 50486 50704 1000 . . gene_id "MSTRG.8161"; transcript_id "MSTRG.8161.1"; exon_number "1"; scaffold_114 StringTie exon 79042 79769 1000 . . gene_id "MSTRG.8164"; transcript_id "MSTRG.8164.1"; exon_number "1"; scaffold_114 StringTie exon 287820 288089 1000 . . gene_id "MSTRG.8185"; transcript_id "MSTRG.8185.1"; exon_number "1"; scaffold_114 StringTie exon 746126 746499 1000 . . gene_id "MSTRG.8234"; transcript_id "MSTRG.8234.1"; exon_number "1"; scaffold_114 StringTie exon 749798 751328 1000 . . gene_id "MSTRG.8237"; transcript_id "MSTRG.8237.1"; exon_number "1"; scaffold_114 StringTie exon 792095 792393 1000 . . gene_id "MSTRG.8238"; transcript_id "MSTRG.8238.1"; exon_number "1"; scaffold_114 StringTie exon 1095058 1095356 1000 . . gene_id "MSTRG.8260"; transcript_id "MSTRG.8260.1"; exon_number "1"; scaffold_114 StringTie exon 1209570 1209845 1000 . . gene_id "MSTRG.8267"; transcript_id "MSTRG.8267.1"; exon_number "1"; scaffold_114 StringTie exon 1464937 1465777 1000 . . gene_id "MSTRG.8285"; transcript_id "MSTRG.8285.1"; exon_number "1"; scaffold_1140 StringTie exon 9673 9994 1000 + . gene_id "MSTRG.8298"; transcript_id "MSTRG.8298.1"; exon_number "1"; scaffold_1140 StringTie exon 10082 10156 1000 + . gene_id "MSTRG.8298"; transcript_id "MSTRG.8298.1"; exon_number "2"; scaffold_1140 StringTie exon 10361 10664 1000 + . gene_id "MSTRG.8298"; transcript_id "MSTRG.8298.1"; exon_number "3"; scaffold_1140 StringTie exon 12042 12314 1000 . . gene_id "MSTRG.8299"; transcript_id "MSTRG.8299.1"; exon_number "1"; scaffold_1140 StringTie exon 21833 22067 1000 . . gene_id "MSTRG.8304"; transcript_id "MSTRG.8304.1"; exon_number "1"; scaffold_1140 StringTie exon 228947 229452 1000 - . gene_id "MSTRG.8321"; transcript_id "MSTRG.8321.1"; exon_number "1"; scaffold_1140 StringTie exon 229665 229684 1000 - . gene_id "MSTRG.8321"; transcript_id "MSTRG.8321.1"; exon_number "2"; scaffold_11406 StringTie exon 9714 9972 1000 . . gene_id "MSTRG.8340"; transcript_id "MSTRG.8340.1"; exon_number "1"; scaffold_11407 StringTie exon 11155 11395 1000 . . gene_id "MSTRG.8342"; transcript_id "MSTRG.8342.1"; exon_number "1"; scaffold_11407 StringTie exon 16547 16856 1000 . . gene_id "MSTRG.8343"; transcript_id "MSTRG.8343.1"; exon_number "1"; scaffold_1141 StringTie exon 184263 184525 1000 . . gene_id "MSTRG.8354"; transcript_id "MSTRG.8354.1"; exon_number "1"; scaffold_11427 StringTie exon 14900 15130 1000 . . gene_id "MSTRG.8389"; transcript_id "MSTRG.8389.1"; exon_number "1"; scaffold_1143 StringTie exon 242791 243052 1000 . . gene_id "MSTRG.8413"; transcript_id "MSTRG.8413.1"; exon_number "1"; scaffold_11436 StringTie exon 482 695 1000 . . gene_id "MSTRG.8426"; transcript_id "MSTRG.8426.1"; exon_number "1"; scaffold_1144 StringTie exon 146898 147254 1000 . . gene_id "MSTRG.8464"; transcript_id "MSTRG.8464.1"; exon_number "1"; scaffold_1144 StringTie exon 225069 225950 1000 . . gene_id "MSTRG.8476"; transcript_id "MSTRG.8476.1"; exon_number "1"; scaffold_11445 StringTie exon 4011 4462 1000 . . gene_id "MSTRG.8504"; transcript_id "MSTRG.8504.1"; exon_number "1"; scaffold_1145 StringTie exon 308951 309238 1000 . . gene_id "MSTRG.8528"; transcript_id "MSTRG.8528.1"; exon_number "1"; scaffold_11455 StringTie exon 9465 9883 1000 . . gene_id "MSTRG.8540"; transcript_id "MSTRG.8540.1"; exon_number "1"; scaffold_1146 StringTie exon 260406 260791 1000 . . gene_id "MSTRG.8568"; transcript_id "MSTRG.8568.1"; exon_number "1"; scaffold_11464 StringTie exon 15036 15236 1000 . . gene_id "MSTRG.8576"; transcript_id "MSTRG.8576.1"; exon_number "1"; scaffold_11465 StringTie exon 18568 18891 1000 . . gene_id "MSTRG.8577"; transcript_id "MSTRG.8577.1"; exon_number "1"; scaffold_11472 StringTie exon 1523 1911 1000 . . gene_id "MSTRG.8621"; transcript_id "MSTRG.8621.1"; exon_number "1"; scaffold_1148 StringTie exon 56655 56966 1000 - . gene_id "MSTRG.8636"; transcript_id "MSTRG.8636.1"; exon_number "1"; scaffold_1148 StringTie exon 57169 57242 1000 - . gene_id "MSTRG.8636"; transcript_id "MSTRG.8636.1"; exon_number "2"; scaffold_1148 StringTie exon 57369 57466 1000 - . gene_id "MSTRG.8636"; transcript_id "MSTRG.8636.1"; exon_number "3"; scaffold_1148 StringTie exon 57553 57667 1000 - . gene_id "MSTRG.8636"; transcript_id "MSTRG.8636.1"; exon_number "4"; scaffold_1148 StringTie exon 57797 57880 1000 - . gene_id "MSTRG.8636"; transcript_id "MSTRG.8636.1"; exon_number "5"; scaffold_1148 StringTie exon 69149 69576 1000 . . gene_id "MSTRG.8639"; transcript_id "MSTRG.8639.1"; exon_number "1"; scaffold_11483 StringTie exon 18268 18473 1000 - . gene_id "MSTRG.8668"; transcript_id "MSTRG.8668.1"; exon_number "1"; scaffold_11483 StringTie exon 18605 18666 1000 - . gene_id "MSTRG.8668"; transcript_id "MSTRG.8668.1"; exon_number "2"; scaffold_11485 StringTie exon 2226 2456 1000 . . gene_id "MSTRG.8671"; transcript_id "MSTRG.8671.1"; exon_number "1"; scaffold_11485 StringTie exon 10545 10942 1000 . . gene_id "MSTRG.8673"; transcript_id "MSTRG.8673.1"; exon_number "1"; scaffold_1149 StringTie exon 216839 217015 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "1"; scaffold_1149 StringTie exon 217151 217305 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "2"; scaffold_1149 StringTie exon 221066 221216 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "3"; scaffold_1149 StringTie exon 221308 221476 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "4"; scaffold_1149 StringTie exon 221696 221763 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "5"; scaffold_1149 StringTie exon 221976 222191 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "6"; scaffold_1149 StringTie exon 229253 229410 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "7"; scaffold_1149 StringTie exon 229901 229996 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "8"; scaffold_1149 StringTie exon 230116 230171 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "9"; scaffold_1149 StringTie exon 230310 230366 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "10"; scaffold_1149 StringTie exon 230881 230998 1000 + . gene_id "MSTRG.8684"; transcript_id "MSTRG.8684.1"; exon_number "11"; scaffold_1149 StringTie exon 268442 268573 1000 - . gene_id "MSTRG.8692"; transcript_id "MSTRG.8692.1"; exon_number "1"; scaffold_1149 StringTie exon 268687 268764 1000 - . gene_id "MSTRG.8692"; transcript_id "MSTRG.8692.1"; exon_number "2"; scaffold_1149 StringTie exon 273260 273299 1000 - . gene_id "MSTRG.8692"; transcript_id "MSTRG.8692.1"; exon_number "3"; scaffold_115 StringTie exon 186632 186872 1000 . . gene_id "MSTRG.8721"; transcript_id "MSTRG.8721.1"; exon_number "1"; scaffold_115 StringTie exon 907494 907777 1000 . . gene_id "MSTRG.8761"; transcript_id "MSTRG.8761.1"; exon_number "1"; scaffold_115 StringTie exon 1191473 1191734 1000 . . gene_id "MSTRG.8781"; transcript_id "MSTRG.8781.1"; exon_number "1"; scaffold_1150 StringTie exon 51778 52313 1000 . . gene_id "MSTRG.8810"; transcript_id "MSTRG.8810.1"; exon_number "1"; scaffold_11501 StringTie exon 1201 1414 1000 . . gene_id "MSTRG.8832"; transcript_id "MSTRG.8832.1"; exon_number "1"; scaffold_1151 StringTie exon 241387 241851 1000 . . gene_id "MSTRG.8865"; transcript_id "MSTRG.8865.1"; exon_number "1"; scaffold_11516 StringTie exon 10526 10930 1000 - . gene_id "MSTRG.8884"; transcript_id "MSTRG.8884.1"; exon_number "1"; scaffold_11516 StringTie exon 12102 12257 1000 - . gene_id "MSTRG.8884"; transcript_id "MSTRG.8884.1"; exon_number "2"; scaffold_11516 StringTie exon 15489 15574 1000 - . gene_id "MSTRG.8884"; transcript_id "MSTRG.8884.1"; exon_number "3"; scaffold_1153 StringTie exon 135122 135382 1000 . . gene_id "MSTRG.8922"; transcript_id "MSTRG.8922.1"; exon_number "1"; scaffold_1153 StringTie exon 267215 267502 1000 . . gene_id "MSTRG.8936"; transcript_id "MSTRG.8936.1"; exon_number "1"; scaffold_1154 StringTie exon 73731 74034 1000 . . gene_id "MSTRG.8953"; transcript_id "MSTRG.8953.1"; exon_number "1"; scaffold_11541 StringTie exon 15760 16272 1000 . . gene_id "MSTRG.8962"; transcript_id "MSTRG.8962.1"; exon_number "1"; scaffold_11548 StringTie exon 794 993 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.2"; exon_number "1"; scaffold_11548 StringTie exon 1132 1278 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.2"; exon_number "2"; scaffold_11548 StringTie exon 1488 1699 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.2"; exon_number "3"; scaffold_11548 StringTie exon 2653 2753 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.2"; exon_number "4"; scaffold_11548 StringTie exon 8944 9062 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.2"; exon_number "5"; scaffold_11548 StringTie exon 16799 16901 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.2"; exon_number "6"; scaffold_11548 StringTie exon 907 993 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "1"; scaffold_11548 StringTie exon 1132 1278 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "2"; scaffold_11548 StringTie exon 1488 1699 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "3"; scaffold_11548 StringTie exon 2653 2753 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "4"; scaffold_11548 StringTie exon 2845 2963 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "5"; scaffold_11548 StringTie exon 9275 9451 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "6"; scaffold_11548 StringTie exon 17091 17122 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "7"; scaffold_11548 StringTie exon 17231 17328 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "8"; scaffold_11548 StringTie exon 17437 17706 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.6"; exon_number "9"; scaffold_11548 StringTie exon 907 993 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.7"; exon_number "1"; scaffold_11548 StringTie exon 1132 1278 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.7"; exon_number "2"; scaffold_11548 StringTie exon 1488 1699 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.7"; exon_number "3"; scaffold_11548 StringTie exon 8752 8852 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.7"; exon_number "4"; scaffold_11548 StringTie exon 8944 9062 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.7"; exon_number "5"; scaffold_11548 StringTie exon 16799 16967 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.7"; exon_number "6"; scaffold_11548 StringTie exon 3644 3739 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.16"; exon_number "1"; scaffold_11548 StringTie exon 9937 9965 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.16"; exon_number "2"; scaffold_11548 StringTie exon 10128 10149 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.16"; exon_number "3"; scaffold_11548 StringTie exon 10269 10296 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.16"; exon_number "4"; scaffold_11548 StringTie exon 10595 10679 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.16"; exon_number "5"; scaffold_11548 StringTie exon 18590 18641 1000 + . gene_id "MSTRG.8978"; transcript_id "MSTRG.8978.16"; exon_number "6"; scaffold_11549 StringTie exon 13370 13577 1000 . . gene_id "MSTRG.8980"; transcript_id "MSTRG.8980.1"; exon_number "1"; scaffold_1155 StringTie exon 243680 243955 1000 . . gene_id "MSTRG.8994"; transcript_id "MSTRG.8994.1"; exon_number "1"; scaffold_11550 StringTie exon 15527 15733 1000 . . gene_id "MSTRG.8998"; transcript_id "MSTRG.8998.1"; exon_number "1"; scaffold_11559 StringTie exon 2477 2846 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "1"; scaffold_11559 StringTie exon 2951 3076 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "2"; scaffold_11559 StringTie exon 3318 3424 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "3"; scaffold_11559 StringTie exon 3508 3576 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "4"; scaffold_11559 StringTie exon 3672 3753 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "5"; scaffold_11559 StringTie exon 3867 3922 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "6"; scaffold_11559 StringTie exon 4140 4226 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "7"; scaffold_11559 StringTie exon 4357 4461 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "8"; scaffold_11559 StringTie exon 4546 4616 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "9"; scaffold_11559 StringTie exon 4834 4939 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "10"; scaffold_11559 StringTie exon 5328 5359 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "11"; scaffold_11559 StringTie exon 5551 5670 1000 - . gene_id "MSTRG.9011"; transcript_id "MSTRG.9011.1"; exon_number "12"; scaffold_1156 StringTie exon 36640 36846 1000 . . gene_id "MSTRG.9012"; transcript_id "MSTRG.9012.1"; exon_number "1"; scaffold_11567 StringTie exon 13177 13757 1000 . . gene_id "MSTRG.9047"; transcript_id "MSTRG.9047.1"; exon_number "1"; scaffold_1157 StringTie exon 147638 147727 1000 + . gene_id "MSTRG.9062"; transcript_id "MSTRG.9062.1"; exon_number "1"; scaffold_1157 StringTie exon 148229 148371 1000 + . gene_id "MSTRG.9062"; transcript_id "MSTRG.9062.1"; exon_number "2"; scaffold_11578 StringTie exon 10852 11262 1000 . . gene_id "MSTRG.9088"; transcript_id "MSTRG.9088.1"; exon_number "1"; scaffold_1158 StringTie exon 283048 283263 1000 . . gene_id "MSTRG.9103"; transcript_id "MSTRG.9103.1"; exon_number "1"; scaffold_1159 StringTie exon 52236 52266 1000 + . gene_id "MSTRG.9135"; transcript_id "MSTRG.9135.1"; exon_number "1"; scaffold_1159 StringTie exon 52532 52615 1000 + . gene_id "MSTRG.9135"; transcript_id "MSTRG.9135.1"; exon_number "2"; scaffold_1159 StringTie exon 53706 53840 1000 + . gene_id "MSTRG.9135"; transcript_id "MSTRG.9135.1"; exon_number "3"; scaffold_1159 StringTie exon 53977 54068 1000 + . gene_id "MSTRG.9135"; transcript_id "MSTRG.9135.1"; exon_number "4"; scaffold_1159 StringTie exon 54971 55071 1000 + . gene_id "MSTRG.9135"; transcript_id "MSTRG.9135.1"; exon_number "5"; scaffold_1159 StringTie exon 55163 55341 1000 + . gene_id "MSTRG.9135"; transcript_id "MSTRG.9135.1"; exon_number "6"; scaffold_1159 StringTie exon 142854 143094 1000 . . gene_id "MSTRG.9146"; transcript_id "MSTRG.9146.1"; exon_number "1"; scaffold_1159 StringTie exon 245796 246041 1000 - . gene_id "MSTRG.9157"; transcript_id "MSTRG.9157.1"; exon_number "1"; scaffold_11596 StringTie exon 5514 6730 1000 . . gene_id "MSTRG.9180"; transcript_id "MSTRG.9180.1"; exon_number "1"; scaffold_11598 StringTie exon 16695 17160 1000 . . gene_id "MSTRG.9185"; transcript_id "MSTRG.9185.1"; exon_number "1"; scaffold_116 StringTie exon 4831 5069 1000 . . gene_id "MSTRG.9187"; transcript_id "MSTRG.9187.1"; exon_number "1"; scaffold_116 StringTie exon 53006 53116 1000 - . gene_id "MSTRG.9200"; transcript_id "MSTRG.9200.1"; exon_number "1"; scaffold_116 StringTie exon 53333 53449 1000 - . gene_id "MSTRG.9200"; transcript_id "MSTRG.9200.1"; exon_number "2"; scaffold_116 StringTie exon 56438 56788 1000 - . gene_id "MSTRG.9200"; transcript_id "MSTRG.9200.1"; exon_number "3"; scaffold_116 StringTie exon 187909 188921 1000 . . gene_id "MSTRG.9214"; transcript_id "MSTRG.9214.1"; exon_number "1"; scaffold_116 StringTie exon 283789 283989 1000 . . gene_id "MSTRG.9230"; transcript_id "MSTRG.9230.1"; exon_number "1"; scaffold_116 StringTie exon 498796 499024 1000 . . gene_id "MSTRG.9261"; transcript_id "MSTRG.9261.1"; exon_number "1"; scaffold_116 StringTie exon 630649 630931 1000 + . gene_id "MSTRG.9279"; transcript_id "MSTRG.9279.1"; exon_number "1"; scaffold_116 StringTie exon 631010 631519 1000 + . gene_id "MSTRG.9279"; transcript_id "MSTRG.9279.1"; exon_number "2"; scaffold_116 StringTie exon 631666 631859 1000 + . gene_id "MSTRG.9279"; transcript_id "MSTRG.9279.1"; exon_number "3"; scaffold_116 StringTie exon 633218 633268 1000 + . gene_id "MSTRG.9279"; transcript_id "MSTRG.9279.1"; exon_number "4"; scaffold_116 StringTie exon 736878 737226 1000 . . gene_id "MSTRG.9299"; transcript_id "MSTRG.9299.1"; exon_number "1"; scaffold_116 StringTie exon 996734 997043 1000 . . gene_id "MSTRG.9311"; transcript_id "MSTRG.9311.1"; exon_number "1"; scaffold_116 StringTie exon 1248989 1249209 1000 . . gene_id "MSTRG.9318"; transcript_id "MSTRG.9318.1"; exon_number "1"; scaffold_116 StringTie exon 1413008 1413571 1000 . . gene_id "MSTRG.9336"; transcript_id "MSTRG.9336.1"; exon_number "1"; scaffold_116 StringTie exon 1414812 1415125 1000 . . gene_id "MSTRG.9337"; transcript_id "MSTRG.9337.1"; exon_number "1"; scaffold_116 StringTie exon 1602515 1602743 1000 . . gene_id "MSTRG.9356"; transcript_id "MSTRG.9356.1"; exon_number "1"; scaffold_1160 StringTie exon 126847 127062 1000 . . gene_id "MSTRG.9369"; transcript_id "MSTRG.9369.1"; exon_number "1"; scaffold_11612 StringTie exon 11500 11778 1000 . . gene_id "MSTRG.9434"; transcript_id "MSTRG.9434.1"; exon_number "1"; scaffold_11614 StringTie exon 2449 2762 1000 . . gene_id "MSTRG.9435"; transcript_id "MSTRG.9435.1"; exon_number "1"; scaffold_1162 StringTie exon 89889 90554 1000 + . gene_id "MSTRG.9447"; transcript_id "MSTRG.9447.1"; exon_number "1"; scaffold_1162 StringTie exon 126353 127116 1000 + . gene_id "MSTRG.9447"; transcript_id "MSTRG.9447.1"; exon_number "2"; scaffold_11623 StringTie exon 4844 5060 1000 . . gene_id "MSTRG.9476"; transcript_id "MSTRG.9476.1"; exon_number "1"; scaffold_11624 StringTie exon 3464 3478 1000 + . gene_id "MSTRG.9480"; transcript_id "MSTRG.9480.1"; exon_number "1"; scaffold_11624 StringTie exon 3719 3810 1000 + . gene_id "MSTRG.9480"; transcript_id "MSTRG.9480.1"; exon_number "2"; scaffold_11624 StringTie exon 5281 5391 1000 + . gene_id "MSTRG.9480"; transcript_id "MSTRG.9480.1"; exon_number "3"; scaffold_11624 StringTie exon 5813 6159 1000 + . gene_id "MSTRG.9480"; transcript_id "MSTRG.9480.1"; exon_number "4"; scaffold_11626 StringTie exon 16540 16786 1000 . . gene_id "MSTRG.9485"; transcript_id "MSTRG.9485.1"; exon_number "1"; scaffold_1163 StringTie exon 76889 77378 1000 - . gene_id "MSTRG.9494"; transcript_id "MSTRG.9494.1"; exon_number "1"; scaffold_1163 StringTie exon 77536 77575 1000 - . gene_id "MSTRG.9494"; transcript_id "MSTRG.9494.1"; exon_number "2"; scaffold_1163 StringTie exon 77716 77785 1000 - . gene_id "MSTRG.9494"; transcript_id "MSTRG.9494.1"; exon_number "3"; scaffold_1163 StringTie exon 78024 78109 1000 - . gene_id "MSTRG.9494"; transcript_id "MSTRG.9494.1"; exon_number "4"; scaffold_1163 StringTie exon 78324 78451 1000 - . gene_id "MSTRG.9494"; transcript_id "MSTRG.9494.1"; exon_number "5"; scaffold_1163 StringTie exon 78943 79069 1000 - . gene_id "MSTRG.9494"; transcript_id "MSTRG.9494.1"; exon_number "6"; scaffold_1163 StringTie exon 79429 79500 1000 - . gene_id "MSTRG.9494"; transcript_id "MSTRG.9494.1"; exon_number "7"; scaffold_1163 StringTie exon 147830 148064 1000 . . gene_id "MSTRG.9497"; transcript_id "MSTRG.9497.1"; exon_number "1"; scaffold_1163 StringTie exon 177980 178318 1000 . . gene_id "MSTRG.9502"; transcript_id "MSTRG.9502.1"; exon_number "1"; scaffold_1166 StringTie exon 227640 227931 1000 . . gene_id "MSTRG.9614"; transcript_id "MSTRG.9614.1"; exon_number "1"; scaffold_11669 StringTie exon 9026 9258 1000 . . gene_id "MSTRG.9630"; transcript_id "MSTRG.9630.1"; exon_number "1"; scaffold_11669 StringTie exon 17448 17680 1000 . . gene_id "MSTRG.9631"; transcript_id "MSTRG.9631.1"; exon_number "1"; scaffold_1167 StringTie exon 1371 1850 1000 . . gene_id "MSTRG.9632"; transcript_id "MSTRG.9632.1"; exon_number "1"; scaffold_1167 StringTie exon 159869 160102 1000 . . gene_id "MSTRG.9637"; transcript_id "MSTRG.9637.1"; exon_number "1"; scaffold_1167 StringTie exon 233878 234162 1000 . . gene_id "MSTRG.9641"; transcript_id "MSTRG.9641.1"; exon_number "1"; scaffold_1167 StringTie exon 250053 250302 1000 . . gene_id "MSTRG.9642"; transcript_id "MSTRG.9642.1"; exon_number "1"; scaffold_1168 StringTie exon 270395 270705 1000 . . gene_id "MSTRG.9677"; transcript_id "MSTRG.9677.1"; exon_number "1"; scaffold_11685 StringTie exon 3274 3486 1000 . . gene_id "MSTRG.9690"; transcript_id "MSTRG.9690.1"; exon_number "1"; scaffold_1169 StringTie exon 194220 194621 1000 . . gene_id "MSTRG.9706"; transcript_id "MSTRG.9706.1"; exon_number "1"; scaffold_11690 StringTie exon 574 840 1000 . . gene_id "MSTRG.9711"; transcript_id "MSTRG.9711.1"; exon_number "1"; scaffold_117 StringTie exon 462785 462881 1000 - . gene_id "MSTRG.9743"; transcript_id "MSTRG.9743.1"; exon_number "1"; scaffold_117 StringTie exon 463013 463194 1000 - . gene_id "MSTRG.9743"; transcript_id "MSTRG.9743.1"; exon_number "2"; scaffold_117 StringTie exon 653471 653671 1000 . . gene_id "MSTRG.9756"; transcript_id "MSTRG.9756.1"; exon_number "1"; scaffold_117 StringTie exon 695009 695407 1000 . . gene_id "MSTRG.9758"; transcript_id "MSTRG.9758.1"; exon_number "1"; scaffold_117 StringTie exon 1129911 1130527 1000 . . gene_id "MSTRG.9792"; transcript_id "MSTRG.9792.1"; exon_number "1"; scaffold_117 StringTie exon 1383802 1384058 1000 . . gene_id "MSTRG.9815"; transcript_id "MSTRG.9815.1"; exon_number "1"; scaffold_1170 StringTie exon 125496 127216 1000 - . gene_id "MSTRG.9838"; transcript_id "MSTRG.9838.1"; exon_number "1"; scaffold_1170 StringTie exon 129069 129215 1000 - . gene_id "MSTRG.9838"; transcript_id "MSTRG.9838.1"; exon_number "2"; scaffold_1170 StringTie exon 130438 130563 1000 - . gene_id "MSTRG.9838"; transcript_id "MSTRG.9838.1"; exon_number "3"; scaffold_1171 StringTie exon 170286 170485 1000 . . gene_id "MSTRG.9886"; transcript_id "MSTRG.9886.1"; exon_number "1"; scaffold_1172 StringTie exon 100327 100785 1000 . . gene_id "MSTRG.9913"; transcript_id "MSTRG.9913.1"; exon_number "1"; scaffold_11721 StringTie exon 3 481 1000 . . gene_id "MSTRG.9928"; transcript_id "MSTRG.9928.1"; exon_number "1"; scaffold_11737 StringTie exon 12326 12638 1000 . . gene_id "MSTRG.9957"; transcript_id "MSTRG.9957.1"; exon_number "1"; scaffold_1174 StringTie exon 60167 61547 1000 . . gene_id "MSTRG.9966"; transcript_id "MSTRG.9966.1"; exon_number "1"; scaffold_1174 StringTie exon 270885 271162 1000 . . gene_id "MSTRG.9979"; transcript_id "MSTRG.9979.1"; exon_number "1"; scaffold_11751 StringTie exon 1193 1428 1000 . . gene_id "MSTRG.10009"; transcript_id "MSTRG.10009.1"; exon_number "1"; scaffold_11755 StringTie exon 5463 5699 1000 . . gene_id "MSTRG.10017"; transcript_id "MSTRG.10017.1"; exon_number "1"; scaffold_11758 StringTie exon 7133 7156 1000 - . gene_id "MSTRG.10021"; transcript_id "MSTRG.10021.1"; exon_number "1"; scaffold_11758 StringTie exon 7227 7365 1000 - . gene_id "MSTRG.10021"; transcript_id "MSTRG.10021.1"; exon_number "2"; scaffold_11758 StringTie exon 8183 8237 1000 - . gene_id "MSTRG.10021"; transcript_id "MSTRG.10021.1"; exon_number "3"; scaffold_1176 StringTie exon 50359 50746 1000 . . gene_id "MSTRG.10029"; transcript_id "MSTRG.10029.1"; exon_number "1"; scaffold_1176 StringTie exon 219854 220452 1000 + . gene_id "MSTRG.10049"; transcript_id "MSTRG.10049.1"; exon_number "1"; scaffold_1176 StringTie exon 220556 220565 1000 + . gene_id "MSTRG.10049"; transcript_id "MSTRG.10049.1"; exon_number "2"; scaffold_1177 StringTie exon 297052 297244 1000 + . gene_id "MSTRG.10095"; transcript_id "MSTRG.10095.1"; exon_number "1"; scaffold_1177 StringTie exon 297409 297427 1000 + . gene_id "MSTRG.10095"; transcript_id "MSTRG.10095.1"; exon_number "2"; scaffold_11772 StringTie exon 14413 15882 1000 . . gene_id "MSTRG.10104"; transcript_id "MSTRG.10104.1"; exon_number "1"; scaffold_11772 StringTie exon 16872 17152 1000 . . gene_id "MSTRG.10105"; transcript_id "MSTRG.10105.1"; exon_number "1"; scaffold_11785 StringTie exon 10445 11322 1000 . . gene_id "MSTRG.10136"; transcript_id "MSTRG.10136.1"; exon_number "1"; scaffold_1179 StringTie exon 23286 24101 1000 . . gene_id "MSTRG.10147"; transcript_id "MSTRG.10147.1"; exon_number "1"; scaffold_1179 StringTie exon 30359 30606 1000 . . gene_id "MSTRG.10148"; transcript_id "MSTRG.10148.1"; exon_number "1"; scaffold_1179 StringTie exon 96349 96506 1000 - . gene_id "MSTRG.10154"; transcript_id "MSTRG.10154.2"; exon_number "1"; scaffold_1179 StringTie exon 102567 102628 1000 - . gene_id "MSTRG.10154"; transcript_id "MSTRG.10154.2"; exon_number "2"; scaffold_1179 StringTie exon 240116 240316 1000 . . gene_id "MSTRG.10166"; transcript_id "MSTRG.10166.1"; exon_number "1"; scaffold_118 StringTie exon 51485 52031 1000 + . gene_id "MSTRG.10194"; transcript_id "MSTRG.10194.1"; exon_number "1"; scaffold_118 StringTie exon 57412 57498 1000 + . gene_id "MSTRG.10194"; transcript_id "MSTRG.10194.1"; exon_number "2"; scaffold_118 StringTie exon 59808 60058 1000 + . gene_id "MSTRG.10194"; transcript_id "MSTRG.10194.1"; exon_number "3"; scaffold_118 StringTie exon 482047 482061 1000 - . gene_id "MSTRG.10238"; transcript_id "MSTRG.10238.1"; exon_number "1"; scaffold_118 StringTie exon 483899 484019 1000 - . gene_id "MSTRG.10238"; transcript_id "MSTRG.10238.1"; exon_number "2"; scaffold_118 StringTie exon 488319 488421 1000 - . gene_id "MSTRG.10238"; transcript_id "MSTRG.10238.1"; exon_number "3"; scaffold_118 StringTie exon 488520 488646 1000 - . gene_id "MSTRG.10238"; transcript_id "MSTRG.10238.1"; exon_number "4"; scaffold_118 StringTie exon 869812 869985 1000 - . gene_id "MSTRG.10259"; transcript_id "MSTRG.10259.1"; exon_number "1"; scaffold_118 StringTie exon 870117 870257 1000 - . gene_id "MSTRG.10259"; transcript_id "MSTRG.10259.1"; exon_number "2"; scaffold_118 StringTie exon 870794 870942 1000 - . gene_id "MSTRG.10259"; transcript_id "MSTRG.10259.1"; exon_number "3"; scaffold_118 StringTie exon 897397 897641 1000 - . gene_id "MSTRG.10266"; transcript_id "MSTRG.10266.1"; exon_number "1"; scaffold_118 StringTie exon 897760 897785 1000 - . gene_id "MSTRG.10266"; transcript_id "MSTRG.10266.1"; exon_number "2"; scaffold_118 StringTie exon 973375 973703 1000 . . gene_id "MSTRG.10273"; transcript_id "MSTRG.10273.1"; exon_number "1"; scaffold_1180 StringTie exon 122944 123447 1000 . . gene_id "MSTRG.10349"; transcript_id "MSTRG.10349.1"; exon_number "1"; scaffold_1181 StringTie exon 122684 122911 1000 + . gene_id "MSTRG.10381"; transcript_id "MSTRG.10381.1"; exon_number "1"; scaffold_1181 StringTie exon 123952 124096 1000 + . gene_id "MSTRG.10381"; transcript_id "MSTRG.10381.1"; exon_number "2"; scaffold_11821 StringTie exon 15603 15951 1000 . . gene_id "MSTRG.10414"; transcript_id "MSTRG.10414.1"; exon_number "1"; scaffold_11823 StringTie exon 13418 13665 1000 . . gene_id "MSTRG.10416"; transcript_id "MSTRG.10416.1"; exon_number "1"; scaffold_11826 StringTie exon 17788 18132 1000 . . gene_id "MSTRG.10419"; transcript_id "MSTRG.10419.1"; exon_number "1"; scaffold_11827 StringTie exon 231 464 1000 . . gene_id "MSTRG.10420"; transcript_id "MSTRG.10420.1"; exon_number "1"; scaffold_1183 StringTie exon 201832 202036 1000 . . gene_id "MSTRG.10437"; transcript_id "MSTRG.10437.1"; exon_number "1"; scaffold_1183 StringTie exon 260718 261011 1000 + . gene_id "MSTRG.10443"; transcript_id "MSTRG.10443.1"; exon_number "1"; scaffold_1183 StringTie exon 265506 266828 1000 + . gene_id "MSTRG.10444"; transcript_id "MSTRG.10444.1"; exon_number "1"; scaffold_1183 StringTie exon 267307 267585 1000 + . gene_id "MSTRG.10444"; transcript_id "MSTRG.10444.1"; exon_number "2"; scaffold_11835 StringTie exon 16217 16609 1000 + . gene_id "MSTRG.10454"; transcript_id "MSTRG.10454.1"; exon_number "1"; scaffold_11835 StringTie exon 16838 17451 1000 + . gene_id "MSTRG.10454"; transcript_id "MSTRG.10454.1"; exon_number "2"; scaffold_1184 StringTie exon 12335 12452 1000 + . gene_id "MSTRG.10461"; transcript_id "MSTRG.10461.1"; exon_number "1"; scaffold_1184 StringTie exon 19686 19845 1000 + . gene_id "MSTRG.10461"; transcript_id "MSTRG.10461.1"; exon_number "2"; scaffold_1184 StringTie exon 22229 22310 1000 + . gene_id "MSTRG.10461"; transcript_id "MSTRG.10461.1"; exon_number "3"; scaffold_1184 StringTie exon 22423 22901 1000 + . gene_id "MSTRG.10461"; transcript_id "MSTRG.10461.1"; exon_number "4"; scaffold_1184 StringTie exon 46636 46927 1000 . . gene_id "MSTRG.10467"; transcript_id "MSTRG.10467.1"; exon_number "1"; scaffold_1184 StringTie exon 82753 83558 1000 . . gene_id "MSTRG.10469"; transcript_id "MSTRG.10469.1"; exon_number "1"; scaffold_1184 StringTie exon 141868 141953 1000 + . gene_id "MSTRG.10473"; transcript_id "MSTRG.10473.1"; exon_number "1"; scaffold_1184 StringTie exon 142174 142298 1000 + . gene_id "MSTRG.10473"; transcript_id "MSTRG.10473.1"; exon_number "2"; scaffold_1184 StringTie exon 265846 266095 1000 . . gene_id "MSTRG.10482"; transcript_id "MSTRG.10482.1"; exon_number "1"; scaffold_1184 StringTie exon 272581 272785 1000 . . gene_id "MSTRG.10484"; transcript_id "MSTRG.10484.1"; exon_number "1"; scaffold_11845 StringTie exon 14851 16312 1000 . . gene_id "MSTRG.10495"; transcript_id "MSTRG.10495.1"; exon_number "1"; scaffold_11849 StringTie exon 4786 4994 1000 . . gene_id "MSTRG.10500"; transcript_id "MSTRG.10500.1"; exon_number "1"; scaffold_1186 StringTie exon 23128 23207 1000 - . gene_id "MSTRG.10532"; transcript_id "MSTRG.10532.1"; exon_number "1"; scaffold_1186 StringTie exon 27043 27147 1000 - . gene_id "MSTRG.10532"; transcript_id "MSTRG.10532.1"; exon_number "2"; scaffold_1186 StringTie exon 27653 27735 1000 - . gene_id "MSTRG.10532"; transcript_id "MSTRG.10532.1"; exon_number "3"; scaffold_1186 StringTie exon 28902 29126 1000 - . gene_id "MSTRG.10532"; transcript_id "MSTRG.10532.1"; exon_number "4"; scaffold_1186 StringTie exon 31685 31811 1000 - . gene_id "MSTRG.10532"; transcript_id "MSTRG.10532.1"; exon_number "5"; scaffold_1186 StringTie exon 47921 48185 1000 . . gene_id "MSTRG.10535"; transcript_id "MSTRG.10535.1"; exon_number "1"; scaffold_1186 StringTie exon 162958 163282 1000 . . gene_id "MSTRG.10542"; transcript_id "MSTRG.10542.1"; exon_number "1"; scaffold_1186 StringTie exon 184519 184591 1000 - . gene_id "MSTRG.10545"; transcript_id "MSTRG.10545.1"; exon_number "1"; scaffold_1186 StringTie exon 187325 187475 1000 - . gene_id "MSTRG.10545"; transcript_id "MSTRG.10545.1"; exon_number "2"; scaffold_1186 StringTie exon 206220 206241 1000 + . gene_id "MSTRG.10550"; transcript_id "MSTRG.10550.1"; exon_number "1"; scaffold_1186 StringTie exon 207032 207152 1000 + . gene_id "MSTRG.10550"; transcript_id "MSTRG.10550.1"; exon_number "2"; scaffold_1186 StringTie exon 207386 207535 1000 + . gene_id "MSTRG.10550"; transcript_id "MSTRG.10550.1"; exon_number "3"; scaffold_1186 StringTie exon 207820 207960 1000 + . gene_id "MSTRG.10550"; transcript_id "MSTRG.10550.1"; exon_number "4"; scaffold_1186 StringTie exon 208161 208240 1000 + . gene_id "MSTRG.10550"; transcript_id "MSTRG.10550.1"; exon_number "5"; scaffold_1186 StringTie exon 208498 208628 1000 + . gene_id "MSTRG.10550"; transcript_id "MSTRG.10550.1"; exon_number "6"; scaffold_1186 StringTie exon 208878 208947 1000 + . gene_id "MSTRG.10550"; transcript_id "MSTRG.10550.1"; exon_number "7"; scaffold_1186 StringTie exon 209631 209770 1000 + . gene_id "MSTRG.10550"; transcript_id "MSTRG.10550.1"; exon_number "8"; scaffold_1186 StringTie exon 214221 214494 1000 . . gene_id "MSTRG.10551"; transcript_id "MSTRG.10551.1"; exon_number "1"; scaffold_1187 StringTie exon 39476 39541 1000 + . gene_id "MSTRG.10576"; transcript_id "MSTRG.10576.1"; exon_number "1"; scaffold_1187 StringTie exon 39827 40104 1000 + . gene_id "MSTRG.10576"; transcript_id "MSTRG.10576.1"; exon_number "2"; scaffold_1187 StringTie exon 158490 160431 1000 . . gene_id "MSTRG.10595"; transcript_id "MSTRG.10595.1"; exon_number "1"; scaffold_11877 StringTie exon 15520 15822 1000 . . gene_id "MSTRG.10620"; transcript_id "MSTRG.10620.1"; exon_number "1"; scaffold_11879 StringTie exon 8780 8960 1000 + . gene_id "MSTRG.10623"; transcript_id "MSTRG.10623.2"; exon_number "1"; scaffold_11879 StringTie exon 9173 9470 1000 + . gene_id "MSTRG.10623"; transcript_id "MSTRG.10623.2"; exon_number "2"; scaffold_1188 StringTie exon 59277 59579 1000 . . gene_id "MSTRG.10634"; transcript_id "MSTRG.10634.1"; exon_number "1"; scaffold_1188 StringTie exon 260038 260535 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "1"; scaffold_1188 StringTie exon 261181 261321 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "2"; scaffold_1188 StringTie exon 261626 261799 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "3"; scaffold_1188 StringTie exon 262623 262735 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "4"; scaffold_1188 StringTie exon 263058 263158 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "5"; scaffold_1188 StringTie exon 266301 266483 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "6"; scaffold_1188 StringTie exon 267511 267630 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "7"; scaffold_1188 StringTie exon 267843 267951 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "8"; scaffold_1188 StringTie exon 268270 268477 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "9"; scaffold_1188 StringTie exon 268950 269081 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "10"; scaffold_1188 StringTie exon 269712 269818 1000 - . gene_id "MSTRG.10647"; transcript_id "MSTRG.10647.1"; exon_number "11"; scaffold_11881 StringTie exon 7624 8042 1000 . . gene_id "MSTRG.10650"; transcript_id "MSTRG.10650.1"; exon_number "1"; scaffold_11884 StringTie exon 119 357 1000 . . gene_id "MSTRG.10657"; transcript_id "MSTRG.10657.1"; exon_number "1"; scaffold_1189 StringTie exon 147033 147162 1000 + . gene_id "MSTRG.10681"; transcript_id "MSTRG.10681.1"; exon_number "1"; scaffold_1189 StringTie exon 147270 147371 1000 + . gene_id "MSTRG.10681"; transcript_id "MSTRG.10681.1"; exon_number "2"; scaffold_1189 StringTie exon 148656 148855 1000 + . gene_id "MSTRG.10681"; transcript_id "MSTRG.10681.1"; exon_number "3"; scaffold_1189 StringTie exon 149049 149113 1000 + . gene_id "MSTRG.10681"; transcript_id "MSTRG.10681.1"; exon_number "4"; scaffold_1189 StringTie exon 154904 158191 1000 . . gene_id "MSTRG.10686"; transcript_id "MSTRG.10686.1"; exon_number "1"; scaffold_1189 StringTie exon 210019 210219 1000 . . gene_id "MSTRG.10692"; transcript_id "MSTRG.10692.1"; exon_number "1"; scaffold_1189 StringTie exon 247440 247677 1000 . . gene_id "MSTRG.10697"; transcript_id "MSTRG.10697.1"; exon_number "1"; scaffold_119 StringTie exon 355627 355671 1000 - . gene_id "MSTRG.10733"; transcript_id "MSTRG.10733.1"; exon_number "1"; scaffold_119 StringTie exon 356781 356906 1000 - . gene_id "MSTRG.10733"; transcript_id "MSTRG.10733.1"; exon_number "2"; scaffold_119 StringTie exon 358610 358842 1000 - . gene_id "MSTRG.10733"; transcript_id "MSTRG.10733.1"; exon_number "3"; scaffold_119 StringTie exon 599236 599443 1000 . . gene_id "MSTRG.10749"; transcript_id "MSTRG.10749.1"; exon_number "1"; scaffold_119 StringTie exon 623374 623783 1000 + . gene_id "MSTRG.10752"; transcript_id "MSTRG.10752.1"; exon_number "1"; scaffold_119 StringTie exon 625677 625894 1000 + . gene_id "MSTRG.10752"; transcript_id "MSTRG.10752.1"; exon_number "2"; scaffold_119 StringTie exon 626085 626455 1000 + . gene_id "MSTRG.10752"; transcript_id "MSTRG.10752.1"; exon_number "3"; scaffold_119 StringTie exon 1122815 1123096 1000 . . gene_id "MSTRG.10786"; transcript_id "MSTRG.10786.1"; exon_number "1"; scaffold_119 StringTie exon 1179148 1179459 1000 . . gene_id "MSTRG.10793"; transcript_id "MSTRG.10793.1"; exon_number "1"; scaffold_119 StringTie exon 1189463 1189725 1000 . . gene_id "MSTRG.10796"; transcript_id "MSTRG.10796.1"; exon_number "1"; scaffold_1190 StringTie exon 270949 271348 1000 . . gene_id "MSTRG.10845"; transcript_id "MSTRG.10845.1"; exon_number "1"; scaffold_11912 StringTie exon 2563 2861 1000 . . gene_id "MSTRG.10885"; transcript_id "MSTRG.10885.1"; exon_number "1"; scaffold_1193 StringTie exon 4372 4725 1000 . . gene_id "MSTRG.10923"; transcript_id "MSTRG.10923.1"; exon_number "1"; scaffold_1193 StringTie exon 151514 151716 1000 . . gene_id "MSTRG.10937"; transcript_id "MSTRG.10937.1"; exon_number "1"; scaffold_1193 StringTie exon 194613 194952 1000 . . gene_id "MSTRG.10943"; transcript_id "MSTRG.10943.1"; exon_number "1"; scaffold_1193 StringTie exon 229108 229346 1000 . . gene_id "MSTRG.10944"; transcript_id "MSTRG.10944.1"; exon_number "1"; scaffold_1194 StringTie exon 212532 212770 1000 . . gene_id "MSTRG.10978"; transcript_id "MSTRG.10978.1"; exon_number "1"; scaffold_1196 StringTie exon 213801 213877 1000 + . gene_id "MSTRG.11048"; transcript_id "MSTRG.11048.1"; exon_number "1"; scaffold_1196 StringTie exon 214041 214143 1000 + . gene_id "MSTRG.11048"; transcript_id "MSTRG.11048.1"; exon_number "2"; scaffold_1196 StringTie exon 214333 214422 1000 + . gene_id "MSTRG.11048"; transcript_id "MSTRG.11048.1"; exon_number "3"; scaffold_1196 StringTie exon 214525 214617 1000 + . gene_id "MSTRG.11048"; transcript_id "MSTRG.11048.1"; exon_number "4"; scaffold_1196 StringTie exon 214705 214788 1000 + . gene_id "MSTRG.11048"; transcript_id "MSTRG.11048.1"; exon_number "5"; scaffold_1196 StringTie exon 214986 215246 1000 + . gene_id "MSTRG.11048"; transcript_id "MSTRG.11048.1"; exon_number "6"; scaffold_1196 StringTie exon 267738 268193 1000 . . gene_id "MSTRG.11051"; transcript_id "MSTRG.11051.1"; exon_number "1"; scaffold_11965 StringTie exon 12 245 1000 . . gene_id "MSTRG.11065"; transcript_id "MSTRG.11065.1"; exon_number "1"; scaffold_1197 StringTie exon 151075 151164 1000 - . gene_id "MSTRG.11097"; transcript_id "MSTRG.11097.1"; exon_number "1"; scaffold_1197 StringTie exon 151464 151490 1000 - . gene_id "MSTRG.11097"; transcript_id "MSTRG.11097.1"; exon_number "2"; scaffold_1197 StringTie exon 152118 152230 1000 - . gene_id "MSTRG.11097"; transcript_id "MSTRG.11097.1"; exon_number "3"; scaffold_11981 StringTie exon 15160 15501 1000 - . gene_id "MSTRG.11130"; transcript_id "MSTRG.11130.1"; exon_number "1"; scaffold_1199 StringTie exon 287310 287778 1000 . . gene_id "MSTRG.11158"; transcript_id "MSTRG.11158.1"; exon_number "1"; scaffold_11996 StringTie exon 17252 17526 1000 . . gene_id "MSTRG.11173"; transcript_id "MSTRG.11173.1"; exon_number "1"; scaffold_12 StringTie exon 125908 126165 1000 . . gene_id "MSTRG.11183"; transcript_id "MSTRG.11183.1"; exon_number "1"; scaffold_12 StringTie exon 209794 210092 1000 . . gene_id "MSTRG.11188"; transcript_id "MSTRG.11188.1"; exon_number "1"; scaffold_12 StringTie exon 718372 718715 1000 . . gene_id "MSTRG.11217"; transcript_id "MSTRG.11217.1"; exon_number "1"; scaffold_12 StringTie exon 783332 783691 1000 . . gene_id "MSTRG.11222"; transcript_id "MSTRG.11222.1"; exon_number "1"; scaffold_12 StringTie exon 935379 935674 1000 . . gene_id "MSTRG.11229"; transcript_id "MSTRG.11229.1"; exon_number "1"; scaffold_12 StringTie exon 963718 964033 1000 . . gene_id "MSTRG.11233"; transcript_id "MSTRG.11233.1"; exon_number "1"; scaffold_12 StringTie exon 1155488 1156075 1000 . . gene_id "MSTRG.11251"; transcript_id "MSTRG.11251.1"; exon_number "1"; scaffold_12 StringTie exon 1285767 1286018 1000 . . gene_id "MSTRG.11256"; transcript_id "MSTRG.11256.1"; exon_number "1"; scaffold_12 StringTie exon 1464524 1464795 1000 . . gene_id "MSTRG.11269"; transcript_id "MSTRG.11269.1"; exon_number "1"; scaffold_12 StringTie exon 1738782 1739152 1000 + . gene_id "MSTRG.11283"; transcript_id "MSTRG.11283.1"; exon_number "1"; scaffold_12 StringTie exon 1745105 1745115 1000 + . gene_id "MSTRG.11283"; transcript_id "MSTRG.11283.1"; exon_number "2"; scaffold_12 StringTie exon 1808922 1809134 1000 . . gene_id "MSTRG.11294"; transcript_id "MSTRG.11294.1"; exon_number "1"; scaffold_12 StringTie exon 1998774 1999133 1000 . . gene_id "MSTRG.11304"; transcript_id "MSTRG.11304.1"; exon_number "1"; scaffold_12 StringTie exon 2023189 2023212 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "1"; scaffold_12 StringTie exon 2023671 2023711 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "2"; scaffold_12 StringTie exon 2024351 2024489 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "3"; scaffold_12 StringTie exon 2024579 2024608 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "4"; scaffold_12 StringTie exon 2024688 2024787 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "5"; scaffold_12 StringTie exon 2024990 2025104 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "6"; scaffold_12 StringTie exon 2025234 2025295 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "7"; scaffold_12 StringTie exon 2025441 2025515 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "8"; scaffold_12 StringTie exon 2025608 2025742 1000 + . gene_id "MSTRG.11310"; transcript_id "MSTRG.11310.1"; exon_number "9"; scaffold_12 StringTie exon 2252334 2252667 1000 . . gene_id "MSTRG.11330"; transcript_id "MSTRG.11330.1"; exon_number "1"; scaffold_12 StringTie exon 2770117 2770364 1000 . . gene_id "MSTRG.11359"; transcript_id "MSTRG.11359.1"; exon_number "1"; scaffold_12 StringTie exon 2954471 2955680 1000 . . gene_id "MSTRG.11371"; transcript_id "MSTRG.11371.1"; exon_number "1"; scaffold_12 StringTie exon 3007862 3008095 1000 . . gene_id "MSTRG.11375"; transcript_id "MSTRG.11375.1"; exon_number "1"; scaffold_12 StringTie exon 3009744 3010109 1000 . . gene_id "MSTRG.11376"; transcript_id "MSTRG.11376.1"; exon_number "1"; scaffold_120 StringTie exon 188053 188099 1000 - . gene_id "MSTRG.11395"; transcript_id "MSTRG.11395.1"; exon_number "1"; scaffold_120 StringTie exon 188966 189061 1000 - . gene_id "MSTRG.11395"; transcript_id "MSTRG.11395.1"; exon_number "2"; scaffold_120 StringTie exon 189417 189689 1000 - . gene_id "MSTRG.11395"; transcript_id "MSTRG.11395.1"; exon_number "3"; scaffold_120 StringTie exon 205884 206102 1000 . . gene_id "MSTRG.11396"; transcript_id "MSTRG.11396.1"; exon_number "1"; scaffold_120 StringTie exon 411706 412004 1000 . . gene_id "MSTRG.11413"; transcript_id "MSTRG.11413.1"; exon_number "1"; scaffold_120 StringTie exon 417887 418152 1000 . . gene_id "MSTRG.11414"; transcript_id "MSTRG.11414.1"; exon_number "1"; scaffold_120 StringTie exon 607736 608066 1000 . . gene_id "MSTRG.11431"; transcript_id "MSTRG.11431.1"; exon_number "1"; scaffold_120 StringTie exon 749431 749716 1000 . . gene_id "MSTRG.11439"; transcript_id "MSTRG.11439.1"; exon_number "1"; scaffold_120 StringTie exon 849003 849374 1000 . . gene_id "MSTRG.11447"; transcript_id "MSTRG.11447.1"; exon_number "1"; scaffold_120 StringTie exon 920898 921389 1000 . . gene_id "MSTRG.11455"; transcript_id "MSTRG.11455.1"; exon_number "1"; scaffold_120 StringTie exon 955310 955555 1000 . . gene_id "MSTRG.11457"; transcript_id "MSTRG.11457.1"; exon_number "1"; scaffold_120 StringTie exon 1245708 1245758 1000 + . gene_id "MSTRG.11475"; transcript_id "MSTRG.11475.1"; exon_number "1"; scaffold_120 StringTie exon 1246398 1246483 1000 + . gene_id "MSTRG.11475"; transcript_id "MSTRG.11475.1"; exon_number "2"; scaffold_120 StringTie exon 1246799 1246894 1000 + . gene_id "MSTRG.11475"; transcript_id "MSTRG.11475.1"; exon_number "3"; scaffold_120 StringTie exon 1247008 1247097 1000 + . gene_id "MSTRG.11475"; transcript_id "MSTRG.11475.1"; exon_number "4"; scaffold_120 StringTie exon 1249043 1249204 1000 + . gene_id "MSTRG.11475"; transcript_id "MSTRG.11475.1"; exon_number "5"; scaffold_120 StringTie exon 1249374 1249466 1000 + . gene_id "MSTRG.11475"; transcript_id "MSTRG.11475.1"; exon_number "6"; scaffold_120 StringTie exon 1250871 1251030 1000 + . gene_id "MSTRG.11475"; transcript_id "MSTRG.11475.1"; exon_number "7"; scaffold_120 StringTie exon 1423729 1424270 1000 - . gene_id "MSTRG.11497"; transcript_id "MSTRG.11497.1"; exon_number "1"; scaffold_120 StringTie exon 1426027 1426181 1000 - . gene_id "MSTRG.11497"; transcript_id "MSTRG.11497.1"; exon_number "2"; scaffold_120 StringTie exon 1426423 1426596 1000 - . gene_id "MSTRG.11497"; transcript_id "MSTRG.11497.1"; exon_number "3"; scaffold_120 StringTie exon 1446067 1446299 1000 . . gene_id "MSTRG.11500"; transcript_id "MSTRG.11500.1"; exon_number "1"; scaffold_120 StringTie exon 1500394 1500630 1000 . . gene_id "MSTRG.11504"; transcript_id "MSTRG.11504.1"; exon_number "1"; scaffold_120 StringTie exon 1548175 1548235 1000 - . gene_id "MSTRG.11514"; transcript_id "MSTRG.11514.1"; exon_number "1"; scaffold_120 StringTie exon 1548412 1548577 1000 - . gene_id "MSTRG.11514"; transcript_id "MSTRG.11514.1"; exon_number "2"; scaffold_12002 StringTie exon 14381 14884 1000 . . gene_id "MSTRG.11535"; transcript_id "MSTRG.11535.1"; exon_number "1"; scaffold_12007 StringTie exon 15104 15373 1000 . . gene_id "MSTRG.11540"; transcript_id "MSTRG.11540.1"; exon_number "1"; scaffold_1201 StringTie exon 25574 25630 1000 - . gene_id "MSTRG.11547"; transcript_id "MSTRG.11547.1"; exon_number "1"; scaffold_1201 StringTie exon 43344 43465 1000 - . gene_id "MSTRG.11547"; transcript_id "MSTRG.11547.1"; exon_number "2"; scaffold_1201 StringTie exon 44810 44855 1000 - . gene_id "MSTRG.11547"; transcript_id "MSTRG.11547.1"; exon_number "3"; scaffold_1202 StringTie exon 84509 85209 1000 . . gene_id "MSTRG.11572"; transcript_id "MSTRG.11572.1"; exon_number "1"; scaffold_12038 StringTie exon 1181 1531 1000 . . gene_id "MSTRG.11622"; transcript_id "MSTRG.11622.1"; exon_number "1"; scaffold_1204 StringTie exon 135834 136098 1000 . . gene_id "MSTRG.11636"; transcript_id "MSTRG.11636.1"; exon_number "1"; scaffold_12045 StringTie exon 11010 11211 1000 . . gene_id "MSTRG.11654"; transcript_id "MSTRG.11654.1"; exon_number "1"; scaffold_1205 StringTie exon 39689 39756 1000 - . gene_id "MSTRG.11666"; transcript_id "MSTRG.11666.1"; exon_number "1"; scaffold_1205 StringTie exon 40135 40307 1000 - . gene_id "MSTRG.11666"; transcript_id "MSTRG.11666.1"; exon_number "2"; scaffold_1205 StringTie exon 133480 133760 1000 . . gene_id "MSTRG.11676"; transcript_id "MSTRG.11676.1"; exon_number "1"; scaffold_1206 StringTie exon 30646 30879 1000 . . gene_id "MSTRG.11711"; transcript_id "MSTRG.11711.1"; exon_number "1"; scaffold_1206 StringTie exon 219426 219744 1000 . . gene_id "MSTRG.11729"; transcript_id "MSTRG.11729.1"; exon_number "1"; scaffold_1207 StringTie exon 205481 205590 1000 + . gene_id "MSTRG.11760"; transcript_id "MSTRG.11760.3"; exon_number "1"; scaffold_1207 StringTie exon 207326 207455 1000 + . gene_id "MSTRG.11760"; transcript_id "MSTRG.11760.3"; exon_number "2"; scaffold_1207 StringTie exon 210723 210806 1000 + . gene_id "MSTRG.11760"; transcript_id "MSTRG.11760.3"; exon_number "3"; scaffold_1207 StringTie exon 211063 211182 1000 + . gene_id "MSTRG.11760"; transcript_id "MSTRG.11760.3"; exon_number "4"; scaffold_1207 StringTie exon 253824 254034 1000 . . gene_id "MSTRG.11767"; transcript_id "MSTRG.11767.1"; exon_number "1"; scaffold_12075 StringTie exon 3821 4117 1000 . . gene_id "MSTRG.11774"; transcript_id "MSTRG.11774.1"; exon_number "1"; scaffold_12079 StringTie exon 8618 8822 1000 . . gene_id "MSTRG.11780"; transcript_id "MSTRG.11780.1"; exon_number "1"; scaffold_12079 StringTie exon 13114 13318 1000 . . gene_id "MSTRG.11781"; transcript_id "MSTRG.11781.1"; exon_number "1"; scaffold_1208 StringTie exon 223197 223580 1000 . . gene_id "MSTRG.11792"; transcript_id "MSTRG.11792.1"; exon_number "1"; scaffold_1208 StringTie exon 279864 280137 1000 . . gene_id "MSTRG.11798"; transcript_id "MSTRG.11798.1"; exon_number "1"; scaffold_12081 StringTie exon 3657 3880 1000 . . gene_id "MSTRG.11804"; transcript_id "MSTRG.11804.1"; exon_number "1"; scaffold_12084 StringTie exon 10128 10405 1000 . . gene_id "MSTRG.11807"; transcript_id "MSTRG.11807.1"; exon_number "1"; scaffold_12085 StringTie exon 1930 4679 1000 + . gene_id "MSTRG.11809"; transcript_id "MSTRG.11809.1"; exon_number "1"; scaffold_12087 StringTie exon 15557 15759 1000 . . gene_id "MSTRG.11813"; transcript_id "MSTRG.11813.1"; exon_number "1"; scaffold_12089 StringTie exon 12694 13190 1000 . . gene_id "MSTRG.11814"; transcript_id "MSTRG.11814.1"; exon_number "1"; scaffold_1209 StringTie exon 24349 24738 1000 . . gene_id "MSTRG.11818"; transcript_id "MSTRG.11818.1"; exon_number "1"; scaffold_12090 StringTie exon 9720 9928 1000 . . gene_id "MSTRG.11844"; transcript_id "MSTRG.11844.1"; exon_number "1"; scaffold_121 StringTie exon 77117 77324 1000 . . gene_id "MSTRG.11863"; transcript_id "MSTRG.11863.1"; exon_number "1"; scaffold_121 StringTie exon 620337 620693 1000 . . gene_id "MSTRG.11885"; transcript_id "MSTRG.11885.1"; exon_number "1"; scaffold_121 StringTie exon 685588 685939 1000 . . gene_id "MSTRG.11890"; transcript_id "MSTRG.11890.1"; exon_number "1"; scaffold_121 StringTie exon 799982 800123 1000 - . gene_id "MSTRG.11897"; transcript_id "MSTRG.11897.2"; exon_number "1"; scaffold_121 StringTie exon 801029 801180 1000 - . gene_id "MSTRG.11897"; transcript_id "MSTRG.11897.2"; exon_number "2"; scaffold_121 StringTie exon 801464 801575 1000 - . gene_id "MSTRG.11897"; transcript_id "MSTRG.11897.2"; exon_number "3"; scaffold_121 StringTie exon 811778 811843 1000 - . gene_id "MSTRG.11897"; transcript_id "MSTRG.11897.2"; exon_number "4"; scaffold_121 StringTie exon 1094616 1094971 1000 . . gene_id "MSTRG.11916"; transcript_id "MSTRG.11916.1"; exon_number "1"; scaffold_121 StringTie exon 1305106 1305405 1000 . . gene_id "MSTRG.11929"; transcript_id "MSTRG.11929.1"; exon_number "1"; scaffold_121 StringTie exon 1443549 1443759 1000 . . gene_id "MSTRG.11937"; transcript_id "MSTRG.11937.1"; exon_number "1"; scaffold_1210 StringTie exon 99627 100052 1000 . . gene_id "MSTRG.11959"; transcript_id "MSTRG.11959.1"; exon_number "1"; scaffold_1210 StringTie exon 158575 158847 1000 . . gene_id "MSTRG.11963"; transcript_id "MSTRG.11963.1"; exon_number "1"; scaffold_12105 StringTie exon 8535 9217 1000 . . gene_id "MSTRG.11980"; transcript_id "MSTRG.11980.1"; exon_number "1"; scaffold_1211 StringTie exon 44906 45180 1000 . . gene_id "MSTRG.11992"; transcript_id "MSTRG.11992.1"; exon_number "1"; scaffold_1211 StringTie exon 92284 92521 1000 + . gene_id "MSTRG.11999"; transcript_id "MSTRG.11999.1"; exon_number "1"; scaffold_1211 StringTie exon 92635 92847 1000 + . gene_id "MSTRG.11999"; transcript_id "MSTRG.11999.1"; exon_number "2"; scaffold_1211 StringTie exon 93130 93312 1000 + . gene_id "MSTRG.11999"; transcript_id "MSTRG.11999.1"; exon_number "3"; scaffold_1211 StringTie exon 93468 93547 1000 + . gene_id "MSTRG.11999"; transcript_id "MSTRG.11999.1"; exon_number "4"; scaffold_1211 StringTie exon 95707 97059 1000 . . gene_id "MSTRG.12000"; transcript_id "MSTRG.12000.1"; exon_number "1"; scaffold_1211 StringTie exon 267042 267331 1000 . . gene_id "MSTRG.12015"; transcript_id "MSTRG.12015.1"; exon_number "1"; scaffold_12111 StringTie exon 15555 16127 1000 . . gene_id "MSTRG.12019"; transcript_id "MSTRG.12019.1"; exon_number "1"; scaffold_12113 StringTie exon 164 1091 1000 . . gene_id "MSTRG.12021"; transcript_id "MSTRG.12021.1"; exon_number "1"; scaffold_1212 StringTie exon 35719 35910 1000 + . gene_id "MSTRG.12030"; transcript_id "MSTRG.12030.2"; exon_number "1"; scaffold_1212 StringTie exon 37608 37727 1000 + . gene_id "MSTRG.12030"; transcript_id "MSTRG.12030.2"; exon_number "2"; scaffold_1212 StringTie exon 38203 38306 1000 + . gene_id "MSTRG.12030"; transcript_id "MSTRG.12030.2"; exon_number "3"; scaffold_1212 StringTie exon 288991 289246 1000 . . gene_id "MSTRG.12053"; transcript_id "MSTRG.12053.1"; exon_number "1"; scaffold_1213 StringTie exon 78277 78500 1000 . . gene_id "MSTRG.12067"; transcript_id "MSTRG.12067.1"; exon_number "1"; scaffold_1213 StringTie exon 277456 277672 1000 . . gene_id "MSTRG.12075"; transcript_id "MSTRG.12075.1"; exon_number "1"; scaffold_1214 StringTie exon 191396 191825 1000 + . gene_id "MSTRG.12105"; transcript_id "MSTRG.12105.1"; exon_number "1"; scaffold_12141 StringTie exon 15634 16367 1000 . . gene_id "MSTRG.12118"; transcript_id "MSTRG.12118.1"; exon_number "1"; scaffold_12143 StringTie exon 16449 16699 1000 . . gene_id "MSTRG.12123"; transcript_id "MSTRG.12123.1"; exon_number "1"; scaffold_1215 StringTie exon 36733 37241 1000 . . gene_id "MSTRG.12137"; transcript_id "MSTRG.12137.1"; exon_number "1"; scaffold_1215 StringTie exon 134222 134325 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "1"; scaffold_1215 StringTie exon 135587 136118 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "2"; scaffold_1215 StringTie exon 136240 136301 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "3"; scaffold_1215 StringTie exon 136423 136461 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "4"; scaffold_1215 StringTie exon 136569 136647 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "5"; scaffold_1215 StringTie exon 136759 136875 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "6"; scaffold_1215 StringTie exon 139366 139491 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "7"; scaffold_1215 StringTie exon 139573 139737 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "8"; scaffold_1215 StringTie exon 139901 140019 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "9"; scaffold_1215 StringTie exon 140130 140628 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "10"; scaffold_1215 StringTie exon 143047 143140 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "11"; scaffold_1215 StringTie exon 143272 143291 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "12"; scaffold_1215 StringTie exon 143383 143511 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "13"; scaffold_1215 StringTie exon 143741 143863 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "14"; scaffold_1215 StringTie exon 145512 145640 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "15"; scaffold_1215 StringTie exon 145717 145844 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "16"; scaffold_1215 StringTie exon 146079 146193 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "17"; scaffold_1215 StringTie exon 146417 146426 1000 + . gene_id "MSTRG.12153"; transcript_id "MSTRG.12153.2"; exon_number "18"; scaffold_12151 StringTie exon 16421 16773 1000 . . gene_id "MSTRG.12168"; transcript_id "MSTRG.12168.1"; exon_number "1"; scaffold_1216 StringTie exon 274829 275141 1000 . . gene_id "MSTRG.12201"; transcript_id "MSTRG.12201.1"; exon_number "1"; scaffold_1216 StringTie exon 276700 279064 1000 . . gene_id "MSTRG.12203"; transcript_id "MSTRG.12203.1"; exon_number "1"; scaffold_1216 StringTie exon 281828 282228 1000 + . gene_id "MSTRG.12206"; transcript_id "MSTRG.12206.1"; exon_number "1"; scaffold_1217 StringTie exon 114798 115120 1000 . . gene_id "MSTRG.12236"; transcript_id "MSTRG.12236.1"; exon_number "1"; scaffold_1217 StringTie exon 204668 204718 1000 - . gene_id "MSTRG.12245"; transcript_id "MSTRG.12245.1"; exon_number "1"; scaffold_1217 StringTie exon 205038 205105 1000 - . gene_id "MSTRG.12245"; transcript_id "MSTRG.12245.1"; exon_number "2"; scaffold_1217 StringTie exon 205226 205384 1000 - . gene_id "MSTRG.12245"; transcript_id "MSTRG.12245.1"; exon_number "3"; scaffold_1217 StringTie exon 205616 205771 1000 - . gene_id "MSTRG.12245"; transcript_id "MSTRG.12245.1"; exon_number "4"; scaffold_1217 StringTie exon 213496 213578 1000 - . gene_id "MSTRG.12245"; transcript_id "MSTRG.12245.1"; exon_number "5"; scaffold_1217 StringTie exon 213857 213959 1000 - . gene_id "MSTRG.12246"; transcript_id "MSTRG.12246.1"; exon_number "1"; scaffold_1217 StringTie exon 214705 214846 1000 - . gene_id "MSTRG.12246"; transcript_id "MSTRG.12246.1"; exon_number "2"; scaffold_1217 StringTie exon 215125 215234 1000 - . gene_id "MSTRG.12246"; transcript_id "MSTRG.12246.1"; exon_number "3"; scaffold_1217 StringTie exon 216060 216257 1000 - . gene_id "MSTRG.12246"; transcript_id "MSTRG.12246.1"; exon_number "4"; scaffold_1217 StringTie exon 220329 220434 1000 - . gene_id "MSTRG.12246"; transcript_id "MSTRG.12246.1"; exon_number "5"; scaffold_12173 StringTie exon 7748 7986 1000 - . gene_id "MSTRG.12258"; transcript_id "MSTRG.12258.1"; exon_number "1"; scaffold_1218 StringTie exon 43238 43632 1000 . . gene_id "MSTRG.12265"; transcript_id "MSTRG.12265.1"; exon_number "1"; scaffold_1219 StringTie exon 226988 227216 1000 . . gene_id "MSTRG.12322"; transcript_id "MSTRG.12322.1"; exon_number "1"; scaffold_1219 StringTie exon 279263 279538 1000 . . gene_id "MSTRG.12327"; transcript_id "MSTRG.12327.1"; exon_number "1"; scaffold_12194 StringTie exon 17120 17493 1000 . . gene_id "MSTRG.12337"; transcript_id "MSTRG.12337.1"; exon_number "1"; scaffold_122 StringTie exon 39657 39933 1000 . . gene_id "MSTRG.12345"; transcript_id "MSTRG.12345.1"; exon_number "1"; scaffold_122 StringTie exon 685939 686083 1000 + . gene_id "MSTRG.12390"; transcript_id "MSTRG.12390.1"; exon_number "1"; scaffold_122 StringTie exon 686942 687035 1000 + . gene_id "MSTRG.12390"; transcript_id "MSTRG.12390.1"; exon_number "2"; scaffold_122 StringTie exon 687565 687641 1000 + . gene_id "MSTRG.12390"; transcript_id "MSTRG.12390.1"; exon_number "3"; scaffold_122 StringTie exon 687903 687963 1000 + . gene_id "MSTRG.12390"; transcript_id "MSTRG.12390.1"; exon_number "4"; scaffold_122 StringTie exon 943651 944067 1000 . . gene_id "MSTRG.12410"; transcript_id "MSTRG.12410.1"; exon_number "1"; scaffold_122 StringTie exon 1535717 1535749 1000 + . gene_id "MSTRG.12427"; transcript_id "MSTRG.12427.1"; exon_number "1"; scaffold_122 StringTie exon 1537156 1537520 1000 + . gene_id "MSTRG.12427"; transcript_id "MSTRG.12427.1"; exon_number "2"; scaffold_1220 StringTie exon 119214 119537 1000 - . gene_id "MSTRG.12438"; transcript_id "MSTRG.12438.1"; exon_number "1"; scaffold_1220 StringTie exon 120518 120633 1000 - . gene_id "MSTRG.12438"; transcript_id "MSTRG.12438.1"; exon_number "2"; scaffold_12208 StringTie exon 16358 16773 1000 . . gene_id "MSTRG.12478"; transcript_id "MSTRG.12478.1"; exon_number "1"; scaffold_12212 StringTie exon 4173 4465 1000 . . gene_id "MSTRG.12493"; transcript_id "MSTRG.12493.1"; exon_number "1"; scaffold_1222 StringTie exon 40505 40912 1000 . . gene_id "MSTRG.12500"; transcript_id "MSTRG.12500.1"; exon_number "1"; scaffold_1223 StringTie exon 126899 127291 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "1"; scaffold_1223 StringTie exon 127472 127619 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "2"; scaffold_1223 StringTie exon 127803 127949 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "3"; scaffold_1223 StringTie exon 128323 128653 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "4"; scaffold_1223 StringTie exon 130574 130628 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "5"; scaffold_1223 StringTie exon 132176 132193 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "6"; scaffold_1223 StringTie exon 133037 133149 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "7"; scaffold_1223 StringTie exon 133445 133741 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "8"; scaffold_1223 StringTie exon 133922 134131 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "9"; scaffold_1223 StringTie exon 134243 134319 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "10"; scaffold_1223 StringTie exon 134445 134604 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "11"; scaffold_1223 StringTie exon 134827 135058 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "12"; scaffold_1223 StringTie exon 136572 136814 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "13"; scaffold_1223 StringTie exon 136930 137138 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "14"; scaffold_1223 StringTie exon 137415 137519 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "15"; scaffold_1223 StringTie exon 137885 138022 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "16"; scaffold_1223 StringTie exon 141411 141542 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "17"; scaffold_1223 StringTie exon 145029 145191 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "18"; scaffold_1223 StringTie exon 145307 145557 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "19"; scaffold_1223 StringTie exon 145916 146113 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "20"; scaffold_1223 StringTie exon 146285 146566 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "21"; scaffold_1223 StringTie exon 146675 146819 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "22"; scaffold_1223 StringTie exon 146936 147027 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "23"; scaffold_1223 StringTie exon 149131 149166 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "24"; scaffold_1223 StringTie exon 149279 149311 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "25"; scaffold_1223 StringTie exon 150884 150988 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "26"; scaffold_1223 StringTie exon 151191 151389 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "27"; scaffold_1223 StringTie exon 152627 152775 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "28"; scaffold_1223 StringTie exon 153025 153159 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "29"; scaffold_1223 StringTie exon 153425 153517 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "30"; scaffold_1223 StringTie exon 153672 153889 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "31"; scaffold_1223 StringTie exon 158772 159138 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "32"; scaffold_1223 StringTie exon 159846 160027 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "33"; scaffold_1223 StringTie exon 160325 160529 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "34"; scaffold_1223 StringTie exon 160809 160964 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "35"; scaffold_1223 StringTie exon 161204 161468 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "36"; scaffold_1223 StringTie exon 161568 161705 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "37"; scaffold_1223 StringTie exon 161798 161899 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "38"; scaffold_1223 StringTie exon 162039 162174 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "39"; scaffold_1223 StringTie exon 162468 162767 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "40"; scaffold_1223 StringTie exon 162898 163178 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "41"; scaffold_1223 StringTie exon 163471 163611 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "42"; scaffold_1223 StringTie exon 164306 164431 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "43"; scaffold_1223 StringTie exon 164858 165097 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "44"; scaffold_1223 StringTie exon 179067 179180 1000 - . gene_id "MSTRG.12551"; transcript_id "MSTRG.12551.3"; exon_number "45"; scaffold_1223 StringTie exon 215572 215669 1000 + . gene_id "MSTRG.12556"; transcript_id "MSTRG.12556.1"; exon_number "1"; scaffold_1223 StringTie exon 216372 216483 1000 + . gene_id "MSTRG.12556"; transcript_id "MSTRG.12556.1"; exon_number "2"; scaffold_1223 StringTie exon 216852 216960 1000 + . gene_id "MSTRG.12556"; transcript_id "MSTRG.12556.1"; exon_number "3"; scaffold_1223 StringTie exon 217538 217641 1000 + . gene_id "MSTRG.12556"; transcript_id "MSTRG.12556.1"; exon_number "4"; scaffold_12234 StringTie exon 708 1189 1000 . . gene_id "MSTRG.12565"; transcript_id "MSTRG.12565.1"; exon_number "1"; scaffold_1224 StringTie exon 251195 251327 1000 - . gene_id "MSTRG.12595"; transcript_id "MSTRG.12595.1"; exon_number "1"; scaffold_1224 StringTie exon 251768 251888 1000 - . gene_id "MSTRG.12595"; transcript_id "MSTRG.12595.1"; exon_number "2"; scaffold_1224 StringTie exon 252382 252487 1000 - . gene_id "MSTRG.12595"; transcript_id "MSTRG.12595.1"; exon_number "3"; scaffold_1224 StringTie exon 253596 253715 1000 - . gene_id "MSTRG.12595"; transcript_id "MSTRG.12595.1"; exon_number "4"; scaffold_1224 StringTie exon 254757 254912 1000 - . gene_id "MSTRG.12595"; transcript_id "MSTRG.12595.1"; exon_number "5"; scaffold_12248 StringTie exon 1 152 1000 + . gene_id "MSTRG.12612"; transcript_id "MSTRG.12612.1"; exon_number "1"; scaffold_12248 StringTie exon 188 235 1000 + . gene_id "MSTRG.12612"; transcript_id "MSTRG.12612.1"; exon_number "2"; scaffold_1225 StringTie exon 101782 102252 1000 . . gene_id "MSTRG.12619"; transcript_id "MSTRG.12619.1"; exon_number "1"; scaffold_12250 StringTie exon 13028 13339 1000 . . gene_id "MSTRG.12631"; transcript_id "MSTRG.12631.1"; exon_number "1"; scaffold_12253 StringTie exon 13091 13294 1000 . . gene_id "MSTRG.12642"; transcript_id "MSTRG.12642.1"; exon_number "1"; scaffold_12255 StringTie exon 10357 10563 1000 . . gene_id "MSTRG.12646"; transcript_id "MSTRG.12646.1"; exon_number "1"; scaffold_1226 StringTie exon 48295 48418 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "1"; scaffold_1226 StringTie exon 49266 49337 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "2"; scaffold_1226 StringTie exon 49731 49780 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "3"; scaffold_1226 StringTie exon 49879 50031 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "4"; scaffold_1226 StringTie exon 50110 50162 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "5"; scaffold_1226 StringTie exon 50386 50613 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "6"; scaffold_1226 StringTie exon 50866 51016 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "7"; scaffold_1226 StringTie exon 51242 51299 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "8"; scaffold_1226 StringTie exon 51394 52612 1000 + . gene_id "MSTRG.12658"; transcript_id "MSTRG.12658.1"; exon_number "9"; scaffold_12263 StringTie exon 8910 9114 1000 + . gene_id "MSTRG.12674"; transcript_id "MSTRG.12674.1"; exon_number "1"; scaffold_12267 StringTie exon 353 601 1000 . . gene_id "MSTRG.12675"; transcript_id "MSTRG.12675.1"; exon_number "1"; scaffold_1227 StringTie exon 75117 75322 1000 . . gene_id "MSTRG.12693"; transcript_id "MSTRG.12693.1"; exon_number "1"; scaffold_12274 StringTie exon 15577 15707 1000 - . gene_id "MSTRG.12715"; transcript_id "MSTRG.12715.1"; exon_number "1"; scaffold_12274 StringTie exon 16014 16112 1000 - . gene_id "MSTRG.12715"; transcript_id "MSTRG.12715.1"; exon_number "2"; scaffold_12276 StringTie exon 1418 1692 1000 . . gene_id "MSTRG.12716"; transcript_id "MSTRG.12716.1"; exon_number "1"; scaffold_1228 StringTie exon 29511 29800 1000 . . gene_id "MSTRG.12728"; transcript_id "MSTRG.12728.1"; exon_number "1"; scaffold_12293 StringTie exon 2151 2608 1000 . . gene_id "MSTRG.12798"; transcript_id "MSTRG.12798.1"; exon_number "1"; scaffold_123 StringTie exon 1504 1680 1000 - . gene_id "MSTRG.12807"; transcript_id "MSTRG.12807.2"; exon_number "1"; scaffold_123 StringTie exon 1909 2169 1000 - . gene_id "MSTRG.12807"; transcript_id "MSTRG.12807.2"; exon_number "2"; scaffold_123 StringTie exon 2306 2356 1000 - . gene_id "MSTRG.12807"; transcript_id "MSTRG.12807.2"; exon_number "3"; scaffold_123 StringTie exon 2468 2515 1000 - . gene_id "MSTRG.12807"; transcript_id "MSTRG.12807.2"; exon_number "4"; scaffold_123 StringTie exon 2790 2964 1000 - . gene_id "MSTRG.12807"; transcript_id "MSTRG.12807.2"; exon_number "5"; scaffold_123 StringTie exon 3078 3198 1000 - . gene_id "MSTRG.12807"; transcript_id "MSTRG.12807.2"; exon_number "6"; scaffold_123 StringTie exon 3283 3354 1000 - . gene_id "MSTRG.12807"; transcript_id "MSTRG.12807.2"; exon_number "7"; scaffold_123 StringTie exon 6511 6646 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "1"; scaffold_123 StringTie exon 6884 6946 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "2"; scaffold_123 StringTie exon 7046 7111 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "3"; scaffold_123 StringTie exon 7255 7453 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "4"; scaffold_123 StringTie exon 7858 7934 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "5"; scaffold_123 StringTie exon 8070 8148 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "6"; scaffold_123 StringTie exon 8247 8320 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "7"; scaffold_123 StringTie exon 8479 8585 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "8"; scaffold_123 StringTie exon 8900 9078 1000 - . gene_id "MSTRG.12809"; transcript_id "MSTRG.12809.1"; exon_number "9"; scaffold_123 StringTie exon 144853 145100 1000 . . gene_id "MSTRG.12831"; transcript_id "MSTRG.12831.1"; exon_number "1"; scaffold_123 StringTie exon 254701 254970 1000 . . gene_id "MSTRG.12846"; transcript_id "MSTRG.12846.1"; exon_number "1"; scaffold_123 StringTie exon 472272 472518 1000 - . gene_id "MSTRG.12870"; transcript_id "MSTRG.12870.1"; exon_number "1"; scaffold_123 StringTie exon 472685 472755 1000 - . gene_id "MSTRG.12870"; transcript_id "MSTRG.12870.1"; exon_number "2"; scaffold_123 StringTie exon 472862 472990 1000 - . gene_id "MSTRG.12870"; transcript_id "MSTRG.12870.1"; exon_number "3"; scaffold_123 StringTie exon 473588 473607 1000 - . gene_id "MSTRG.12870"; transcript_id "MSTRG.12870.1"; exon_number "4"; scaffold_123 StringTie exon 644528 644836 1000 . . gene_id "MSTRG.12878"; transcript_id "MSTRG.12878.1"; exon_number "1"; scaffold_123 StringTie exon 668039 668164 1000 + . gene_id "MSTRG.12881"; transcript_id "MSTRG.12881.1"; exon_number "1"; scaffold_123 StringTie exon 668381 668472 1000 + . gene_id "MSTRG.12881"; transcript_id "MSTRG.12881.1"; exon_number "2"; scaffold_123 StringTie exon 1174240 1175150 1000 . . gene_id "MSTRG.12917"; transcript_id "MSTRG.12917.1"; exon_number "1"; scaffold_123 StringTie exon 1267055 1267281 1000 . . gene_id "MSTRG.12925"; transcript_id "MSTRG.12925.1"; exon_number "1"; scaffold_123 StringTie exon 1365623 1366730 1000 . . gene_id "MSTRG.12934"; transcript_id "MSTRG.12934.1"; exon_number "1"; scaffold_123 StringTie exon 1433297 1433471 1000 - . gene_id "MSTRG.12946"; transcript_id "MSTRG.12946.1"; exon_number "1"; scaffold_123 StringTie exon 1433616 1433735 1000 - . gene_id "MSTRG.12946"; transcript_id "MSTRG.12946.1"; exon_number "2"; scaffold_123 StringTie exon 1433906 1434141 1000 - . gene_id "MSTRG.12946"; transcript_id "MSTRG.12946.1"; exon_number "3"; scaffold_123 StringTie exon 1436895 1437113 1000 + . gene_id "MSTRG.12948"; transcript_id "MSTRG.12948.1"; exon_number "1"; scaffold_123 StringTie exon 1437386 1437504 1000 + . gene_id "MSTRG.12948"; transcript_id "MSTRG.12948.1"; exon_number "2"; scaffold_123 StringTie exon 1437639 1438036 1000 + . gene_id "MSTRG.12948"; transcript_id "MSTRG.12948.1"; exon_number "3"; scaffold_123 StringTie exon 1460779 1461543 1000 . . gene_id "MSTRG.12952"; transcript_id "MSTRG.12952.1"; exon_number "1"; scaffold_1230 StringTie exon 243094 243345 1000 . . gene_id "MSTRG.12976"; transcript_id "MSTRG.12976.1"; exon_number "1"; scaffold_12306 StringTie exon 7010 7039 1000 - . gene_id "MSTRG.12997"; transcript_id "MSTRG.12997.1"; exon_number "1"; scaffold_12306 StringTie exon 7210 7345 1000 - . gene_id "MSTRG.12997"; transcript_id "MSTRG.12997.1"; exon_number "2"; scaffold_12306 StringTie exon 7515 7560 1000 - . gene_id "MSTRG.12997"; transcript_id "MSTRG.12997.1"; exon_number "3"; scaffold_1232 StringTie exon 35934 36015 1000 + . gene_id "MSTRG.13022"; transcript_id "MSTRG.13022.1"; exon_number "1"; scaffold_1232 StringTie exon 37055 37181 1000 + . gene_id "MSTRG.13022"; transcript_id "MSTRG.13022.1"; exon_number "2"; scaffold_1232 StringTie exon 41054 41506 1000 . . gene_id "MSTRG.13024"; transcript_id "MSTRG.13024.1"; exon_number "1"; scaffold_1232 StringTie exon 84908 84997 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "1"; scaffold_1232 StringTie exon 85132 85257 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "2"; scaffold_1232 StringTie exon 86206 86329 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "3"; scaffold_1232 StringTie exon 86552 86640 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "4"; scaffold_1232 StringTie exon 86745 86873 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "5"; scaffold_1232 StringTie exon 87577 87738 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "6"; scaffold_1232 StringTie exon 87924 88136 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "7"; scaffold_1232 StringTie exon 88324 88536 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "8"; scaffold_1232 StringTie exon 88856 89104 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "9"; scaffold_1232 StringTie exon 89434 89586 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "10"; scaffold_1232 StringTie exon 89739 89905 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "11"; scaffold_1232 StringTie exon 90166 90372 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "12"; scaffold_1232 StringTie exon 90681 90825 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "13"; scaffold_1232 StringTie exon 91063 91275 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "14"; scaffold_1232 StringTie exon 91590 91761 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "15"; scaffold_1232 StringTie exon 92064 92187 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "16"; scaffold_1232 StringTie exon 92501 92638 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "17"; scaffold_1232 StringTie exon 92814 93020 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "18"; scaffold_1232 StringTie exon 93255 93386 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "19"; scaffold_1232 StringTie exon 93518 93626 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "20"; scaffold_1232 StringTie exon 93930 94090 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "21"; scaffold_1232 StringTie exon 94291 94360 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "22"; scaffold_1232 StringTie exon 94582 94703 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "23"; scaffold_1232 StringTie exon 95322 95515 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "24"; scaffold_1232 StringTie exon 95741 95855 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "25"; scaffold_1232 StringTie exon 95977 96150 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "26"; scaffold_1232 StringTie exon 96381 96554 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "27"; scaffold_1232 StringTie exon 96773 96925 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "28"; scaffold_1232 StringTie exon 97135 97253 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "29"; scaffold_1232 StringTie exon 97454 97549 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "30"; scaffold_1232 StringTie exon 98210 98353 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "31"; scaffold_1232 StringTie exon 98783 98881 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "32"; scaffold_1232 StringTie exon 99533 99596 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "33"; scaffold_1232 StringTie exon 99848 99940 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "34"; scaffold_1232 StringTie exon 102669 102714 1000 - . gene_id "MSTRG.13029"; transcript_id "MSTRG.13029.2"; exon_number "35"; scaffold_1232 StringTie exon 130330 130616 1000 . . gene_id "MSTRG.13032"; transcript_id "MSTRG.13032.1"; exon_number "1"; scaffold_1233 StringTie exon 177266 178105 1000 - . gene_id "MSTRG.13060"; transcript_id "MSTRG.13060.1"; exon_number "1"; scaffold_1233 StringTie exon 178315 178364 1000 - . gene_id "MSTRG.13060"; transcript_id "MSTRG.13060.1"; exon_number "2"; scaffold_1233 StringTie exon 178528 182170 1000 - . gene_id "MSTRG.13060"; transcript_id "MSTRG.13060.1"; exon_number "3"; scaffold_1233 StringTie exon 251503 251756 1000 . . gene_id "MSTRG.13063"; transcript_id "MSTRG.13063.1"; exon_number "1"; scaffold_1234 StringTie exon 256730 256964 1000 . . gene_id "MSTRG.13076"; transcript_id "MSTRG.13076.1"; exon_number "1"; scaffold_1235 StringTie exon 30325 30601 1000 . . gene_id "MSTRG.13094"; transcript_id "MSTRG.13094.1"; exon_number "1"; scaffold_1235 StringTie exon 33035 33527 1000 . . gene_id "MSTRG.13097"; transcript_id "MSTRG.13097.1"; exon_number "1"; scaffold_1235 StringTie exon 105392 105616 1000 . . gene_id "MSTRG.13111"; transcript_id "MSTRG.13111.1"; exon_number "1"; scaffold_1235 StringTie exon 146661 146926 1000 . . gene_id "MSTRG.13116"; transcript_id "MSTRG.13116.1"; exon_number "1"; scaffold_1236 StringTie exon 97098 97273 1000 - . gene_id "MSTRG.13140"; transcript_id "MSTRG.13140.1"; exon_number "1"; scaffold_1236 StringTie exon 97552 97590 1000 - . gene_id "MSTRG.13140"; transcript_id "MSTRG.13140.1"; exon_number "2"; scaffold_1236 StringTie exon 123486 123700 1000 - . gene_id "MSTRG.13140"; transcript_id "MSTRG.13140.1"; exon_number "3"; scaffold_1236 StringTie exon 124203 124510 1000 - . gene_id "MSTRG.13140"; transcript_id "MSTRG.13140.1"; exon_number "4"; scaffold_1236 StringTie exon 125987 126334 1000 - . gene_id "MSTRG.13140"; transcript_id "MSTRG.13140.1"; exon_number "5"; scaffold_1236 StringTie exon 127450 127466 1000 - . gene_id "MSTRG.13140"; transcript_id "MSTRG.13140.1"; exon_number "6"; scaffold_1237 StringTie exon 91722 92040 1000 . . gene_id "MSTRG.13166"; transcript_id "MSTRG.13166.1"; exon_number "1"; scaffold_12371 StringTie exon 12918 13267 1000 . . gene_id "MSTRG.13193"; transcript_id "MSTRG.13193.1"; exon_number "1"; scaffold_12375 StringTie exon 7787 8059 1000 . . gene_id "MSTRG.13197"; transcript_id "MSTRG.13197.1"; exon_number "1"; scaffold_12383 StringTie exon 16341 16521 1000 + . gene_id "MSTRG.13229"; transcript_id "MSTRG.13229.1"; exon_number "1"; scaffold_12383 StringTie exon 16803 17129 1000 + . gene_id "MSTRG.13229"; transcript_id "MSTRG.13229.1"; exon_number "2"; scaffold_12398 StringTie exon 7656 7882 1000 . . gene_id "MSTRG.13257"; transcript_id "MSTRG.13257.1"; exon_number "1"; scaffold_124 StringTie exon 160490 160535 1000 - . gene_id "MSTRG.13284"; transcript_id "MSTRG.13284.2"; exon_number "1"; scaffold_124 StringTie exon 162521 162662 1000 - . gene_id "MSTRG.13284"; transcript_id "MSTRG.13284.2"; exon_number "2"; scaffold_124 StringTie exon 163396 163520 1000 - . gene_id "MSTRG.13284"; transcript_id "MSTRG.13284.2"; exon_number "3"; scaffold_124 StringTie exon 164863 165064 1000 - . gene_id "MSTRG.13284"; transcript_id "MSTRG.13284.2"; exon_number "4"; scaffold_124 StringTie exon 174701 174750 1000 - . gene_id "MSTRG.13284"; transcript_id "MSTRG.13284.2"; exon_number "5"; scaffold_124 StringTie exon 275924 276084 1000 + . gene_id "MSTRG.13303"; transcript_id "MSTRG.13303.1"; exon_number "1"; scaffold_124 StringTie exon 276181 276326 1000 + . gene_id "MSTRG.13303"; transcript_id "MSTRG.13303.1"; exon_number "2"; scaffold_124 StringTie exon 277833 277979 1000 + . gene_id "MSTRG.13303"; transcript_id "MSTRG.13303.1"; exon_number "3"; scaffold_124 StringTie exon 278203 278360 1000 + . gene_id "MSTRG.13303"; transcript_id "MSTRG.13303.1"; exon_number "4"; scaffold_124 StringTie exon 278476 278562 1000 + . gene_id "MSTRG.13303"; transcript_id "MSTRG.13303.1"; exon_number "5"; scaffold_124 StringTie exon 348407 348838 1000 + . gene_id "MSTRG.13315"; transcript_id "MSTRG.13315.1"; exon_number "1"; scaffold_124 StringTie exon 349464 349507 1000 + . gene_id "MSTRG.13315"; transcript_id "MSTRG.13315.1"; exon_number "2"; scaffold_124 StringTie exon 349907 349975 1000 + . gene_id "MSTRG.13315"; transcript_id "MSTRG.13315.1"; exon_number "3"; scaffold_124 StringTie exon 583066 583318 1000 . . gene_id "MSTRG.13333"; transcript_id "MSTRG.13333.1"; exon_number "1"; scaffold_124 StringTie exon 663320 663625 1000 . . gene_id "MSTRG.13344"; transcript_id "MSTRG.13344.1"; exon_number "1"; scaffold_124 StringTie exon 857937 858242 1000 . . gene_id "MSTRG.13368"; transcript_id "MSTRG.13368.1"; exon_number "1"; scaffold_124 StringTie exon 1134687 1134943 1000 . . gene_id "MSTRG.13412"; transcript_id "MSTRG.13412.1"; exon_number "1"; scaffold_1240 StringTie exon 191235 191495 1000 . . gene_id "MSTRG.13456"; transcript_id "MSTRG.13456.1"; exon_number "1"; scaffold_12400 StringTie exon 5843 6411 1000 . . gene_id "MSTRG.13464"; transcript_id "MSTRG.13464.1"; exon_number "1"; scaffold_1241 StringTie exon 8826 9047 1000 . . gene_id "MSTRG.13476"; transcript_id "MSTRG.13476.1"; exon_number "1"; scaffold_1241 StringTie exon 77703 77797 1000 - . gene_id "MSTRG.13479"; transcript_id "MSTRG.13479.1"; exon_number "1"; scaffold_1241 StringTie exon 77886 78017 1000 - . gene_id "MSTRG.13479"; transcript_id "MSTRG.13479.1"; exon_number "2"; scaffold_1241 StringTie exon 255819 256054 1000 . . gene_id "MSTRG.13489"; transcript_id "MSTRG.13489.1"; exon_number "1"; scaffold_12411 StringTie exon 2297 2648 1000 - . gene_id "MSTRG.13496"; transcript_id "MSTRG.13496.1"; exon_number "1"; scaffold_12411 StringTie exon 2764 2862 1000 - . gene_id "MSTRG.13496"; transcript_id "MSTRG.13496.1"; exon_number "2"; scaffold_12411 StringTie exon 3337 3390 1000 - . gene_id "MSTRG.13496"; transcript_id "MSTRG.13496.1"; exon_number "3"; scaffold_12411 StringTie exon 7439 7493 1000 - . gene_id "MSTRG.13497"; transcript_id "MSTRG.13497.1"; exon_number "1"; scaffold_12411 StringTie exon 7737 7835 1000 - . gene_id "MSTRG.13497"; transcript_id "MSTRG.13497.1"; exon_number "2"; scaffold_12411 StringTie exon 8210 8263 1000 - . gene_id "MSTRG.13497"; transcript_id "MSTRG.13497.1"; exon_number "3"; scaffold_12411 StringTie exon 8543 8632 1000 - . gene_id "MSTRG.13497"; transcript_id "MSTRG.13497.1"; exon_number "4"; scaffold_12419 StringTie exon 16847 17066 1000 . . gene_id "MSTRG.13503"; transcript_id "MSTRG.13503.1"; exon_number "1"; scaffold_1242 StringTie exon 125415 125903 1000 . . gene_id "MSTRG.13508"; transcript_id "MSTRG.13508.1"; exon_number "1"; scaffold_1242 StringTie exon 163449 165235 1000 - . gene_id "MSTRG.13511"; transcript_id "MSTRG.13511.1"; exon_number "1"; scaffold_1242 StringTie exon 167845 167923 1000 - . gene_id "MSTRG.13511"; transcript_id "MSTRG.13511.1"; exon_number "2"; scaffold_1242 StringTie exon 168212 168376 1000 - . gene_id "MSTRG.13511"; transcript_id "MSTRG.13511.1"; exon_number "3"; scaffold_1242 StringTie exon 170351 170467 1000 - . gene_id "MSTRG.13511"; transcript_id "MSTRG.13511.1"; exon_number "4"; scaffold_1242 StringTie exon 171038 171166 1000 - . gene_id "MSTRG.13511"; transcript_id "MSTRG.13511.1"; exon_number "5"; scaffold_1242 StringTie exon 171584 171788 1000 - . gene_id "MSTRG.13511"; transcript_id "MSTRG.13511.1"; exon_number "6"; scaffold_1242 StringTie exon 205227 205280 1000 + . gene_id "MSTRG.13518"; transcript_id "MSTRG.13518.1"; exon_number "1"; scaffold_1242 StringTie exon 205498 205580 1000 + . gene_id "MSTRG.13518"; transcript_id "MSTRG.13518.1"; exon_number "2"; scaffold_1242 StringTie exon 205740 205833 1000 + . gene_id "MSTRG.13518"; transcript_id "MSTRG.13518.1"; exon_number "3"; scaffold_1242 StringTie exon 207076 207288 1000 + . gene_id "MSTRG.13518"; transcript_id "MSTRG.13518.1"; exon_number "4"; scaffold_1242 StringTie exon 207904 208054 1000 + . gene_id "MSTRG.13518"; transcript_id "MSTRG.13518.1"; exon_number "5"; scaffold_1242 StringTie exon 208266 208404 1000 + . gene_id "MSTRG.13518"; transcript_id "MSTRG.13518.1"; exon_number "6"; scaffold_1243 StringTie exon 65117 65422 1000 . . gene_id "MSTRG.13541"; transcript_id "MSTRG.13541.1"; exon_number "1"; scaffold_1245 StringTie exon 3194 3691 1000 . . gene_id "MSTRG.13599"; transcript_id "MSTRG.13599.1"; exon_number "1"; scaffold_1245 StringTie exon 181399 181800 1000 . . gene_id "MSTRG.13610"; transcript_id "MSTRG.13610.1"; exon_number "1"; scaffold_12460 StringTie exon 10438 10795 1000 . . gene_id "MSTRG.13653"; transcript_id "MSTRG.13653.1"; exon_number "1"; scaffold_12469 StringTie exon 13840 14138 1000 . . gene_id "MSTRG.13662"; transcript_id "MSTRG.13662.1"; exon_number "1"; scaffold_12474 StringTie exon 2161 2363 1000 . . gene_id "MSTRG.13675"; transcript_id "MSTRG.13675.1"; exon_number "1"; scaffold_1248 StringTie exon 212289 213166 1000 . . gene_id "MSTRG.13694"; transcript_id "MSTRG.13694.1"; exon_number "1"; scaffold_1249 StringTie exon 270412 270752 1000 . . gene_id "MSTRG.13733"; transcript_id "MSTRG.13733.1"; exon_number "1"; scaffold_1249 StringTie exon 273620 274016 1000 . . gene_id "MSTRG.13734"; transcript_id "MSTRG.13734.1"; exon_number "1"; scaffold_125 StringTie exon 2432 2705 1000 . . gene_id "MSTRG.13745"; transcript_id "MSTRG.13745.1"; exon_number "1"; scaffold_125 StringTie exon 58241 58948 1000 . . gene_id "MSTRG.13750"; transcript_id "MSTRG.13750.1"; exon_number "1"; scaffold_125 StringTie exon 728170 728406 1000 . . gene_id "MSTRG.13779"; transcript_id "MSTRG.13779.1"; exon_number "1"; scaffold_125 StringTie exon 881895 882207 1000 . . gene_id "MSTRG.13785"; transcript_id "MSTRG.13785.1"; exon_number "1"; scaffold_125 StringTie exon 943035 943707 1000 . . gene_id "MSTRG.13789"; transcript_id "MSTRG.13789.1"; exon_number "1"; scaffold_125 StringTie exon 1137603 1138769 1000 . . gene_id "MSTRG.13804"; transcript_id "MSTRG.13804.1"; exon_number "1"; scaffold_1251 StringTie exon 43621 43835 1000 . . gene_id "MSTRG.13847"; transcript_id "MSTRG.13847.1"; exon_number "1"; scaffold_1252 StringTie exon 156232 156559 1000 . . gene_id "MSTRG.13873"; transcript_id "MSTRG.13873.1"; exon_number "1"; scaffold_1253 StringTie exon 233156 233579 1000 . . gene_id "MSTRG.13901"; transcript_id "MSTRG.13901.1"; exon_number "1"; scaffold_1255 StringTie exon 61960 62201 1000 . . gene_id "MSTRG.13955"; transcript_id "MSTRG.13955.1"; exon_number "1"; scaffold_1255 StringTie exon 74997 75086 1000 + . gene_id "MSTRG.13958"; transcript_id "MSTRG.13958.1"; exon_number "1"; scaffold_1255 StringTie exon 75257 75398 1000 + . gene_id "MSTRG.13958"; transcript_id "MSTRG.13958.1"; exon_number "2"; scaffold_1255 StringTie exon 75696 75998 1000 + . gene_id "MSTRG.13958"; transcript_id "MSTRG.13958.1"; exon_number "3"; scaffold_1255 StringTie exon 131959 132543 1000 + . gene_id "MSTRG.13968"; transcript_id "MSTRG.13968.1"; exon_number "1"; scaffold_1255 StringTie exon 136560 136788 1000 + . gene_id "MSTRG.13968"; transcript_id "MSTRG.13968.1"; exon_number "2"; scaffold_1256 StringTie exon 27792 27993 1000 . . gene_id "MSTRG.13988"; transcript_id "MSTRG.13988.1"; exon_number "1"; scaffold_1256 StringTie exon 28252 28759 1000 . . gene_id "MSTRG.13989"; transcript_id "MSTRG.13989.1"; exon_number "1"; scaffold_1256 StringTie exon 66755 66870 1000 + . gene_id "MSTRG.13997"; transcript_id "MSTRG.13997.1"; exon_number "1"; scaffold_1256 StringTie exon 67644 67780 1000 + . gene_id "MSTRG.13997"; transcript_id "MSTRG.13997.1"; exon_number "2"; scaffold_12579 StringTie exon 13701 14159 1000 - . gene_id "MSTRG.14056"; transcript_id "MSTRG.14056.1"; exon_number "1"; scaffold_12579 StringTie exon 14668 14802 1000 - . gene_id "MSTRG.14056"; transcript_id "MSTRG.14056.1"; exon_number "2"; scaffold_12579 StringTie exon 15209 15426 1000 - . gene_id "MSTRG.14056"; transcript_id "MSTRG.14056.1"; exon_number "3"; scaffold_126 StringTie exon 278853 279091 1000 . . gene_id "MSTRG.14117"; transcript_id "MSTRG.14117.1"; exon_number "1"; scaffold_126 StringTie exon 280928 280988 1000 + . gene_id "MSTRG.14118"; transcript_id "MSTRG.14118.1"; exon_number "1"; scaffold_126 StringTie exon 281074 281171 1000 + . gene_id "MSTRG.14118"; transcript_id "MSTRG.14118.1"; exon_number "2"; scaffold_126 StringTie exon 281765 281853 1000 + . gene_id "MSTRG.14118"; transcript_id "MSTRG.14118.1"; exon_number "3"; scaffold_126 StringTie exon 350412 351272 1000 - . gene_id "MSTRG.14126"; transcript_id "MSTRG.14126.1"; exon_number "1"; scaffold_126 StringTie exon 352993 353037 1000 - . gene_id "MSTRG.14126"; transcript_id "MSTRG.14126.1"; exon_number "2"; scaffold_126 StringTie exon 353644 353815 1000 - . gene_id "MSTRG.14126"; transcript_id "MSTRG.14126.1"; exon_number "3"; scaffold_126 StringTie exon 354011 354077 1000 - . gene_id "MSTRG.14126"; transcript_id "MSTRG.14126.1"; exon_number "4"; scaffold_126 StringTie exon 359102 359729 1000 - . gene_id "MSTRG.14126"; transcript_id "MSTRG.14126.1"; exon_number "5"; scaffold_126 StringTie exon 445903 445954 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.1"; exon_number "1"; scaffold_126 StringTie exon 447839 447928 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.1"; exon_number "2"; scaffold_126 StringTie exon 497693 497758 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.1"; exon_number "3"; scaffold_126 StringTie exon 499330 499479 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.1"; exon_number "4"; scaffold_126 StringTie exon 499818 499913 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.1"; exon_number "5"; scaffold_126 StringTie exon 500281 500409 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.1"; exon_number "6"; scaffold_126 StringTie exon 501211 501367 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.1"; exon_number "7"; scaffold_126 StringTie exon 446377 446702 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.2"; exon_number "1"; scaffold_126 StringTie exon 447839 447928 1000 + . gene_id "MSTRG.14132"; transcript_id "MSTRG.14132.2"; exon_number "2"; scaffold_126 StringTie exon 747691 747936 1000 . . gene_id "MSTRG.14157"; transcript_id "MSTRG.14157.1"; exon_number "1"; scaffold_126 StringTie exon 778647 779236 1000 . . gene_id "MSTRG.14159"; transcript_id "MSTRG.14159.1"; exon_number "1"; scaffold_126 StringTie exon 908922 909153 1000 . . gene_id "MSTRG.14170"; transcript_id "MSTRG.14170.1"; exon_number "1"; scaffold_126 StringTie exon 988479 988754 1000 . . gene_id "MSTRG.14177"; transcript_id "MSTRG.14177.1"; exon_number "1"; scaffold_126 StringTie exon 1008845 1008967 1000 - . gene_id "MSTRG.14179"; transcript_id "MSTRG.14179.1"; exon_number "1"; scaffold_126 StringTie exon 1009209 1009294 1000 - . gene_id "MSTRG.14179"; transcript_id "MSTRG.14179.1"; exon_number "2"; scaffold_126 StringTie exon 1011928 1011993 1000 - . gene_id "MSTRG.14179"; transcript_id "MSTRG.14179.1"; exon_number "3"; scaffold_126 StringTie exon 1012126 1012474 1000 - . gene_id "MSTRG.14179"; transcript_id "MSTRG.14179.1"; exon_number "4"; scaffold_126 StringTie exon 1015551 1015634 1000 - . gene_id "MSTRG.14179"; transcript_id "MSTRG.14179.1"; exon_number "5"; scaffold_126 StringTie exon 1015803 1015910 1000 - . gene_id "MSTRG.14179"; transcript_id "MSTRG.14179.1"; exon_number "6"; scaffold_126 StringTie exon 1016003 1016117 1000 - . gene_id "MSTRG.14179"; transcript_id "MSTRG.14179.1"; exon_number "7"; scaffold_126 StringTie exon 1020267 1020726 1000 - . gene_id "MSTRG.14179"; transcript_id "MSTRG.14179.1"; exon_number "8"; scaffold_126 StringTie exon 1049105 1049204 1000 - . gene_id "MSTRG.14181"; transcript_id "MSTRG.14181.1"; exon_number "1"; scaffold_126 StringTie exon 1049225 1049241 1000 - . gene_id "MSTRG.14181"; transcript_id "MSTRG.14181.1"; exon_number "2"; scaffold_126 StringTie exon 1050416 1050483 1000 - . gene_id "MSTRG.14181"; transcript_id "MSTRG.14181.1"; exon_number "3"; scaffold_126 StringTie exon 1060567 1060750 1000 - . gene_id "MSTRG.14181"; transcript_id "MSTRG.14181.1"; exon_number "4"; scaffold_126 StringTie exon 1239432 1239449 1000 + . gene_id "MSTRG.14190"; transcript_id "MSTRG.14190.1"; exon_number "1"; scaffold_126 StringTie exon 1239811 1239897 1000 + . gene_id "MSTRG.14190"; transcript_id "MSTRG.14190.1"; exon_number "2"; scaffold_126 StringTie exon 1240281 1240504 1000 + . gene_id "MSTRG.14190"; transcript_id "MSTRG.14190.1"; exon_number "3"; scaffold_1260 StringTie exon 274996 276051 1000 . . gene_id "MSTRG.14231"; transcript_id "MSTRG.14231.1"; exon_number "1"; scaffold_12600 StringTie exon 1128 2057 1000 + . gene_id "MSTRG.14232"; transcript_id "MSTRG.14232.1"; exon_number "1"; scaffold_12600 StringTie exon 7002 7258 1000 + . gene_id "MSTRG.14232"; transcript_id "MSTRG.14232.1"; exon_number "2"; scaffold_1261 StringTie exon 82534 82803 1000 - . gene_id "MSTRG.14260"; transcript_id "MSTRG.14260.2"; exon_number "1"; scaffold_1261 StringTie exon 85448 85653 1000 - . gene_id "MSTRG.14260"; transcript_id "MSTRG.14260.2"; exon_number "2"; scaffold_1261 StringTie exon 85742 85820 1000 - . gene_id "MSTRG.14260"; transcript_id "MSTRG.14260.2"; exon_number "3"; scaffold_1261 StringTie exon 86140 86189 1000 - . gene_id "MSTRG.14261"; transcript_id "MSTRG.14261.1"; exon_number "1"; scaffold_1261 StringTie exon 94308 94392 1000 - . gene_id "MSTRG.14261"; transcript_id "MSTRG.14261.1"; exon_number "2"; scaffold_1261 StringTie exon 94758 94936 1000 - . gene_id "MSTRG.14261"; transcript_id "MSTRG.14261.1"; exon_number "3"; scaffold_12611 StringTie exon 14626 14853 1000 . . gene_id "MSTRG.14281"; transcript_id "MSTRG.14281.1"; exon_number "1"; scaffold_1262 StringTie exon 184863 185284 1000 . . gene_id "MSTRG.14307"; transcript_id "MSTRG.14307.1"; exon_number "1"; scaffold_12624 StringTie exon 805 1005 1000 . . gene_id "MSTRG.14316"; transcript_id "MSTRG.14316.1"; exon_number "1"; scaffold_12629 StringTie exon 9050 9247 1000 - . gene_id "MSTRG.14325"; transcript_id "MSTRG.14325.2"; exon_number "1"; scaffold_12629 StringTie exon 12467 12666 1000 - . gene_id "MSTRG.14325"; transcript_id "MSTRG.14325.2"; exon_number "2"; scaffold_12629 StringTie exon 9052 9303 1000 - . gene_id "MSTRG.14325"; transcript_id "MSTRG.14325.7"; exon_number "1"; scaffold_12629 StringTie exon 12467 12550 1000 - . gene_id "MSTRG.14325"; transcript_id "MSTRG.14325.7"; exon_number "2"; scaffold_12629 StringTie exon 9057 9331 1000 - . gene_id "MSTRG.14325"; transcript_id "MSTRG.14325.9"; exon_number "1"; scaffold_12629 StringTie exon 12525 12595 1000 - . gene_id "MSTRG.14325"; transcript_id "MSTRG.14325.9"; exon_number "2"; scaffold_1263 StringTie exon 104172 104376 1000 . . gene_id "MSTRG.14335"; transcript_id "MSTRG.14335.1"; exon_number "1"; scaffold_12630 StringTie exon 14592 14935 1000 . . gene_id "MSTRG.14351"; transcript_id "MSTRG.14351.1"; exon_number "1"; scaffold_12647 StringTie exon 1157 1764 1000 . . gene_id "MSTRG.14387"; transcript_id "MSTRG.14387.1"; exon_number "1"; scaffold_12656 StringTie exon 13698 13745 1000 - . gene_id "MSTRG.14420"; transcript_id "MSTRG.14420.1"; exon_number "1"; scaffold_12656 StringTie exon 14148 14274 1000 - . gene_id "MSTRG.14420"; transcript_id "MSTRG.14420.1"; exon_number "2"; scaffold_12656 StringTie exon 14392 14513 1000 - . gene_id "MSTRG.14420"; transcript_id "MSTRG.14420.1"; exon_number "3"; scaffold_12656 StringTie exon 14621 14718 1000 - . gene_id "MSTRG.14420"; transcript_id "MSTRG.14420.1"; exon_number "4"; scaffold_1266 StringTie exon 84231 84508 1000 . . gene_id "MSTRG.14430"; transcript_id "MSTRG.14430.1"; exon_number "1"; scaffold_12662 StringTie exon 9819 10174 1000 . . gene_id "MSTRG.14440"; transcript_id "MSTRG.14440.1"; exon_number "1"; scaffold_1267 StringTie exon 129090 129393 1000 . . gene_id "MSTRG.14460"; transcript_id "MSTRG.14460.1"; exon_number "1"; scaffold_1268 StringTie exon 40239 40480 1000 . . gene_id "MSTRG.14497"; transcript_id "MSTRG.14497.1"; exon_number "1"; scaffold_1268 StringTie exon 168304 169718 1000 . . gene_id "MSTRG.14501"; transcript_id "MSTRG.14501.1"; exon_number "1"; scaffold_1268 StringTie exon 181636 181845 1000 . . gene_id "MSTRG.14503"; transcript_id "MSTRG.14503.1"; exon_number "1"; scaffold_12687 StringTie exon 9521 9601 1000 - . gene_id "MSTRG.14527"; transcript_id "MSTRG.14527.1"; exon_number "1"; scaffold_12687 StringTie exon 11846 12028 1000 - . gene_id "MSTRG.14527"; transcript_id "MSTRG.14527.1"; exon_number "2"; scaffold_12687 StringTie exon 12369 12414 1000 - . gene_id "MSTRG.14527"; transcript_id "MSTRG.14527.1"; exon_number "3"; scaffold_1269 StringTie exon 91858 92078 1000 . . gene_id "MSTRG.14531"; transcript_id "MSTRG.14531.1"; exon_number "1"; scaffold_1269 StringTie exon 97719 98070 1000 . . gene_id "MSTRG.14532"; transcript_id "MSTRG.14532.1"; exon_number "1"; scaffold_127 StringTie exon 120334 120679 1000 . . gene_id "MSTRG.14558"; transcript_id "MSTRG.14558.1"; exon_number "1"; scaffold_127 StringTie exon 850726 850973 1000 . . gene_id "MSTRG.14610"; transcript_id "MSTRG.14610.1"; exon_number "1"; scaffold_1271 StringTie exon 224738 225101 1000 - . gene_id "MSTRG.14698"; transcript_id "MSTRG.14698.1"; exon_number "1"; scaffold_1271 StringTie exon 263699 264042 1000 . . gene_id "MSTRG.14701"; transcript_id "MSTRG.14701.1"; exon_number "1"; scaffold_1272 StringTie exon 217534 217877 1000 . . gene_id "MSTRG.14729"; transcript_id "MSTRG.14729.1"; exon_number "1"; scaffold_12729 StringTie exon 12065 13352 1000 . . gene_id "MSTRG.14742"; transcript_id "MSTRG.14742.1"; exon_number "1"; scaffold_1273 StringTie exon 14839 15163 1000 . . gene_id "MSTRG.14745"; transcript_id "MSTRG.14745.1"; exon_number "1"; scaffold_1273 StringTie exon 58755 59053 1000 . . gene_id "MSTRG.14749"; transcript_id "MSTRG.14749.1"; exon_number "1"; scaffold_1274 StringTie exon 68579 69125 1000 . . gene_id "MSTRG.14776"; transcript_id "MSTRG.14776.1"; exon_number "1"; scaffold_12750 StringTie exon 12307 12812 1000 . . gene_id "MSTRG.14828"; transcript_id "MSTRG.14828.1"; exon_number "1"; scaffold_12752 StringTie exon 10222 10426 1000 . . gene_id "MSTRG.14831"; transcript_id "MSTRG.14831.1"; exon_number "1"; scaffold_12759 StringTie exon 525 832 1000 . . gene_id "MSTRG.14836"; transcript_id "MSTRG.14836.1"; exon_number "1"; scaffold_1276 StringTie exon 193552 193654 1000 - . gene_id "MSTRG.14849"; transcript_id "MSTRG.14849.1"; exon_number "1"; scaffold_1276 StringTie exon 193816 193990 1000 - . gene_id "MSTRG.14849"; transcript_id "MSTRG.14849.1"; exon_number "2"; scaffold_1276 StringTie exon 195145 195296 1000 - . gene_id "MSTRG.14849"; transcript_id "MSTRG.14849.1"; exon_number "3"; scaffold_1277 StringTie exon 60694 60928 1000 . . gene_id "MSTRG.14870"; transcript_id "MSTRG.14870.1"; exon_number "1"; scaffold_12773 StringTie exon 907 1320 1000 . . gene_id "MSTRG.14891"; transcript_id "MSTRG.14891.1"; exon_number "1"; scaffold_1278 StringTie exon 3452 4882 1000 . . gene_id "MSTRG.14898"; transcript_id "MSTRG.14898.1"; exon_number "1"; scaffold_1279 StringTie exon 166347 166547 1000 . . gene_id "MSTRG.14943"; transcript_id "MSTRG.14943.1"; exon_number "1"; scaffold_1279 StringTie exon 170286 170758 1000 . . gene_id "MSTRG.14945"; transcript_id "MSTRG.14945.1"; exon_number "1"; scaffold_12795 StringTie exon 151 553 1000 . . gene_id "MSTRG.14956"; transcript_id "MSTRG.14956.1"; exon_number "1"; scaffold_128 StringTie exon 34359 35071 1000 + . gene_id "MSTRG.14961"; transcript_id "MSTRG.14961.1"; exon_number "1"; scaffold_128 StringTie exon 40566 40796 1000 . . gene_id "MSTRG.14962"; transcript_id "MSTRG.14962.1"; exon_number "1"; scaffold_128 StringTie exon 1104020 1104278 1000 . . gene_id "MSTRG.15013"; transcript_id "MSTRG.15013.1"; exon_number "1"; scaffold_128 StringTie exon 1329689 1329955 1000 . . gene_id "MSTRG.15024"; transcript_id "MSTRG.15024.1"; exon_number "1"; scaffold_128 StringTie exon 1380839 1381223 1000 . . gene_id "MSTRG.15026"; transcript_id "MSTRG.15026.1"; exon_number "1"; scaffold_128 StringTie exon 1382366 1382721 1000 . . gene_id "MSTRG.15028"; transcript_id "MSTRG.15028.1"; exon_number "1"; scaffold_128 StringTie exon 1461428 1461689 1000 . . gene_id "MSTRG.15036"; transcript_id "MSTRG.15036.1"; exon_number "1"; scaffold_1281 StringTie exon 402 610 1000 . . gene_id "MSTRG.15076"; transcript_id "MSTRG.15076.1"; exon_number "1"; scaffold_1281 StringTie exon 52241 52437 1000 + . gene_id "MSTRG.15084"; transcript_id "MSTRG.15084.1"; exon_number "1"; scaffold_1281 StringTie exon 52975 53019 1000 + . gene_id "MSTRG.15084"; transcript_id "MSTRG.15084.1"; exon_number "2"; scaffold_1281 StringTie exon 223053 223160 1000 + . gene_id "MSTRG.15097"; transcript_id "MSTRG.15097.1"; exon_number "1"; scaffold_1281 StringTie exon 224280 224369 1000 + . gene_id "MSTRG.15097"; transcript_id "MSTRG.15097.1"; exon_number "2"; scaffold_1281 StringTie exon 228448 228571 1000 + . gene_id "MSTRG.15097"; transcript_id "MSTRG.15097.1"; exon_number "3"; scaffold_1281 StringTie exon 230457 230582 1000 + . gene_id "MSTRG.15097"; transcript_id "MSTRG.15097.1"; exon_number "4"; scaffold_1281 StringTie exon 230672 230795 1000 + . gene_id "MSTRG.15097"; transcript_id "MSTRG.15097.1"; exon_number "5"; scaffold_1281 StringTie exon 231034 231097 1000 + . gene_id "MSTRG.15097"; transcript_id "MSTRG.15097.1"; exon_number "6"; scaffold_12815 StringTie exon 2787 3791 1000 . . gene_id "MSTRG.15111"; transcript_id "MSTRG.15111.1"; exon_number "1"; scaffold_1282 StringTie exon 176504 179064 1000 + . gene_id "MSTRG.15119"; transcript_id "MSTRG.15119.1"; exon_number "1"; scaffold_12835 StringTie exon 2520 2755 1000 . . gene_id "MSTRG.15152"; transcript_id "MSTRG.15152.1"; exon_number "1"; scaffold_12838 StringTie exon 15008 15355 1000 . . gene_id "MSTRG.15160"; transcript_id "MSTRG.15160.1"; exon_number "1"; scaffold_1284 StringTie exon 3356 3555 1000 + . gene_id "MSTRG.15161"; transcript_id "MSTRG.15161.1"; exon_number "1"; scaffold_1284 StringTie exon 4022 4168 1000 + . gene_id "MSTRG.15161"; transcript_id "MSTRG.15161.1"; exon_number "2"; scaffold_1284 StringTie exon 4329 4472 1000 + . gene_id "MSTRG.15161"; transcript_id "MSTRG.15161.1"; exon_number "3"; scaffold_1284 StringTie exon 4668 4747 1000 + . gene_id "MSTRG.15161"; transcript_id "MSTRG.15161.1"; exon_number "4"; scaffold_1284 StringTie exon 4952 5084 1000 + . gene_id "MSTRG.15161"; transcript_id "MSTRG.15161.1"; exon_number "5"; scaffold_1284 StringTie exon 5296 5439 1000 + . gene_id "MSTRG.15161"; transcript_id "MSTRG.15161.1"; exon_number "6"; scaffold_1284 StringTie exon 5790 5859 1000 + . gene_id "MSTRG.15161"; transcript_id "MSTRG.15161.1"; exon_number "7"; scaffold_1284 StringTie exon 11396 11471 1000 + . gene_id "MSTRG.15161"; transcript_id "MSTRG.15161.1"; exon_number "8"; scaffold_1284 StringTie exon 93675 93819 1000 - . gene_id "MSTRG.15170"; transcript_id "MSTRG.15170.1"; exon_number "1"; scaffold_1284 StringTie exon 94043 94187 1000 - . gene_id "MSTRG.15170"; transcript_id "MSTRG.15170.1"; exon_number "2"; scaffold_1284 StringTie exon 94335 94479 1000 - . gene_id "MSTRG.15170"; transcript_id "MSTRG.15170.1"; exon_number "3"; scaffold_1284 StringTie exon 94667 94771 1000 - . gene_id "MSTRG.15170"; transcript_id "MSTRG.15170.1"; exon_number "4"; scaffold_1284 StringTie exon 94956 95083 1000 - . gene_id "MSTRG.15170"; transcript_id "MSTRG.15170.1"; exon_number "5"; scaffold_1284 StringTie exon 112123 112345 1000 . . gene_id "MSTRG.15174"; transcript_id "MSTRG.15174.1"; exon_number "1"; scaffold_12844 StringTie exon 16067 16333 1000 . . gene_id "MSTRG.15188"; transcript_id "MSTRG.15188.1"; exon_number "1"; scaffold_1285 StringTie exon 57497 57762 1000 . . gene_id "MSTRG.15198"; transcript_id "MSTRG.15198.1"; exon_number "1"; scaffold_12852 StringTie exon 6408 6725 1000 . . gene_id "MSTRG.15221"; transcript_id "MSTRG.15221.1"; exon_number "1"; scaffold_12866 StringTie exon 1277 1743 1000 - . gene_id "MSTRG.15254"; transcript_id "MSTRG.15254.1"; exon_number "1"; scaffold_12866 StringTie exon 1859 1924 1000 - . gene_id "MSTRG.15254"; transcript_id "MSTRG.15254.1"; exon_number "2"; scaffold_12867 StringTie exon 6594 6907 1000 . . gene_id "MSTRG.15256"; transcript_id "MSTRG.15256.1"; exon_number "1"; scaffold_1287 StringTie exon 4820 5674 1000 . . gene_id "MSTRG.15261"; transcript_id "MSTRG.15261.1"; exon_number "1"; scaffold_1287 StringTie exon 179567 179650 1000 - . gene_id "MSTRG.15275"; transcript_id "MSTRG.15275.2"; exon_number "1"; scaffold_1287 StringTie exon 185347 185431 1000 - . gene_id "MSTRG.15275"; transcript_id "MSTRG.15275.2"; exon_number "2"; scaffold_1287 StringTie exon 185888 185952 1000 - . gene_id "MSTRG.15275"; transcript_id "MSTRG.15275.2"; exon_number "3"; scaffold_12873 StringTie exon 3715 4044 1000 - . gene_id "MSTRG.15290"; transcript_id "MSTRG.15290.2"; exon_number "1"; scaffold_12873 StringTie exon 4410 4456 1000 - . gene_id "MSTRG.15290"; transcript_id "MSTRG.15290.2"; exon_number "2"; scaffold_12873 StringTie exon 4889 5062 1000 - . gene_id "MSTRG.15290"; transcript_id "MSTRG.15290.2"; exon_number "3"; scaffold_12873 StringTie exon 15469 15637 1000 - . gene_id "MSTRG.15290"; transcript_id "MSTRG.15290.2"; exon_number "4"; scaffold_12875 StringTie exon 299 368 1000 + . gene_id "MSTRG.15296"; transcript_id "MSTRG.15296.1"; exon_number "1"; scaffold_12875 StringTie exon 8746 8832 1000 + . gene_id "MSTRG.15296"; transcript_id "MSTRG.15296.1"; exon_number "2"; scaffold_12875 StringTie exon 11413 11515 1000 + . gene_id "MSTRG.15296"; transcript_id "MSTRG.15296.1"; exon_number "3"; scaffold_12875 StringTie exon 11638 11779 1000 + . gene_id "MSTRG.15296"; transcript_id "MSTRG.15296.1"; exon_number "4"; scaffold_12875 StringTie exon 12112 12179 1000 + . gene_id "MSTRG.15296"; transcript_id "MSTRG.15296.1"; exon_number "5"; scaffold_12877 StringTie exon 1 251 1000 . . gene_id "MSTRG.15297"; transcript_id "MSTRG.15297.1"; exon_number "1"; scaffold_1288 StringTie exon 97340 97413 1000 + . gene_id "MSTRG.15306"; transcript_id "MSTRG.15306.1"; exon_number "1"; scaffold_1288 StringTie exon 98237 98346 1000 + . gene_id "MSTRG.15306"; transcript_id "MSTRG.15306.1"; exon_number "2"; scaffold_1288 StringTie exon 108891 108968 1000 + . gene_id "MSTRG.15306"; transcript_id "MSTRG.15306.1"; exon_number "3"; scaffold_12887 StringTie exon 9709 10192 1000 . . gene_id "MSTRG.15323"; transcript_id "MSTRG.15323.1"; exon_number "1"; scaffold_1289 StringTie exon 95355 95831 1000 . . gene_id "MSTRG.15332"; transcript_id "MSTRG.15332.1"; exon_number "1"; scaffold_12891 StringTie exon 6136 6626 1000 . . gene_id "MSTRG.15347"; transcript_id "MSTRG.15347.1"; exon_number "1"; scaffold_12897 StringTie exon 3907 4064 1000 - . gene_id "MSTRG.15358"; transcript_id "MSTRG.15358.1"; exon_number "1"; scaffold_12897 StringTie exon 4145 4234 1000 - . gene_id "MSTRG.15358"; transcript_id "MSTRG.15358.1"; exon_number "2"; scaffold_129 StringTie exon 219058 219270 1000 . . gene_id "MSTRG.15378"; transcript_id "MSTRG.15378.1"; exon_number "1"; scaffold_129 StringTie exon 513164 513813 1000 . . gene_id "MSTRG.15401"; transcript_id "MSTRG.15401.1"; exon_number "1"; scaffold_129 StringTie exon 720316 720663 1000 . . gene_id "MSTRG.15417"; transcript_id "MSTRG.15417.1"; exon_number "1"; scaffold_129 StringTie exon 724944 725303 1000 . . gene_id "MSTRG.15419"; transcript_id "MSTRG.15419.1"; exon_number "1"; scaffold_129 StringTie exon 748316 749118 1000 - . gene_id "MSTRG.15423"; transcript_id "MSTRG.15423.1"; exon_number "1"; scaffold_129 StringTie exon 750246 750422 1000 - . gene_id "MSTRG.15423"; transcript_id "MSTRG.15423.1"; exon_number "2"; scaffold_129 StringTie exon 750557 750614 1000 - . gene_id "MSTRG.15423"; transcript_id "MSTRG.15423.1"; exon_number "3"; scaffold_129 StringTie exon 750776 751059 1000 - . gene_id "MSTRG.15423"; transcript_id "MSTRG.15423.1"; exon_number "4"; scaffold_129 StringTie exon 751214 751293 1000 - . gene_id "MSTRG.15423"; transcript_id "MSTRG.15423.1"; exon_number "5"; scaffold_129 StringTie exon 798100 798346 1000 + . gene_id "MSTRG.15430"; transcript_id "MSTRG.15430.1"; exon_number "1"; scaffold_129 StringTie exon 798578 798646 1000 + . gene_id "MSTRG.15430"; transcript_id "MSTRG.15430.1"; exon_number "2"; scaffold_129 StringTie exon 798891 799006 1000 + . gene_id "MSTRG.15430"; transcript_id "MSTRG.15430.1"; exon_number "3"; scaffold_129 StringTie exon 799342 800130 1000 + . gene_id "MSTRG.15430"; transcript_id "MSTRG.15430.1"; exon_number "4"; scaffold_129 StringTie exon 932905 933740 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "1"; scaffold_129 StringTie exon 938067 938327 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "2"; scaffold_129 StringTie exon 938474 938521 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "3"; scaffold_129 StringTie exon 938737 938895 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "4"; scaffold_129 StringTie exon 940642 940725 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "5"; scaffold_129 StringTie exon 942072 942149 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "6"; scaffold_129 StringTie exon 943086 943142 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "7"; scaffold_129 StringTie exon 946283 946360 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "8"; scaffold_129 StringTie exon 946495 946604 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "9"; scaffold_129 StringTie exon 947005 947144 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "10"; scaffold_129 StringTie exon 947477 947561 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "11"; scaffold_129 StringTie exon 947710 947854 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "12"; scaffold_129 StringTie exon 947952 948043 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "13"; scaffold_129 StringTie exon 948295 948418 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "14"; scaffold_129 StringTie exon 948548 948744 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "15"; scaffold_129 StringTie exon 950073 950249 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "16"; scaffold_129 StringTie exon 950671 950855 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "17"; scaffold_129 StringTie exon 950968 951277 1000 + . gene_id "MSTRG.15444"; transcript_id "MSTRG.15444.1"; exon_number "18"; scaffold_129 StringTie exon 1070194 1070361 1000 + . gene_id "MSTRG.15453"; transcript_id "MSTRG.15453.1"; exon_number "1"; scaffold_129 StringTie exon 1070573 1070702 1000 + . gene_id "MSTRG.15453"; transcript_id "MSTRG.15453.1"; exon_number "2"; scaffold_129 StringTie exon 1073876 1073969 1000 + . gene_id "MSTRG.15453"; transcript_id "MSTRG.15453.1"; exon_number "3"; scaffold_129 StringTie exon 1074082 1074165 1000 + . gene_id "MSTRG.15453"; transcript_id "MSTRG.15453.1"; exon_number "4"; scaffold_129 StringTie exon 1074834 1074848 1000 + . gene_id "MSTRG.15453"; transcript_id "MSTRG.15453.1"; exon_number "5"; scaffold_129 StringTie exon 1081382 1081534 1000 + . gene_id "MSTRG.15455"; transcript_id "MSTRG.15455.1"; exon_number "1"; scaffold_129 StringTie exon 1081655 1081726 1000 + . gene_id "MSTRG.15455"; transcript_id "MSTRG.15455.1"; exon_number "2"; scaffold_129 StringTie exon 1120003 1120034 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "1"; scaffold_129 StringTie exon 1121484 1121681 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "2"; scaffold_129 StringTie exon 1121800 1121912 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "3"; scaffold_129 StringTie exon 1122069 1122180 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "4"; scaffold_129 StringTie exon 1124477 1124602 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "5"; scaffold_129 StringTie exon 1124807 1124913 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "6"; scaffold_129 StringTie exon 1125072 1125186 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "7"; scaffold_129 StringTie exon 1125401 1125455 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "8"; scaffold_129 StringTie exon 1125538 1125619 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "9"; scaffold_129 StringTie exon 1126355 1126723 1000 + . gene_id "MSTRG.15457"; transcript_id "MSTRG.15457.2"; exon_number "10"; scaffold_129 StringTie exon 1364748 1365398 1000 . . gene_id "MSTRG.15480"; transcript_id "MSTRG.15480.1"; exon_number "1"; scaffold_12906 StringTie exon 15941 16275 1000 . . gene_id "MSTRG.15527"; transcript_id "MSTRG.15527.1"; exon_number "1"; scaffold_12917 StringTie exon 1233 1470 1000 . . gene_id "MSTRG.15574"; transcript_id "MSTRG.15574.1"; exon_number "1"; scaffold_12925 StringTie exon 15079 15607 1000 . . gene_id "MSTRG.15604"; transcript_id "MSTRG.15604.1"; exon_number "1"; scaffold_12926 StringTie exon 92 181 1000 + . gene_id "MSTRG.15606"; transcript_id "MSTRG.15606.1"; exon_number "1"; scaffold_12926 StringTie exon 210 399 1000 + . gene_id "MSTRG.15606"; transcript_id "MSTRG.15606.1"; exon_number "2"; scaffold_1293 StringTie exon 54271 54359 1000 + . gene_id "MSTRG.15619"; transcript_id "MSTRG.15619.1"; exon_number "1"; scaffold_1293 StringTie exon 55108 55279 1000 + . gene_id "MSTRG.15619"; transcript_id "MSTRG.15619.1"; exon_number "2"; scaffold_1293 StringTie exon 82602 82805 1000 . . gene_id "MSTRG.15626"; transcript_id "MSTRG.15626.1"; exon_number "1"; scaffold_12936 StringTie exon 13861 14159 1000 . . gene_id "MSTRG.15648"; transcript_id "MSTRG.15648.1"; exon_number "1"; scaffold_1294 StringTie exon 54988 56788 1000 . . gene_id "MSTRG.15650"; transcript_id "MSTRG.15650.1"; exon_number "1"; scaffold_1294 StringTie exon 162728 162757 1000 + . gene_id "MSTRG.15661"; transcript_id "MSTRG.15661.1"; exon_number "1"; scaffold_1294 StringTie exon 162977 163100 1000 + . gene_id "MSTRG.15661"; transcript_id "MSTRG.15661.1"; exon_number "2"; scaffold_1294 StringTie exon 163201 163346 1000 + . gene_id "MSTRG.15661"; transcript_id "MSTRG.15661.1"; exon_number "3"; scaffold_1294 StringTie exon 163471 163509 1000 + . gene_id "MSTRG.15661"; transcript_id "MSTRG.15661.1"; exon_number "4"; scaffold_1294 StringTie exon 187031 187273 1000 . . gene_id "MSTRG.15665"; transcript_id "MSTRG.15665.1"; exon_number "1"; scaffold_12949 StringTie exon 15570 15837 1000 . . gene_id "MSTRG.15689"; transcript_id "MSTRG.15689.1"; exon_number "1"; scaffold_1295 StringTie exon 126573 126849 1000 . . gene_id "MSTRG.15698"; transcript_id "MSTRG.15698.1"; exon_number "1"; scaffold_12950 StringTie exon 10158 10775 1000 . . gene_id "MSTRG.15707"; transcript_id "MSTRG.15707.1"; exon_number "1"; scaffold_1296 StringTie exon 161596 161828 1000 . . gene_id "MSTRG.15727"; transcript_id "MSTRG.15727.1"; exon_number "1"; scaffold_1296 StringTie exon 256062 256321 1000 . . gene_id "MSTRG.15732"; transcript_id "MSTRG.15732.1"; exon_number "1"; scaffold_1297 StringTie exon 43264 43579 1000 . . gene_id "MSTRG.15749"; transcript_id "MSTRG.15749.1"; exon_number "1"; scaffold_1297 StringTie exon 50344 50605 1000 . . gene_id "MSTRG.15751"; transcript_id "MSTRG.15751.1"; exon_number "1"; scaffold_1297 StringTie exon 216284 216523 1000 . . gene_id "MSTRG.15756"; transcript_id "MSTRG.15756.1"; exon_number "1"; scaffold_1297 StringTie exon 258014 258400 1000 . . gene_id "MSTRG.15759"; transcript_id "MSTRG.15759.1"; exon_number "1"; scaffold_1298 StringTie exon 20031 20292 1000 . . gene_id "MSTRG.15768"; transcript_id "MSTRG.15768.1"; exon_number "1"; scaffold_1298 StringTie exon 44651 44718 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "1"; scaffold_1298 StringTie exon 55798 55903 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "2"; scaffold_1298 StringTie exon 86527 86678 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "3"; scaffold_1298 StringTie exon 107344 107377 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "4"; scaffold_1298 StringTie exon 110796 110818 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "5"; scaffold_1298 StringTie exon 112231 112257 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "6"; scaffold_1298 StringTie exon 112573 112727 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "7"; scaffold_1298 StringTie exon 113984 114014 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "8"; scaffold_1298 StringTie exon 114666 116387 1000 + . gene_id "MSTRG.15770"; transcript_id "MSTRG.15770.1"; exon_number "9"; scaffold_1298 StringTie exon 160167 160461 1000 . . gene_id "MSTRG.15774"; transcript_id "MSTRG.15774.1"; exon_number "1"; scaffold_12984 StringTie exon 368 583 1000 . . gene_id "MSTRG.15788"; transcript_id "MSTRG.15788.1"; exon_number "1"; scaffold_12984 StringTie exon 14343 14548 1000 . . gene_id "MSTRG.15791"; transcript_id "MSTRG.15791.1"; exon_number "1"; scaffold_13 StringTie exon 24190 24228 1000 - . gene_id "MSTRG.15819"; transcript_id "MSTRG.15819.1"; exon_number "1"; scaffold_13 StringTie exon 24549 24743 1000 - . gene_id "MSTRG.15819"; transcript_id "MSTRG.15819.1"; exon_number "2"; scaffold_13 StringTie exon 25924 26012 1000 - . gene_id "MSTRG.15819"; transcript_id "MSTRG.15819.1"; exon_number "3"; scaffold_13 StringTie exon 449978 450235 1000 . . gene_id "MSTRG.15852"; transcript_id "MSTRG.15852.1"; exon_number "1"; scaffold_13 StringTie exon 549526 549765 1000 . . gene_id "MSTRG.15862"; transcript_id "MSTRG.15862.1"; exon_number "1"; scaffold_13 StringTie exon 683600 683768 1000 + . gene_id "MSTRG.15873"; transcript_id "MSTRG.15873.3"; exon_number "1"; scaffold_13 StringTie exon 684004 684093 1000 + . gene_id "MSTRG.15873"; transcript_id "MSTRG.15873.3"; exon_number "2"; scaffold_13 StringTie exon 684214 684272 1000 + . gene_id "MSTRG.15873"; transcript_id "MSTRG.15873.3"; exon_number "3"; scaffold_13 StringTie exon 684377 684471 1000 + . gene_id "MSTRG.15873"; transcript_id "MSTRG.15873.3"; exon_number "4"; scaffold_13 StringTie exon 691964 692701 1000 + . gene_id "MSTRG.15873"; transcript_id "MSTRG.15873.3"; exon_number "5"; scaffold_130 StringTie exon 51477 51778 1000 . . gene_id "MSTRG.15879"; transcript_id "MSTRG.15879.1"; exon_number "1"; scaffold_130 StringTie exon 187623 187677 1000 + . gene_id "MSTRG.15886"; transcript_id "MSTRG.15886.1"; exon_number "1"; scaffold_130 StringTie exon 187926 188062 1000 + . gene_id "MSTRG.15886"; transcript_id "MSTRG.15886.1"; exon_number "2"; scaffold_130 StringTie exon 190453 190508 1000 + . gene_id "MSTRG.15886"; transcript_id "MSTRG.15886.1"; exon_number "3"; scaffold_130 StringTie exon 190863 191853 1000 + . gene_id "MSTRG.15886"; transcript_id "MSTRG.15886.1"; exon_number "4"; scaffold_130 StringTie exon 836639 836933 1000 . . gene_id "MSTRG.15916"; transcript_id "MSTRG.15916.1"; exon_number "1"; scaffold_130 StringTie exon 870063 870287 1000 . . gene_id "MSTRG.15921"; transcript_id "MSTRG.15921.1"; exon_number "1"; scaffold_13010 StringTie exon 4205 4547 1000 . . gene_id "MSTRG.15998"; transcript_id "MSTRG.15998.1"; exon_number "1"; scaffold_1302 StringTie exon 84717 85028 1000 . . gene_id "MSTRG.16028"; transcript_id "MSTRG.16028.1"; exon_number "1"; scaffold_13029 StringTie exon 2339 2597 1000 . . gene_id "MSTRG.16051"; transcript_id "MSTRG.16051.1"; exon_number "1"; scaffold_1303 StringTie exon 71191 71400 1000 . . gene_id "MSTRG.16062"; transcript_id "MSTRG.16062.1"; exon_number "1"; scaffold_13033 StringTie exon 9521 10079 1000 - . gene_id "MSTRG.16075"; transcript_id "MSTRG.16075.3"; exon_number "1"; scaffold_13033 StringTie exon 10151 10493 1000 - . gene_id "MSTRG.16075"; transcript_id "MSTRG.16075.3"; exon_number "2"; scaffold_13033 StringTie exon 10661 10723 1000 - . gene_id "MSTRG.16075"; transcript_id "MSTRG.16075.3"; exon_number "3"; scaffold_13033 StringTie exon 10802 10912 1000 - . gene_id "MSTRG.16075"; transcript_id "MSTRG.16075.3"; exon_number "4"; scaffold_13033 StringTie exon 11031 11141 1000 - . gene_id "MSTRG.16075"; transcript_id "MSTRG.16075.3"; exon_number "5"; scaffold_13036 StringTie exon 3616 4041 1000 . . gene_id "MSTRG.16078"; transcript_id "MSTRG.16078.1"; exon_number "1"; scaffold_1304 StringTie exon 63260 63603 1000 . . gene_id "MSTRG.16087"; transcript_id "MSTRG.16087.1"; exon_number "1"; scaffold_1304 StringTie exon 88411 88648 1000 . . gene_id "MSTRG.16090"; transcript_id "MSTRG.16090.1"; exon_number "1"; scaffold_1306 StringTie exon 3134 3479 1000 . . gene_id "MSTRG.16131"; transcript_id "MSTRG.16131.1"; exon_number "1"; scaffold_1307 StringTie exon 79782 80616 1000 . . gene_id "MSTRG.16156"; transcript_id "MSTRG.16156.1"; exon_number "1"; scaffold_1308 StringTie exon 18494 18614 1000 + . gene_id "MSTRG.16190"; transcript_id "MSTRG.16190.1"; exon_number "1"; scaffold_1308 StringTie exon 18688 18799 1000 + . gene_id "MSTRG.16190"; transcript_id "MSTRG.16190.1"; exon_number "2"; scaffold_1308 StringTie exon 19000 19115 1000 + . gene_id "MSTRG.16190"; transcript_id "MSTRG.16190.1"; exon_number "3"; scaffold_1308 StringTie exon 68332 68549 1000 . . gene_id "MSTRG.16194"; transcript_id "MSTRG.16194.1"; exon_number "1"; scaffold_1308 StringTie exon 87400 87837 1000 . . gene_id "MSTRG.16195"; transcript_id "MSTRG.16195.1"; exon_number "1"; scaffold_1309 StringTie exon 91779 92047 1000 . . gene_id "MSTRG.16217"; transcript_id "MSTRG.16217.1"; exon_number "1"; scaffold_1309 StringTie exon 195250 195456 1000 . . gene_id "MSTRG.16227"; transcript_id "MSTRG.16227.1"; exon_number "1"; scaffold_1309 StringTie exon 217787 218705 1000 . . gene_id "MSTRG.16231"; transcript_id "MSTRG.16231.1"; exon_number "1"; scaffold_131 StringTie exon 117627 117834 1000 . . gene_id "MSTRG.16265"; transcript_id "MSTRG.16265.1"; exon_number "1"; scaffold_131 StringTie exon 159435 159736 1000 - . gene_id "MSTRG.16271"; transcript_id "MSTRG.16271.1"; exon_number "1"; scaffold_131 StringTie exon 187692 187943 1000 . . gene_id "MSTRG.16277"; transcript_id "MSTRG.16277.1"; exon_number "1"; scaffold_131 StringTie exon 580447 580714 1000 . . gene_id "MSTRG.16291"; transcript_id "MSTRG.16291.1"; exon_number "1"; scaffold_131 StringTie exon 1166144 1166343 1000 . . gene_id "MSTRG.16314"; transcript_id "MSTRG.16314.1"; exon_number "1"; scaffold_131 StringTie exon 1263475 1263720 1000 . . gene_id "MSTRG.16324"; transcript_id "MSTRG.16324.1"; exon_number "1"; scaffold_131 StringTie exon 1393733 1393766 1000 + . gene_id "MSTRG.16333"; transcript_id "MSTRG.16333.2"; exon_number "1"; scaffold_131 StringTie exon 1397555 1397779 1000 + . gene_id "MSTRG.16333"; transcript_id "MSTRG.16333.2"; exon_number "2"; scaffold_131 StringTie exon 1432156 1432278 1000 + . gene_id "MSTRG.16338"; transcript_id "MSTRG.16338.1"; exon_number "1"; scaffold_131 StringTie exon 1432465 1432593 1000 + . gene_id "MSTRG.16338"; transcript_id "MSTRG.16338.1"; exon_number "2"; scaffold_131 StringTie exon 1433288 1433496 1000 + . gene_id "MSTRG.16338"; transcript_id "MSTRG.16338.1"; exon_number "3"; scaffold_131 StringTie exon 1434293 1434518 1000 + . gene_id "MSTRG.16338"; transcript_id "MSTRG.16338.1"; exon_number "4"; scaffold_131 StringTie exon 1435398 1435508 1000 + . gene_id "MSTRG.16338"; transcript_id "MSTRG.16338.1"; exon_number "5"; scaffold_131 StringTie exon 1435627 1435753 1000 + . gene_id "MSTRG.16338"; transcript_id "MSTRG.16338.1"; exon_number "6"; scaffold_131 StringTie exon 1435850 1435927 1000 + . gene_id "MSTRG.16338"; transcript_id "MSTRG.16338.1"; exon_number "7"; scaffold_131 StringTie exon 1436154 1436936 1000 + . gene_id "MSTRG.16338"; transcript_id "MSTRG.16338.1"; exon_number "8"; scaffold_131 StringTie exon 1534106 1534360 1000 . . gene_id "MSTRG.16348"; transcript_id "MSTRG.16348.1"; exon_number "1"; scaffold_1310 StringTie exon 167137 167784 1000 . . gene_id "MSTRG.16371"; transcript_id "MSTRG.16371.1"; exon_number "1"; scaffold_1311 StringTie exon 49666 50767 1000 . . gene_id "MSTRG.16392"; transcript_id "MSTRG.16392.1"; exon_number "1"; scaffold_1311 StringTie exon 88264 88655 1000 . . gene_id "MSTRG.16399"; transcript_id "MSTRG.16399.1"; exon_number "1"; scaffold_1311 StringTie exon 186337 186632 1000 . . gene_id "MSTRG.16410"; transcript_id "MSTRG.16410.1"; exon_number "1"; scaffold_13114 StringTie exon 12706 12989 1000 . . gene_id "MSTRG.16426"; transcript_id "MSTRG.16426.1"; exon_number "1"; scaffold_1312 StringTie exon 237979 238215 1000 . . gene_id "MSTRG.16450"; transcript_id "MSTRG.16450.1"; exon_number "1"; scaffold_13121 StringTie exon 15256 15506 1000 . . gene_id "MSTRG.16458"; transcript_id "MSTRG.16458.1"; exon_number "1"; scaffold_13136 StringTie exon 2175 2425 1000 + . gene_id "MSTRG.16497"; transcript_id "MSTRG.16497.1"; exon_number "1"; scaffold_13136 StringTie exon 2959 3074 1000 + . gene_id "MSTRG.16497"; transcript_id "MSTRG.16497.1"; exon_number "2"; scaffold_13137 StringTie exon 8725 8926 1000 . . gene_id "MSTRG.16500"; transcript_id "MSTRG.16500.1"; exon_number "1"; scaffold_13142 StringTie exon 2571 2942 1000 . . gene_id "MSTRG.16527"; transcript_id "MSTRG.16527.1"; exon_number "1"; scaffold_13149 StringTie exon 10154 10460 1000 + . gene_id "MSTRG.16535"; transcript_id "MSTRG.16535.1"; exon_number "1"; scaffold_13150 StringTie exon 14856 15087 1000 . . gene_id "MSTRG.16563"; transcript_id "MSTRG.16563.1"; exon_number "1"; scaffold_1316 StringTie exon 165402 165641 1000 . . gene_id "MSTRG.16585"; transcript_id "MSTRG.16585.1"; exon_number "1"; scaffold_1316 StringTie exon 244809 244818 1000 + . gene_id "MSTRG.16594"; transcript_id "MSTRG.16594.1"; exon_number "1"; scaffold_1316 StringTie exon 244935 245041 1000 + . gene_id "MSTRG.16594"; transcript_id "MSTRG.16594.1"; exon_number "2"; scaffold_1316 StringTie exon 248664 248780 1000 + . gene_id "MSTRG.16594"; transcript_id "MSTRG.16594.1"; exon_number "3"; scaffold_1317 StringTie exon 123743 124040 1000 . . gene_id "MSTRG.16613"; transcript_id "MSTRG.16613.1"; exon_number "1"; scaffold_13180 StringTie exon 14395 15017 1000 . . gene_id "MSTRG.16652"; transcript_id "MSTRG.16652.1"; exon_number "1"; scaffold_13189 StringTie exon 6489 6782 1000 . . gene_id "MSTRG.16662"; transcript_id "MSTRG.16662.1"; exon_number "1"; scaffold_132 StringTie exon 109351 109608 1000 . . gene_id "MSTRG.16695"; transcript_id "MSTRG.16695.1"; exon_number "1"; scaffold_132 StringTie exon 437017 437236 1000 . . gene_id "MSTRG.16721"; transcript_id "MSTRG.16721.1"; exon_number "1"; scaffold_132 StringTie exon 886375 887147 1000 . . gene_id "MSTRG.16749"; transcript_id "MSTRG.16749.1"; exon_number "1"; scaffold_132 StringTie exon 923426 923668 1000 . . gene_id "MSTRG.16758"; transcript_id "MSTRG.16758.1"; exon_number "1"; scaffold_132 StringTie exon 990739 990806 1000 + . gene_id "MSTRG.16770"; transcript_id "MSTRG.16770.1"; exon_number "1"; scaffold_132 StringTie exon 991172 991249 1000 + . gene_id "MSTRG.16770"; transcript_id "MSTRG.16770.1"; exon_number "2"; scaffold_132 StringTie exon 991542 991611 1000 + . gene_id "MSTRG.16770"; transcript_id "MSTRG.16770.1"; exon_number "3"; scaffold_132 StringTie exon 1087251 1087494 1000 . . gene_id "MSTRG.16775"; transcript_id "MSTRG.16775.1"; exon_number "1"; scaffold_1320 StringTie exon 10402 10603 1000 . . gene_id "MSTRG.16798"; transcript_id "MSTRG.16798.1"; exon_number "1"; scaffold_13202 StringTie exon 641 846 1000 . . gene_id "MSTRG.16824"; transcript_id "MSTRG.16824.1"; exon_number "1"; scaffold_13205 StringTie exon 2175 2492 1000 . . gene_id "MSTRG.16829"; transcript_id "MSTRG.16829.1"; exon_number "1"; scaffold_1321 StringTie exon 113070 113300 1000 . . gene_id "MSTRG.16839"; transcript_id "MSTRG.16839.1"; exon_number "1"; scaffold_1322 StringTie exon 132278 132774 1000 . . gene_id "MSTRG.16861"; transcript_id "MSTRG.16861.1"; exon_number "1"; scaffold_1322 StringTie exon 150050 150677 1000 - . gene_id "MSTRG.16864"; transcript_id "MSTRG.16864.1"; exon_number "1"; scaffold_13227 StringTie exon 1053 1277 1000 . . gene_id "MSTRG.16882"; transcript_id "MSTRG.16882.1"; exon_number "1"; scaffold_1323 StringTie exon 31274 31529 1000 . . gene_id "MSTRG.16885"; transcript_id "MSTRG.16885.1"; exon_number "1"; scaffold_1324 StringTie exon 57806 58046 1000 . . gene_id "MSTRG.16920"; transcript_id "MSTRG.16920.1"; exon_number "1"; scaffold_13241 StringTie exon 1 1209 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "1"; scaffold_13241 StringTie exon 1533 1696 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "2"; scaffold_13241 StringTie exon 2417 2692 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "3"; scaffold_13241 StringTie exon 3014 3166 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "4"; scaffold_13241 StringTie exon 3291 3432 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "5"; scaffold_13241 StringTie exon 7236 7375 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "6"; scaffold_13241 StringTie exon 7638 7756 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "7"; scaffold_13241 StringTie exon 8075 8302 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "8"; scaffold_13241 StringTie exon 8404 8575 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "9"; scaffold_13241 StringTie exon 8866 9020 1000 - . gene_id "MSTRG.16933"; transcript_id "MSTRG.16933.2"; exon_number "10"; scaffold_1325 StringTie exon 29585 29871 1000 . . gene_id "MSTRG.16951"; transcript_id "MSTRG.16951.1"; exon_number "1"; scaffold_1325 StringTie exon 95995 96103 1000 + . gene_id "MSTRG.16954"; transcript_id "MSTRG.16954.1"; exon_number "1"; scaffold_1325 StringTie exon 99408 99632 1000 + . gene_id "MSTRG.16954"; transcript_id "MSTRG.16954.1"; exon_number "2"; scaffold_1325 StringTie exon 105019 105126 1000 + . gene_id "MSTRG.16954"; transcript_id "MSTRG.16954.1"; exon_number "3"; scaffold_13261 StringTie exon 1 362 1000 - . gene_id "MSTRG.16991"; transcript_id "MSTRG.16991.1"; exon_number "1"; scaffold_13261 StringTie exon 1805 1859 1000 - . gene_id "MSTRG.16991"; transcript_id "MSTRG.16991.1"; exon_number "2"; scaffold_13261 StringTie exon 2000 2015 1000 - . gene_id "MSTRG.16991"; transcript_id "MSTRG.16991.1"; exon_number "3"; scaffold_13263 StringTie exon 6472 7295 1000 . . gene_id "MSTRG.16995"; transcript_id "MSTRG.16995.1"; exon_number "1"; scaffold_1327 StringTie exon 165746 166090 1000 . . gene_id "MSTRG.17019"; transcript_id "MSTRG.17019.1"; exon_number "1"; scaffold_1327 StringTie exon 221109 221323 1000 . . gene_id "MSTRG.17026"; transcript_id "MSTRG.17026.1"; exon_number "1"; scaffold_13279 StringTie exon 3771 3977 1000 . . gene_id "MSTRG.17043"; transcript_id "MSTRG.17043.1"; exon_number "1"; scaffold_1328 StringTie exon 152492 152779 1000 . . gene_id "MSTRG.17057"; transcript_id "MSTRG.17057.1"; exon_number "1"; scaffold_13281 StringTie exon 7856 8256 1000 . . gene_id "MSTRG.17066"; transcript_id "MSTRG.17066.1"; exon_number "1"; scaffold_1329 StringTie exon 153749 153957 1000 . . gene_id "MSTRG.17089"; transcript_id "MSTRG.17089.1"; exon_number "1"; scaffold_13291 StringTie exon 466 736 1000 . . gene_id "MSTRG.17096"; transcript_id "MSTRG.17096.1"; exon_number "1"; scaffold_13291 StringTie exon 10135 10477 1000 . . gene_id "MSTRG.17097"; transcript_id "MSTRG.17097.1"; exon_number "1"; scaffold_133 StringTie exon 15937 16263 1000 . . gene_id "MSTRG.17110"; transcript_id "MSTRG.17110.1"; exon_number "1"; scaffold_133 StringTie exon 121397 122103 1000 . . gene_id "MSTRG.17116"; transcript_id "MSTRG.17116.1"; exon_number "1"; scaffold_133 StringTie exon 722479 722783 1000 . . gene_id "MSTRG.17145"; transcript_id "MSTRG.17145.1"; exon_number "1"; scaffold_133 StringTie exon 970013 970235 1000 . . gene_id "MSTRG.17164"; transcript_id "MSTRG.17164.1"; exon_number "1"; scaffold_133 StringTie exon 1069056 1069272 1000 . . gene_id "MSTRG.17169"; transcript_id "MSTRG.17169.1"; exon_number "1"; scaffold_133 StringTie exon 1071630 1071735 1000 - . gene_id "MSTRG.17171"; transcript_id "MSTRG.17171.1"; exon_number "1"; scaffold_133 StringTie exon 1071892 1071937 1000 - . gene_id "MSTRG.17171"; transcript_id "MSTRG.17171.1"; exon_number "2"; scaffold_133 StringTie exon 1072117 1072207 1000 - . gene_id "MSTRG.17171"; transcript_id "MSTRG.17171.1"; exon_number "3"; scaffold_133 StringTie exon 1072495 1072667 1000 - . gene_id "MSTRG.17171"; transcript_id "MSTRG.17171.1"; exon_number "4"; scaffold_133 StringTie exon 1072792 1072844 1000 - . gene_id "MSTRG.17171"; transcript_id "MSTRG.17171.1"; exon_number "5"; scaffold_1332 StringTie exon 93177 94524 1000 - . gene_id "MSTRG.17254"; transcript_id "MSTRG.17254.1"; exon_number "1"; scaffold_1332 StringTie exon 95001 95072 1000 - . gene_id "MSTRG.17254"; transcript_id "MSTRG.17254.1"; exon_number "2"; scaffold_1332 StringTie exon 95554 96687 1000 - . gene_id "MSTRG.17254"; transcript_id "MSTRG.17254.1"; exon_number "3"; scaffold_1332 StringTie exon 97429 97615 1000 - . gene_id "MSTRG.17254"; transcript_id "MSTRG.17254.1"; exon_number "4"; scaffold_1332 StringTie exon 260273 260573 1000 . . gene_id "MSTRG.17274"; transcript_id "MSTRG.17274.1"; exon_number "1"; scaffold_13321 StringTie exon 10916 10982 1000 + . gene_id "MSTRG.17280"; transcript_id "MSTRG.17280.3"; exon_number "1"; scaffold_13321 StringTie exon 13007 13205 1000 + . gene_id "MSTRG.17280"; transcript_id "MSTRG.17280.3"; exon_number "2"; scaffold_13325 StringTie exon 9938 10209 1000 . . gene_id "MSTRG.17285"; transcript_id "MSTRG.17285.1"; exon_number "1"; scaffold_1333 StringTie exon 31008 31680 1000 . . gene_id "MSTRG.17294"; transcript_id "MSTRG.17294.1"; exon_number "1"; scaffold_1333 StringTie exon 46686 46838 1000 + . gene_id "MSTRG.17298"; transcript_id "MSTRG.17298.1"; exon_number "1"; scaffold_1333 StringTie exon 51331 51433 1000 + . gene_id "MSTRG.17298"; transcript_id "MSTRG.17298.1"; exon_number "2"; scaffold_1333 StringTie exon 51556 51678 1000 + . gene_id "MSTRG.17298"; transcript_id "MSTRG.17298.1"; exon_number "3"; scaffold_1333 StringTie exon 131911 132161 1000 . . gene_id "MSTRG.17311"; transcript_id "MSTRG.17311.1"; exon_number "1"; scaffold_1333 StringTie exon 183976 184214 1000 . . gene_id "MSTRG.17314"; transcript_id "MSTRG.17314.1"; exon_number "1"; scaffold_1333 StringTie exon 205241 205452 1000 . . gene_id "MSTRG.17315"; transcript_id "MSTRG.17315.1"; exon_number "1"; scaffold_1333 StringTie exon 221388 221716 1000 . . gene_id "MSTRG.17316"; transcript_id "MSTRG.17316.1"; exon_number "1"; scaffold_13336 StringTie exon 8681 8938 1000 . . gene_id "MSTRG.17323"; transcript_id "MSTRG.17323.1"; exon_number "1"; scaffold_13347 StringTie exon 6554 6761 1000 . . gene_id "MSTRG.17347"; transcript_id "MSTRG.17347.1"; exon_number "1"; scaffold_1335 StringTie exon 211498 211612 1000 + . gene_id "MSTRG.17365"; transcript_id "MSTRG.17365.1"; exon_number "1"; scaffold_1335 StringTie exon 224947 225410 1000 + . gene_id "MSTRG.17365"; transcript_id "MSTRG.17365.1"; exon_number "2"; scaffold_1336 StringTie exon 56298 57446 1000 - . gene_id "MSTRG.17380"; transcript_id "MSTRG.17380.2"; exon_number "1"; scaffold_1336 StringTie exon 58879 58980 1000 - . gene_id "MSTRG.17380"; transcript_id "MSTRG.17380.2"; exon_number "2"; scaffold_1336 StringTie exon 63137 63234 1000 - . gene_id "MSTRG.17380"; transcript_id "MSTRG.17380.2"; exon_number "3"; scaffold_1336 StringTie exon 63465 63710 1000 - . gene_id "MSTRG.17380"; transcript_id "MSTRG.17380.2"; exon_number "4"; scaffold_1336 StringTie exon 64267 64417 1000 - . gene_id "MSTRG.17380"; transcript_id "MSTRG.17380.2"; exon_number "5"; scaffold_1336 StringTie exon 64925 64952 1000 - . gene_id "MSTRG.17380"; transcript_id "MSTRG.17380.2"; exon_number "6"; scaffold_1336 StringTie exon 149580 149660 1000 + . gene_id "MSTRG.17391"; transcript_id "MSTRG.17391.1"; exon_number "1"; scaffold_1336 StringTie exon 150193 150283 1000 + . gene_id "MSTRG.17391"; transcript_id "MSTRG.17391.1"; exon_number "2"; scaffold_1336 StringTie exon 152302 152385 1000 + . gene_id "MSTRG.17391"; transcript_id "MSTRG.17391.1"; exon_number "3"; scaffold_1336 StringTie exon 153464 153583 1000 + . gene_id "MSTRG.17391"; transcript_id "MSTRG.17391.1"; exon_number "4"; scaffold_1336 StringTie exon 154036 154050 1000 + . gene_id "MSTRG.17391"; transcript_id "MSTRG.17391.1"; exon_number "5"; scaffold_1337 StringTie exon 17830 18311 1000 . . gene_id "MSTRG.17419"; transcript_id "MSTRG.17419.1"; exon_number "1"; scaffold_1337 StringTie exon 66678 66877 1000 . . gene_id "MSTRG.17421"; transcript_id "MSTRG.17421.1"; exon_number "1"; scaffold_1337 StringTie exon 80740 81272 1000 . . gene_id "MSTRG.17425"; transcript_id "MSTRG.17425.1"; exon_number "1"; scaffold_1337 StringTie exon 157187 157258 1000 - . gene_id "MSTRG.17432"; transcript_id "MSTRG.17432.1"; exon_number "1"; scaffold_1337 StringTie exon 157458 157648 1000 - . gene_id "MSTRG.17432"; transcript_id "MSTRG.17432.1"; exon_number "2"; scaffold_1337 StringTie exon 157798 157933 1000 - . gene_id "MSTRG.17432"; transcript_id "MSTRG.17432.1"; exon_number "3"; scaffold_1337 StringTie exon 158740 158919 1000 - . gene_id "MSTRG.17432"; transcript_id "MSTRG.17432.1"; exon_number "4"; scaffold_1337 StringTie exon 160694 160780 1000 - . gene_id "MSTRG.17432"; transcript_id "MSTRG.17432.1"; exon_number "5"; scaffold_1337 StringTie exon 160952 161054 1000 - . gene_id "MSTRG.17432"; transcript_id "MSTRG.17432.1"; exon_number "6"; scaffold_13373 StringTie exon 13611 13622 1000 - . gene_id "MSTRG.17449"; transcript_id "MSTRG.17449.1"; exon_number "1"; scaffold_13373 StringTie exon 13751 13922 1000 - . gene_id "MSTRG.17449"; transcript_id "MSTRG.17449.1"; exon_number "2"; scaffold_13373 StringTie exon 14254 14330 1000 - . gene_id "MSTRG.17449"; transcript_id "MSTRG.17449.1"; exon_number "3"; scaffold_13386 StringTie exon 2621 2753 1000 + . gene_id "MSTRG.17475"; transcript_id "MSTRG.17475.1"; exon_number "1"; scaffold_13386 StringTie exon 3358 3428 1000 + . gene_id "MSTRG.17475"; transcript_id "MSTRG.17475.1"; exon_number "2"; scaffold_13386 StringTie exon 3688 3787 1000 + . gene_id "MSTRG.17475"; transcript_id "MSTRG.17475.1"; exon_number "3"; scaffold_13386 StringTie exon 3994 4567 1000 + . gene_id "MSTRG.17475"; transcript_id "MSTRG.17475.1"; exon_number "4"; scaffold_134 StringTie exon 340245 340470 1000 . . gene_id "MSTRG.17530"; transcript_id "MSTRG.17530.1"; exon_number "1"; scaffold_134 StringTie exon 776462 777021 1000 . . gene_id "MSTRG.17558"; transcript_id "MSTRG.17558.1"; exon_number "1"; scaffold_134 StringTie exon 875988 876206 1000 . . gene_id "MSTRG.17566"; transcript_id "MSTRG.17566.1"; exon_number "1"; scaffold_134 StringTie exon 1538446 1539240 1000 . . gene_id "MSTRG.17605"; transcript_id "MSTRG.17605.1"; exon_number "1"; scaffold_1341 StringTie exon 225952 226377 1000 . . gene_id "MSTRG.17650"; transcript_id "MSTRG.17650.1"; exon_number "1"; scaffold_1341 StringTie exon 249355 249572 1000 . . gene_id "MSTRG.17653"; transcript_id "MSTRG.17653.1"; exon_number "1"; scaffold_1342 StringTie exon 202994 203044 1000 - . gene_id "MSTRG.17675"; transcript_id "MSTRG.17675.1"; exon_number "1"; scaffold_1342 StringTie exon 203718 204036 1000 - . gene_id "MSTRG.17675"; transcript_id "MSTRG.17675.1"; exon_number "2"; scaffold_13427 StringTie exon 12482 12697 1000 . . gene_id "MSTRG.17692"; transcript_id "MSTRG.17692.1"; exon_number "1"; scaffold_1343 StringTie exon 182179 182432 1000 . . gene_id "MSTRG.17722"; transcript_id "MSTRG.17722.1"; exon_number "1"; scaffold_13436 StringTie exon 11690 12181 1000 . . gene_id "MSTRG.17733"; transcript_id "MSTRG.17733.1"; exon_number "1"; scaffold_1344 StringTie exon 150052 150277 1000 + . gene_id "MSTRG.17746"; transcript_id "MSTRG.17746.1"; exon_number "1"; scaffold_1344 StringTie exon 150467 150512 1000 + . gene_id "MSTRG.17746"; transcript_id "MSTRG.17746.1"; exon_number "2"; scaffold_1344 StringTie exon 150844 150946 1000 + . gene_id "MSTRG.17746"; transcript_id "MSTRG.17746.1"; exon_number "3"; scaffold_1344 StringTie exon 217195 217472 1000 . . gene_id "MSTRG.17756"; transcript_id "MSTRG.17756.1"; exon_number "1"; scaffold_1345 StringTie exon 6008 6256 1000 . . gene_id "MSTRG.17786"; transcript_id "MSTRG.17786.1"; exon_number "1"; scaffold_1345 StringTie exon 113903 113964 1000 - . gene_id "MSTRG.17795"; transcript_id "MSTRG.17795.1"; exon_number "1"; scaffold_1345 StringTie exon 114054 114196 1000 - . gene_id "MSTRG.17795"; transcript_id "MSTRG.17795.1"; exon_number "2"; scaffold_1345 StringTie exon 114431 114550 1000 - . gene_id "MSTRG.17795"; transcript_id "MSTRG.17795.1"; exon_number "3"; scaffold_1345 StringTie exon 115783 115837 1000 - . gene_id "MSTRG.17795"; transcript_id "MSTRG.17795.1"; exon_number "4"; scaffold_1345 StringTie exon 177296 177399 1000 - . gene_id "MSTRG.17796"; transcript_id "MSTRG.17796.1"; exon_number "1"; scaffold_1345 StringTie exon 177426 177730 1000 - . gene_id "MSTRG.17796"; transcript_id "MSTRG.17796.1"; exon_number "2"; scaffold_13458 StringTie exon 6428 6646 1000 + . gene_id "MSTRG.17813"; transcript_id "MSTRG.17813.1"; exon_number "1"; scaffold_13458 StringTie exon 6762 6863 1000 + . gene_id "MSTRG.17813"; transcript_id "MSTRG.17813.1"; exon_number "2"; scaffold_13458 StringTie exon 6987 8080 1000 + . gene_id "MSTRG.17813"; transcript_id "MSTRG.17813.1"; exon_number "3"; scaffold_1346 StringTie exon 71110 71407 1000 . . gene_id "MSTRG.17823"; transcript_id "MSTRG.17823.1"; exon_number "1"; scaffold_1346 StringTie exon 175174 175233 1000 + . gene_id "MSTRG.17830"; transcript_id "MSTRG.17830.2"; exon_number "1"; scaffold_1346 StringTie exon 175272 175540 1000 + . gene_id "MSTRG.17830"; transcript_id "MSTRG.17830.2"; exon_number "2"; scaffold_1346 StringTie exon 239833 240071 1000 . . gene_id "MSTRG.17836"; transcript_id "MSTRG.17836.1"; exon_number "1"; scaffold_13461 StringTie exon 9780 10092 1000 . . gene_id "MSTRG.17839"; transcript_id "MSTRG.17839.1"; exon_number "1"; scaffold_1347 StringTie exon 107010 107605 1000 . . gene_id "MSTRG.17852"; transcript_id "MSTRG.17852.1"; exon_number "1"; scaffold_13476 StringTie exon 10186 10489 1000 . . gene_id "MSTRG.17867"; transcript_id "MSTRG.17867.1"; exon_number "1"; scaffold_13476 StringTie exon 11571 11910 1000 . . gene_id "MSTRG.17868"; transcript_id "MSTRG.17868.1"; exon_number "1"; scaffold_13477 StringTie exon 1625 1889 1000 . . gene_id "MSTRG.17871"; transcript_id "MSTRG.17871.1"; exon_number "1"; scaffold_13478 StringTie exon 12608 13181 1000 . . gene_id "MSTRG.17876"; transcript_id "MSTRG.17876.1"; exon_number "1"; scaffold_1349 StringTie exon 5114 5340 1000 . . gene_id "MSTRG.17913"; transcript_id "MSTRG.17913.1"; exon_number "1"; scaffold_13491 StringTie exon 11163 11565 1000 . . gene_id "MSTRG.17957"; transcript_id "MSTRG.17957.1"; exon_number "1"; scaffold_13498 StringTie exon 6168 6374 1000 . . gene_id "MSTRG.17968"; transcript_id "MSTRG.17968.1"; exon_number "1"; scaffold_135 StringTie exon 25038 25080 1000 + . gene_id "MSTRG.17974"; transcript_id "MSTRG.17974.1"; exon_number "1"; scaffold_135 StringTie exon 25615 25726 1000 + . gene_id "MSTRG.17974"; transcript_id "MSTRG.17974.1"; exon_number "2"; scaffold_135 StringTie exon 25876 25927 1000 + . gene_id "MSTRG.17974"; transcript_id "MSTRG.17974.1"; exon_number "3"; scaffold_135 StringTie exon 94505 94743 1000 . . gene_id "MSTRG.17988"; transcript_id "MSTRG.17988.1"; exon_number "1"; scaffold_135 StringTie exon 209282 209494 1000 . . gene_id "MSTRG.17997"; transcript_id "MSTRG.17997.1"; exon_number "1"; scaffold_135 StringTie exon 226494 226510 1000 - . gene_id "MSTRG.18002"; transcript_id "MSTRG.18002.1"; exon_number "1"; scaffold_135 StringTie exon 226692 226780 1000 - . gene_id "MSTRG.18002"; transcript_id "MSTRG.18002.1"; exon_number "2"; scaffold_135 StringTie exon 227306 227371 1000 - . gene_id "MSTRG.18002"; transcript_id "MSTRG.18002.1"; exon_number "3"; scaffold_135 StringTie exon 227705 227882 1000 - . gene_id "MSTRG.18002"; transcript_id "MSTRG.18002.1"; exon_number "4"; scaffold_135 StringTie exon 228139 228206 1000 - . gene_id "MSTRG.18002"; transcript_id "MSTRG.18002.1"; exon_number "5"; scaffold_135 StringTie exon 236591 236713 1000 - . gene_id "MSTRG.18006"; transcript_id "MSTRG.18006.1"; exon_number "1"; scaffold_135 StringTie exon 236907 237088 1000 - . gene_id "MSTRG.18006"; transcript_id "MSTRG.18006.1"; exon_number "2"; scaffold_135 StringTie exon 238647 238768 1000 - . gene_id "MSTRG.18008"; transcript_id "MSTRG.18008.1"; exon_number "1"; scaffold_135 StringTie exon 238868 239047 1000 - . gene_id "MSTRG.18008"; transcript_id "MSTRG.18008.1"; exon_number "2"; scaffold_135 StringTie exon 239281 239414 1000 - . gene_id "MSTRG.18008"; transcript_id "MSTRG.18008.1"; exon_number "3"; scaffold_135 StringTie exon 241897 241964 1000 - . gene_id "MSTRG.18008"; transcript_id "MSTRG.18008.1"; exon_number "4"; scaffold_135 StringTie exon 264956 265369 1000 . . gene_id "MSTRG.18011"; transcript_id "MSTRG.18011.1"; exon_number "1"; scaffold_135 StringTie exon 467983 468133 1000 - . gene_id "MSTRG.18023"; transcript_id "MSTRG.18023.1"; exon_number "1"; scaffold_135 StringTie exon 468307 468406 1000 - . gene_id "MSTRG.18023"; transcript_id "MSTRG.18023.1"; exon_number "2"; scaffold_135 StringTie exon 485330 485367 1000 - . gene_id "MSTRG.18023"; transcript_id "MSTRG.18023.1"; exon_number "3"; scaffold_135 StringTie exon 535292 535665 1000 . . gene_id "MSTRG.18030"; transcript_id "MSTRG.18030.1"; exon_number "1"; scaffold_135 StringTie exon 656161 656572 1000 . . gene_id "MSTRG.18048"; transcript_id "MSTRG.18048.1"; exon_number "1"; scaffold_135 StringTie exon 1011788 1012029 1000 . . gene_id "MSTRG.18067"; transcript_id "MSTRG.18067.1"; exon_number "1"; scaffold_135 StringTie exon 1413973 1414197 1000 . . gene_id "MSTRG.18087"; transcript_id "MSTRG.18087.1"; exon_number "1"; scaffold_135 StringTie exon 1505498 1505604 1000 + . gene_id "MSTRG.18092"; transcript_id "MSTRG.18092.1"; exon_number "1"; scaffold_135 StringTie exon 1505740 1505828 1000 + . gene_id "MSTRG.18092"; transcript_id "MSTRG.18092.1"; exon_number "2"; scaffold_135 StringTie exon 1508365 1508626 1000 + . gene_id "MSTRG.18092"; transcript_id "MSTRG.18092.1"; exon_number "3"; scaffold_135 StringTie exon 1510263 1510502 1000 . . gene_id "MSTRG.18093"; transcript_id "MSTRG.18093.1"; exon_number "1"; scaffold_1350 StringTie exon 34232 34538 1000 . . gene_id "MSTRG.18101"; transcript_id "MSTRG.18101.1"; exon_number "1"; scaffold_1350 StringTie exon 46880 47079 1000 . . gene_id "MSTRG.18102"; transcript_id "MSTRG.18102.1"; exon_number "1"; scaffold_1350 StringTie exon 168407 168614 1000 . . gene_id "MSTRG.18115"; transcript_id "MSTRG.18115.1"; exon_number "1"; scaffold_1350 StringTie exon 171505 171820 1000 . . gene_id "MSTRG.18116"; transcript_id "MSTRG.18116.1"; exon_number "1"; scaffold_1350 StringTie exon 201189 201989 1000 . . gene_id "MSTRG.18119"; transcript_id "MSTRG.18119.1"; exon_number "1"; scaffold_13505 StringTie exon 12719 13072 1000 . . gene_id "MSTRG.18125"; transcript_id "MSTRG.18125.1"; exon_number "1"; scaffold_13506 StringTie exon 634 960 1000 . . gene_id "MSTRG.18126"; transcript_id "MSTRG.18126.1"; exon_number "1"; scaffold_13518 StringTie exon 2461 2693 1000 . . gene_id "MSTRG.18150"; transcript_id "MSTRG.18150.1"; exon_number "1"; scaffold_13522 StringTie exon 818 1060 1000 . . gene_id "MSTRG.18168"; transcript_id "MSTRG.18168.1"; exon_number "1"; scaffold_13522 StringTie exon 8786 10069 1000 + . gene_id "MSTRG.18171"; transcript_id "MSTRG.18171.1"; exon_number "1"; scaffold_13522 StringTie exon 10200 10311 1000 + . gene_id "MSTRG.18171"; transcript_id "MSTRG.18171.1"; exon_number "2"; scaffold_1353 StringTie exon 79967 80667 1000 + . gene_id "MSTRG.18194"; transcript_id "MSTRG.18194.1"; exon_number "1"; scaffold_1353 StringTie exon 81021 81098 1000 + . gene_id "MSTRG.18194"; transcript_id "MSTRG.18194.1"; exon_number "2"; scaffold_1353 StringTie exon 81202 81266 1000 + . gene_id "MSTRG.18194"; transcript_id "MSTRG.18194.1"; exon_number "3"; scaffold_1353 StringTie exon 110305 110610 1000 . . gene_id "MSTRG.18201"; transcript_id "MSTRG.18201.1"; exon_number "1"; scaffold_1353 StringTie exon 141809 141916 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "1"; scaffold_1353 StringTie exon 142039 142212 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "2"; scaffold_1353 StringTie exon 142486 142659 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "3"; scaffold_1353 StringTie exon 142935 143206 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "4"; scaffold_1353 StringTie exon 145259 145354 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "5"; scaffold_1353 StringTie exon 145437 145580 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "6"; scaffold_1353 StringTie exon 145660 145758 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "7"; scaffold_1353 StringTie exon 146487 146550 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "8"; scaffold_1353 StringTie exon 146670 146762 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "9"; scaffold_1353 StringTie exon 149346 149439 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "10"; scaffold_1353 StringTie exon 149587 149614 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "11"; scaffold_1353 StringTie exon 150407 150563 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "12"; scaffold_1353 StringTie exon 152175 152509 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "13"; scaffold_1353 StringTie exon 164389 164648 1000 - . gene_id "MSTRG.18205"; transcript_id "MSTRG.18205.2"; exon_number "14"; scaffold_13530 StringTie exon 9010 9444 1000 + . gene_id "MSTRG.18212"; transcript_id "MSTRG.18212.1"; exon_number "1"; scaffold_1354 StringTie exon 170105 170432 1000 . . gene_id "MSTRG.18229"; transcript_id "MSTRG.18229.1"; exon_number "1"; scaffold_1355 StringTie exon 244294 244420 1000 + . gene_id "MSTRG.18266"; transcript_id "MSTRG.18266.1"; exon_number "1"; scaffold_1355 StringTie exon 244575 244714 1000 + . gene_id "MSTRG.18266"; transcript_id "MSTRG.18266.1"; exon_number "2"; scaffold_1355 StringTie exon 245104 245297 1000 + . gene_id "MSTRG.18266"; transcript_id "MSTRG.18266.1"; exon_number "3"; scaffold_1355 StringTie exon 245528 246306 1000 + . gene_id "MSTRG.18266"; transcript_id "MSTRG.18266.1"; exon_number "4"; scaffold_1357 StringTie exon 232858 235193 1000 - . gene_id "MSTRG.18322"; transcript_id "MSTRG.18322.1"; exon_number "1"; scaffold_1357 StringTie exon 235310 235356 1000 - . gene_id "MSTRG.18322"; transcript_id "MSTRG.18322.1"; exon_number "2"; scaffold_13573 StringTie exon 11100 12436 1000 - . gene_id "MSTRG.18331"; transcript_id "MSTRG.18331.1"; exon_number "1"; scaffold_1358 StringTie exon 2542 2789 1000 . . gene_id "MSTRG.18339"; transcript_id "MSTRG.18339.1"; exon_number "1"; scaffold_1358 StringTie exon 83162 83275 1000 + . gene_id "MSTRG.18347"; transcript_id "MSTRG.18347.1"; exon_number "1"; scaffold_1358 StringTie exon 83765 83969 1000 + . gene_id "MSTRG.18347"; transcript_id "MSTRG.18347.1"; exon_number "2"; scaffold_1358 StringTie exon 131725 132246 1000 . . gene_id "MSTRG.18354"; transcript_id "MSTRG.18354.1"; exon_number "1"; scaffold_1358 StringTie exon 166162 166236 1000 + . gene_id "MSTRG.18362"; transcript_id "MSTRG.18362.1"; exon_number "1"; scaffold_1358 StringTie exon 166376 166598 1000 + . gene_id "MSTRG.18362"; transcript_id "MSTRG.18362.1"; exon_number "2"; scaffold_1358 StringTie exon 166843 167156 1000 + . gene_id "MSTRG.18362"; transcript_id "MSTRG.18362.1"; exon_number "3"; scaffold_1359 StringTie exon 226264 226580 1000 . . gene_id "MSTRG.18388"; transcript_id "MSTRG.18388.1"; exon_number "1"; scaffold_136 StringTie exon 470860 471092 1000 . . gene_id "MSTRG.18424"; transcript_id "MSTRG.18424.1"; exon_number "1"; scaffold_136 StringTie exon 793598 793895 1000 . . gene_id "MSTRG.18446"; transcript_id "MSTRG.18446.1"; exon_number "1"; scaffold_136 StringTie exon 909275 909504 1000 . . gene_id "MSTRG.18450"; transcript_id "MSTRG.18450.1"; exon_number "1"; scaffold_136 StringTie exon 1146109 1146390 1000 . . gene_id "MSTRG.18466"; transcript_id "MSTRG.18466.1"; exon_number "1"; scaffold_136 StringTie exon 1376736 1376960 1000 - . gene_id "MSTRG.18477"; transcript_id "MSTRG.18477.1"; exon_number "1"; scaffold_136 StringTie exon 1377065 1377165 1000 - . gene_id "MSTRG.18477"; transcript_id "MSTRG.18477.1"; exon_number "2"; scaffold_136 StringTie exon 1377291 1377406 1000 - . gene_id "MSTRG.18477"; transcript_id "MSTRG.18477.1"; exon_number "3"; scaffold_1362 StringTie exon 45037 45394 1000 . . gene_id "MSTRG.18540"; transcript_id "MSTRG.18540.1"; exon_number "1"; scaffold_1362 StringTie exon 107039 107390 1000 . . gene_id "MSTRG.18543"; transcript_id "MSTRG.18543.1"; exon_number "1"; scaffold_13629 StringTie exon 4319 4566 1000 . . gene_id "MSTRG.18555"; transcript_id "MSTRG.18555.1"; exon_number "1"; scaffold_1364 StringTie exon 110864 111082 1000 . . gene_id "MSTRG.18606"; transcript_id "MSTRG.18606.1"; exon_number "1"; scaffold_13640 StringTie exon 6275 6580 1000 . . gene_id "MSTRG.18614"; transcript_id "MSTRG.18614.1"; exon_number "1"; scaffold_13641 StringTie exon 282 705 1000 . . gene_id "MSTRG.18615"; transcript_id "MSTRG.18615.1"; exon_number "1"; scaffold_13647 StringTie exon 4808 5760 1000 . . gene_id "MSTRG.18623"; transcript_id "MSTRG.18623.1"; exon_number "1"; scaffold_1365 StringTie exon 43483 43664 1000 + . gene_id "MSTRG.18630"; transcript_id "MSTRG.18630.1"; exon_number "1"; scaffold_1365 StringTie exon 45581 45649 1000 + . gene_id "MSTRG.18630"; transcript_id "MSTRG.18630.1"; exon_number "2"; scaffold_1365 StringTie exon 45747 45882 1000 + . gene_id "MSTRG.18630"; transcript_id "MSTRG.18630.1"; exon_number "3"; scaffold_1365 StringTie exon 46872 47062 1000 + . gene_id "MSTRG.18630"; transcript_id "MSTRG.18630.1"; exon_number "4"; scaffold_1365 StringTie exon 47806 47858 1000 + . gene_id "MSTRG.18630"; transcript_id "MSTRG.18630.1"; exon_number "5"; scaffold_1366 StringTie exon 72348 72572 1000 . . gene_id "MSTRG.18657"; transcript_id "MSTRG.18657.1"; exon_number "1"; scaffold_13669 StringTie exon 8098 8256 1000 + . gene_id "MSTRG.18673"; transcript_id "MSTRG.18673.1"; exon_number "1"; scaffold_13669 StringTie exon 8377 8443 1000 + . gene_id "MSTRG.18673"; transcript_id "MSTRG.18673.1"; exon_number "2"; scaffold_13669 StringTie exon 8790 9894 1000 + . gene_id "MSTRG.18673"; transcript_id "MSTRG.18673.1"; exon_number "3"; scaffold_1367 StringTie exon 201148 201219 1000 - . gene_id "MSTRG.18694"; transcript_id "MSTRG.18694.1"; exon_number "1"; scaffold_1367 StringTie exon 202412 202591 1000 - . gene_id "MSTRG.18694"; transcript_id "MSTRG.18694.1"; exon_number "2"; scaffold_1368 StringTie exon 26221 26488 1000 . . gene_id "MSTRG.18709"; transcript_id "MSTRG.18709.1"; exon_number "1"; scaffold_1368 StringTie exon 88920 89278 1000 . . gene_id "MSTRG.18715"; transcript_id "MSTRG.18715.1"; exon_number "1"; scaffold_13685 StringTie exon 287 498 1000 . . gene_id "MSTRG.18736"; transcript_id "MSTRG.18736.1"; exon_number "1"; scaffold_13686 StringTie exon 14079 14336 1000 . . gene_id "MSTRG.18738"; transcript_id "MSTRG.18738.1"; exon_number "1"; scaffold_137 StringTie exon 50971 51190 1000 . . gene_id "MSTRG.18765"; transcript_id "MSTRG.18765.1"; exon_number "1"; scaffold_137 StringTie exon 573462 573528 1000 - . gene_id "MSTRG.18789"; transcript_id "MSTRG.18789.1"; exon_number "1"; scaffold_137 StringTie exon 573951 574121 1000 - . gene_id "MSTRG.18789"; transcript_id "MSTRG.18789.1"; exon_number "2"; scaffold_137 StringTie exon 747259 747495 1000 . . gene_id "MSTRG.18796"; transcript_id "MSTRG.18796.1"; exon_number "1"; scaffold_137 StringTie exon 1175713 1175988 1000 . . gene_id "MSTRG.18815"; transcript_id "MSTRG.18815.1"; exon_number "1"; scaffold_137 StringTie exon 1282598 1282810 1000 . . gene_id "MSTRG.18821"; transcript_id "MSTRG.18821.1"; exon_number "1"; scaffold_137 StringTie exon 1297737 1297962 1000 . . gene_id "MSTRG.18822"; transcript_id "MSTRG.18822.1"; exon_number "1"; scaffold_137 StringTie exon 1383422 1383757 1000 . . gene_id "MSTRG.18827"; transcript_id "MSTRG.18827.1"; exon_number "1"; scaffold_1370 StringTie exon 197253 198063 1000 . . gene_id "MSTRG.18844"; transcript_id "MSTRG.18844.1"; exon_number "1"; scaffold_1370 StringTie exon 217308 217441 1000 - . gene_id "MSTRG.18849"; transcript_id "MSTRG.18849.2"; exon_number "1"; scaffold_1370 StringTie exon 218453 218534 1000 - . gene_id "MSTRG.18849"; transcript_id "MSTRG.18849.2"; exon_number "2"; scaffold_13705 StringTie exon 4110 4348 1000 . . gene_id "MSTRG.18859"; transcript_id "MSTRG.18859.1"; exon_number "1"; scaffold_1371 StringTie exon 73528 73923 1000 . . gene_id "MSTRG.18869"; transcript_id "MSTRG.18869.1"; exon_number "1"; scaffold_1371 StringTie exon 74624 74845 1000 . . gene_id "MSTRG.18870"; transcript_id "MSTRG.18870.1"; exon_number "1"; scaffold_1371 StringTie exon 117804 118105 1000 . . gene_id "MSTRG.18875"; transcript_id "MSTRG.18875.1"; exon_number "1"; scaffold_1371 StringTie exon 249982 250221 1000 . . gene_id "MSTRG.18885"; transcript_id "MSTRG.18885.1"; exon_number "1"; scaffold_13716 StringTie exon 11285 11520 1000 . . gene_id "MSTRG.18892"; transcript_id "MSTRG.18892.1"; exon_number "1"; scaffold_1372 StringTie exon 224025 224262 1000 . . gene_id "MSTRG.18907"; transcript_id "MSTRG.18907.1"; exon_number "1"; scaffold_1373 StringTie exon 26982 27334 1000 . . gene_id "MSTRG.18926"; transcript_id "MSTRG.18926.1"; exon_number "1"; scaffold_1374 StringTie exon 159242 159723 1000 + . gene_id "MSTRG.18968"; transcript_id "MSTRG.18968.1"; exon_number "1"; scaffold_1374 StringTie exon 161322 161408 1000 + . gene_id "MSTRG.18968"; transcript_id "MSTRG.18968.1"; exon_number "2"; scaffold_1375 StringTie exon 44476 44964 1000 . . gene_id "MSTRG.19002"; transcript_id "MSTRG.19002.1"; exon_number "1"; scaffold_13754 StringTie exon 14511 14736 1000 . . gene_id "MSTRG.19019"; transcript_id "MSTRG.19019.1"; exon_number "1"; scaffold_1376 StringTie exon 7578 7845 1000 - . gene_id "MSTRG.19028"; transcript_id "MSTRG.19028.1"; exon_number "1"; scaffold_1376 StringTie exon 8056 8116 1000 - . gene_id "MSTRG.19028"; transcript_id "MSTRG.19028.1"; exon_number "2"; scaffold_1376 StringTie exon 64331 64688 1000 . . gene_id "MSTRG.19032"; transcript_id "MSTRG.19032.1"; exon_number "1"; scaffold_13769 StringTie exon 9523 10509 1000 . . gene_id "MSTRG.19067"; transcript_id "MSTRG.19067.1"; exon_number "1"; scaffold_13770 StringTie exon 9549 9765 1000 . . gene_id "MSTRG.19090"; transcript_id "MSTRG.19090.1"; exon_number "1"; scaffold_13773 StringTie exon 10231 10468 1000 . . gene_id "MSTRG.19093"; transcript_id "MSTRG.19093.1"; exon_number "1"; scaffold_1378 StringTie exon 128267 128496 1000 . . gene_id "MSTRG.19119"; transcript_id "MSTRG.19119.1"; exon_number "1"; scaffold_1378 StringTie exon 174910 175280 1000 . . gene_id "MSTRG.19126"; transcript_id "MSTRG.19126.1"; exon_number "1"; scaffold_1378 StringTie exon 199864 200155 1000 . . gene_id "MSTRG.19133"; transcript_id "MSTRG.19133.1"; exon_number "1"; scaffold_13786 StringTie exon 1431 1652 1000 . . gene_id "MSTRG.19142"; transcript_id "MSTRG.19142.1"; exon_number "1"; scaffold_13793 StringTie exon 4529 4667 1000 - . gene_id "MSTRG.19165"; transcript_id "MSTRG.19165.1"; exon_number "1"; scaffold_13793 StringTie exon 5231 5292 1000 - . gene_id "MSTRG.19165"; transcript_id "MSTRG.19165.1"; exon_number "2"; scaffold_13793 StringTie exon 7946 8126 1000 - . gene_id "MSTRG.19165"; transcript_id "MSTRG.19165.1"; exon_number "3"; scaffold_13793 StringTie exon 8822 8971 1000 - . gene_id "MSTRG.19165"; transcript_id "MSTRG.19165.1"; exon_number "4"; scaffold_13793 StringTie exon 9565 9644 1000 - . gene_id "MSTRG.19165"; transcript_id "MSTRG.19165.1"; exon_number "5"; scaffold_13793 StringTie exon 10254 10344 1000 - . gene_id "MSTRG.19165"; transcript_id "MSTRG.19165.1"; exon_number "6"; scaffold_13793 StringTie exon 12287 12466 1000 - . gene_id "MSTRG.19165"; transcript_id "MSTRG.19165.1"; exon_number "7"; scaffold_13794 StringTie exon 12410 12687 1000 . . gene_id "MSTRG.19166"; transcript_id "MSTRG.19166.1"; exon_number "1"; scaffold_138 StringTie exon 142831 143095 1000 . . gene_id "MSTRG.19180"; transcript_id "MSTRG.19180.1"; exon_number "1"; scaffold_138 StringTie exon 145931 146265 1000 . . gene_id "MSTRG.19182"; transcript_id "MSTRG.19182.1"; exon_number "1"; scaffold_138 StringTie exon 148092 148302 1000 . . gene_id "MSTRG.19184"; transcript_id "MSTRG.19184.1"; exon_number "1"; scaffold_138 StringTie exon 220084 220130 1000 + . gene_id "MSTRG.19194"; transcript_id "MSTRG.19194.1"; exon_number "1"; scaffold_138 StringTie exon 220328 220445 1000 + . gene_id "MSTRG.19194"; transcript_id "MSTRG.19194.1"; exon_number "2"; scaffold_138 StringTie exon 220902 221045 1000 + . gene_id "MSTRG.19194"; transcript_id "MSTRG.19194.1"; exon_number "3"; scaffold_138 StringTie exon 221262 221277 1000 + . gene_id "MSTRG.19194"; transcript_id "MSTRG.19194.1"; exon_number "4"; scaffold_138 StringTie exon 244596 244978 1000 . . gene_id "MSTRG.19196"; transcript_id "MSTRG.19196.1"; exon_number "1"; scaffold_138 StringTie exon 284680 285519 1000 . . gene_id "MSTRG.19200"; transcript_id "MSTRG.19200.1"; exon_number "1"; scaffold_138 StringTie exon 961451 961665 1000 . . gene_id "MSTRG.19248"; transcript_id "MSTRG.19248.1"; exon_number "1"; scaffold_138 StringTie exon 991254 991522 1000 . . gene_id "MSTRG.19252"; transcript_id "MSTRG.19252.1"; exon_number "1"; scaffold_138 StringTie exon 1168719 1168773 1000 - . gene_id "MSTRG.19266"; transcript_id "MSTRG.19266.1"; exon_number "1"; scaffold_138 StringTie exon 1168852 1168920 1000 - . gene_id "MSTRG.19266"; transcript_id "MSTRG.19266.1"; exon_number "2"; scaffold_138 StringTie exon 1169571 1169727 1000 - . gene_id "MSTRG.19266"; transcript_id "MSTRG.19266.1"; exon_number "3"; scaffold_138 StringTie exon 1169857 1169974 1000 - . gene_id "MSTRG.19266"; transcript_id "MSTRG.19266.1"; exon_number "4"; scaffold_138 StringTie exon 1170100 1170292 1000 - . gene_id "MSTRG.19266"; transcript_id "MSTRG.19266.1"; exon_number "5"; scaffold_138 StringTie exon 1171923 1172145 1000 - . gene_id "MSTRG.19266"; transcript_id "MSTRG.19266.1"; exon_number "6"; scaffold_138 StringTie exon 1172382 1172622 1000 - . gene_id "MSTRG.19266"; transcript_id "MSTRG.19266.1"; exon_number "7"; scaffold_138 StringTie exon 1172787 1173086 1000 - . gene_id "MSTRG.19266"; transcript_id "MSTRG.19266.1"; exon_number "8"; scaffold_1380 StringTie exon 65723 65955 1000 . . gene_id "MSTRG.19313"; transcript_id "MSTRG.19313.1"; exon_number "1"; scaffold_1381 StringTie exon 180817 181092 1000 . . gene_id "MSTRG.19337"; transcript_id "MSTRG.19337.1"; exon_number "1"; scaffold_1381 StringTie exon 204556 204832 1000 . . gene_id "MSTRG.19338"; transcript_id "MSTRG.19338.1"; exon_number "1"; scaffold_13817 StringTie exon 13712 14414 1000 . . gene_id "MSTRG.19356"; transcript_id "MSTRG.19356.1"; exon_number "1"; scaffold_1382 StringTie exon 177889 177975 1000 - . gene_id "MSTRG.19374"; transcript_id "MSTRG.19374.1"; exon_number "1"; scaffold_1382 StringTie exon 178252 178306 1000 - . gene_id "MSTRG.19374"; transcript_id "MSTRG.19374.1"; exon_number "2"; scaffold_1382 StringTie exon 184461 184567 1000 - . gene_id "MSTRG.19374"; transcript_id "MSTRG.19374.1"; exon_number "3"; scaffold_1382 StringTie exon 202440 202503 1000 - . gene_id "MSTRG.19374"; transcript_id "MSTRG.19374.1"; exon_number "4"; scaffold_1383 StringTie exon 5608 5762 1000 + . gene_id "MSTRG.19390"; transcript_id "MSTRG.19390.1"; exon_number "1"; scaffold_1383 StringTie exon 5908 6105 1000 + . gene_id "MSTRG.19390"; transcript_id "MSTRG.19390.1"; exon_number "2"; scaffold_1383 StringTie exon 6437 6569 1000 + . gene_id "MSTRG.19390"; transcript_id "MSTRG.19390.1"; exon_number "3"; scaffold_1383 StringTie exon 7346 8200 1000 + . gene_id "MSTRG.19390"; transcript_id "MSTRG.19390.1"; exon_number "4"; scaffold_13836 StringTie exon 4458 4725 1000 + . gene_id "MSTRG.19418"; transcript_id "MSTRG.19418.1"; exon_number "1"; scaffold_13836 StringTie exon 6616 6795 1000 + . gene_id "MSTRG.19418"; transcript_id "MSTRG.19418.1"; exon_number "2"; scaffold_13836 StringTie exon 7151 7316 1000 + . gene_id "MSTRG.19418"; transcript_id "MSTRG.19418.1"; exon_number "3"; scaffold_13836 StringTie exon 7678 7823 1000 + . gene_id "MSTRG.19418"; transcript_id "MSTRG.19418.1"; exon_number "4"; scaffold_1384 StringTie exon 49894 50115 1000 . . gene_id "MSTRG.19429"; transcript_id "MSTRG.19429.1"; exon_number "1"; scaffold_1384 StringTie exon 229306 229798 1000 . . gene_id "MSTRG.19445"; transcript_id "MSTRG.19445.1"; exon_number "1"; scaffold_1384 StringTie exon 231747 231844 1000 - . gene_id "MSTRG.19447"; transcript_id "MSTRG.19447.1"; exon_number "1"; scaffold_1384 StringTie exon 234931 235087 1000 - . gene_id "MSTRG.19447"; transcript_id "MSTRG.19447.1"; exon_number "2"; scaffold_13849 StringTie exon 5646 6300 1000 . . gene_id "MSTRG.19460"; transcript_id "MSTRG.19460.1"; exon_number "1"; scaffold_13849 StringTie exon 11159 11777 1000 . . gene_id "MSTRG.19464"; transcript_id "MSTRG.19464.1"; exon_number "1"; scaffold_1386 StringTie exon 53870 54099 1000 . . gene_id "MSTRG.19486"; transcript_id "MSTRG.19486.1"; exon_number "1"; scaffold_1386 StringTie exon 167164 167369 1000 . . gene_id "MSTRG.19490"; transcript_id "MSTRG.19490.1"; exon_number "1"; scaffold_13866 StringTie exon 1110 1392 1000 . . gene_id "MSTRG.19498"; transcript_id "MSTRG.19498.1"; exon_number "1"; scaffold_1387 StringTie exon 131370 131602 1000 . . gene_id "MSTRG.19512"; transcript_id "MSTRG.19512.1"; exon_number "1"; scaffold_1387 StringTie exon 138656 138884 1000 . . gene_id "MSTRG.19515"; transcript_id "MSTRG.19515.1"; exon_number "1"; scaffold_1387 StringTie exon 197079 197347 1000 . . gene_id "MSTRG.19520"; transcript_id "MSTRG.19520.1"; exon_number "1"; scaffold_1388 StringTie exon 68578 68822 1000 . . gene_id "MSTRG.19530"; transcript_id "MSTRG.19530.1"; exon_number "1"; scaffold_1389 StringTie exon 114284 114539 1000 . . gene_id "MSTRG.19559"; transcript_id "MSTRG.19559.1"; exon_number "1"; scaffold_13895 StringTie exon 12702 13103 1000 . . gene_id "MSTRG.19575"; transcript_id "MSTRG.19575.1"; exon_number "1"; scaffold_139 StringTie exon 23129 23345 1000 . . gene_id "MSTRG.19585"; transcript_id "MSTRG.19585.1"; exon_number "1"; scaffold_139 StringTie exon 462917 462978 1000 - . gene_id "MSTRG.19615"; transcript_id "MSTRG.19615.1"; exon_number "1"; scaffold_139 StringTie exon 489774 490055 1000 - . gene_id "MSTRG.19615"; transcript_id "MSTRG.19615.1"; exon_number "2"; scaffold_139 StringTie exon 486580 486823 1000 . . gene_id "MSTRG.19618"; transcript_id "MSTRG.19618.1"; exon_number "1"; scaffold_139 StringTie exon 680825 680854 1000 + . gene_id "MSTRG.19633"; transcript_id "MSTRG.19633.1"; exon_number "1"; scaffold_139 StringTie exon 681156 681203 1000 + . gene_id "MSTRG.19633"; transcript_id "MSTRG.19633.1"; exon_number "2"; scaffold_139 StringTie exon 681324 681454 1000 + . gene_id "MSTRG.19633"; transcript_id "MSTRG.19633.1"; exon_number "3"; scaffold_139 StringTie exon 681549 682094 1000 + . gene_id "MSTRG.19633"; transcript_id "MSTRG.19633.1"; exon_number "4"; scaffold_139 StringTie exon 740064 740465 1000 . . gene_id "MSTRG.19640"; transcript_id "MSTRG.19640.1"; exon_number "1"; scaffold_139 StringTie exon 758015 758964 1000 . . gene_id "MSTRG.19644"; transcript_id "MSTRG.19644.1"; exon_number "1"; scaffold_139 StringTie exon 862297 862563 1000 . . gene_id "MSTRG.19654"; transcript_id "MSTRG.19654.1"; exon_number "1"; scaffold_139 StringTie exon 1317888 1318104 1000 . . gene_id "MSTRG.19684"; transcript_id "MSTRG.19684.1"; exon_number "1"; scaffold_1390 StringTie exon 71660 73103 1000 . . gene_id "MSTRG.19703"; transcript_id "MSTRG.19703.1"; exon_number "1"; scaffold_13907 StringTie exon 75 178 1000 - . gene_id "MSTRG.19722"; transcript_id "MSTRG.19722.1"; exon_number "1"; scaffold_13907 StringTie exon 924 949 1000 - . gene_id "MSTRG.19722"; transcript_id "MSTRG.19722.1"; exon_number "2"; scaffold_13907 StringTie exon 1097 1202 1000 - . gene_id "MSTRG.19722"; transcript_id "MSTRG.19722.1"; exon_number "3"; scaffold_13907 StringTie exon 1746 1878 1000 - . gene_id "MSTRG.19722"; transcript_id "MSTRG.19722.1"; exon_number "4"; scaffold_13909 StringTie exon 7024 7273 1000 + . gene_id "MSTRG.19724"; transcript_id "MSTRG.19724.1"; exon_number "1"; scaffold_13909 StringTie exon 9156 9295 1000 + . gene_id "MSTRG.19724"; transcript_id "MSTRG.19724.1"; exon_number "2"; scaffold_13909 StringTie exon 9411 10109 1000 + . gene_id "MSTRG.19724"; transcript_id "MSTRG.19724.1"; exon_number "3"; scaffold_1391 StringTie exon 20487 20748 1000 . . gene_id "MSTRG.19730"; transcript_id "MSTRG.19730.1"; exon_number "1"; scaffold_1391 StringTie exon 220061 220573 1000 . . gene_id "MSTRG.19743"; transcript_id "MSTRG.19743.1"; exon_number "1"; scaffold_13918 StringTie exon 7439 7640 1000 . . gene_id "MSTRG.19754"; transcript_id "MSTRG.19754.1"; exon_number "1"; scaffold_1392 StringTie exon 76557 76636 1000 + . gene_id "MSTRG.19757"; transcript_id "MSTRG.19757.1"; exon_number "1"; scaffold_1392 StringTie exon 77653 77816 1000 + . gene_id "MSTRG.19757"; transcript_id "MSTRG.19757.1"; exon_number "2"; scaffold_1392 StringTie exon 80801 80941 1000 + . gene_id "MSTRG.19757"; transcript_id "MSTRG.19757.1"; exon_number "3"; scaffold_1392 StringTie exon 81124 81219 1000 + . gene_id "MSTRG.19757"; transcript_id "MSTRG.19757.1"; exon_number "4"; scaffold_1392 StringTie exon 84505 84582 1000 + . gene_id "MSTRG.19757"; transcript_id "MSTRG.19757.1"; exon_number "5"; scaffold_1392 StringTie exon 88252 91330 1000 + . gene_id "MSTRG.19757"; transcript_id "MSTRG.19757.1"; exon_number "6"; scaffold_1392 StringTie exon 156711 156743 1000 - . gene_id "MSTRG.19763"; transcript_id "MSTRG.19763.1"; exon_number "1"; scaffold_1392 StringTie exon 159322 159769 1000 - . gene_id "MSTRG.19763"; transcript_id "MSTRG.19763.1"; exon_number "2"; scaffold_13920 StringTie exon 3017 3209 1000 - . gene_id "MSTRG.19767"; transcript_id "MSTRG.19767.1"; exon_number "1"; scaffold_13920 StringTie exon 5609 5719 1000 - . gene_id "MSTRG.19767"; transcript_id "MSTRG.19767.1"; exon_number "2"; scaffold_13920 StringTie exon 5898 6042 1000 - . gene_id "MSTRG.19767"; transcript_id "MSTRG.19767.1"; exon_number "3"; scaffold_13920 StringTie exon 9441 9602 1000 - . gene_id "MSTRG.19767"; transcript_id "MSTRG.19767.1"; exon_number "4"; scaffold_13920 StringTie exon 10922 11115 1000 - . gene_id "MSTRG.19767"; transcript_id "MSTRG.19767.1"; exon_number "5"; scaffold_13920 StringTie exon 11232 11444 1000 - . gene_id "MSTRG.19767"; transcript_id "MSTRG.19767.1"; exon_number "6"; scaffold_13920 StringTie exon 12086 12108 1000 - . gene_id "MSTRG.19767"; transcript_id "MSTRG.19767.1"; exon_number "7"; scaffold_13923 StringTie exon 9641 9851 1000 . . gene_id "MSTRG.19770"; transcript_id "MSTRG.19770.1"; exon_number "1"; scaffold_1394 StringTie exon 87917 88215 1000 . . gene_id "MSTRG.19815"; transcript_id "MSTRG.19815.1"; exon_number "1"; scaffold_1394 StringTie exon 115899 116314 1000 . . gene_id "MSTRG.19816"; transcript_id "MSTRG.19816.1"; exon_number "1"; scaffold_1394 StringTie exon 193877 194453 1000 . . gene_id "MSTRG.19823"; transcript_id "MSTRG.19823.1"; exon_number "1"; scaffold_13946 StringTie exon 7120 7481 1000 . . gene_id "MSTRG.19828"; transcript_id "MSTRG.19828.1"; exon_number "1"; scaffold_1395 StringTie exon 172823 173119 1000 . . gene_id "MSTRG.19851"; transcript_id "MSTRG.19851.1"; exon_number "1"; scaffold_1396 StringTie exon 119765 120386 1000 . . gene_id "MSTRG.19884"; transcript_id "MSTRG.19884.1"; exon_number "1"; scaffold_1397 StringTie exon 92911 93216 1000 + . gene_id "MSTRG.19919"; transcript_id "MSTRG.19919.1"; exon_number "1"; scaffold_1397 StringTie exon 93733 93783 1000 + . gene_id "MSTRG.19919"; transcript_id "MSTRG.19919.1"; exon_number "2"; scaffold_1397 StringTie exon 146880 147344 1000 . . gene_id "MSTRG.19927"; transcript_id "MSTRG.19927.1"; exon_number "1"; scaffold_1397 StringTie exon 161278 161395 1000 - . gene_id "MSTRG.19933"; transcript_id "MSTRG.19933.1"; exon_number "1"; scaffold_1397 StringTie exon 161468 161578 1000 - . gene_id "MSTRG.19933"; transcript_id "MSTRG.19933.1"; exon_number "2"; scaffold_1397 StringTie exon 212009 212516 1000 . . gene_id "MSTRG.19939"; transcript_id "MSTRG.19939.1"; exon_number "1"; scaffold_1397 StringTie exon 227591 228045 1000 + . gene_id "MSTRG.19945"; transcript_id "MSTRG.19945.2"; exon_number "1"; scaffold_1397 StringTie exon 230348 230497 1000 + . gene_id "MSTRG.19945"; transcript_id "MSTRG.19945.2"; exon_number "2"; scaffold_1397 StringTie exon 230802 230924 1000 + . gene_id "MSTRG.19945"; transcript_id "MSTRG.19945.2"; exon_number "3"; scaffold_1397 StringTie exon 231190 231376 1000 + . gene_id "MSTRG.19945"; transcript_id "MSTRG.19945.2"; exon_number "4"; scaffold_1397 StringTie exon 232026 232126 1000 + . gene_id "MSTRG.19945"; transcript_id "MSTRG.19945.2"; exon_number "5"; scaffold_1397 StringTie exon 232220 232283 1000 + . gene_id "MSTRG.19945"; transcript_id "MSTRG.19945.2"; exon_number "6"; scaffold_1397 StringTie exon 232402 233097 1000 + . gene_id "MSTRG.19945"; transcript_id "MSTRG.19945.2"; exon_number "7"; scaffold_1399 StringTie exon 215118 215492 1000 . . gene_id "MSTRG.19994"; transcript_id "MSTRG.19994.1"; exon_number "1"; scaffold_1399 StringTie exon 217190 217518 1000 - . gene_id "MSTRG.19995"; transcript_id "MSTRG.19995.1"; exon_number "1"; scaffold_13991 StringTie exon 24 306 1000 . . gene_id "MSTRG.20000"; transcript_id "MSTRG.20000.1"; exon_number "1"; scaffold_14 StringTie exon 148657 149137 1000 . . gene_id "MSTRG.20025"; transcript_id "MSTRG.20025.1"; exon_number "1"; scaffold_14 StringTie exon 152743 152947 1000 . . gene_id "MSTRG.20026"; transcript_id "MSTRG.20026.1"; exon_number "1"; scaffold_14 StringTie exon 182351 182425 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "1"; scaffold_14 StringTie exon 189378 189505 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "2"; scaffold_14 StringTie exon 192045 192168 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "3"; scaffold_14 StringTie exon 192493 192651 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "4"; scaffold_14 StringTie exon 192733 192850 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "5"; scaffold_14 StringTie exon 192945 193030 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "6"; scaffold_14 StringTie exon 193140 193260 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "7"; scaffold_14 StringTie exon 193451 193695 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "8"; scaffold_14 StringTie exon 193854 193947 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "9"; scaffold_14 StringTie exon 194042 194169 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "10"; scaffold_14 StringTie exon 194363 194425 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "11"; scaffold_14 StringTie exon 194516 194611 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "12"; scaffold_14 StringTie exon 194720 194855 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "13"; scaffold_14 StringTie exon 195261 195428 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "14"; scaffold_14 StringTie exon 202834 203670 1000 + . gene_id "MSTRG.20033"; transcript_id "MSTRG.20033.1"; exon_number "15"; scaffold_14 StringTie exon 247853 248142 1000 . . gene_id "MSTRG.20037"; transcript_id "MSTRG.20037.1"; exon_number "1"; scaffold_140 StringTie exon 426535 426768 1000 + . gene_id "MSTRG.20082"; transcript_id "MSTRG.20082.1"; exon_number "1"; scaffold_140 StringTie exon 437053 437216 1000 + . gene_id "MSTRG.20082"; transcript_id "MSTRG.20082.1"; exon_number "2"; scaffold_140 StringTie exon 437497 437635 1000 + . gene_id "MSTRG.20082"; transcript_id "MSTRG.20082.1"; exon_number "3"; scaffold_140 StringTie exon 452662 452810 1000 + . gene_id "MSTRG.20083"; transcript_id "MSTRG.20083.1"; exon_number "1"; scaffold_140 StringTie exon 455215 455277 1000 + . gene_id "MSTRG.20083"; transcript_id "MSTRG.20083.1"; exon_number "2"; scaffold_140 StringTie exon 455510 455691 1000 + . gene_id "MSTRG.20083"; transcript_id "MSTRG.20083.1"; exon_number "3"; scaffold_140 StringTie exon 456381 456444 1000 + . gene_id "MSTRG.20083"; transcript_id "MSTRG.20083.1"; exon_number "4"; scaffold_140 StringTie exon 457559 457588 1000 + . gene_id "MSTRG.20083"; transcript_id "MSTRG.20083.1"; exon_number "5"; scaffold_140 StringTie exon 458147 458226 1000 + . gene_id "MSTRG.20083"; transcript_id "MSTRG.20083.1"; exon_number "6"; scaffold_140 StringTie exon 459348 459401 1000 + . gene_id "MSTRG.20083"; transcript_id "MSTRG.20083.1"; exon_number "7"; scaffold_140 StringTie exon 655689 657358 1000 . . gene_id "MSTRG.20093"; transcript_id "MSTRG.20093.1"; exon_number "1"; scaffold_140 StringTie exon 780428 780659 1000 - . gene_id "MSTRG.20109"; transcript_id "MSTRG.20109.1"; exon_number "1"; scaffold_140 StringTie exon 780784 780862 1000 - . gene_id "MSTRG.20109"; transcript_id "MSTRG.20109.1"; exon_number "2"; scaffold_140 StringTie exon 780946 780970 1000 - . gene_id "MSTRG.20109"; transcript_id "MSTRG.20109.1"; exon_number "3"; scaffold_140 StringTie exon 847941 848126 1000 - . gene_id "MSTRG.20118"; transcript_id "MSTRG.20118.1"; exon_number "1"; scaffold_140 StringTie exon 848761 848863 1000 - . gene_id "MSTRG.20118"; transcript_id "MSTRG.20118.1"; exon_number "2"; scaffold_140 StringTie exon 896068 896293 1000 . . gene_id "MSTRG.20123"; transcript_id "MSTRG.20123.1"; exon_number "1"; scaffold_140 StringTie exon 914764 914826 1000 + . gene_id "MSTRG.20127"; transcript_id "MSTRG.20127.1"; exon_number "1"; scaffold_140 StringTie exon 915157 915319 1000 + . gene_id "MSTRG.20127"; transcript_id "MSTRG.20127.1"; exon_number "2"; scaffold_140 StringTie exon 983240 983477 1000 . . gene_id "MSTRG.20134"; transcript_id "MSTRG.20134.1"; exon_number "1"; scaffold_140 StringTie exon 1492618 1492689 1000 - . gene_id "MSTRG.20170"; transcript_id "MSTRG.20170.3"; exon_number "1"; scaffold_140 StringTie exon 1494033 1494164 1000 - . gene_id "MSTRG.20170"; transcript_id "MSTRG.20170.3"; exon_number "2"; scaffold_140 StringTie exon 1495200 1495304 1000 - . gene_id "MSTRG.20170"; transcript_id "MSTRG.20170.3"; exon_number "3"; scaffold_140 StringTie exon 1495466 1495635 1000 - . gene_id "MSTRG.20170"; transcript_id "MSTRG.20170.3"; exon_number "4"; scaffold_140 StringTie exon 1497832 1498233 1000 - . gene_id "MSTRG.20170"; transcript_id "MSTRG.20170.3"; exon_number "5"; scaffold_140 StringTie exon 1508944 1508981 1000 - . gene_id "MSTRG.20172"; transcript_id "MSTRG.20172.1"; exon_number "1"; scaffold_140 StringTie exon 1509177 1509341 1000 - . gene_id "MSTRG.20172"; transcript_id "MSTRG.20172.1"; exon_number "2"; scaffold_1400 StringTie exon 27228 27449 1000 . . gene_id "MSTRG.20175"; transcript_id "MSTRG.20175.1"; exon_number "1"; scaffold_1401 StringTie exon 227654 227853 1000 . . gene_id "MSTRG.20208"; transcript_id "MSTRG.20208.1"; exon_number "1"; scaffold_14015 StringTie exon 6462 7417 1000 . . gene_id "MSTRG.20215"; transcript_id "MSTRG.20215.1"; exon_number "1"; scaffold_1402 StringTie exon 38831 39048 1000 . . gene_id "MSTRG.20220"; transcript_id "MSTRG.20220.1"; exon_number "1"; scaffold_1402 StringTie exon 42429 42706 1000 . . gene_id "MSTRG.20221"; transcript_id "MSTRG.20221.1"; exon_number "1"; scaffold_1402 StringTie exon 63413 63703 1000 . . gene_id "MSTRG.20224"; transcript_id "MSTRG.20224.1"; exon_number "1"; scaffold_1403 StringTie exon 14347 14761 1000 . . gene_id "MSTRG.20249"; transcript_id "MSTRG.20249.1"; exon_number "1"; scaffold_1403 StringTie exon 66308 66561 1000 . . gene_id "MSTRG.20253"; transcript_id "MSTRG.20253.1"; exon_number "1"; scaffold_14030 StringTie exon 4003 4242 1000 . . gene_id "MSTRG.20259"; transcript_id "MSTRG.20259.1"; exon_number "1"; scaffold_14031 StringTie exon 9126 9341 1000 . . gene_id "MSTRG.20261"; transcript_id "MSTRG.20261.1"; exon_number "1"; scaffold_1404 StringTie exon 178846 179109 1000 . . gene_id "MSTRG.20278"; transcript_id "MSTRG.20278.1"; exon_number "1"; scaffold_14040 StringTie exon 808 1020 1000 . . gene_id "MSTRG.20282"; transcript_id "MSTRG.20282.1"; exon_number "1"; scaffold_1406 StringTie exon 34376 35885 1000 - . gene_id "MSTRG.20323"; transcript_id "MSTRG.20323.1"; exon_number "1"; scaffold_1406 StringTie exon 36111 36169 1000 - . gene_id "MSTRG.20323"; transcript_id "MSTRG.20323.1"; exon_number "2"; scaffold_1406 StringTie exon 36283 36603 1000 - . gene_id "MSTRG.20323"; transcript_id "MSTRG.20323.1"; exon_number "3"; scaffold_1406 StringTie exon 40226 40279 1000 - . gene_id "MSTRG.20323"; transcript_id "MSTRG.20323.1"; exon_number "4"; scaffold_1406 StringTie exon 125339 125738 1000 . . gene_id "MSTRG.20324"; transcript_id "MSTRG.20324.1"; exon_number "1"; scaffold_1406 StringTie exon 194612 197820 1000 . . gene_id "MSTRG.20331"; transcript_id "MSTRG.20331.1"; exon_number "1"; scaffold_14079 StringTie exon 8725 8808 1000 - . gene_id "MSTRG.20372"; transcript_id "MSTRG.20372.1"; exon_number "1"; scaffold_14079 StringTie exon 8898 8975 1000 - . gene_id "MSTRG.20372"; transcript_id "MSTRG.20372.1"; exon_number "2"; scaffold_14079 StringTie exon 9186 9260 1000 - . gene_id "MSTRG.20372"; transcript_id "MSTRG.20372.1"; exon_number "3"; scaffold_14079 StringTie exon 9901 10009 1000 - . gene_id "MSTRG.20372"; transcript_id "MSTRG.20372.1"; exon_number "4"; scaffold_1408 StringTie exon 171504 171639 1000 - . gene_id "MSTRG.20385"; transcript_id "MSTRG.20385.1"; exon_number "1"; scaffold_1408 StringTie exon 177703 178053 1000 - . gene_id "MSTRG.20385"; transcript_id "MSTRG.20385.1"; exon_number "2"; scaffold_1409 StringTie exon 53894 54102 1000 . . gene_id "MSTRG.20398"; transcript_id "MSTRG.20398.1"; exon_number "1"; scaffold_141 StringTie exon 140588 140608 1000 - . gene_id "MSTRG.20435"; transcript_id "MSTRG.20435.1"; exon_number "1"; scaffold_141 StringTie exon 141241 141355 1000 - . gene_id "MSTRG.20435"; transcript_id "MSTRG.20435.1"; exon_number "2"; scaffold_141 StringTie exon 143835 144003 1000 - . gene_id "MSTRG.20435"; transcript_id "MSTRG.20435.1"; exon_number "3"; scaffold_141 StringTie exon 553388 553402 1000 - . gene_id "MSTRG.20453"; transcript_id "MSTRG.20453.1"; exon_number "1"; scaffold_141 StringTie exon 553874 554185 1000 - . gene_id "MSTRG.20453"; transcript_id "MSTRG.20453.1"; exon_number "2"; scaffold_141 StringTie exon 1012300 1013793 1000 . . gene_id "MSTRG.20479"; transcript_id "MSTRG.20479.1"; exon_number "1"; scaffold_141 StringTie exon 1221450 1221911 1000 . . gene_id "MSTRG.20493"; transcript_id "MSTRG.20493.1"; exon_number "1"; scaffold_141 StringTie exon 1227502 1227815 1000 . . gene_id "MSTRG.20495"; transcript_id "MSTRG.20495.1"; exon_number "1"; scaffold_141 StringTie exon 1271500 1272063 1000 . . gene_id "MSTRG.20503"; transcript_id "MSTRG.20503.1"; exon_number "1"; scaffold_1410 StringTie exon 54651 54785 1000 + . gene_id "MSTRG.20515"; transcript_id "MSTRG.20515.1"; exon_number "1"; scaffold_1410 StringTie exon 55047 55141 1000 + . gene_id "MSTRG.20515"; transcript_id "MSTRG.20515.1"; exon_number "2"; scaffold_1410 StringTie exon 67978 68196 1000 . . gene_id "MSTRG.20520"; transcript_id "MSTRG.20520.1"; exon_number "1"; scaffold_1410 StringTie exon 180711 181135 1000 - . gene_id "MSTRG.20525"; transcript_id "MSTRG.20525.1"; exon_number "1"; scaffold_1410 StringTie exon 185594 185627 1000 - . gene_id "MSTRG.20525"; transcript_id "MSTRG.20525.1"; exon_number "2"; scaffold_14101 StringTie exon 2021 2291 1000 . . gene_id "MSTRG.20532"; transcript_id "MSTRG.20532.1"; exon_number "1"; scaffold_14104 StringTie exon 5083 5162 1000 + . gene_id "MSTRG.20535"; transcript_id "MSTRG.20535.1"; exon_number "1"; scaffold_14104 StringTie exon 5272 5397 1000 + . gene_id "MSTRG.20535"; transcript_id "MSTRG.20535.1"; exon_number "2"; scaffold_14104 StringTie exon 5541 5711 1000 + . gene_id "MSTRG.20535"; transcript_id "MSTRG.20535.1"; exon_number "3"; scaffold_14104 StringTie exon 5996 6100 1000 + . gene_id "MSTRG.20535"; transcript_id "MSTRG.20535.1"; exon_number "4"; scaffold_14104 StringTie exon 6196 6291 1000 + . gene_id "MSTRG.20535"; transcript_id "MSTRG.20535.1"; exon_number "5"; scaffold_14104 StringTie exon 7666 7765 1000 + . gene_id "MSTRG.20535"; transcript_id "MSTRG.20535.1"; exon_number "6"; scaffold_1412 StringTie exon 191494 191758 1000 . . gene_id "MSTRG.20572"; transcript_id "MSTRG.20572.1"; exon_number "1"; scaffold_1412 StringTie exon 193038 193239 1000 . . gene_id "MSTRG.20573"; transcript_id "MSTRG.20573.1"; exon_number "1"; scaffold_14122 StringTie exon 10316 10544 1000 . . gene_id "MSTRG.20582"; transcript_id "MSTRG.20582.1"; exon_number "1"; scaffold_1413 StringTie exon 176774 177060 1000 . . gene_id "MSTRG.20599"; transcript_id "MSTRG.20599.1"; exon_number "1"; scaffold_1415 StringTie exon 55053 55549 1000 . . gene_id "MSTRG.20650"; transcript_id "MSTRG.20650.1"; exon_number "1"; scaffold_1415 StringTie exon 132940 133211 1000 . . gene_id "MSTRG.20657"; transcript_id "MSTRG.20657.1"; exon_number "1"; scaffold_1416 StringTie exon 187971 188322 1000 - . gene_id "MSTRG.20679"; transcript_id "MSTRG.20679.1"; exon_number "1"; scaffold_1416 StringTie exon 188532 188660 1000 - . gene_id "MSTRG.20679"; transcript_id "MSTRG.20679.1"; exon_number "2"; scaffold_1416 StringTie exon 188878 188991 1000 - . gene_id "MSTRG.20679"; transcript_id "MSTRG.20679.1"; exon_number "3"; scaffold_1416 StringTie exon 189166 189340 1000 - . gene_id "MSTRG.20679"; transcript_id "MSTRG.20679.1"; exon_number "4"; scaffold_1416 StringTie exon 189539 189681 1000 - . gene_id "MSTRG.20679"; transcript_id "MSTRG.20679.1"; exon_number "5"; scaffold_1416 StringTie exon 192672 192855 1000 - . gene_id "MSTRG.20679"; transcript_id "MSTRG.20679.1"; exon_number "6"; scaffold_1416 StringTie exon 193028 193122 1000 - . gene_id "MSTRG.20679"; transcript_id "MSTRG.20679.1"; exon_number "7"; scaffold_1416 StringTie exon 194137 194319 1000 - . gene_id "MSTRG.20679"; transcript_id "MSTRG.20679.1"; exon_number "8"; scaffold_14160 StringTie exon 6770 7949 1000 . . gene_id "MSTRG.20688"; transcript_id "MSTRG.20688.1"; exon_number "1"; scaffold_1417 StringTie exon 193412 193687 1000 . . gene_id "MSTRG.20709"; transcript_id "MSTRG.20709.1"; exon_number "1"; scaffold_14172 StringTie exon 3773 4074 1000 + . gene_id "MSTRG.20715"; transcript_id "MSTRG.20715.1"; exon_number "1"; scaffold_14172 StringTie exon 5099 6473 1000 + . gene_id "MSTRG.20715"; transcript_id "MSTRG.20715.1"; exon_number "2"; scaffold_14173 StringTie exon 157 371 1000 . . gene_id "MSTRG.20716"; transcript_id "MSTRG.20716.1"; exon_number "1"; scaffold_14173 StringTie exon 2467 2492 1000 - . gene_id "MSTRG.20717"; transcript_id "MSTRG.20717.1"; exon_number "1"; scaffold_14173 StringTie exon 2713 2942 1000 - . gene_id "MSTRG.20717"; transcript_id "MSTRG.20717.1"; exon_number "2"; scaffold_14185 StringTie exon 13303 13738 1000 . . gene_id "MSTRG.20751"; transcript_id "MSTRG.20751.1"; exon_number "1"; scaffold_1419 StringTie exon 192399 192420 1000 - . gene_id "MSTRG.20769"; transcript_id "MSTRG.20769.1"; exon_number "1"; scaffold_1419 StringTie exon 204610 204710 1000 - . gene_id "MSTRG.20769"; transcript_id "MSTRG.20769.1"; exon_number "2"; scaffold_1419 StringTie exon 204795 204910 1000 - . gene_id "MSTRG.20769"; transcript_id "MSTRG.20769.1"; exon_number "3"; scaffold_14192 StringTie exon 10800 11095 1000 . . gene_id "MSTRG.20777"; transcript_id "MSTRG.20777.1"; exon_number "1"; scaffold_14194 StringTie exon 4774 5075 1000 . . gene_id "MSTRG.20779"; transcript_id "MSTRG.20779.1"; exon_number "1"; scaffold_14198 StringTie exon 10078 10389 1000 . . gene_id "MSTRG.20785"; transcript_id "MSTRG.20785.1"; exon_number "1"; scaffold_142 StringTie exon 253590 253864 1000 . . gene_id "MSTRG.20798"; transcript_id "MSTRG.20798.1"; exon_number "1"; scaffold_1420 StringTie exon 104261 104493 1000 . . gene_id "MSTRG.20871"; transcript_id "MSTRG.20871.1"; exon_number "1"; scaffold_14201 StringTie exon 11180 11476 1000 . . gene_id "MSTRG.20877"; transcript_id "MSTRG.20877.1"; exon_number "1"; scaffold_1421 StringTie exon 59922 60267 1000 - . gene_id "MSTRG.20889"; transcript_id "MSTRG.20889.1"; exon_number "1"; scaffold_1421 StringTie exon 185631 185843 1000 . . gene_id "MSTRG.20898"; transcript_id "MSTRG.20898.1"; exon_number "1"; scaffold_14210 StringTie exon 12973 13277 1000 . . gene_id "MSTRG.20906"; transcript_id "MSTRG.20906.1"; exon_number "1"; scaffold_14221 StringTie exon 6714 6811 1000 - . gene_id "MSTRG.20934"; transcript_id "MSTRG.20934.1"; exon_number "1"; scaffold_14221 StringTie exon 10004 10135 1000 - . gene_id "MSTRG.20934"; transcript_id "MSTRG.20934.1"; exon_number "2"; scaffold_14226 StringTie exon 3656 3891 1000 . . gene_id "MSTRG.20937"; transcript_id "MSTRG.20937.1"; exon_number "1"; scaffold_1426 StringTie exon 225024 225287 1000 . . gene_id "MSTRG.21030"; transcript_id "MSTRG.21030.1"; exon_number "1"; scaffold_14261 StringTie exon 6259 6472 1000 . . gene_id "MSTRG.21031"; transcript_id "MSTRG.21031.1"; exon_number "1"; scaffold_14268 StringTie exon 4705 5392 1000 - . gene_id "MSTRG.21035"; transcript_id "MSTRG.21035.1"; exon_number "1"; scaffold_14269 StringTie exon 113 1670 1000 . . gene_id "MSTRG.21036"; transcript_id "MSTRG.21036.1"; exon_number "1"; scaffold_1427 StringTie exon 193610 194087 1000 . . gene_id "MSTRG.21053"; transcript_id "MSTRG.21053.1"; exon_number "1"; scaffold_1427 StringTie exon 204708 205118 1000 + . gene_id "MSTRG.21056"; transcript_id "MSTRG.21056.1"; exon_number "1"; scaffold_1427 StringTie exon 205477 205572 1000 + . gene_id "MSTRG.21056"; transcript_id "MSTRG.21056.1"; exon_number "2"; scaffold_1427 StringTie exon 205940 206142 1000 + . gene_id "MSTRG.21056"; transcript_id "MSTRG.21056.1"; exon_number "3"; scaffold_1429 StringTie exon 7356 7439 1000 - . gene_id "MSTRG.21098"; transcript_id "MSTRG.21098.1"; exon_number "1"; scaffold_1429 StringTie exon 8687 8836 1000 - . gene_id "MSTRG.21098"; transcript_id "MSTRG.21098.1"; exon_number "2"; scaffold_1429 StringTie exon 132143 133033 1000 . . gene_id "MSTRG.21111"; transcript_id "MSTRG.21111.1"; exon_number "1"; scaffold_1429 StringTie exon 142948 143225 1000 . . gene_id "MSTRG.21114"; transcript_id "MSTRG.21114.1"; exon_number "1"; scaffold_143 StringTie exon 196386 197733 1000 . . gene_id "MSTRG.21146"; transcript_id "MSTRG.21146.1"; exon_number "1"; scaffold_143 StringTie exon 422377 422609 1000 . . gene_id "MSTRG.21167"; transcript_id "MSTRG.21167.1"; exon_number "1"; scaffold_143 StringTie exon 428074 428363 1000 . . gene_id "MSTRG.21169"; transcript_id "MSTRG.21169.1"; exon_number "1"; scaffold_1431 StringTie exon 198663 198894 1000 + . gene_id "MSTRG.21282"; transcript_id "MSTRG.21282.1"; exon_number "1"; scaffold_1431 StringTie exon 205015 205113 1000 + . gene_id "MSTRG.21282"; transcript_id "MSTRG.21282.1"; exon_number "2"; scaffold_1431 StringTie exon 206202 206344 1000 + . gene_id "MSTRG.21282"; transcript_id "MSTRG.21282.1"; exon_number "3"; scaffold_14311 StringTie exon 8783 8992 1000 . . gene_id "MSTRG.21293"; transcript_id "MSTRG.21293.1"; exon_number "1"; scaffold_14315 StringTie exon 47 335 1000 . . gene_id "MSTRG.21298"; transcript_id "MSTRG.21298.1"; exon_number "1"; scaffold_14325 StringTie exon 624 900 1000 . . gene_id "MSTRG.21318"; transcript_id "MSTRG.21318.1"; exon_number "1"; scaffold_1433 StringTie exon 27902 27914 1000 - . gene_id "MSTRG.21329"; transcript_id "MSTRG.21329.1"; exon_number "1"; scaffold_1433 StringTie exon 28267 28487 1000 - . gene_id "MSTRG.21329"; transcript_id "MSTRG.21329.1"; exon_number "2"; scaffold_1433 StringTie exon 123058 123231 1000 + . gene_id "MSTRG.21336"; transcript_id "MSTRG.21336.1"; exon_number "1"; scaffold_1433 StringTie exon 123824 123885 1000 + . gene_id "MSTRG.21336"; transcript_id "MSTRG.21336.1"; exon_number "2"; scaffold_1433 StringTie exon 146995 147173 1000 - . gene_id "MSTRG.21340"; transcript_id "MSTRG.21340.1"; exon_number "1"; scaffold_1433 StringTie exon 147484 147548 1000 - . gene_id "MSTRG.21340"; transcript_id "MSTRG.21340.1"; exon_number "2"; scaffold_14332 StringTie exon 8259 8687 1000 . . gene_id "MSTRG.21348"; transcript_id "MSTRG.21348.1"; exon_number "1"; scaffold_1436 StringTie exon 165296 165502 1000 . . gene_id "MSTRG.21414"; transcript_id "MSTRG.21414.1"; exon_number "1"; scaffold_14362 StringTie exon 12843 13181 1000 . . gene_id "MSTRG.21430"; transcript_id "MSTRG.21430.1"; exon_number "1"; scaffold_14370 StringTie exon 10280 11073 1000 . . gene_id "MSTRG.21456"; transcript_id "MSTRG.21456.1"; exon_number "1"; scaffold_14381 StringTie exon 11946 12354 1000 . . gene_id "MSTRG.21481"; transcript_id "MSTRG.21481.1"; exon_number "1"; scaffold_14382 StringTie exon 2910 3261 1000 . . gene_id "MSTRG.21482"; transcript_id "MSTRG.21482.1"; exon_number "1"; scaffold_144 StringTie exon 125417 125771 1000 . . gene_id "MSTRG.21536"; transcript_id "MSTRG.21536.1"; exon_number "1"; scaffold_144 StringTie exon 449336 449856 1000 . . gene_id "MSTRG.21556"; transcript_id "MSTRG.21556.1"; exon_number "1"; scaffold_144 StringTie exon 451190 451519 1000 . . gene_id "MSTRG.21557"; transcript_id "MSTRG.21557.1"; exon_number "1"; scaffold_144 StringTie exon 855013 855317 1000 . . gene_id "MSTRG.21579"; transcript_id "MSTRG.21579.1"; exon_number "1"; scaffold_144 StringTie exon 974436 974689 1000 . . gene_id "MSTRG.21585"; transcript_id "MSTRG.21585.1"; exon_number "1"; scaffold_1440 StringTie exon 24905 25203 1000 . . gene_id "MSTRG.21601"; transcript_id "MSTRG.21601.1"; exon_number "1"; scaffold_1440 StringTie exon 154241 154325 1000 + . gene_id "MSTRG.21606"; transcript_id "MSTRG.21606.1"; exon_number "1"; scaffold_1440 StringTie exon 156472 156577 1000 + . gene_id "MSTRG.21606"; transcript_id "MSTRG.21606.1"; exon_number "2"; scaffold_1440 StringTie exon 156736 156895 1000 + . gene_id "MSTRG.21606"; transcript_id "MSTRG.21606.1"; exon_number "3"; scaffold_1440 StringTie exon 157052 157139 1000 + . gene_id "MSTRG.21606"; transcript_id "MSTRG.21606.1"; exon_number "4"; scaffold_1440 StringTie exon 160031 160068 1000 + . gene_id "MSTRG.21606"; transcript_id "MSTRG.21606.1"; exon_number "5"; scaffold_1440 StringTie exon 169125 169341 1000 . . gene_id "MSTRG.21607"; transcript_id "MSTRG.21607.1"; exon_number "1"; scaffold_1440 StringTie exon 205898 206009 1000 + . gene_id "MSTRG.21612"; transcript_id "MSTRG.21612.1"; exon_number "1"; scaffold_1440 StringTie exon 208110 208218 1000 + . gene_id "MSTRG.21612"; transcript_id "MSTRG.21612.1"; exon_number "2"; scaffold_1441 StringTie exon 38052 38304 1000 . . gene_id "MSTRG.21627"; transcript_id "MSTRG.21627.1"; exon_number "1"; scaffold_1442 StringTie exon 10425 15609 1000 . . gene_id "MSTRG.21651"; transcript_id "MSTRG.21651.1"; exon_number "1"; scaffold_14432 StringTie exon 12145 12422 1000 . . gene_id "MSTRG.21703"; transcript_id "MSTRG.21703.1"; exon_number "1"; scaffold_1444 StringTie exon 213 1034 1000 - . gene_id "MSTRG.21709"; transcript_id "MSTRG.21709.1"; exon_number "1"; scaffold_1444 StringTie exon 1378 1435 1000 - . gene_id "MSTRG.21709"; transcript_id "MSTRG.21709.1"; exon_number "2"; scaffold_1444 StringTie exon 1549 1611 1000 - . gene_id "MSTRG.21709"; transcript_id "MSTRG.21709.1"; exon_number "3"; scaffold_1444 StringTie exon 53537 53791 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "1"; scaffold_1444 StringTie exon 54575 54607 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "2"; scaffold_1444 StringTie exon 54712 54774 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "3"; scaffold_1444 StringTie exon 54897 54998 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "4"; scaffold_1444 StringTie exon 55387 55444 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "5"; scaffold_1444 StringTie exon 55648 55745 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "6"; scaffold_1444 StringTie exon 55886 55954 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "7"; scaffold_1444 StringTie exon 56052 56119 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "8"; scaffold_1444 StringTie exon 56241 56295 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "9"; scaffold_1444 StringTie exon 56375 56461 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "10"; scaffold_1444 StringTie exon 56902 57850 1000 + . gene_id "MSTRG.21714"; transcript_id "MSTRG.21714.1"; exon_number "11"; scaffold_1444 StringTie exon 74033 74333 1000 . . gene_id "MSTRG.21717"; transcript_id "MSTRG.21717.1"; exon_number "1"; scaffold_1444 StringTie exon 139287 139520 1000 . . gene_id "MSTRG.21725"; transcript_id "MSTRG.21725.1"; exon_number "1"; scaffold_1444 StringTie exon 232861 233061 1000 . . gene_id "MSTRG.21733"; transcript_id "MSTRG.21733.1"; exon_number "1"; scaffold_14441 StringTie exon 1923 2368 1000 . . gene_id "MSTRG.21736"; transcript_id "MSTRG.21736.1"; exon_number "1"; scaffold_14444 StringTie exon 6485 6811 1000 . . gene_id "MSTRG.21738"; transcript_id "MSTRG.21738.1"; exon_number "1"; scaffold_14445 StringTie exon 6337 6677 1000 . . gene_id "MSTRG.21741"; transcript_id "MSTRG.21741.1"; exon_number "1"; scaffold_14447 StringTie exon 11749 12091 1000 . . gene_id "MSTRG.21747"; transcript_id "MSTRG.21747.1"; exon_number "1"; scaffold_14453 StringTie exon 4210 4237 1000 + . gene_id "MSTRG.21765"; transcript_id "MSTRG.21765.1"; exon_number "1"; scaffold_14453 StringTie exon 4799 4950 1000 + . gene_id "MSTRG.21765"; transcript_id "MSTRG.21765.1"; exon_number "2"; scaffold_14453 StringTie exon 6119 6197 1000 + . gene_id "MSTRG.21765"; transcript_id "MSTRG.21765.1"; exon_number "3"; scaffold_14453 StringTie exon 9053 9103 1000 + . gene_id "MSTRG.21765"; transcript_id "MSTRG.21765.1"; exon_number "4"; scaffold_14453 StringTie exon 9343 9465 1000 + . gene_id "MSTRG.21765"; transcript_id "MSTRG.21765.1"; exon_number "5"; scaffold_14453 StringTie exon 10252 10350 1000 + . gene_id "MSTRG.21765"; transcript_id "MSTRG.21765.1"; exon_number "6"; scaffold_14454 StringTie exon 8017 8794 1000 . . gene_id "MSTRG.21768"; transcript_id "MSTRG.21768.1"; exon_number "1"; scaffold_1446 StringTie exon 36525 36876 1000 . . gene_id "MSTRG.21775"; transcript_id "MSTRG.21775.1"; exon_number "1"; scaffold_1446 StringTie exon 182608 183012 1000 . . gene_id "MSTRG.21789"; transcript_id "MSTRG.21789.1"; exon_number "1"; scaffold_14469 StringTie exon 11278 11650 1000 + . gene_id "MSTRG.21810"; transcript_id "MSTRG.21810.1"; exon_number "1"; scaffold_14469 StringTie exon 11833 11882 1000 + . gene_id "MSTRG.21810"; transcript_id "MSTRG.21810.1"; exon_number "2"; scaffold_14474 StringTie exon 12634 12908 1000 . . gene_id "MSTRG.21837"; transcript_id "MSTRG.21837.1"; exon_number "1"; scaffold_14475 StringTie exon 1412 1828 1000 . . gene_id "MSTRG.21838"; transcript_id "MSTRG.21838.1"; exon_number "1"; scaffold_14477 StringTie exon 2 451 1000 . . gene_id "MSTRG.21841"; transcript_id "MSTRG.21841.1"; exon_number "1"; scaffold_1449 StringTie exon 31694 31953 1000 . . gene_id "MSTRG.21868"; transcript_id "MSTRG.21868.1"; exon_number "1"; scaffold_1449 StringTie exon 115199 115594 1000 + . gene_id "MSTRG.21875"; transcript_id "MSTRG.21875.1"; exon_number "1"; scaffold_1449 StringTie exon 131920 132150 1000 + . gene_id "MSTRG.21875"; transcript_id "MSTRG.21875.1"; exon_number "2"; scaffold_1449 StringTie exon 134560 134616 1000 + . gene_id "MSTRG.21875"; transcript_id "MSTRG.21875.1"; exon_number "3"; scaffold_1449 StringTie exon 134714 134822 1000 + . gene_id "MSTRG.21875"; transcript_id "MSTRG.21875.1"; exon_number "4"; scaffold_1449 StringTie exon 134968 135014 1000 + . gene_id "MSTRG.21875"; transcript_id "MSTRG.21875.1"; exon_number "5"; scaffold_1449 StringTie exon 178079 178206 1000 - . gene_id "MSTRG.21881"; transcript_id "MSTRG.21881.1"; exon_number "1"; scaffold_1449 StringTie exon 178500 178572 1000 - . gene_id "MSTRG.21881"; transcript_id "MSTRG.21881.1"; exon_number "2"; scaffold_1449 StringTie exon 178833 178899 1000 - . gene_id "MSTRG.21881"; transcript_id "MSTRG.21881.1"; exon_number "3"; scaffold_1449 StringTie exon 185969 186005 1000 - . gene_id "MSTRG.21881"; transcript_id "MSTRG.21881.1"; exon_number "4"; scaffold_1449 StringTie exon 195508 195709 1000 . . gene_id "MSTRG.21882"; transcript_id "MSTRG.21882.1"; exon_number "1"; scaffold_14492 StringTie exon 2879 3107 1000 . . gene_id "MSTRG.21893"; transcript_id "MSTRG.21893.1"; exon_number "1"; scaffold_145 StringTie exon 50745 51012 1000 . . gene_id "MSTRG.21906"; transcript_id "MSTRG.21906.1"; exon_number "1"; scaffold_145 StringTie exon 188021 188968 1000 - . gene_id "MSTRG.21913"; transcript_id "MSTRG.21913.1"; exon_number "1"; scaffold_145 StringTie exon 189175 189296 1000 - . gene_id "MSTRG.21913"; transcript_id "MSTRG.21913.1"; exon_number "2"; scaffold_145 StringTie exon 189460 189613 1000 - . gene_id "MSTRG.21913"; transcript_id "MSTRG.21913.1"; exon_number "3"; scaffold_145 StringTie exon 192003 192099 1000 - . gene_id "MSTRG.21913"; transcript_id "MSTRG.21913.1"; exon_number "4"; scaffold_145 StringTie exon 193041 193484 1000 - . gene_id "MSTRG.21913"; transcript_id "MSTRG.21913.1"; exon_number "5"; scaffold_145 StringTie exon 337843 337976 1000 + . gene_id "MSTRG.21925"; transcript_id "MSTRG.21925.1"; exon_number "1"; scaffold_145 StringTie exon 338426 338537 1000 + . gene_id "MSTRG.21925"; transcript_id "MSTRG.21925.1"; exon_number "2"; scaffold_145 StringTie exon 338667 338753 1000 + . gene_id "MSTRG.21925"; transcript_id "MSTRG.21925.1"; exon_number "3"; scaffold_145 StringTie exon 339173 339275 1000 + . gene_id "MSTRG.21925"; transcript_id "MSTRG.21925.1"; exon_number "4"; scaffold_145 StringTie exon 339701 339899 1000 + . gene_id "MSTRG.21925"; transcript_id "MSTRG.21925.1"; exon_number "5"; scaffold_145 StringTie exon 342751 343001 1000 . . gene_id "MSTRG.21927"; transcript_id "MSTRG.21927.1"; exon_number "1"; scaffold_145 StringTie exon 595349 595604 1000 . . gene_id "MSTRG.21934"; transcript_id "MSTRG.21934.1"; exon_number "1"; scaffold_145 StringTie exon 608218 608694 1000 . . gene_id "MSTRG.21940"; transcript_id "MSTRG.21940.1"; exon_number "1"; scaffold_145 StringTie exon 686773 687489 1000 . . gene_id "MSTRG.21944"; transcript_id "MSTRG.21944.1"; exon_number "1"; scaffold_145 StringTie exon 1024662 1025827 1000 . . gene_id "MSTRG.21979"; transcript_id "MSTRG.21979.1"; exon_number "1"; scaffold_145 StringTie exon 1147969 1148211 1000 . . gene_id "MSTRG.21988"; transcript_id "MSTRG.21988.1"; exon_number "1"; scaffold_145 StringTie exon 1160465 1160627 1000 + . gene_id "MSTRG.21994"; transcript_id "MSTRG.21994.1"; exon_number "1"; scaffold_145 StringTie exon 1160886 1160935 1000 + . gene_id "MSTRG.21994"; transcript_id "MSTRG.21994.1"; exon_number "2"; scaffold_145 StringTie exon 1161122 1161256 1000 + . gene_id "MSTRG.21994"; transcript_id "MSTRG.21994.1"; exon_number "3"; scaffold_145 StringTie exon 1163843 1164065 1000 + . gene_id "MSTRG.21994"; transcript_id "MSTRG.21994.1"; exon_number "4"; scaffold_145 StringTie exon 1334213 1334525 1000 . . gene_id "MSTRG.22009"; transcript_id "MSTRG.22009.1"; exon_number "1"; scaffold_1450 StringTie exon 226282 226481 1000 + . gene_id "MSTRG.22046"; transcript_id "MSTRG.22046.1"; exon_number "1"; scaffold_1450 StringTie exon 226657 226683 1000 + . gene_id "MSTRG.22046"; transcript_id "MSTRG.22046.1"; exon_number "2"; scaffold_14514 StringTie exon 11637 11659 1000 + . gene_id "MSTRG.22075"; transcript_id "MSTRG.22075.1"; exon_number "1"; scaffold_14514 StringTie exon 12550 12643 1000 + . gene_id "MSTRG.22075"; transcript_id "MSTRG.22075.1"; exon_number "2"; scaffold_14514 StringTie exon 12923 13050 1000 + . gene_id "MSTRG.22075"; transcript_id "MSTRG.22075.1"; exon_number "3"; scaffold_1452 StringTie exon 26061 26096 1000 + . gene_id "MSTRG.22082"; transcript_id "MSTRG.22082.1"; exon_number "1"; scaffold_1452 StringTie exon 34363 34461 1000 + . gene_id "MSTRG.22082"; transcript_id "MSTRG.22082.1"; exon_number "2"; scaffold_1452 StringTie exon 39218 39334 1000 + . gene_id "MSTRG.22082"; transcript_id "MSTRG.22082.1"; exon_number "3"; scaffold_1452 StringTie exon 39782 40010 1000 + . gene_id "MSTRG.22082"; transcript_id "MSTRG.22082.1"; exon_number "4"; scaffold_1452 StringTie exon 40402 40445 1000 + . gene_id "MSTRG.22082"; transcript_id "MSTRG.22082.1"; exon_number "5"; scaffold_1452 StringTie exon 106458 106765 1000 . . gene_id "MSTRG.22087"; transcript_id "MSTRG.22087.1"; exon_number "1"; scaffold_1452 StringTie exon 212607 213219 1000 - . gene_id "MSTRG.22095"; transcript_id "MSTRG.22095.1"; exon_number "1"; scaffold_14524 StringTie exon 10765 10791 1000 + . gene_id "MSTRG.22102"; transcript_id "MSTRG.22102.1"; exon_number "1"; scaffold_14524 StringTie exon 10964 11172 1000 + . gene_id "MSTRG.22102"; transcript_id "MSTRG.22102.1"; exon_number "2"; scaffold_14524 StringTie exon 11464 11536 1000 + . gene_id "MSTRG.22102"; transcript_id "MSTRG.22102.1"; exon_number "3"; scaffold_1453 StringTie exon 1628 2145 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "1"; scaffold_1453 StringTie exon 2409 2492 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "2"; scaffold_1453 StringTie exon 2652 2738 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "3"; scaffold_1453 StringTie exon 3111 3208 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "4"; scaffold_1453 StringTie exon 3616 3814 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "5"; scaffold_1453 StringTie exon 4793 4990 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "6"; scaffold_1453 StringTie exon 5223 5450 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "7"; scaffold_1453 StringTie exon 5760 6062 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "8"; scaffold_1453 StringTie exon 7622 7929 1000 - . gene_id "MSTRG.22107"; transcript_id "MSTRG.22107.1"; exon_number "9"; scaffold_1453 StringTie exon 100673 100866 1000 + . gene_id "MSTRG.22118"; transcript_id "MSTRG.22118.1"; exon_number "1"; scaffold_1453 StringTie exon 100981 101085 1000 + . gene_id "MSTRG.22118"; transcript_id "MSTRG.22118.1"; exon_number "2"; scaffold_14548 StringTie exon 3230 3527 1000 . . gene_id "MSTRG.22152"; transcript_id "MSTRG.22152.1"; exon_number "1"; scaffold_1455 StringTie exon 95570 95795 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "1"; scaffold_1455 StringTie exon 95932 95951 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "2"; scaffold_1455 StringTie exon 96142 96255 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "3"; scaffold_1455 StringTie exon 97215 97262 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "4"; scaffold_1455 StringTie exon 97620 97649 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "5"; scaffold_1455 StringTie exon 97852 97890 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "6"; scaffold_1455 StringTie exon 98050 98082 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "7"; scaffold_1455 StringTie exon 98342 98380 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "8"; scaffold_1455 StringTie exon 98610 98678 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "9"; scaffold_1455 StringTie exon 99019 99327 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "10"; scaffold_1455 StringTie exon 99569 99847 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "11"; scaffold_1455 StringTie exon 99946 100203 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "12"; scaffold_1455 StringTie exon 101602 101618 1000 - . gene_id "MSTRG.22162"; transcript_id "MSTRG.22162.2"; exon_number "13"; scaffold_1455 StringTie exon 139697 139922 1000 . . gene_id "MSTRG.22164"; transcript_id "MSTRG.22164.1"; exon_number "1"; scaffold_1456 StringTie exon 121800 121897 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "1"; scaffold_1456 StringTie exon 122176 122280 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "2"; scaffold_1456 StringTie exon 122480 122584 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "3"; scaffold_1456 StringTie exon 122694 122798 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "4"; scaffold_1456 StringTie exon 123213 123314 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "5"; scaffold_1456 StringTie exon 125082 125183 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "6"; scaffold_1456 StringTie exon 125402 125509 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "7"; scaffold_1456 StringTie exon 125831 125935 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "8"; scaffold_1456 StringTie exon 126147 126251 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "9"; scaffold_1456 StringTie exon 126487 126588 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "10"; scaffold_1456 StringTie exon 126722 126826 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "11"; scaffold_1456 StringTie exon 127116 127226 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "12"; scaffold_1456 StringTie exon 127390 127500 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "13"; scaffold_1456 StringTie exon 127689 127790 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "14"; scaffold_1456 StringTie exon 128114 128218 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "15"; scaffold_1456 StringTie exon 139699 139809 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "16"; scaffold_1456 StringTie exon 140067 140173 1000 + . gene_id "MSTRG.22192"; transcript_id "MSTRG.22192.1"; exon_number "17"; scaffold_1456 StringTie exon 168899 169290 1000 . . gene_id "MSTRG.22200"; transcript_id "MSTRG.22200.1"; exon_number "1"; scaffold_1456 StringTie exon 204643 204851 1000 . . gene_id "MSTRG.22202"; transcript_id "MSTRG.22202.1"; exon_number "1"; scaffold_14566 StringTie exon 4182 4308 1000 - . gene_id "MSTRG.22211"; transcript_id "MSTRG.22211.1"; exon_number "1"; scaffold_14566 StringTie exon 4796 4910 1000 - . gene_id "MSTRG.22211"; transcript_id "MSTRG.22211.1"; exon_number "2"; scaffold_14566 StringTie exon 5352 5588 1000 - . gene_id "MSTRG.22211"; transcript_id "MSTRG.22211.1"; exon_number "3"; scaffold_14566 StringTie exon 7159 7201 1000 - . gene_id "MSTRG.22211"; transcript_id "MSTRG.22211.1"; exon_number "4"; scaffold_14568 StringTie exon 8410 8739 1000 . . gene_id "MSTRG.22212"; transcript_id "MSTRG.22212.1"; exon_number "1"; scaffold_14569 StringTie exon 1 297 1000 + . gene_id "MSTRG.22213"; transcript_id "MSTRG.22213.1"; exon_number "1"; scaffold_1457 StringTie exon 20723 20864 1000 - . gene_id "MSTRG.22220"; transcript_id "MSTRG.22220.1"; exon_number "1"; scaffold_1457 StringTie exon 20994 21068 1000 - . gene_id "MSTRG.22220"; transcript_id "MSTRG.22220.1"; exon_number "2"; scaffold_1457 StringTie exon 21170 21270 1000 - . gene_id "MSTRG.22220"; transcript_id "MSTRG.22220.1"; exon_number "3"; scaffold_1457 StringTie exon 23036 23116 1000 - . gene_id "MSTRG.22220"; transcript_id "MSTRG.22220.1"; exon_number "4"; scaffold_1457 StringTie exon 77562 78321 1000 - . gene_id "MSTRG.22223"; transcript_id "MSTRG.22223.1"; exon_number "1"; scaffold_1457 StringTie exon 86243 86508 1000 - . gene_id "MSTRG.22223"; transcript_id "MSTRG.22223.1"; exon_number "2"; scaffold_1457 StringTie exon 213189 213413 1000 . . gene_id "MSTRG.22237"; transcript_id "MSTRG.22237.1"; exon_number "1"; scaffold_146 StringTie exon 20658 20971 1000 . . gene_id "MSTRG.22308"; transcript_id "MSTRG.22308.1"; exon_number "1"; scaffold_146 StringTie exon 751226 751511 1000 . . gene_id "MSTRG.22361"; transcript_id "MSTRG.22361.1"; exon_number "1"; scaffold_146 StringTie exon 1081209 1081285 1000 - . gene_id "MSTRG.22389"; transcript_id "MSTRG.22389.3"; exon_number "1"; scaffold_146 StringTie exon 1083195 1083218 1000 - . gene_id "MSTRG.22389"; transcript_id "MSTRG.22389.3"; exon_number "2"; scaffold_146 StringTie exon 1084353 1084677 1000 - . gene_id "MSTRG.22389"; transcript_id "MSTRG.22389.3"; exon_number "3"; scaffold_146 StringTie exon 1161639 1161866 1000 . . gene_id "MSTRG.22392"; transcript_id "MSTRG.22392.1"; exon_number "1"; scaffold_146 StringTie exon 1451947 1452155 1000 . . gene_id "MSTRG.22405"; transcript_id "MSTRG.22405.1"; exon_number "1"; scaffold_1460 StringTie exon 116129 116331 1000 . . gene_id "MSTRG.22411"; transcript_id "MSTRG.22411.1"; exon_number "1"; scaffold_14605 StringTie exon 5342 5905 1000 . . gene_id "MSTRG.22422"; transcript_id "MSTRG.22422.1"; exon_number "1"; scaffold_1461 StringTie exon 84123 84143 1000 + . gene_id "MSTRG.22436"; transcript_id "MSTRG.22436.1"; exon_number "1"; scaffold_1461 StringTie exon 84271 84315 1000 + . gene_id "MSTRG.22436"; transcript_id "MSTRG.22436.1"; exon_number "2"; scaffold_1461 StringTie exon 84457 84555 1000 + . gene_id "MSTRG.22436"; transcript_id "MSTRG.22436.1"; exon_number "3"; scaffold_1461 StringTie exon 84741 84794 1000 + . gene_id "MSTRG.22436"; transcript_id "MSTRG.22436.1"; exon_number "4"; scaffold_1461 StringTie exon 84917 84970 1000 + . gene_id "MSTRG.22436"; transcript_id "MSTRG.22436.1"; exon_number "5"; scaffold_1461 StringTie exon 212395 212654 1000 . . gene_id "MSTRG.22446"; transcript_id "MSTRG.22446.1"; exon_number "1"; scaffold_14611 StringTie exon 562 1066 1000 . . gene_id "MSTRG.22449"; transcript_id "MSTRG.22449.1"; exon_number "1"; scaffold_14616 StringTie exon 2715 2989 1000 . . gene_id "MSTRG.22455"; transcript_id "MSTRG.22455.1"; exon_number "1"; scaffold_1462 StringTie exon 43987 44105 1000 - . gene_id "MSTRG.22468"; transcript_id "MSTRG.22468.1"; exon_number "1"; scaffold_1462 StringTie exon 44607 44709 1000 - . gene_id "MSTRG.22468"; transcript_id "MSTRG.22468.1"; exon_number "2"; scaffold_14623 StringTie exon 3603 4456 1000 . . gene_id "MSTRG.22479"; transcript_id "MSTRG.22479.1"; exon_number "1"; scaffold_1463 StringTie exon 59035 59285 1000 . . gene_id "MSTRG.22489"; transcript_id "MSTRG.22489.1"; exon_number "1"; scaffold_1463 StringTie exon 176385 176395 1000 - . gene_id "MSTRG.22503"; transcript_id "MSTRG.22503.2"; exon_number "1"; scaffold_1463 StringTie exon 178704 178963 1000 - . gene_id "MSTRG.22503"; transcript_id "MSTRG.22503.2"; exon_number "2"; scaffold_14630 StringTie exon 10366 11036 1000 . . gene_id "MSTRG.22504"; transcript_id "MSTRG.22504.1"; exon_number "1"; scaffold_1464 StringTie exon 55719 55806 1000 - . gene_id "MSTRG.22518"; transcript_id "MSTRG.22518.1"; exon_number "1"; scaffold_1464 StringTie exon 56168 56296 1000 - . gene_id "MSTRG.22518"; transcript_id "MSTRG.22518.1"; exon_number "2"; scaffold_1464 StringTie exon 56677 56862 1000 - . gene_id "MSTRG.22518"; transcript_id "MSTRG.22518.1"; exon_number "3"; scaffold_1464 StringTie exon 57287 57411 1000 - . gene_id "MSTRG.22518"; transcript_id "MSTRG.22518.1"; exon_number "4"; scaffold_1464 StringTie exon 57592 57688 1000 - . gene_id "MSTRG.22518"; transcript_id "MSTRG.22518.1"; exon_number "5"; scaffold_1464 StringTie exon 57860 57913 1000 - . gene_id "MSTRG.22518"; transcript_id "MSTRG.22518.1"; exon_number "6"; scaffold_1464 StringTie exon 58212 58273 1000 - . gene_id "MSTRG.22518"; transcript_id "MSTRG.22518.1"; exon_number "7"; scaffold_1465 StringTie exon 150184 150417 1000 . . gene_id "MSTRG.22550"; transcript_id "MSTRG.22550.1"; exon_number "1"; scaffold_1465 StringTie exon 154432 154670 1000 . . gene_id "MSTRG.22551"; transcript_id "MSTRG.22551.1"; exon_number "1"; scaffold_1466 StringTie exon 19678 19880 1000 . . gene_id "MSTRG.22563"; transcript_id "MSTRG.22563.1"; exon_number "1"; scaffold_1466 StringTie exon 201963 202065 1000 + . gene_id "MSTRG.22584"; transcript_id "MSTRG.22584.1"; exon_number "1"; scaffold_1466 StringTie exon 202271 202528 1000 + . gene_id "MSTRG.22584"; transcript_id "MSTRG.22584.1"; exon_number "2"; scaffold_1466 StringTie exon 215673 215974 1000 + . gene_id "MSTRG.22587"; transcript_id "MSTRG.22587.1"; exon_number "1"; scaffold_14667 StringTie exon 8687 8888 1000 . . gene_id "MSTRG.22594"; transcript_id "MSTRG.22594.1"; exon_number "1"; scaffold_1467 StringTie exon 37496 38385 1000 . . gene_id "MSTRG.22607"; transcript_id "MSTRG.22607.1"; exon_number "1"; scaffold_1467 StringTie exon 119317 119617 1000 + . gene_id "MSTRG.22619"; transcript_id "MSTRG.22619.1"; exon_number "1"; scaffold_1467 StringTie exon 120648 120799 1000 + . gene_id "MSTRG.22619"; transcript_id "MSTRG.22619.1"; exon_number "2"; scaffold_1467 StringTie exon 120896 121047 1000 + . gene_id "MSTRG.22619"; transcript_id "MSTRG.22619.1"; exon_number "3"; scaffold_1467 StringTie exon 121181 121443 1000 + . gene_id "MSTRG.22619"; transcript_id "MSTRG.22619.1"; exon_number "4"; scaffold_1467 StringTie exon 121760 121918 1000 + . gene_id "MSTRG.22619"; transcript_id "MSTRG.22619.1"; exon_number "5"; scaffold_1467 StringTie exon 122014 122053 1000 + . gene_id "MSTRG.22619"; transcript_id "MSTRG.22619.1"; exon_number "6"; scaffold_1467 StringTie exon 125661 126175 1000 + . gene_id "MSTRG.22622"; transcript_id "MSTRG.22622.1"; exon_number "1"; scaffold_1467 StringTie exon 126344 126506 1000 + . gene_id "MSTRG.22622"; transcript_id "MSTRG.22622.1"; exon_number "2"; scaffold_1467 StringTie exon 128391 128480 1000 + . gene_id "MSTRG.22622"; transcript_id "MSTRG.22622.1"; exon_number "3"; scaffold_1467 StringTie exon 130084 130380 1000 + . gene_id "MSTRG.22622"; transcript_id "MSTRG.22622.1"; exon_number "4"; scaffold_1467 StringTie exon 178497 178780 1000 + . gene_id "MSTRG.22631"; transcript_id "MSTRG.22631.1"; exon_number "1"; scaffold_1467 StringTie exon 180745 181133 1000 + . gene_id "MSTRG.22631"; transcript_id "MSTRG.22631.1"; exon_number "2"; scaffold_1467 StringTie exon 195865 196021 1000 + . gene_id "MSTRG.22631"; transcript_id "MSTRG.22631.1"; exon_number "3"; scaffold_1467 StringTie exon 196472 196597 1000 + . gene_id "MSTRG.22631"; transcript_id "MSTRG.22631.1"; exon_number "4"; scaffold_1467 StringTie exon 196876 197049 1000 + . gene_id "MSTRG.22631"; transcript_id "MSTRG.22631.1"; exon_number "5"; scaffold_1467 StringTie exon 197270 197395 1000 + . gene_id "MSTRG.22631"; transcript_id "MSTRG.22631.1"; exon_number "6"; scaffold_1467 StringTie exon 197583 197803 1000 + . gene_id "MSTRG.22631"; transcript_id "MSTRG.22631.1"; exon_number "7"; scaffold_1467 StringTie exon 197948 198062 1000 + . gene_id "MSTRG.22631"; transcript_id "MSTRG.22631.1"; exon_number "8"; scaffold_1467 StringTie exon 198197 198317 1000 + . gene_id "MSTRG.22632"; transcript_id "MSTRG.22632.1"; exon_number "1"; scaffold_1467 StringTie exon 198530 198637 1000 + . gene_id "MSTRG.22632"; transcript_id "MSTRG.22632.1"; exon_number "2"; scaffold_1467 StringTie exon 198828 198947 1000 + . gene_id "MSTRG.22632"; transcript_id "MSTRG.22632.1"; exon_number "3"; scaffold_1467 StringTie exon 199153 199209 1000 + . gene_id "MSTRG.22632"; transcript_id "MSTRG.22632.1"; exon_number "4"; scaffold_1467 StringTie exon 199538 199605 1000 + . gene_id "MSTRG.22632"; transcript_id "MSTRG.22632.1"; exon_number "5"; scaffold_1467 StringTie exon 199687 199741 1000 + . gene_id "MSTRG.22633"; transcript_id "MSTRG.22633.1"; exon_number "1"; scaffold_1467 StringTie exon 199985 202196 1000 + . gene_id "MSTRG.22633"; transcript_id "MSTRG.22633.1"; exon_number "2"; scaffold_1468 StringTie exon 41757 42348 1000 . . gene_id "MSTRG.22650"; transcript_id "MSTRG.22650.1"; exon_number "1"; scaffold_1468 StringTie exon 154575 155407 1000 . . gene_id "MSTRG.22654"; transcript_id "MSTRG.22654.1"; exon_number "1"; scaffold_147 StringTie exon 835667 835897 1000 . . gene_id "MSTRG.22744"; transcript_id "MSTRG.22744.1"; exon_number "1"; scaffold_147 StringTie exon 934870 935106 1000 . . gene_id "MSTRG.22755"; transcript_id "MSTRG.22755.1"; exon_number "1"; scaffold_1470 StringTie exon 61779 62041 1000 . . gene_id "MSTRG.22809"; transcript_id "MSTRG.22809.1"; exon_number "1"; scaffold_1470 StringTie exon 139620 139829 1000 . . gene_id "MSTRG.22815"; transcript_id "MSTRG.22815.1"; exon_number "1"; scaffold_14705 StringTie exon 10737 10987 1000 . . gene_id "MSTRG.22823"; transcript_id "MSTRG.22823.1"; exon_number "1"; scaffold_14708 StringTie exon 10880 11134 1000 . . gene_id "MSTRG.22826"; transcript_id "MSTRG.22826.1"; exon_number "1"; scaffold_14709 StringTie exon 12439 12639 1000 . . gene_id "MSTRG.22829"; transcript_id "MSTRG.22829.1"; exon_number "1"; scaffold_1471 StringTie exon 99519 99663 1000 + . gene_id "MSTRG.22842"; transcript_id "MSTRG.22842.1"; exon_number "1"; scaffold_1471 StringTie exon 100102 100221 1000 + . gene_id "MSTRG.22842"; transcript_id "MSTRG.22842.1"; exon_number "2"; scaffold_1472 StringTie exon 17038 17215 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "1"; scaffold_1472 StringTie exon 17453 17752 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "2"; scaffold_1472 StringTie exon 18063 18184 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "3"; scaffold_1472 StringTie exon 18403 18871 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "4"; scaffold_1472 StringTie exon 19014 19226 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "5"; scaffold_1472 StringTie exon 19469 19548 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "6"; scaffold_1472 StringTie exon 22235 22349 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "7"; scaffold_1472 StringTie exon 22581 22682 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "8"; scaffold_1472 StringTie exon 22930 23105 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "9"; scaffold_1472 StringTie exon 24114 24156 1000 - . gene_id "MSTRG.22853"; transcript_id "MSTRG.22853.2"; exon_number "10"; scaffold_1472 StringTie exon 226807 226853 1000 + . gene_id "MSTRG.22862"; transcript_id "MSTRG.22862.1"; exon_number "1"; scaffold_1472 StringTie exon 227041 227220 1000 + . gene_id "MSTRG.22862"; transcript_id "MSTRG.22862.1"; exon_number "2"; scaffold_1474 StringTie exon 23059 23185 1000 - . gene_id "MSTRG.22906"; transcript_id "MSTRG.22906.1"; exon_number "1"; scaffold_1474 StringTie exon 23782 23916 1000 - . gene_id "MSTRG.22906"; transcript_id "MSTRG.22906.1"; exon_number "2"; scaffold_1474 StringTie exon 24011 24175 1000 - . gene_id "MSTRG.22906"; transcript_id "MSTRG.22906.1"; exon_number "3"; scaffold_1474 StringTie exon 24330 24438 1000 - . gene_id "MSTRG.22906"; transcript_id "MSTRG.22906.1"; exon_number "4"; scaffold_1474 StringTie exon 40332 40374 1000 - . gene_id "MSTRG.22913"; transcript_id "MSTRG.22913.1"; exon_number "1"; scaffold_1474 StringTie exon 40724 40830 1000 - . gene_id "MSTRG.22913"; transcript_id "MSTRG.22913.1"; exon_number "2"; scaffold_1474 StringTie exon 43398 43506 1000 - . gene_id "MSTRG.22913"; transcript_id "MSTRG.22913.1"; exon_number "3"; scaffold_1474 StringTie exon 45575 45662 1000 - . gene_id "MSTRG.22913"; transcript_id "MSTRG.22913.1"; exon_number "4"; scaffold_1474 StringTie exon 46038 46096 1000 - . gene_id "MSTRG.22913"; transcript_id "MSTRG.22913.1"; exon_number "5"; scaffold_1474 StringTie exon 48840 48944 1000 - . gene_id "MSTRG.22913"; transcript_id "MSTRG.22913.1"; exon_number "6"; scaffold_1474 StringTie exon 49117 49250 1000 - . gene_id "MSTRG.22913"; transcript_id "MSTRG.22913.1"; exon_number "7"; scaffold_1474 StringTie exon 50363 50480 1000 - . gene_id "MSTRG.22913"; transcript_id "MSTRG.22913.1"; exon_number "8"; scaffold_14752 StringTie exon 4159 4410 1000 . . gene_id "MSTRG.22944"; transcript_id "MSTRG.22944.1"; exon_number "1"; scaffold_14769 StringTie exon 1497 1864 1000 . . gene_id "MSTRG.22976"; transcript_id "MSTRG.22976.1"; exon_number "1"; scaffold_14770 StringTie exon 226 504 1000 . . gene_id "MSTRG.22989"; transcript_id "MSTRG.22989.1"; exon_number "1"; scaffold_1479 StringTie exon 43867 44127 1000 . . gene_id "MSTRG.23021"; transcript_id "MSTRG.23021.1"; exon_number "1"; scaffold_1479 StringTie exon 142407 142848 1000 . . gene_id "MSTRG.23027"; transcript_id "MSTRG.23027.1"; exon_number "1"; scaffold_14793 StringTie exon 152 366 1000 . . gene_id "MSTRG.23041"; transcript_id "MSTRG.23041.1"; exon_number "1"; scaffold_148 StringTie exon 52269 52594 1000 . . gene_id "MSTRG.23052"; transcript_id "MSTRG.23052.1"; exon_number "1"; scaffold_148 StringTie exon 206742 206867 1000 - . gene_id "MSTRG.23060"; transcript_id "MSTRG.23060.1"; exon_number "1"; scaffold_148 StringTie exon 207178 207286 1000 - . gene_id "MSTRG.23060"; transcript_id "MSTRG.23060.1"; exon_number "2"; scaffold_148 StringTie exon 207456 207474 1000 - . gene_id "MSTRG.23060"; transcript_id "MSTRG.23060.1"; exon_number "3"; scaffold_148 StringTie exon 346461 346696 1000 . . gene_id "MSTRG.23069"; transcript_id "MSTRG.23069.1"; exon_number "1"; scaffold_148 StringTie exon 699182 699344 1000 + . gene_id "MSTRG.23095"; transcript_id "MSTRG.23095.1"; exon_number "1"; scaffold_148 StringTie exon 699759 699820 1000 + . gene_id "MSTRG.23095"; transcript_id "MSTRG.23095.1"; exon_number "2"; scaffold_148 StringTie exon 703695 703790 1000 + . gene_id "MSTRG.23095"; transcript_id "MSTRG.23095.1"; exon_number "3"; scaffold_148 StringTie exon 705028 705485 1000 + . gene_id "MSTRG.23095"; transcript_id "MSTRG.23095.1"; exon_number "4"; scaffold_148 StringTie exon 871384 871635 1000 . . gene_id "MSTRG.23109"; transcript_id "MSTRG.23109.1"; exon_number "1"; scaffold_148 StringTie exon 963662 963731 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "1"; scaffold_148 StringTie exon 964043 964188 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "2"; scaffold_148 StringTie exon 965699 965977 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "3"; scaffold_148 StringTie exon 973515 973655 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "4"; scaffold_148 StringTie exon 973869 973967 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "5"; scaffold_148 StringTie exon 974091 974178 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "6"; scaffold_148 StringTie exon 974349 974483 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "7"; scaffold_148 StringTie exon 974767 974836 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "8"; scaffold_148 StringTie exon 976629 976774 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "9"; scaffold_148 StringTie exon 976912 977118 1000 + . gene_id "MSTRG.23120"; transcript_id "MSTRG.23120.1"; exon_number "10"; scaffold_148 StringTie exon 1018216 1018319 1000 + . gene_id "MSTRG.23125"; transcript_id "MSTRG.23125.1"; exon_number "1"; scaffold_148 StringTie exon 1019494 1019801 1000 + . gene_id "MSTRG.23125"; transcript_id "MSTRG.23125.1"; exon_number "2"; scaffold_148 StringTie exon 1019967 1020045 1000 + . gene_id "MSTRG.23125"; transcript_id "MSTRG.23125.1"; exon_number "3"; scaffold_148 StringTie exon 1050504 1050630 1000 + . gene_id "MSTRG.23130"; transcript_id "MSTRG.23130.1"; exon_number "1"; scaffold_148 StringTie exon 1050787 1051159 1000 + . gene_id "MSTRG.23130"; transcript_id "MSTRG.23130.1"; exon_number "2"; scaffold_148 StringTie exon 1191053 1191478 1000 . . gene_id "MSTRG.23133"; transcript_id "MSTRG.23133.1"; exon_number "1"; scaffold_14812 StringTie exon 6031 6462 1000 . . gene_id "MSTRG.23185"; transcript_id "MSTRG.23185.1"; exon_number "1"; scaffold_1482 StringTie exon 135202 135636 1000 - . gene_id "MSTRG.23199"; transcript_id "MSTRG.23199.1"; exon_number "1"; scaffold_1482 StringTie exon 135719 135845 1000 - . gene_id "MSTRG.23199"; transcript_id "MSTRG.23199.1"; exon_number "2"; scaffold_14821 StringTie exon 2056 2283 1000 . . gene_id "MSTRG.23209"; transcript_id "MSTRG.23209.1"; exon_number "1"; scaffold_14826 StringTie exon 848 1097 1000 . . gene_id "MSTRG.23211"; transcript_id "MSTRG.23211.1"; exon_number "1"; scaffold_1483 StringTie exon 59683 59972 1000 . . gene_id "MSTRG.23218"; transcript_id "MSTRG.23218.1"; exon_number "1"; scaffold_14831 StringTie exon 11885 12122 1000 . . gene_id "MSTRG.23226"; transcript_id "MSTRG.23226.1"; exon_number "1"; scaffold_14855 StringTie exon 840 1048 1000 . . gene_id "MSTRG.23301"; transcript_id "MSTRG.23301.1"; exon_number "1"; scaffold_1486 StringTie exon 90246 90464 1000 . . gene_id "MSTRG.23312"; transcript_id "MSTRG.23312.1"; exon_number "1"; scaffold_14860 StringTie exon 1433 1660 1000 . . gene_id "MSTRG.23318"; transcript_id "MSTRG.23318.1"; exon_number "1"; scaffold_1487 StringTie exon 221576 221798 1000 . . gene_id "MSTRG.23335"; transcript_id "MSTRG.23335.1"; exon_number "1"; scaffold_14876 StringTie exon 10549 11095 1000 - . gene_id "MSTRG.23351"; transcript_id "MSTRG.23351.1"; exon_number "1"; scaffold_14887 StringTie exon 2949 3177 1000 . . gene_id "MSTRG.23379"; transcript_id "MSTRG.23379.1"; exon_number "1"; scaffold_14889 StringTie exon 8789 9799 1000 + . gene_id "MSTRG.23384"; transcript_id "MSTRG.23384.1"; exon_number "1"; scaffold_14891 StringTie exon 3472 3762 1000 . . gene_id "MSTRG.23399"; transcript_id "MSTRG.23399.1"; exon_number "1"; scaffold_149 StringTie exon 24788 25234 1000 . . gene_id "MSTRG.23409"; transcript_id "MSTRG.23409.1"; exon_number "1"; scaffold_149 StringTie exon 32239 32476 1000 . . gene_id "MSTRG.23411"; transcript_id "MSTRG.23411.1"; exon_number "1"; scaffold_149 StringTie exon 134491 135006 1000 . . gene_id "MSTRG.23416"; transcript_id "MSTRG.23416.1"; exon_number "1"; scaffold_149 StringTie exon 175319 175555 1000 . . gene_id "MSTRG.23420"; transcript_id "MSTRG.23420.1"; exon_number "1"; scaffold_149 StringTie exon 286325 286395 1000 - . gene_id "MSTRG.23426"; transcript_id "MSTRG.23426.1"; exon_number "1"; scaffold_149 StringTie exon 286521 286653 1000 - . gene_id "MSTRG.23426"; transcript_id "MSTRG.23426.1"; exon_number "2"; scaffold_149 StringTie exon 287062 287157 1000 - . gene_id "MSTRG.23426"; transcript_id "MSTRG.23426.1"; exon_number "3"; scaffold_149 StringTie exon 288548 288619 1000 - . gene_id "MSTRG.23426"; transcript_id "MSTRG.23426.1"; exon_number "4"; scaffold_149 StringTie exon 700395 700925 1000 - . gene_id "MSTRG.23468"; transcript_id "MSTRG.23468.1"; exon_number "1"; scaffold_149 StringTie exon 701108 701191 1000 - . gene_id "MSTRG.23468"; transcript_id "MSTRG.23468.1"; exon_number "2"; scaffold_149 StringTie exon 717292 717831 1000 . . gene_id "MSTRG.23473"; transcript_id "MSTRG.23473.1"; exon_number "1"; scaffold_149 StringTie exon 719788 719827 1000 - . gene_id "MSTRG.23474"; transcript_id "MSTRG.23474.1"; exon_number "1"; scaffold_149 StringTie exon 719984 720051 1000 - . gene_id "MSTRG.23474"; transcript_id "MSTRG.23474.1"; exon_number "2"; scaffold_149 StringTie exon 720349 720435 1000 - . gene_id "MSTRG.23474"; transcript_id "MSTRG.23474.1"; exon_number "3"; scaffold_149 StringTie exon 721437 721507 1000 - . gene_id "MSTRG.23474"; transcript_id "MSTRG.23474.1"; exon_number "4"; scaffold_149 StringTie exon 721687 721748 1000 - . gene_id "MSTRG.23474"; transcript_id "MSTRG.23474.1"; exon_number "5"; scaffold_149 StringTie exon 721858 721910 1000 - . gene_id "MSTRG.23475"; transcript_id "MSTRG.23475.1"; exon_number "1"; scaffold_149 StringTie exon 722064 722115 1000 - . gene_id "MSTRG.23475"; transcript_id "MSTRG.23475.1"; exon_number "2"; scaffold_149 StringTie exon 722278 722327 1000 - . gene_id "MSTRG.23475"; transcript_id "MSTRG.23475.1"; exon_number "3"; scaffold_149 StringTie exon 722480 722538 1000 - . gene_id "MSTRG.23475"; transcript_id "MSTRG.23475.1"; exon_number "4"; scaffold_149 StringTie exon 722721 722795 1000 - . gene_id "MSTRG.23475"; transcript_id "MSTRG.23475.1"; exon_number "5"; scaffold_149 StringTie exon 722973 723039 1000 - . gene_id "MSTRG.23475"; transcript_id "MSTRG.23475.1"; exon_number "6"; scaffold_149 StringTie exon 723209 723266 1000 - . gene_id "MSTRG.23475"; transcript_id "MSTRG.23475.1"; exon_number "7"; scaffold_149 StringTie exon 723917 724088 1000 - . gene_id "MSTRG.23475"; transcript_id "MSTRG.23475.1"; exon_number "8"; scaffold_149 StringTie exon 728655 728877 1000 . . gene_id "MSTRG.23477"; transcript_id "MSTRG.23477.1"; exon_number "1"; scaffold_149 StringTie exon 803678 803769 1000 + . gene_id "MSTRG.23481"; transcript_id "MSTRG.23481.2"; exon_number "1"; scaffold_149 StringTie exon 813866 814070 1000 + . gene_id "MSTRG.23481"; transcript_id "MSTRG.23481.2"; exon_number "2"; scaffold_149 StringTie exon 923330 923590 1000 . . gene_id "MSTRG.23487"; transcript_id "MSTRG.23487.1"; exon_number "1"; scaffold_149 StringTie exon 1375957 1375968 1000 + . gene_id "MSTRG.23526"; transcript_id "MSTRG.23526.1"; exon_number "1"; scaffold_149 StringTie exon 1376066 1376174 1000 + . gene_id "MSTRG.23526"; transcript_id "MSTRG.23526.1"; exon_number "2"; scaffold_149 StringTie exon 1376387 1376474 1000 + . gene_id "MSTRG.23526"; transcript_id "MSTRG.23526.1"; exon_number "3"; scaffold_149 StringTie exon 1376849 1377242 1000 + . gene_id "MSTRG.23526"; transcript_id "MSTRG.23526.1"; exon_number "4"; scaffold_1490 StringTie exon 86784 87000 1000 . . gene_id "MSTRG.23537"; transcript_id "MSTRG.23537.1"; exon_number "1"; scaffold_14907 StringTie exon 6404 6624 1000 . . gene_id "MSTRG.23560"; transcript_id "MSTRG.23560.1"; exon_number "1"; scaffold_1493 StringTie exon 56317 56805 1000 . . gene_id "MSTRG.23611"; transcript_id "MSTRG.23611.1"; exon_number "1"; scaffold_1493 StringTie exon 140275 140505 1000 . . gene_id "MSTRG.23614"; transcript_id "MSTRG.23614.1"; exon_number "1"; scaffold_1493 StringTie exon 151836 152049 1000 . . gene_id "MSTRG.23617"; transcript_id "MSTRG.23617.1"; exon_number "1"; scaffold_1493 StringTie exon 203432 203716 1000 . . gene_id "MSTRG.23626"; transcript_id "MSTRG.23626.1"; exon_number "1"; scaffold_14933 StringTie exon 2820 3104 1000 . . gene_id "MSTRG.23635"; transcript_id "MSTRG.23635.1"; exon_number "1"; scaffold_1494 StringTie exon 154919 155077 1000 + . gene_id "MSTRG.23658"; transcript_id "MSTRG.23658.1"; exon_number "1"; scaffold_1494 StringTie exon 172078 172235 1000 + . gene_id "MSTRG.23658"; transcript_id "MSTRG.23658.1"; exon_number "2"; scaffold_14948 StringTie exon 3993 4610 1000 + . gene_id "MSTRG.23670"; transcript_id "MSTRG.23670.1"; exon_number "1"; scaffold_14948 StringTie exon 8452 9163 1000 + . gene_id "MSTRG.23670"; transcript_id "MSTRG.23670.1"; exon_number "2"; scaffold_14948 StringTie exon 9587 9686 1000 + . gene_id "MSTRG.23670"; transcript_id "MSTRG.23670.1"; exon_number "3"; scaffold_14948 StringTie exon 10234 10680 1000 + . gene_id "MSTRG.23670"; transcript_id "MSTRG.23670.1"; exon_number "4"; scaffold_14948 StringTie exon 4286 4610 1000 + . gene_id "MSTRG.23670"; transcript_id "MSTRG.23670.2"; exon_number "1"; scaffold_14948 StringTie exon 8452 9163 1000 + . gene_id "MSTRG.23670"; transcript_id "MSTRG.23670.2"; exon_number "2"; scaffold_14948 StringTie exon 9587 9686 1000 + . gene_id "MSTRG.23670"; transcript_id "MSTRG.23670.2"; exon_number "3"; scaffold_14948 StringTie exon 10152 10680 1000 + . gene_id "MSTRG.23670"; transcript_id "MSTRG.23670.2"; exon_number "4"; scaffold_1495 StringTie exon 166451 166804 1000 . . gene_id "MSTRG.23678"; transcript_id "MSTRG.23678.1"; exon_number "1"; scaffold_1497 StringTie exon 140087 140124 1000 + . gene_id "MSTRG.23722"; transcript_id "MSTRG.23722.1"; exon_number "1"; scaffold_1497 StringTie exon 141000 141181 1000 + . gene_id "MSTRG.23722"; transcript_id "MSTRG.23722.1"; exon_number "2"; scaffold_1497 StringTie exon 164019 164240 1000 . . gene_id "MSTRG.23724"; transcript_id "MSTRG.23724.1"; exon_number "1"; scaffold_1497 StringTie exon 219271 219882 1000 . . gene_id "MSTRG.23729"; transcript_id "MSTRG.23729.1"; exon_number "1"; scaffold_14977 StringTie exon 4396 4640 1000 . . gene_id "MSTRG.23739"; transcript_id "MSTRG.23739.1"; exon_number "1"; scaffold_14982 StringTie exon 8652 8917 1000 . . gene_id "MSTRG.23759"; transcript_id "MSTRG.23759.1"; exon_number "1"; scaffold_15 StringTie exon 658 732 1000 - . gene_id "MSTRG.23782"; transcript_id "MSTRG.23782.1"; exon_number "1"; scaffold_15 StringTie exon 809 913 1000 - . gene_id "MSTRG.23782"; transcript_id "MSTRG.23782.1"; exon_number "2"; scaffold_15 StringTie exon 3915 4023 1000 - . gene_id "MSTRG.23782"; transcript_id "MSTRG.23782.1"; exon_number "3"; scaffold_15 StringTie exon 4119 4168 1000 - . gene_id "MSTRG.23782"; transcript_id "MSTRG.23782.1"; exon_number "4"; scaffold_15 StringTie exon 4299 4464 1000 - . gene_id "MSTRG.23782"; transcript_id "MSTRG.23782.1"; exon_number "5"; scaffold_15 StringTie exon 738047 738354 1000 . . gene_id "MSTRG.23820"; transcript_id "MSTRG.23820.1"; exon_number "1"; scaffold_15 StringTie exon 1175636 1177202 1000 . . gene_id "MSTRG.23839"; transcript_id "MSTRG.23839.1"; exon_number "1"; scaffold_15 StringTie exon 1956454 1956853 1000 . . gene_id "MSTRG.23894"; transcript_id "MSTRG.23894.1"; exon_number "1"; scaffold_15 StringTie exon 2074670 2074970 1000 . . gene_id "MSTRG.23901"; transcript_id "MSTRG.23901.1"; exon_number "1"; scaffold_15 StringTie exon 2370043 2370134 1000 - . gene_id "MSTRG.23930"; transcript_id "MSTRG.23930.1"; exon_number "1"; scaffold_15 StringTie exon 2370314 2370390 1000 - . gene_id "MSTRG.23930"; transcript_id "MSTRG.23930.1"; exon_number "2"; scaffold_15 StringTie exon 2370508 2370636 1000 - . gene_id "MSTRG.23930"; transcript_id "MSTRG.23930.1"; exon_number "3"; scaffold_15 StringTie exon 2370723 2370846 1000 - . gene_id "MSTRG.23930"; transcript_id "MSTRG.23930.1"; exon_number "4"; scaffold_15 StringTie exon 2382091 2382451 1000 - . gene_id "MSTRG.23934"; transcript_id "MSTRG.23934.1"; exon_number "1"; scaffold_15 StringTie exon 2385539 2385644 1000 - . gene_id "MSTRG.23934"; transcript_id "MSTRG.23934.1"; exon_number "2"; scaffold_15 StringTie exon 2386084 2386135 1000 - . gene_id "MSTRG.23934"; transcript_id "MSTRG.23934.1"; exon_number "3"; scaffold_15 StringTie exon 2553547 2553755 1000 . . gene_id "MSTRG.23944"; transcript_id "MSTRG.23944.1"; exon_number "1"; scaffold_15 StringTie exon 2790015 2790255 1000 . . gene_id "MSTRG.23959"; transcript_id "MSTRG.23959.1"; exon_number "1"; scaffold_15 StringTie exon 2964229 2964440 1000 . . gene_id "MSTRG.23972"; transcript_id "MSTRG.23972.1"; exon_number "1"; scaffold_150 StringTie exon 100168 100266 1000 - . gene_id "MSTRG.23988"; transcript_id "MSTRG.23988.1"; exon_number "1"; scaffold_150 StringTie exon 100353 100453 1000 - . gene_id "MSTRG.23988"; transcript_id "MSTRG.23988.1"; exon_number "2"; scaffold_150 StringTie exon 100596 100700 1000 - . gene_id "MSTRG.23988"; transcript_id "MSTRG.23988.1"; exon_number "3"; scaffold_150 StringTie exon 100786 100859 1000 - . gene_id "MSTRG.23988"; transcript_id "MSTRG.23988.1"; exon_number "4"; scaffold_150 StringTie exon 101029 101384 1000 - . gene_id "MSTRG.23988"; transcript_id "MSTRG.23988.1"; exon_number "5"; scaffold_150 StringTie exon 145393 145536 1000 + . gene_id "MSTRG.23992"; transcript_id "MSTRG.23992.1"; exon_number "1"; scaffold_150 StringTie exon 146700 146760 1000 + . gene_id "MSTRG.23992"; transcript_id "MSTRG.23992.1"; exon_number "2"; scaffold_150 StringTie exon 147173 147257 1000 + . gene_id "MSTRG.23992"; transcript_id "MSTRG.23992.1"; exon_number "3"; scaffold_150 StringTie exon 148787 148833 1000 + . gene_id "MSTRG.23992"; transcript_id "MSTRG.23992.1"; exon_number "4"; scaffold_150 StringTie exon 149707 149832 1000 + . gene_id "MSTRG.23992"; transcript_id "MSTRG.23992.1"; exon_number "5"; scaffold_150 StringTie exon 258215 258589 1000 . . gene_id "MSTRG.23999"; transcript_id "MSTRG.23999.1"; exon_number "1"; scaffold_150 StringTie exon 543329 543620 1000 . . gene_id "MSTRG.24017"; transcript_id "MSTRG.24017.1"; exon_number "1"; scaffold_150 StringTie exon 569905 570244 1000 + . gene_id "MSTRG.24023"; transcript_id "MSTRG.24023.1"; exon_number "1"; scaffold_150 StringTie exon 570343 570370 1000 + . gene_id "MSTRG.24023"; transcript_id "MSTRG.24023.1"; exon_number "2"; scaffold_150 StringTie exon 625067 625449 1000 . . gene_id "MSTRG.24026"; transcript_id "MSTRG.24026.1"; exon_number "1"; scaffold_150 StringTie exon 648135 648372 1000 . . gene_id "MSTRG.24031"; transcript_id "MSTRG.24031.1"; exon_number "1"; scaffold_150 StringTie exon 887236 888863 1000 . . gene_id "MSTRG.24036"; transcript_id "MSTRG.24036.1"; exon_number "1"; scaffold_150 StringTie exon 973880 973928 1000 + . gene_id "MSTRG.24045"; transcript_id "MSTRG.24045.1"; exon_number "1"; scaffold_150 StringTie exon 974188 974306 1000 + . gene_id "MSTRG.24045"; transcript_id "MSTRG.24045.1"; exon_number "2"; scaffold_150 StringTie exon 974401 974611 1000 + . gene_id "MSTRG.24045"; transcript_id "MSTRG.24045.1"; exon_number "3"; scaffold_150 StringTie exon 974860 974956 1000 + . gene_id "MSTRG.24045"; transcript_id "MSTRG.24045.1"; exon_number "4"; scaffold_150 StringTie exon 1103293 1103515 1000 . . gene_id "MSTRG.24053"; transcript_id "MSTRG.24053.1"; exon_number "1"; scaffold_150 StringTie exon 1163469 1165086 1000 . . gene_id "MSTRG.24063"; transcript_id "MSTRG.24063.1"; exon_number "1"; scaffold_150 StringTie exon 1398451 1398742 1000 . . gene_id "MSTRG.24083"; transcript_id "MSTRG.24083.1"; exon_number "1"; scaffold_150 StringTie exon 1419485 1419802 1000 . . gene_id "MSTRG.24088"; transcript_id "MSTRG.24088.1"; exon_number "1"; scaffold_150 StringTie exon 1456383 1456738 1000 . . gene_id "MSTRG.24095"; transcript_id "MSTRG.24095.1"; exon_number "1"; scaffold_150 StringTie exon 1486717 1486740 1000 - . gene_id "MSTRG.24098"; transcript_id "MSTRG.24098.1"; exon_number "1"; scaffold_150 StringTie exon 1486852 1487226 1000 - . gene_id "MSTRG.24098"; transcript_id "MSTRG.24098.1"; exon_number "2"; scaffold_150 StringTie exon 1487343 1487500 1000 - . gene_id "MSTRG.24098"; transcript_id "MSTRG.24098.1"; exon_number "3"; scaffold_1500 StringTie exon 191589 191808 1000 . . gene_id "MSTRG.24113"; transcript_id "MSTRG.24113.1"; exon_number "1"; scaffold_1500 StringTie exon 217467 217672 1000 . . gene_id "MSTRG.24119"; transcript_id "MSTRG.24119.1"; exon_number "1"; scaffold_1502 StringTie exon 21490 21714 1000 . . gene_id "MSTRG.24157"; transcript_id "MSTRG.24157.1"; exon_number "1"; scaffold_15023 StringTie exon 10413 10744 1000 . . gene_id "MSTRG.24175"; transcript_id "MSTRG.24175.1"; exon_number "1"; scaffold_1503 StringTie exon 30836 31109 1000 - . gene_id "MSTRG.24187"; transcript_id "MSTRG.24187.1"; exon_number "1"; scaffold_1503 StringTie exon 31393 31586 1000 - . gene_id "MSTRG.24187"; transcript_id "MSTRG.24187.1"; exon_number "2"; scaffold_1503 StringTie exon 31908 32112 1000 - . gene_id "MSTRG.24187"; transcript_id "MSTRG.24187.1"; exon_number "3"; scaffold_1503 StringTie exon 32299 32468 1000 - . gene_id "MSTRG.24187"; transcript_id "MSTRG.24187.1"; exon_number "4"; scaffold_1503 StringTie exon 32572 32710 1000 - . gene_id "MSTRG.24187"; transcript_id "MSTRG.24187.1"; exon_number "5"; scaffold_1503 StringTie exon 37102 37172 1000 - . gene_id "MSTRG.24188"; transcript_id "MSTRG.24188.1"; exon_number "1"; scaffold_1503 StringTie exon 38668 38917 1000 - . gene_id "MSTRG.24188"; transcript_id "MSTRG.24188.1"; exon_number "2"; scaffold_1503 StringTie exon 39103 39221 1000 - . gene_id "MSTRG.24188"; transcript_id "MSTRG.24188.1"; exon_number "3"; scaffold_1503 StringTie exon 39422 39623 1000 - . gene_id "MSTRG.24188"; transcript_id "MSTRG.24188.1"; exon_number "4"; scaffold_1503 StringTie exon 40616 40689 1000 - . gene_id "MSTRG.24188"; transcript_id "MSTRG.24188.1"; exon_number "5"; scaffold_1504 StringTie exon 214985 215133 1000 - . gene_id "MSTRG.24229"; transcript_id "MSTRG.24229.1"; exon_number "1"; scaffold_1504 StringTie exon 215899 216068 1000 - . gene_id "MSTRG.24229"; transcript_id "MSTRG.24229.1"; exon_number "2"; scaffold_1504 StringTie exon 216198 216238 1000 - . gene_id "MSTRG.24229"; transcript_id "MSTRG.24229.1"; exon_number "3"; scaffold_1504 StringTie exon 216375 216466 1000 - . gene_id "MSTRG.24229"; transcript_id "MSTRG.24229.1"; exon_number "4"; scaffold_1504 StringTie exon 220135 220231 1000 - . gene_id "MSTRG.24230"; transcript_id "MSTRG.24230.1"; exon_number "1"; scaffold_1504 StringTie exon 220738 220822 1000 - . gene_id "MSTRG.24230"; transcript_id "MSTRG.24230.1"; exon_number "2"; scaffold_1504 StringTie exon 221031 221236 1000 - . gene_id "MSTRG.24230"; transcript_id "MSTRG.24230.1"; exon_number "3"; scaffold_1504 StringTie exon 222206 222281 1000 - . gene_id "MSTRG.24230"; transcript_id "MSTRG.24230.1"; exon_number "4"; scaffold_1505 StringTie exon 162368 162624 1000 - . gene_id "MSTRG.24247"; transcript_id "MSTRG.24247.1"; exon_number "1"; scaffold_1505 StringTie exon 163194 163506 1000 - . gene_id "MSTRG.24247"; transcript_id "MSTRG.24247.1"; exon_number "2"; scaffold_15053 StringTie exon 8887 9870 1000 . . gene_id "MSTRG.24253"; transcript_id "MSTRG.24253.1"; exon_number "1"; scaffold_15056 StringTie exon 1128 1349 1000 . . gene_id "MSTRG.24257"; transcript_id "MSTRG.24257.1"; exon_number "1"; scaffold_15069 StringTie exon 2158 3213 1000 . . gene_id "MSTRG.24278"; transcript_id "MSTRG.24278.1"; exon_number "1"; scaffold_1508 StringTie exon 3072 3381 1000 . . gene_id "MSTRG.24300"; transcript_id "MSTRG.24300.1"; exon_number "1"; scaffold_15086 StringTie exon 9241 9478 1000 . . gene_id "MSTRG.24337"; transcript_id "MSTRG.24337.1"; exon_number "1"; scaffold_1509 StringTie exon 190564 190805 1000 - . gene_id "MSTRG.24346"; transcript_id "MSTRG.24346.1"; exon_number "1"; scaffold_1509 StringTie exon 190849 190912 1000 - . gene_id "MSTRG.24346"; transcript_id "MSTRG.24346.1"; exon_number "2"; scaffold_15091 StringTie exon 2596 3244 1000 . . gene_id "MSTRG.24349"; transcript_id "MSTRG.24349.1"; exon_number "1"; scaffold_151 StringTie exon 180989 181081 1000 - . gene_id "MSTRG.24384"; transcript_id "MSTRG.24384.1"; exon_number "1"; scaffold_151 StringTie exon 181175 181294 1000 - . gene_id "MSTRG.24384"; transcript_id "MSTRG.24384.1"; exon_number "2"; scaffold_151 StringTie exon 181374 181514 1000 - . gene_id "MSTRG.24384"; transcript_id "MSTRG.24384.1"; exon_number "3"; scaffold_151 StringTie exon 181616 181708 1000 - . gene_id "MSTRG.24384"; transcript_id "MSTRG.24384.1"; exon_number "4"; scaffold_151 StringTie exon 223023 223246 1000 . . gene_id "MSTRG.24392"; transcript_id "MSTRG.24392.1"; exon_number "1"; scaffold_151 StringTie exon 254211 254363 1000 + . gene_id "MSTRG.24394"; transcript_id "MSTRG.24394.1"; exon_number "1"; scaffold_151 StringTie exon 254574 255047 1000 + . gene_id "MSTRG.24394"; transcript_id "MSTRG.24394.1"; exon_number "2"; scaffold_151 StringTie exon 1159272 1160061 1000 . . gene_id "MSTRG.24449"; transcript_id "MSTRG.24449.1"; exon_number "1"; scaffold_151 StringTie exon 1287777 1291849 1000 . . gene_id "MSTRG.24457"; transcript_id "MSTRG.24457.1"; exon_number "1"; scaffold_1510 StringTie exon 145238 145445 1000 . . gene_id "MSTRG.24492"; transcript_id "MSTRG.24492.1"; exon_number "1"; scaffold_15107 StringTie exon 4716 4888 1000 - . gene_id "MSTRG.24506"; transcript_id "MSTRG.24506.1"; exon_number "1"; scaffold_15107 StringTie exon 6287 6754 1000 - . gene_id "MSTRG.24506"; transcript_id "MSTRG.24506.1"; exon_number "2"; scaffold_1511 StringTie exon 101088 101129 1000 + . gene_id "MSTRG.24513"; transcript_id "MSTRG.24513.1"; exon_number "1"; scaffold_1511 StringTie exon 101343 101468 1000 + . gene_id "MSTRG.24513"; transcript_id "MSTRG.24513.1"; exon_number "2"; scaffold_1511 StringTie exon 101550 101690 1000 + . gene_id "MSTRG.24513"; transcript_id "MSTRG.24513.1"; exon_number "3"; scaffold_1511 StringTie exon 101972 102052 1000 + . gene_id "MSTRG.24513"; transcript_id "MSTRG.24513.1"; exon_number "4"; scaffold_1511 StringTie exon 179522 179741 1000 . . gene_id "MSTRG.24515"; transcript_id "MSTRG.24515.1"; exon_number "1"; scaffold_1511 StringTie exon 218288 218700 1000 . . gene_id "MSTRG.24517"; transcript_id "MSTRG.24517.1"; exon_number "1"; scaffold_1512 StringTie exon 61320 61519 1000 . . gene_id "MSTRG.24533"; transcript_id "MSTRG.24533.1"; exon_number "1"; scaffold_1513 StringTie exon 2929 3135 1000 . . gene_id "MSTRG.24548"; transcript_id "MSTRG.24548.1"; exon_number "1"; scaffold_15130 StringTie exon 6240 6649 1000 . . gene_id "MSTRG.24558"; transcript_id "MSTRG.24558.1"; exon_number "1"; scaffold_15130 StringTie exon 9552 9765 1000 . . gene_id "MSTRG.24559"; transcript_id "MSTRG.24559.1"; exon_number "1"; scaffold_15140 StringTie exon 599 681 1000 - . gene_id "MSTRG.24572"; transcript_id "MSTRG.24572.1"; exon_number "1"; scaffold_15140 StringTie exon 806 867 1000 - . gene_id "MSTRG.24572"; transcript_id "MSTRG.24572.1"; exon_number "2"; scaffold_15140 StringTie exon 1263 1369 1000 - . gene_id "MSTRG.24572"; transcript_id "MSTRG.24572.1"; exon_number "3"; scaffold_15140 StringTie exon 1821 1867 1000 - . gene_id "MSTRG.24572"; transcript_id "MSTRG.24572.1"; exon_number "4"; scaffold_1515 StringTie exon 72203 76424 1000 . . gene_id "MSTRG.24593"; transcript_id "MSTRG.24593.1"; exon_number "1"; scaffold_1516 StringTie exon 113225 113279 1000 - . gene_id "MSTRG.24631"; transcript_id "MSTRG.24631.3"; exon_number "1"; scaffold_1516 StringTie exon 113950 114046 1000 - . gene_id "MSTRG.24631"; transcript_id "MSTRG.24631.3"; exon_number "2"; scaffold_1516 StringTie exon 118449 118532 1000 - . gene_id "MSTRG.24631"; transcript_id "MSTRG.24631.3"; exon_number "3"; scaffold_15162 StringTie exon 11368 11696 1000 . . gene_id "MSTRG.24640"; transcript_id "MSTRG.24640.1"; exon_number "1"; scaffold_15165 StringTie exon 8976 9325 1000 . . gene_id "MSTRG.24642"; transcript_id "MSTRG.24642.1"; exon_number "1"; scaffold_15169 StringTie exon 2409 2726 1000 + . gene_id "MSTRG.24646"; transcript_id "MSTRG.24646.1"; exon_number "1"; scaffold_15169 StringTie exon 10517 10648 1000 + . gene_id "MSTRG.24646"; transcript_id "MSTRG.24646.1"; exon_number "2"; scaffold_1517 StringTie exon 4410 4614 1000 . . gene_id "MSTRG.24647"; transcript_id "MSTRG.24647.1"; exon_number "1"; scaffold_1517 StringTie exon 219689 220428 1000 . . gene_id "MSTRG.24653"; transcript_id "MSTRG.24653.1"; exon_number "1"; scaffold_1518 StringTie exon 86812 86933 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "1"; scaffold_1518 StringTie exon 90414 90433 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "2"; scaffold_1518 StringTie exon 91012 91089 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "3"; scaffold_1518 StringTie exon 91519 91594 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "4"; scaffold_1518 StringTie exon 92688 92756 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "5"; scaffold_1518 StringTie exon 93193 93268 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "6"; scaffold_1518 StringTie exon 93399 93484 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "7"; scaffold_1518 StringTie exon 93744 93877 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "8"; scaffold_1518 StringTie exon 94396 94654 1000 - . gene_id "MSTRG.24666"; transcript_id "MSTRG.24666.2"; exon_number "9"; scaffold_152 StringTie exon 370239 370463 1000 . . gene_id "MSTRG.24729"; transcript_id "MSTRG.24729.1"; exon_number "1"; scaffold_152 StringTie exon 880460 880707 1000 . . gene_id "MSTRG.24756"; transcript_id "MSTRG.24756.1"; exon_number "1"; scaffold_152 StringTie exon 917074 917289 1000 + . gene_id "MSTRG.24761"; transcript_id "MSTRG.24761.1"; exon_number "1"; scaffold_152 StringTie exon 917414 917458 1000 + . gene_id "MSTRG.24761"; transcript_id "MSTRG.24761.1"; exon_number "2"; scaffold_152 StringTie exon 1030324 1030360 1000 + . gene_id "MSTRG.24772"; transcript_id "MSTRG.24772.1"; exon_number "1"; scaffold_152 StringTie exon 1030675 1030786 1000 + . gene_id "MSTRG.24772"; transcript_id "MSTRG.24772.1"; exon_number "2"; scaffold_152 StringTie exon 1030940 1031020 1000 + . gene_id "MSTRG.24772"; transcript_id "MSTRG.24772.1"; exon_number "3"; scaffold_152 StringTie exon 1077993 1078121 1000 + . gene_id "MSTRG.24775"; transcript_id "MSTRG.24775.1"; exon_number "1"; scaffold_152 StringTie exon 1078394 1078469 1000 + . gene_id "MSTRG.24775"; transcript_id "MSTRG.24775.1"; exon_number "2"; scaffold_152 StringTie exon 1079917 1080027 1000 - . gene_id "MSTRG.24776"; transcript_id "MSTRG.24776.1"; exon_number "1"; scaffold_152 StringTie exon 1080186 1080238 1000 - . gene_id "MSTRG.24776"; transcript_id "MSTRG.24776.1"; exon_number "2"; scaffold_152 StringTie exon 1089807 1089949 1000 - . gene_id "MSTRG.24776"; transcript_id "MSTRG.24776.1"; exon_number "3"; scaffold_152 StringTie exon 1090887 1090950 1000 - . gene_id "MSTRG.24776"; transcript_id "MSTRG.24776.1"; exon_number "4"; scaffold_152 StringTie exon 1383612 1383851 1000 . . gene_id "MSTRG.24792"; transcript_id "MSTRG.24792.1"; exon_number "1"; scaffold_1520 StringTie exon 67777 67986 1000 . . gene_id "MSTRG.24798"; transcript_id "MSTRG.24798.1"; exon_number "1"; scaffold_1520 StringTie exon 178899 179341 1000 . . gene_id "MSTRG.24800"; transcript_id "MSTRG.24800.1"; exon_number "1"; scaffold_1521 StringTie exon 217589 217800 1000 . . gene_id "MSTRG.24820"; transcript_id "MSTRG.24820.1"; exon_number "1"; scaffold_1522 StringTie exon 60213 60494 1000 + . gene_id "MSTRG.24834"; transcript_id "MSTRG.24834.1"; exon_number "1"; scaffold_1522 StringTie exon 60580 60650 1000 + . gene_id "MSTRG.24834"; transcript_id "MSTRG.24834.1"; exon_number "2"; scaffold_1522 StringTie exon 60766 61000 1000 + . gene_id "MSTRG.24834"; transcript_id "MSTRG.24834.1"; exon_number "3"; scaffold_1522 StringTie exon 129378 129693 1000 . . gene_id "MSTRG.24839"; transcript_id "MSTRG.24839.1"; exon_number "1"; scaffold_1523 StringTie exon 162270 162363 1000 - . gene_id "MSTRG.24858"; transcript_id "MSTRG.24858.2"; exon_number "1"; scaffold_1523 StringTie exon 162619 162763 1000 - . gene_id "MSTRG.24858"; transcript_id "MSTRG.24858.2"; exon_number "2"; scaffold_1523 StringTie exon 163814 163882 1000 - . gene_id "MSTRG.24858"; transcript_id "MSTRG.24858.2"; exon_number "3"; scaffold_1523 StringTie exon 200657 200739 1000 + . gene_id "MSTRG.24865"; transcript_id "MSTRG.24865.1"; exon_number "1"; scaffold_1523 StringTie exon 205156 205240 1000 + . gene_id "MSTRG.24865"; transcript_id "MSTRG.24865.1"; exon_number "2"; scaffold_1523 StringTie exon 209364 209395 1000 + . gene_id "MSTRG.24865"; transcript_id "MSTRG.24865.1"; exon_number "3"; scaffold_1523 StringTie exon 210728 210744 1000 + . gene_id "MSTRG.24865"; transcript_id "MSTRG.24865.1"; exon_number "4"; scaffold_15232 StringTie exon 10844 11661 1000 . . gene_id "MSTRG.24869"; transcript_id "MSTRG.24869.1"; exon_number "1"; scaffold_15235 StringTie exon 7184 7390 1000 . . gene_id "MSTRG.24876"; transcript_id "MSTRG.24876.1"; exon_number "1"; scaffold_15241 StringTie exon 5412 5749 1000 . . gene_id "MSTRG.24893"; transcript_id "MSTRG.24893.1"; exon_number "1"; scaffold_1526 StringTie exon 88457 88744 1000 . . gene_id "MSTRG.24942"; transcript_id "MSTRG.24942.1"; exon_number "1"; scaffold_1526 StringTie exon 90640 90943 1000 - . gene_id "MSTRG.24944"; transcript_id "MSTRG.24944.1"; exon_number "1"; scaffold_1526 StringTie exon 94123 94456 1000 . . gene_id "MSTRG.24946"; transcript_id "MSTRG.24946.1"; exon_number "1"; scaffold_1526 StringTie exon 154617 154823 1000 . . gene_id "MSTRG.24950"; transcript_id "MSTRG.24950.1"; exon_number "1"; scaffold_15276 StringTie exon 2481 2735 1000 . . gene_id "MSTRG.24978"; transcript_id "MSTRG.24978.1"; exon_number "1"; scaffold_1529 StringTie exon 11345 11571 1000 . . gene_id "MSTRG.25016"; transcript_id "MSTRG.25016.1"; exon_number "1"; scaffold_1529 StringTie exon 12035 12467 1000 . . gene_id "MSTRG.25017"; transcript_id "MSTRG.25017.1"; exon_number "1"; scaffold_1529 StringTie exon 15364 15638 1000 . . gene_id "MSTRG.25019"; transcript_id "MSTRG.25019.1"; exon_number "1"; scaffold_15298 StringTie exon 10034 10259 1000 . . gene_id "MSTRG.25032"; transcript_id "MSTRG.25032.1"; exon_number "1"; scaffold_15299 StringTie exon 8388 8886 1000 . . gene_id "MSTRG.25033"; transcript_id "MSTRG.25033.1"; exon_number "1"; scaffold_153 StringTie exon 12635 13282 1000 + . gene_id "MSTRG.25037"; transcript_id "MSTRG.25037.1"; exon_number "1"; scaffold_153 StringTie exon 14993 15163 1000 + . gene_id "MSTRG.25037"; transcript_id "MSTRG.25037.1"; exon_number "2"; scaffold_153 StringTie exon 24043 24108 1000 + . gene_id "MSTRG.25037"; transcript_id "MSTRG.25037.1"; exon_number "3"; scaffold_153 StringTie exon 25551 25631 1000 + . gene_id "MSTRG.25037"; transcript_id "MSTRG.25037.1"; exon_number "4"; scaffold_153 StringTie exon 29939 30109 1000 + . gene_id "MSTRG.25037"; transcript_id "MSTRG.25037.1"; exon_number "5"; scaffold_153 StringTie exon 30826 30867 1000 + . gene_id "MSTRG.25037"; transcript_id "MSTRG.25037.1"; exon_number "6"; scaffold_153 StringTie exon 33117 34198 1000 + . gene_id "MSTRG.25037"; transcript_id "MSTRG.25037.1"; exon_number "7"; scaffold_153 StringTie exon 246158 246265 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "1"; scaffold_153 StringTie exon 246354 246510 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "2"; scaffold_153 StringTie exon 255502 255600 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "3"; scaffold_153 StringTie exon 256645 256749 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "4"; scaffold_153 StringTie exon 257612 257731 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "5"; scaffold_153 StringTie exon 258717 258775 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "6"; scaffold_153 StringTie exon 263875 263896 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "7"; scaffold_153 StringTie exon 271366 271397 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "8"; scaffold_153 StringTie exon 271932 272091 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "9"; scaffold_153 StringTie exon 273131 273336 1000 - . gene_id "MSTRG.25058"; transcript_id "MSTRG.25058.1"; exon_number "10"; scaffold_153 StringTie exon 819620 819993 1000 - . gene_id "MSTRG.25103"; transcript_id "MSTRG.25103.1"; exon_number "1"; scaffold_153 StringTie exon 820503 820634 1000 - . gene_id "MSTRG.25103"; transcript_id "MSTRG.25103.1"; exon_number "2"; scaffold_153 StringTie exon 820734 820773 1000 - . gene_id "MSTRG.25103"; transcript_id "MSTRG.25103.1"; exon_number "3"; scaffold_153 StringTie exon 1331192 1331499 1000 . . gene_id "MSTRG.25136"; transcript_id "MSTRG.25136.1"; exon_number "1"; scaffold_15311 StringTie exon 8630 8835 1000 . . gene_id "MSTRG.25170"; transcript_id "MSTRG.25170.1"; exon_number "1"; scaffold_15313 StringTie exon 7152 7469 1000 . . gene_id "MSTRG.25174"; transcript_id "MSTRG.25174.1"; exon_number "1"; scaffold_1532 StringTie exon 208810 209130 1000 . . gene_id "MSTRG.25191"; transcript_id "MSTRG.25191.1"; exon_number "1"; scaffold_15320 StringTie exon 1132 1406 1000 . . gene_id "MSTRG.25192"; transcript_id "MSTRG.25192.1"; exon_number "1"; scaffold_1533 StringTie exon 33662 34447 1000 . . gene_id "MSTRG.25209"; transcript_id "MSTRG.25209.1"; exon_number "1"; scaffold_1533 StringTie exon 64100 64492 1000 . . gene_id "MSTRG.25216"; transcript_id "MSTRG.25216.1"; exon_number "1"; scaffold_1533 StringTie exon 156032 156257 1000 . . gene_id "MSTRG.25226"; transcript_id "MSTRG.25226.1"; exon_number "1"; scaffold_1534 StringTie exon 76716 77127 1000 . . gene_id "MSTRG.25247"; transcript_id "MSTRG.25247.1"; exon_number "1"; scaffold_1534 StringTie exon 176652 177265 1000 . . gene_id "MSTRG.25255"; transcript_id "MSTRG.25255.1"; exon_number "1"; scaffold_1536 StringTie exon 37113 37387 1000 . . gene_id "MSTRG.25288"; transcript_id "MSTRG.25288.1"; exon_number "1"; scaffold_1536 StringTie exon 118562 118694 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "1"; scaffold_1536 StringTie exon 118889 118939 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "2"; scaffold_1536 StringTie exon 119195 119273 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "3"; scaffold_1536 StringTie exon 120738 120846 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "4"; scaffold_1536 StringTie exon 121050 121138 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "5"; scaffold_1536 StringTie exon 121292 121363 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "6"; scaffold_1536 StringTie exon 123624 123753 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "7"; scaffold_1536 StringTie exon 124101 124203 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "8"; scaffold_1536 StringTie exon 124296 124364 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "9"; scaffold_1536 StringTie exon 124682 124874 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "10"; scaffold_1536 StringTie exon 133731 133867 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "11"; scaffold_1536 StringTie exon 135759 135907 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "12"; scaffold_1536 StringTie exon 145146 145275 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "13"; scaffold_1536 StringTie exon 153697 153873 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "14"; scaffold_1536 StringTie exon 155364 155471 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "15"; scaffold_1536 StringTie exon 155786 155982 1000 + . gene_id "MSTRG.25292"; transcript_id "MSTRG.25292.1"; exon_number "16"; scaffold_1536 StringTie exon 159004 159315 1000 . . gene_id "MSTRG.25293"; transcript_id "MSTRG.25293.1"; exon_number "1"; scaffold_1537 StringTie exon 169128 169382 1000 . . gene_id "MSTRG.25307"; transcript_id "MSTRG.25307.1"; exon_number "1"; scaffold_1539 StringTie exon 196651 196870 1000 . . gene_id "MSTRG.25345"; transcript_id "MSTRG.25345.1"; exon_number "1"; scaffold_1539 StringTie exon 211768 211991 1000 . . gene_id "MSTRG.25347"; transcript_id "MSTRG.25347.1"; exon_number "1"; scaffold_15394 StringTie exon 9266 9518 1000 . . gene_id "MSTRG.25352"; transcript_id "MSTRG.25352.1"; exon_number "1"; scaffold_154 StringTie exon 566130 566511 1000 . . gene_id "MSTRG.25382"; transcript_id "MSTRG.25382.1"; exon_number "1"; scaffold_154 StringTie exon 665404 665679 1000 . . gene_id "MSTRG.25388"; transcript_id "MSTRG.25388.1"; exon_number "1"; scaffold_154 StringTie exon 1009630 1010012 1000 . . gene_id "MSTRG.25400"; transcript_id "MSTRG.25400.1"; exon_number "1"; scaffold_154 StringTie exon 1317514 1317713 1000 . . gene_id "MSTRG.25409"; transcript_id "MSTRG.25409.1"; exon_number "1"; scaffold_154 StringTie exon 1438286 1438575 1000 . . gene_id "MSTRG.25414"; transcript_id "MSTRG.25414.1"; exon_number "1"; scaffold_1541 StringTie exon 143825 144311 1000 . . gene_id "MSTRG.25460"; transcript_id "MSTRG.25460.1"; exon_number "1"; scaffold_15421 StringTie exon 1691 1937 1000 . . gene_id "MSTRG.25490"; transcript_id "MSTRG.25490.1"; exon_number "1"; scaffold_15427 StringTie exon 1399 1650 1000 . . gene_id "MSTRG.25496"; transcript_id "MSTRG.25496.1"; exon_number "1"; scaffold_15446 StringTie exon 1083 1314 1000 . . gene_id "MSTRG.25538"; transcript_id "MSTRG.25538.1"; exon_number "1"; scaffold_1546 StringTie exon 104684 104758 1000 + . gene_id "MSTRG.25574"; transcript_id "MSTRG.25574.1"; exon_number "1"; scaffold_1546 StringTie exon 104977 105142 1000 + . gene_id "MSTRG.25574"; transcript_id "MSTRG.25574.1"; exon_number "2"; scaffold_1546 StringTie exon 117192 117405 1000 . . gene_id "MSTRG.25577"; transcript_id "MSTRG.25577.1"; exon_number "1"; scaffold_1546 StringTie exon 201941 202073 1000 + . gene_id "MSTRG.25584"; transcript_id "MSTRG.25584.1"; exon_number "1"; scaffold_1546 StringTie exon 203568 203693 1000 + . gene_id "MSTRG.25584"; transcript_id "MSTRG.25584.1"; exon_number "2"; scaffold_1547 StringTie exon 157270 157480 1000 . . gene_id "MSTRG.25599"; transcript_id "MSTRG.25599.1"; exon_number "1"; scaffold_15476 StringTie exon 1418 1662 1000 . . gene_id "MSTRG.25607"; transcript_id "MSTRG.25607.1"; exon_number "1"; scaffold_1548 StringTie exon 40478 41247 1000 - . gene_id "MSTRG.25613"; transcript_id "MSTRG.25613.1"; exon_number "1"; scaffold_1548 StringTie exon 41452 41544 1000 - . gene_id "MSTRG.25613"; transcript_id "MSTRG.25613.1"; exon_number "2"; scaffold_1548 StringTie exon 41875 41923 1000 - . gene_id "MSTRG.25613"; transcript_id "MSTRG.25613.1"; exon_number "3"; scaffold_1548 StringTie exon 42068 42191 1000 - . gene_id "MSTRG.25613"; transcript_id "MSTRG.25613.1"; exon_number "4"; scaffold_1548 StringTie exon 47374 47425 1000 - . gene_id "MSTRG.25613"; transcript_id "MSTRG.25613.1"; exon_number "5"; scaffold_1549 StringTie exon 101259 101563 1000 . . gene_id "MSTRG.25655"; transcript_id "MSTRG.25655.1"; exon_number "1"; scaffold_155 StringTie exon 209933 210507 1000 . . gene_id "MSTRG.25699"; transcript_id "MSTRG.25699.1"; exon_number "1"; scaffold_155 StringTie exon 304544 304815 1000 . . gene_id "MSTRG.25708"; transcript_id "MSTRG.25708.1"; exon_number "1"; scaffold_155 StringTie exon 453047 453285 1000 . . gene_id "MSTRG.25727"; transcript_id "MSTRG.25727.1"; exon_number "1"; scaffold_155 StringTie exon 494952 495186 1000 . . gene_id "MSTRG.25731"; transcript_id "MSTRG.25731.1"; exon_number "1"; scaffold_155 StringTie exon 959430 960216 1000 . . gene_id "MSTRG.25760"; transcript_id "MSTRG.25760.1"; exon_number "1"; scaffold_155 StringTie exon 1197246 1197478 1000 . . gene_id "MSTRG.25778"; transcript_id "MSTRG.25778.1"; exon_number "1"; scaffold_155 StringTie exon 1202740 1202942 1000 . . gene_id "MSTRG.25779"; transcript_id "MSTRG.25779.1"; exon_number "1"; scaffold_155 StringTie exon 1475154 1475638 1000 . . gene_id "MSTRG.25792"; transcript_id "MSTRG.25792.1"; exon_number "1"; scaffold_1550 StringTie exon 138997 139196 1000 . . gene_id "MSTRG.25807"; transcript_id "MSTRG.25807.1"; exon_number "1"; scaffold_15500 StringTie exon 6571 6868 1000 . . gene_id "MSTRG.25815"; transcript_id "MSTRG.25815.1"; exon_number "1"; scaffold_1551 StringTie exon 84893 85446 1000 . . gene_id "MSTRG.25845"; transcript_id "MSTRG.25845.1"; exon_number "1"; scaffold_15510 StringTie exon 1 248 1000 + . gene_id "MSTRG.25848"; transcript_id "MSTRG.25848.1"; exon_number "1"; scaffold_15510 StringTie exon 1163 2181 1000 + . gene_id "MSTRG.25848"; transcript_id "MSTRG.25848.1"; exon_number "2"; scaffold_15516 StringTie exon 4615 4850 1000 . . gene_id "MSTRG.25855"; transcript_id "MSTRG.25855.1"; exon_number "1"; scaffold_1552 StringTie exon 70965 71197 1000 . . gene_id "MSTRG.25870"; transcript_id "MSTRG.25870.1"; exon_number "1"; scaffold_15520 StringTie exon 8732 8973 1000 . . gene_id "MSTRG.25877"; transcript_id "MSTRG.25877.1"; exon_number "1"; scaffold_15525 StringTie exon 7310 7533 1000 . . gene_id "MSTRG.25881"; transcript_id "MSTRG.25881.1"; exon_number "1"; scaffold_1553 StringTie exon 79648 80432 1000 . . gene_id "MSTRG.25890"; transcript_id "MSTRG.25890.1"; exon_number "1"; scaffold_1554 StringTie exon 21448 21763 1000 . . gene_id "MSTRG.25902"; transcript_id "MSTRG.25902.1"; exon_number "1"; scaffold_1554 StringTie exon 156161 156224 1000 + . gene_id "MSTRG.25917"; transcript_id "MSTRG.25917.1"; exon_number "1"; scaffold_1554 StringTie exon 156395 156615 1000 + . gene_id "MSTRG.25917"; transcript_id "MSTRG.25917.1"; exon_number "2"; scaffold_1554 StringTie exon 197181 197446 1000 . . gene_id "MSTRG.25922"; transcript_id "MSTRG.25922.1"; exon_number "1"; scaffold_15552 StringTie exon 38 266 1000 + . gene_id "MSTRG.25940"; transcript_id "MSTRG.25940.1"; exon_number "1"; scaffold_1556 StringTie exon 135027 135288 1000 . . gene_id "MSTRG.25960"; transcript_id "MSTRG.25960.1"; exon_number "1"; scaffold_1557 StringTie exon 126622 126779 1000 - . gene_id "MSTRG.25990"; transcript_id "MSTRG.25990.1"; exon_number "1"; scaffold_1557 StringTie exon 127391 127524 1000 - . gene_id "MSTRG.25990"; transcript_id "MSTRG.25990.1"; exon_number "2"; scaffold_1558 StringTie exon 27631 27702 1000 + . gene_id "MSTRG.26009"; transcript_id "MSTRG.26009.2"; exon_number "1"; scaffold_1558 StringTie exon 27911 27965 1000 + . gene_id "MSTRG.26009"; transcript_id "MSTRG.26009.2"; exon_number "2"; scaffold_1558 StringTie exon 28048 28129 1000 + . gene_id "MSTRG.26009"; transcript_id "MSTRG.26009.2"; exon_number "3"; scaffold_1558 StringTie exon 29252 29318 1000 + . gene_id "MSTRG.26009"; transcript_id "MSTRG.26009.2"; exon_number "4"; scaffold_1558 StringTie exon 42436 42926 1000 . . gene_id "MSTRG.26012"; transcript_id "MSTRG.26012.1"; exon_number "1"; scaffold_1558 StringTie exon 85826 85862 1000 - . gene_id "MSTRG.26017"; transcript_id "MSTRG.26017.1"; exon_number "1"; scaffold_1558 StringTie exon 86097 86202 1000 - . gene_id "MSTRG.26017"; transcript_id "MSTRG.26017.1"; exon_number "2"; scaffold_1558 StringTie exon 86391 86447 1000 - . gene_id "MSTRG.26017"; transcript_id "MSTRG.26017.1"; exon_number "3"; scaffold_1558 StringTie exon 86916 86996 1000 - . gene_id "MSTRG.26017"; transcript_id "MSTRG.26017.1"; exon_number "4"; scaffold_1558 StringTie exon 88031 88100 1000 - . gene_id "MSTRG.26017"; transcript_id "MSTRG.26017.1"; exon_number "5"; scaffold_1558 StringTie exon 193095 193343 1000 . . gene_id "MSTRG.26027"; transcript_id "MSTRG.26027.1"; exon_number "1"; scaffold_15582 StringTie exon 10456 10775 1000 . . gene_id "MSTRG.26035"; transcript_id "MSTRG.26035.1"; exon_number "1"; scaffold_15583 StringTie exon 7038 7326 1000 . . gene_id "MSTRG.26037"; transcript_id "MSTRG.26037.1"; exon_number "1"; scaffold_1559 StringTie exon 31853 31986 1000 - . gene_id "MSTRG.26049"; transcript_id "MSTRG.26049.1"; exon_number "1"; scaffold_1559 StringTie exon 39982 40141 1000 - . gene_id "MSTRG.26049"; transcript_id "MSTRG.26049.1"; exon_number "2"; scaffold_1559 StringTie exon 43226 43323 1000 - . gene_id "MSTRG.26049"; transcript_id "MSTRG.26049.1"; exon_number "3"; scaffold_1559 StringTie exon 183582 183681 1000 + . gene_id "MSTRG.26060"; transcript_id "MSTRG.26060.2"; exon_number "1"; scaffold_1559 StringTie exon 183901 183948 1000 + . gene_id "MSTRG.26060"; transcript_id "MSTRG.26060.2"; exon_number "2"; scaffold_1559 StringTie exon 184171 184246 1000 + . gene_id "MSTRG.26060"; transcript_id "MSTRG.26060.2"; exon_number "3"; scaffold_1559 StringTie exon 184823 184881 1000 + . gene_id "MSTRG.26060"; transcript_id "MSTRG.26060.2"; exon_number "4"; scaffold_1559 StringTie exon 191337 192408 1000 + . gene_id "MSTRG.26060"; transcript_id "MSTRG.26060.2"; exon_number "5"; scaffold_15590 StringTie exon 2347 2628 1000 . . gene_id "MSTRG.26062"; transcript_id "MSTRG.26062.1"; exon_number "1"; scaffold_156 StringTie exon 35821 36033 1000 . . gene_id "MSTRG.26070"; transcript_id "MSTRG.26070.1"; exon_number "1"; scaffold_156 StringTie exon 99796 100081 1000 . . gene_id "MSTRG.26081"; transcript_id "MSTRG.26081.1"; exon_number "1"; scaffold_156 StringTie exon 178669 179451 1000 . . gene_id "MSTRG.26086"; transcript_id "MSTRG.26086.1"; exon_number "1"; scaffold_156 StringTie exon 274778 275055 1000 . . gene_id "MSTRG.26102"; transcript_id "MSTRG.26102.1"; exon_number "1"; scaffold_156 StringTie exon 280405 280616 1000 . . gene_id "MSTRG.26104"; transcript_id "MSTRG.26104.1"; exon_number "1"; scaffold_1560 StringTie exon 90011 90552 1000 . . gene_id "MSTRG.26160"; transcript_id "MSTRG.26160.1"; exon_number "1"; scaffold_15600 StringTie exon 5979 6272 1000 . . gene_id "MSTRG.26166"; transcript_id "MSTRG.26166.1"; exon_number "1"; scaffold_1561 StringTie exon 594 1286 1000 . . gene_id "MSTRG.26175"; transcript_id "MSTRG.26175.1"; exon_number "1"; scaffold_15619 StringTie exon 7802 8004 1000 . . gene_id "MSTRG.26205"; transcript_id "MSTRG.26205.1"; exon_number "1"; scaffold_1562 StringTie exon 8377 8605 1000 . . gene_id "MSTRG.26208"; transcript_id "MSTRG.26208.1"; exon_number "1"; scaffold_1562 StringTie exon 145635 145970 1000 . . gene_id "MSTRG.26214"; transcript_id "MSTRG.26214.1"; exon_number "1"; scaffold_15629 StringTie exon 2379 2656 1000 . . gene_id "MSTRG.26226"; transcript_id "MSTRG.26226.1"; exon_number "1"; scaffold_1563 StringTie exon 159368 159602 1000 . . gene_id "MSTRG.26241"; transcript_id "MSTRG.26241.1"; exon_number "1"; scaffold_1564 StringTie exon 81563 81767 1000 . . gene_id "MSTRG.26262"; transcript_id "MSTRG.26262.1"; exon_number "1"; scaffold_1564 StringTie exon 163880 164194 1000 . . gene_id "MSTRG.26273"; transcript_id "MSTRG.26273.1"; exon_number "1"; scaffold_15649 StringTie exon 2328 3008 1000 . . gene_id "MSTRG.26288"; transcript_id "MSTRG.26288.1"; exon_number "1"; scaffold_15655 StringTie exon 3132 3469 1000 . . gene_id "MSTRG.26312"; transcript_id "MSTRG.26312.1"; exon_number "1"; scaffold_1566 StringTie exon 44878 45525 1000 . . gene_id "MSTRG.26317"; transcript_id "MSTRG.26317.1"; exon_number "1"; scaffold_15665 StringTie exon 4139 4353 1000 . . gene_id "MSTRG.26326"; transcript_id "MSTRG.26326.1"; exon_number "1"; scaffold_15666 StringTie exon 1192 1492 1000 . . gene_id "MSTRG.26327"; transcript_id "MSTRG.26327.1"; exon_number "1"; scaffold_1567 StringTie exon 124026 124283 1000 . . gene_id "MSTRG.26337"; transcript_id "MSTRG.26337.1"; exon_number "1"; scaffold_15671 StringTie exon 9325 10505 1000 . . gene_id "MSTRG.26346"; transcript_id "MSTRG.26346.1"; exon_number "1"; scaffold_15679 StringTie exon 526 735 1000 . . gene_id "MSTRG.26350"; transcript_id "MSTRG.26350.1"; exon_number "1"; scaffold_1568 StringTie exon 15595 16143 1000 . . gene_id "MSTRG.26357"; transcript_id "MSTRG.26357.1"; exon_number "1"; scaffold_1568 StringTie exon 68156 68735 1000 . . gene_id "MSTRG.26366"; transcript_id "MSTRG.26366.1"; exon_number "1"; scaffold_1568 StringTie exon 150541 151077 1000 . . gene_id "MSTRG.26375"; transcript_id "MSTRG.26375.1"; exon_number "1"; scaffold_1568 StringTie exon 165389 165473 1000 - . gene_id "MSTRG.26381"; transcript_id "MSTRG.26381.1"; exon_number "1"; scaffold_1568 StringTie exon 165567 165673 1000 - . gene_id "MSTRG.26381"; transcript_id "MSTRG.26381.1"; exon_number "2"; scaffold_1568 StringTie exon 165772 165952 1000 - . gene_id "MSTRG.26381"; transcript_id "MSTRG.26381.1"; exon_number "3"; scaffold_1568 StringTie exon 191207 191302 1000 - . gene_id "MSTRG.26388"; transcript_id "MSTRG.26388.1"; exon_number "1"; scaffold_1568 StringTie exon 191454 191565 1000 - . gene_id "MSTRG.26388"; transcript_id "MSTRG.26388.1"; exon_number "2"; scaffold_1568 StringTie exon 191647 191726 1000 - . gene_id "MSTRG.26388"; transcript_id "MSTRG.26388.1"; exon_number "3"; scaffold_1568 StringTie exon 191816 191862 1000 - . gene_id "MSTRG.26388"; transcript_id "MSTRG.26388.1"; exon_number "4"; scaffold_1568 StringTie exon 202334 202512 1000 - . gene_id "MSTRG.26392"; transcript_id "MSTRG.26392.1"; exon_number "1"; scaffold_1568 StringTie exon 203165 203344 1000 - . gene_id "MSTRG.26392"; transcript_id "MSTRG.26392.1"; exon_number "2"; scaffold_1568 StringTie exon 205680 205709 1000 - . gene_id "MSTRG.26392"; transcript_id "MSTRG.26392.1"; exon_number "3"; scaffold_1568 StringTie exon 206800 206935 1000 - . gene_id "MSTRG.26392"; transcript_id "MSTRG.26392.1"; exon_number "4"; scaffold_15697 StringTie exon 8313 8620 1000 . . gene_id "MSTRG.26413"; transcript_id "MSTRG.26413.1"; exon_number "1"; scaffold_157 StringTie exon 56369 56710 1000 . . gene_id "MSTRG.26418"; transcript_id "MSTRG.26418.1"; exon_number "1"; scaffold_157 StringTie exon 97826 97985 1000 - . gene_id "MSTRG.26421"; transcript_id "MSTRG.26421.1"; exon_number "1"; scaffold_157 StringTie exon 99487 99556 1000 - . gene_id "MSTRG.26421"; transcript_id "MSTRG.26421.1"; exon_number "2"; scaffold_157 StringTie exon 109887 109964 1000 - . gene_id "MSTRG.26421"; transcript_id "MSTRG.26421.1"; exon_number "3"; scaffold_157 StringTie exon 431895 432131 1000 . . gene_id "MSTRG.26443"; transcript_id "MSTRG.26443.1"; exon_number "1"; scaffold_157 StringTie exon 436737 436936 1000 - . gene_id "MSTRG.26444"; transcript_id "MSTRG.26444.1"; exon_number "1"; scaffold_157 StringTie exon 437292 437425 1000 - . gene_id "MSTRG.26444"; transcript_id "MSTRG.26444.1"; exon_number "2"; scaffold_157 StringTie exon 439304 439348 1000 - . gene_id "MSTRG.26444"; transcript_id "MSTRG.26444.1"; exon_number "3"; scaffold_157 StringTie exon 439777 439849 1000 - . gene_id "MSTRG.26444"; transcript_id "MSTRG.26444.1"; exon_number "4"; scaffold_157 StringTie exon 440033 440160 1000 - . gene_id "MSTRG.26444"; transcript_id "MSTRG.26444.1"; exon_number "5"; scaffold_157 StringTie exon 440285 440369 1000 - . gene_id "MSTRG.26444"; transcript_id "MSTRG.26444.1"; exon_number "6"; scaffold_157 StringTie exon 440673 440772 1000 - . gene_id "MSTRG.26444"; transcript_id "MSTRG.26444.1"; exon_number "7"; scaffold_157 StringTie exon 444415 444449 1000 - . gene_id "MSTRG.26444"; transcript_id "MSTRG.26444.1"; exon_number "8"; scaffold_157 StringTie exon 450465 451043 1000 . . gene_id "MSTRG.26446"; transcript_id "MSTRG.26446.1"; exon_number "1"; scaffold_157 StringTie exon 461304 461488 1000 - . gene_id "MSTRG.26447"; transcript_id "MSTRG.26447.1"; exon_number "1"; scaffold_157 StringTie exon 461748 461795 1000 - . gene_id "MSTRG.26447"; transcript_id "MSTRG.26447.1"; exon_number "2"; scaffold_157 StringTie exon 536681 536905 1000 . . gene_id "MSTRG.26450"; transcript_id "MSTRG.26450.1"; exon_number "1"; scaffold_157 StringTie exon 1060994 1061217 1000 . . gene_id "MSTRG.26481"; transcript_id "MSTRG.26481.1"; exon_number "1"; scaffold_157 StringTie exon 1167355 1167777 1000 . . gene_id "MSTRG.26484"; transcript_id "MSTRG.26484.1"; exon_number "1"; scaffold_157 StringTie exon 1235275 1235560 1000 . . gene_id "MSTRG.26490"; transcript_id "MSTRG.26490.1"; exon_number "1"; scaffold_157 StringTie exon 1249812 1249933 1000 + . gene_id "MSTRG.26492"; transcript_id "MSTRG.26492.1"; exon_number "1"; scaffold_157 StringTie exon 1250119 1250250 1000 + . gene_id "MSTRG.26492"; transcript_id "MSTRG.26492.1"; exon_number "2"; scaffold_1572 StringTie exon 75363 76268 1000 . . gene_id "MSTRG.26556"; transcript_id "MSTRG.26556.1"; exon_number "1"; scaffold_1572 StringTie exon 169310 169524 1000 . . gene_id "MSTRG.26560"; transcript_id "MSTRG.26560.1"; exon_number "1"; scaffold_15724 StringTie exon 5 238 1000 . . gene_id "MSTRG.26569"; transcript_id "MSTRG.26569.1"; exon_number "1"; scaffold_1573 StringTie exon 195316 195604 1000 . . gene_id "MSTRG.26583"; transcript_id "MSTRG.26583.1"; exon_number "1"; scaffold_1574 StringTie exon 116301 116584 1000 . . gene_id "MSTRG.26602"; transcript_id "MSTRG.26602.1"; exon_number "1"; scaffold_15754 StringTie exon 10545 10756 1000 . . gene_id "MSTRG.26635"; transcript_id "MSTRG.26635.1"; exon_number "1"; scaffold_1576 StringTie exon 116847 117078 1000 . . gene_id "MSTRG.26644"; transcript_id "MSTRG.26644.1"; exon_number "1"; scaffold_1576 StringTie exon 174050 174553 1000 . . gene_id "MSTRG.26651"; transcript_id "MSTRG.26651.1"; exon_number "1"; scaffold_1578 StringTie exon 33607 34069 1000 . . gene_id "MSTRG.26680"; transcript_id "MSTRG.26680.1"; exon_number "1"; scaffold_15796 StringTie exon 1975 2240 1000 . . gene_id "MSTRG.26715"; transcript_id "MSTRG.26715.1"; exon_number "1"; scaffold_15797 StringTie exon 2552 3164 1000 . . gene_id "MSTRG.26716"; transcript_id "MSTRG.26716.1"; exon_number "1"; scaffold_158 StringTie exon 61074 61093 1000 - . gene_id "MSTRG.26728"; transcript_id "MSTRG.26728.1"; exon_number "1"; scaffold_158 StringTie exon 61490 61666 1000 - . gene_id "MSTRG.26728"; transcript_id "MSTRG.26728.1"; exon_number "2"; scaffold_158 StringTie exon 61783 61865 1000 - . gene_id "MSTRG.26728"; transcript_id "MSTRG.26728.1"; exon_number "3"; scaffold_158 StringTie exon 436686 436917 1000 . . gene_id "MSTRG.26758"; transcript_id "MSTRG.26758.1"; exon_number "1"; scaffold_158 StringTie exon 878460 878674 1000 . . gene_id "MSTRG.26779"; transcript_id "MSTRG.26779.1"; exon_number "1"; scaffold_158 StringTie exon 1098627 1098886 1000 . . gene_id "MSTRG.26790"; transcript_id "MSTRG.26790.1"; exon_number "1"; scaffold_158 StringTie exon 1455364 1455801 1000 . . gene_id "MSTRG.26802"; transcript_id "MSTRG.26802.1"; exon_number "1"; scaffold_1580 StringTie exon 25910 26264 1000 . . gene_id "MSTRG.26805"; transcript_id "MSTRG.26805.1"; exon_number "1"; scaffold_1580 StringTie exon 58180 58387 1000 . . gene_id "MSTRG.26808"; transcript_id "MSTRG.26808.1"; exon_number "1"; scaffold_1581 StringTie exon 183318 183553 1000 . . gene_id "MSTRG.26829"; transcript_id "MSTRG.26829.1"; exon_number "1"; scaffold_15813 StringTie exon 9359 9609 1000 . . gene_id "MSTRG.26834"; transcript_id "MSTRG.26834.1"; exon_number "1"; scaffold_15814 StringTie exon 2916 3404 1000 . . gene_id "MSTRG.26836"; transcript_id "MSTRG.26836.1"; exon_number "1"; scaffold_1582 StringTie exon 127660 128045 1000 . . gene_id "MSTRG.26854"; transcript_id "MSTRG.26854.1"; exon_number "1"; scaffold_1582 StringTie exon 166768 166801 1000 + . gene_id "MSTRG.26859"; transcript_id "MSTRG.26859.1"; exon_number "1"; scaffold_1582 StringTie exon 168586 168761 1000 + . gene_id "MSTRG.26859"; transcript_id "MSTRG.26859.1"; exon_number "2"; scaffold_1583 StringTie exon 1264 1273 1000 + . gene_id "MSTRG.26868"; transcript_id "MSTRG.26868.1"; exon_number "1"; scaffold_1583 StringTie exon 1477 1787 1000 + . gene_id "MSTRG.26868"; transcript_id "MSTRG.26868.1"; exon_number "2"; scaffold_1583 StringTie exon 119052 120055 1000 . . gene_id "MSTRG.26877"; transcript_id "MSTRG.26877.1"; exon_number "1"; scaffold_1583 StringTie exon 127364 127590 1000 . . gene_id "MSTRG.26880"; transcript_id "MSTRG.26880.1"; exon_number "1"; scaffold_1583 StringTie exon 134681 134925 1000 . . gene_id "MSTRG.26881"; transcript_id "MSTRG.26881.1"; exon_number "1"; scaffold_1583 StringTie exon 151811 152140 1000 . . gene_id "MSTRG.26882"; transcript_id "MSTRG.26882.1"; exon_number "1"; scaffold_15833 StringTie exon 9787 10244 1000 . . gene_id "MSTRG.26897"; transcript_id "MSTRG.26897.1"; exon_number "1"; scaffold_1584 StringTie exon 7819 8193 1000 . . gene_id "MSTRG.26906"; transcript_id "MSTRG.26906.1"; exon_number "1"; scaffold_1584 StringTie exon 186458 186740 1000 . . gene_id "MSTRG.26921"; transcript_id "MSTRG.26921.1"; exon_number "1"; scaffold_1587 StringTie exon 51613 51822 1000 . . gene_id "MSTRG.26970"; transcript_id "MSTRG.26970.1"; exon_number "1"; scaffold_1587 StringTie exon 167894 168139 1000 . . gene_id "MSTRG.26983"; transcript_id "MSTRG.26983.1"; exon_number "1"; scaffold_15885 StringTie exon 8441 8842 1000 . . gene_id "MSTRG.27015"; transcript_id "MSTRG.27015.1"; exon_number "1"; scaffold_15892 StringTie exon 8792 10775 1000 . . gene_id "MSTRG.27026"; transcript_id "MSTRG.27026.1"; exon_number "1"; scaffold_15894 StringTie exon 386 618 1000 . . gene_id "MSTRG.27028"; transcript_id "MSTRG.27028.1"; exon_number "1"; scaffold_159 StringTie exon 326989 327036 1000 - . gene_id "MSTRG.27056"; transcript_id "MSTRG.27056.1"; exon_number "1"; scaffold_159 StringTie exon 328594 328648 1000 - . gene_id "MSTRG.27056"; transcript_id "MSTRG.27056.1"; exon_number "2"; scaffold_159 StringTie exon 328878 328968 1000 - . gene_id "MSTRG.27056"; transcript_id "MSTRG.27056.1"; exon_number "3"; scaffold_159 StringTie exon 332910 332960 1000 - . gene_id "MSTRG.27056"; transcript_id "MSTRG.27056.1"; exon_number "4"; scaffold_159 StringTie exon 505774 507216 1000 - . gene_id "MSTRG.27074"; transcript_id "MSTRG.27074.1"; exon_number "1"; scaffold_159 StringTie exon 507566 507621 1000 - . gene_id "MSTRG.27074"; transcript_id "MSTRG.27074.1"; exon_number "2"; scaffold_159 StringTie exon 507890 507945 1000 - . gene_id "MSTRG.27074"; transcript_id "MSTRG.27074.1"; exon_number "3"; scaffold_159 StringTie exon 1152597 1152854 1000 . . gene_id "MSTRG.27098"; transcript_id "MSTRG.27098.1"; exon_number "1"; scaffold_15919 StringTie exon 6263 6474 1000 . . gene_id "MSTRG.27140"; transcript_id "MSTRG.27140.1"; exon_number "1"; scaffold_15924 StringTie exon 642 843 1000 . . gene_id "MSTRG.27155"; transcript_id "MSTRG.27155.1"; exon_number "1"; scaffold_15930 StringTie exon 2504 2652 1000 + . gene_id "MSTRG.27173"; transcript_id "MSTRG.27173.1"; exon_number "1"; scaffold_15930 StringTie exon 5631 5721 1000 + . gene_id "MSTRG.27173"; transcript_id "MSTRG.27173.1"; exon_number "2"; scaffold_15930 StringTie exon 5859 6070 1000 + . gene_id "MSTRG.27173"; transcript_id "MSTRG.27173.1"; exon_number "3"; scaffold_15939 StringTie exon 7577 7962 1000 . . gene_id "MSTRG.27181"; transcript_id "MSTRG.27181.1"; exon_number "1"; scaffold_15966 StringTie exon 4615 4849 1000 . . gene_id "MSTRG.27238"; transcript_id "MSTRG.27238.1"; exon_number "1"; scaffold_1597 StringTie exon 30605 30874 1000 . . gene_id "MSTRG.27245"; transcript_id "MSTRG.27245.1"; exon_number "1"; scaffold_1597 StringTie exon 57121 57396 1000 + . gene_id "MSTRG.27250"; transcript_id "MSTRG.27250.2"; exon_number "1"; scaffold_1597 StringTie exon 57450 57477 1000 + . gene_id "MSTRG.27250"; transcript_id "MSTRG.27250.2"; exon_number "2"; scaffold_1598 StringTie exon 20555 20958 1000 . . gene_id "MSTRG.27274"; transcript_id "MSTRG.27274.1"; exon_number "1"; scaffold_1598 StringTie exon 117646 119245 1000 . . gene_id "MSTRG.27281"; transcript_id "MSTRG.27281.1"; exon_number "1"; scaffold_1598 StringTie exon 154060 154300 1000 + . gene_id "MSTRG.27283"; transcript_id "MSTRG.27283.1"; exon_number "1"; scaffold_1598 StringTie exon 167109 167190 1000 + . gene_id "MSTRG.27283"; transcript_id "MSTRG.27283.1"; exon_number "2"; scaffold_15980 StringTie exon 9896 10674 1000 . . gene_id "MSTRG.27293"; transcript_id "MSTRG.27293.1"; exon_number "1"; scaffold_15989 StringTie exon 10196 10667 1000 . . gene_id "MSTRG.27304"; transcript_id "MSTRG.27304.1"; exon_number "1"; scaffold_15994 StringTie exon 2219 2454 1000 . . gene_id "MSTRG.27331"; transcript_id "MSTRG.27331.1"; exon_number "1"; scaffold_16 StringTie exon 173051 173273 1000 . . gene_id "MSTRG.27343"; transcript_id "MSTRG.27343.1"; exon_number "1"; scaffold_16 StringTie exon 727419 727633 1000 . . gene_id "MSTRG.27377"; transcript_id "MSTRG.27377.1"; exon_number "1"; scaffold_16 StringTie exon 760103 760379 1000 . . gene_id "MSTRG.27382"; transcript_id "MSTRG.27382.1"; exon_number "1"; scaffold_16 StringTie exon 891209 891408 1000 . . gene_id "MSTRG.27387"; transcript_id "MSTRG.27387.1"; exon_number "1"; scaffold_16 StringTie exon 1036235 1036312 1000 + . gene_id "MSTRG.27392"; transcript_id "MSTRG.27392.1"; exon_number "1"; scaffold_16 StringTie exon 1036434 1036487 1000 + . gene_id "MSTRG.27392"; transcript_id "MSTRG.27392.1"; exon_number "2"; scaffold_16 StringTie exon 1036576 1036605 1000 + . gene_id "MSTRG.27392"; transcript_id "MSTRG.27392.1"; exon_number "3"; scaffold_16 StringTie exon 1036705 1036765 1000 + . gene_id "MSTRG.27392"; transcript_id "MSTRG.27392.1"; exon_number "4"; scaffold_16 StringTie exon 1185219 1185231 1000 - . gene_id "MSTRG.27409"; transcript_id "MSTRG.27409.1"; exon_number "1"; scaffold_16 StringTie exon 1207398 1208105 1000 - . gene_id "MSTRG.27409"; transcript_id "MSTRG.27409.1"; exon_number "2"; scaffold_16 StringTie exon 1208231 1208309 1000 - . gene_id "MSTRG.27409"; transcript_id "MSTRG.27409.1"; exon_number "3"; scaffold_16 StringTie exon 1208493 1208603 1000 - . gene_id "MSTRG.27409"; transcript_id "MSTRG.27409.1"; exon_number "4"; scaffold_16 StringTie exon 1208856 1208969 1000 - . gene_id "MSTRG.27409"; transcript_id "MSTRG.27409.1"; exon_number "5"; scaffold_16 StringTie exon 1210225 1210337 1000 - . gene_id "MSTRG.27409"; transcript_id "MSTRG.27409.1"; exon_number "6"; scaffold_16 StringTie exon 1238862 1239056 1000 + . gene_id "MSTRG.27413"; transcript_id "MSTRG.27413.1"; exon_number "1"; scaffold_16 StringTie exon 1239330 1239344 1000 + . gene_id "MSTRG.27413"; transcript_id "MSTRG.27413.1"; exon_number "2"; scaffold_16 StringTie exon 1269935 1270738 1000 . . gene_id "MSTRG.27417"; transcript_id "MSTRG.27417.1"; exon_number "1"; scaffold_16 StringTie exon 1348914 1349134 1000 . . gene_id "MSTRG.27432"; transcript_id "MSTRG.27432.1"; exon_number "1"; scaffold_16 StringTie exon 1477068 1477335 1000 . . gene_id "MSTRG.27439"; transcript_id "MSTRG.27439.1"; exon_number "1"; scaffold_16 StringTie exon 2124917 2125150 1000 . . gene_id "MSTRG.27476"; transcript_id "MSTRG.27476.1"; exon_number "1"; scaffold_16 StringTie exon 2176297 2176567 1000 . . gene_id "MSTRG.27480"; transcript_id "MSTRG.27480.1"; exon_number "1"; scaffold_16 StringTie exon 2338070 2338324 1000 . . gene_id "MSTRG.27488"; transcript_id "MSTRG.27488.1"; exon_number "1"; scaffold_16 StringTie exon 2700050 2700329 1000 . . gene_id "MSTRG.27505"; transcript_id "MSTRG.27505.1"; exon_number "1"; scaffold_160 StringTie exon 180946 181213 1000 . . gene_id "MSTRG.27520"; transcript_id "MSTRG.27520.1"; exon_number "1"; scaffold_160 StringTie exon 449044 449216 1000 - . gene_id "MSTRG.27542"; transcript_id "MSTRG.27542.1"; exon_number "1"; scaffold_160 StringTie exon 449474 449604 1000 - . gene_id "MSTRG.27542"; transcript_id "MSTRG.27542.1"; exon_number "2"; scaffold_160 StringTie exon 514881 515093 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "1"; scaffold_160 StringTie exon 515241 515306 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "2"; scaffold_160 StringTie exon 519135 519291 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "3"; scaffold_160 StringTie exon 520344 520475 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "4"; scaffold_160 StringTie exon 523231 523295 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "5"; scaffold_160 StringTie exon 524182 524266 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "6"; scaffold_160 StringTie exon 527580 527670 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "7"; scaffold_160 StringTie exon 532567 532597 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "8"; scaffold_160 StringTie exon 532964 533034 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "9"; scaffold_160 StringTie exon 536890 536964 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "10"; scaffold_160 StringTie exon 537104 537160 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "11"; scaffold_160 StringTie exon 537665 537853 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "12"; scaffold_160 StringTie exon 539834 539902 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "13"; scaffold_160 StringTie exon 543267 543398 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "14"; scaffold_160 StringTie exon 543987 544045 1000 - . gene_id "MSTRG.27546"; transcript_id "MSTRG.27546.1"; exon_number "15"; scaffold_160 StringTie exon 656233 656469 1000 - . gene_id "MSTRG.27553"; transcript_id "MSTRG.27553.1"; exon_number "1"; scaffold_160 StringTie exon 658151 658282 1000 - . gene_id "MSTRG.27553"; transcript_id "MSTRG.27553.1"; exon_number "2"; scaffold_160 StringTie exon 659368 659448 1000 - . gene_id "MSTRG.27553"; transcript_id "MSTRG.27553.1"; exon_number "3"; scaffold_160 StringTie exon 715390 715706 1000 . . gene_id "MSTRG.27561"; transcript_id "MSTRG.27561.1"; exon_number "1"; scaffold_160 StringTie exon 841892 842120 1000 . . gene_id "MSTRG.27574"; transcript_id "MSTRG.27574.1"; exon_number "1"; scaffold_160 StringTie exon 908478 908527 1000 - . gene_id "MSTRG.27579"; transcript_id "MSTRG.27579.1"; exon_number "1"; scaffold_160 StringTie exon 937493 937688 1000 - . gene_id "MSTRG.27579"; transcript_id "MSTRG.27579.1"; exon_number "2"; scaffold_160 StringTie exon 1114394 1114657 1000 . . gene_id "MSTRG.27583"; transcript_id "MSTRG.27583.1"; exon_number "1"; scaffold_160 StringTie exon 1195595 1195802 1000 . . gene_id "MSTRG.27588"; transcript_id "MSTRG.27588.1"; exon_number "1"; scaffold_160 StringTie exon 1343483 1343940 1000 . . gene_id "MSTRG.27597"; transcript_id "MSTRG.27597.1"; exon_number "1"; scaffold_1600 StringTie exon 98121 98864 1000 . . gene_id "MSTRG.27620"; transcript_id "MSTRG.27620.1"; exon_number "1"; scaffold_1600 StringTie exon 163576 163648 1000 + . gene_id "MSTRG.27632"; transcript_id "MSTRG.27632.1"; exon_number "1"; scaffold_1600 StringTie exon 163752 163883 1000 + . gene_id "MSTRG.27632"; transcript_id "MSTRG.27632.1"; exon_number "2"; scaffold_1600 StringTie exon 173380 173484 1000 + . gene_id "MSTRG.27632"; transcript_id "MSTRG.27632.1"; exon_number "3"; scaffold_1600 StringTie exon 173680 173694 1000 + . gene_id "MSTRG.27632"; transcript_id "MSTRG.27632.1"; exon_number "4"; scaffold_1601 StringTie exon 46672 46989 1000 . . gene_id "MSTRG.27662"; transcript_id "MSTRG.27662.1"; exon_number "1"; scaffold_16014 StringTie exon 1064 1292 1000 . . gene_id "MSTRG.27674"; transcript_id "MSTRG.27674.1"; exon_number "1"; scaffold_1603 StringTie exon 177246 177558 1000 . . gene_id "MSTRG.27730"; transcript_id "MSTRG.27730.1"; exon_number "1"; scaffold_1604 StringTie exon 137632 137683 1000 + . gene_id "MSTRG.27752"; transcript_id "MSTRG.27752.2"; exon_number "1"; scaffold_1604 StringTie exon 138482 138701 1000 + . gene_id "MSTRG.27752"; transcript_id "MSTRG.27752.2"; exon_number "2"; scaffold_1604 StringTie exon 139414 139532 1000 + . gene_id "MSTRG.27752"; transcript_id "MSTRG.27752.2"; exon_number "3"; scaffold_1604 StringTie exon 139756 140010 1000 + . gene_id "MSTRG.27752"; transcript_id "MSTRG.27752.2"; exon_number "4"; scaffold_1604 StringTie exon 140413 140486 1000 + . gene_id "MSTRG.27752"; transcript_id "MSTRG.27752.2"; exon_number "5"; scaffold_1604 StringTie exon 165371 165591 1000 . . gene_id "MSTRG.27753"; transcript_id "MSTRG.27753.1"; exon_number "1"; scaffold_1604 StringTie exon 179004 179232 1000 . . gene_id "MSTRG.27754"; transcript_id "MSTRG.27754.1"; exon_number "1"; scaffold_16043 StringTie exon 9901 10110 1000 . . gene_id "MSTRG.27765"; transcript_id "MSTRG.27765.1"; exon_number "1"; scaffold_1605 StringTie exon 139385 139462 1000 - . gene_id "MSTRG.27786"; transcript_id "MSTRG.27786.1"; exon_number "1"; scaffold_1605 StringTie exon 147192 147329 1000 - . gene_id "MSTRG.27786"; transcript_id "MSTRG.27786.1"; exon_number "2"; scaffold_1605 StringTie exon 147658 147700 1000 - . gene_id "MSTRG.27786"; transcript_id "MSTRG.27786.1"; exon_number "3"; scaffold_1605 StringTie exon 188857 189122 1000 . . gene_id "MSTRG.27795"; transcript_id "MSTRG.27795.1"; exon_number "1"; scaffold_16053 StringTie exon 6935 7361 1000 . . gene_id "MSTRG.27799"; transcript_id "MSTRG.27799.1"; exon_number "1"; scaffold_16053 StringTie exon 8644 8965 1000 . . gene_id "MSTRG.27800"; transcript_id "MSTRG.27800.1"; exon_number "1"; scaffold_1606 StringTie exon 22664 22896 1000 . . gene_id "MSTRG.27806"; transcript_id "MSTRG.27806.1"; exon_number "1"; scaffold_16061 StringTie exon 8242 8773 1000 . . gene_id "MSTRG.27816"; transcript_id "MSTRG.27816.1"; exon_number "1"; scaffold_16074 StringTie exon 4490 4760 1000 + . gene_id "MSTRG.27832"; transcript_id "MSTRG.27832.1"; exon_number "1"; scaffold_16074 StringTie exon 5132 5230 1000 + . gene_id "MSTRG.27832"; transcript_id "MSTRG.27832.1"; exon_number "2"; scaffold_16074 StringTie exon 7597 7631 1000 + . gene_id "MSTRG.27832"; transcript_id "MSTRG.27832.1"; exon_number "3"; scaffold_1608 StringTie exon 63234 63483 1000 . . gene_id "MSTRG.27840"; transcript_id "MSTRG.27840.1"; exon_number "1"; scaffold_16081 StringTie exon 6554 7192 1000 . . gene_id "MSTRG.27853"; transcript_id "MSTRG.27853.1"; exon_number "1"; scaffold_1609 StringTie exon 57709 57886 1000 - . gene_id "MSTRG.27874"; transcript_id "MSTRG.27874.1"; exon_number "1"; scaffold_1609 StringTie exon 60426 60500 1000 - . gene_id "MSTRG.27874"; transcript_id "MSTRG.27874.1"; exon_number "2"; scaffold_1609 StringTie exon 60605 60870 1000 - . gene_id "MSTRG.27874"; transcript_id "MSTRG.27874.1"; exon_number "3"; scaffold_1609 StringTie exon 68026 68182 1000 - . gene_id "MSTRG.27878"; transcript_id "MSTRG.27878.1"; exon_number "1"; scaffold_1609 StringTie exon 69966 70056 1000 - . gene_id "MSTRG.27878"; transcript_id "MSTRG.27878.1"; exon_number "2"; scaffold_16097 StringTie exon 614 1430 1000 . . gene_id "MSTRG.27895"; transcript_id "MSTRG.27895.1"; exon_number "1"; scaffold_161 StringTie exon 285466 285871 1000 . . gene_id "MSTRG.27908"; transcript_id "MSTRG.27908.1"; exon_number "1"; scaffold_161 StringTie exon 578298 578564 1000 - . gene_id "MSTRG.27921"; transcript_id "MSTRG.27921.1"; exon_number "1"; scaffold_161 StringTie exon 594192 594259 1000 - . gene_id "MSTRG.27921"; transcript_id "MSTRG.27921.1"; exon_number "2"; scaffold_161 StringTie exon 633160 633497 1000 . . gene_id "MSTRG.27924"; transcript_id "MSTRG.27924.1"; exon_number "1"; scaffold_161 StringTie exon 1039116 1039585 1000 . . gene_id "MSTRG.27963"; transcript_id "MSTRG.27963.1"; exon_number "1"; scaffold_161 StringTie exon 1098127 1098328 1000 . . gene_id "MSTRG.27972"; transcript_id "MSTRG.27972.1"; exon_number "1"; scaffold_161 StringTie exon 1341884 1342294 1000 - . gene_id "MSTRG.27992"; transcript_id "MSTRG.27992.3"; exon_number "1"; scaffold_161 StringTie exon 1383830 1383839 1000 - . gene_id "MSTRG.27992"; transcript_id "MSTRG.27992.3"; exon_number "2"; scaffold_1610 StringTie exon 89974 90269 1000 . . gene_id "MSTRG.28004"; transcript_id "MSTRG.28004.1"; exon_number "1"; scaffold_16100 StringTie exon 1472 1758 1000 . . gene_id "MSTRG.28014"; transcript_id "MSTRG.28014.1"; exon_number "1"; scaffold_16105 StringTie exon 9950 10175 1000 . . gene_id "MSTRG.28025"; transcript_id "MSTRG.28025.1"; exon_number "1"; scaffold_1611 StringTie exon 14878 16157 1000 . . gene_id "MSTRG.28032"; transcript_id "MSTRG.28032.1"; exon_number "1"; scaffold_1611 StringTie exon 106055 106101 1000 + . gene_id "MSTRG.28044"; transcript_id "MSTRG.28044.1"; exon_number "1"; scaffold_1611 StringTie exon 106222 106342 1000 + . gene_id "MSTRG.28044"; transcript_id "MSTRG.28044.1"; exon_number "2"; scaffold_1611 StringTie exon 106469 106559 1000 + . gene_id "MSTRG.28044"; transcript_id "MSTRG.28044.1"; exon_number "3"; scaffold_16117 StringTie exon 7587 7820 1000 . . gene_id "MSTRG.28060"; transcript_id "MSTRG.28060.1"; exon_number "1"; scaffold_16121 StringTie exon 2521 3188 1000 . . gene_id "MSTRG.28077"; transcript_id "MSTRG.28077.1"; exon_number "1"; scaffold_1613 StringTie exon 89513 90333 1000 + . gene_id "MSTRG.28094"; transcript_id "MSTRG.28094.2"; exon_number "1"; scaffold_1613 StringTie exon 90366 91778 1000 + . gene_id "MSTRG.28094"; transcript_id "MSTRG.28094.2"; exon_number "2"; scaffold_16145 StringTie exon 1725 1750 1000 + . gene_id "MSTRG.28131"; transcript_id "MSTRG.28131.1"; exon_number "1"; scaffold_16145 StringTie exon 4557 4956 1000 + . gene_id "MSTRG.28131"; transcript_id "MSTRG.28131.1"; exon_number "2"; scaffold_1615 StringTie exon 52230 52459 1000 . . gene_id "MSTRG.28137"; transcript_id "MSTRG.28137.1"; exon_number "1"; scaffold_16150 StringTie exon 2152 2454 1000 . . gene_id "MSTRG.28144"; transcript_id "MSTRG.28144.1"; exon_number "1"; scaffold_16151 StringTie exon 6676 6911 1000 . . gene_id "MSTRG.28145"; transcript_id "MSTRG.28145.1"; exon_number "1"; scaffold_1616 StringTie exon 55275 56381 1000 - . gene_id "MSTRG.28161"; transcript_id "MSTRG.28161.1"; exon_number "1"; scaffold_1616 StringTie exon 57350 57475 1000 - . gene_id "MSTRG.28161"; transcript_id "MSTRG.28161.1"; exon_number "2"; scaffold_1616 StringTie exon 57561 57659 1000 - . gene_id "MSTRG.28161"; transcript_id "MSTRG.28161.1"; exon_number "3"; scaffold_1616 StringTie exon 57856 57966 1000 - . gene_id "MSTRG.28161"; transcript_id "MSTRG.28161.1"; exon_number "4"; scaffold_1616 StringTie exon 58070 58164 1000 - . gene_id "MSTRG.28161"; transcript_id "MSTRG.28161.1"; exon_number "5"; scaffold_1616 StringTie exon 61778 61862 1000 - . gene_id "MSTRG.28164"; transcript_id "MSTRG.28164.1"; exon_number "1"; scaffold_1616 StringTie exon 62456 62587 1000 - . gene_id "MSTRG.28164"; transcript_id "MSTRG.28164.1"; exon_number "2"; scaffold_1616 StringTie exon 63065 63326 1000 - . gene_id "MSTRG.28164"; transcript_id "MSTRG.28164.1"; exon_number "3"; scaffold_1616 StringTie exon 63444 63523 1000 - . gene_id "MSTRG.28164"; transcript_id "MSTRG.28164.1"; exon_number "4"; scaffold_1616 StringTie exon 63647 63774 1000 - . gene_id "MSTRG.28164"; transcript_id "MSTRG.28164.1"; exon_number "5"; scaffold_1616 StringTie exon 72088 72502 1000 - . gene_id "MSTRG.28164"; transcript_id "MSTRG.28164.1"; exon_number "6"; scaffold_16181 StringTie exon 1297 1524 1000 . . gene_id "MSTRG.28217"; transcript_id "MSTRG.28217.1"; exon_number "1"; scaffold_1619 StringTie exon 4400 4610 1000 . . gene_id "MSTRG.28226"; transcript_id "MSTRG.28226.1"; exon_number "1"; scaffold_1619 StringTie exon 26275 26515 1000 . . gene_id "MSTRG.28228"; transcript_id "MSTRG.28228.1"; exon_number "1"; scaffold_162 StringTie exon 50566 52789 1000 . . gene_id "MSTRG.28244"; transcript_id "MSTRG.28244.1"; exon_number "1"; scaffold_162 StringTie exon 100217 101213 1000 . . gene_id "MSTRG.28247"; transcript_id "MSTRG.28247.1"; exon_number "1"; scaffold_162 StringTie exon 200565 200696 1000 + . gene_id "MSTRG.28270"; transcript_id "MSTRG.28270.1"; exon_number "1"; scaffold_162 StringTie exon 200954 201098 1000 + . gene_id "MSTRG.28270"; transcript_id "MSTRG.28270.1"; exon_number "2"; scaffold_162 StringTie exon 201375 202376 1000 + . gene_id "MSTRG.28270"; transcript_id "MSTRG.28270.1"; exon_number "3"; scaffold_162 StringTie exon 205985 206453 1000 + . gene_id "MSTRG.28273"; transcript_id "MSTRG.28273.1"; exon_number "1"; scaffold_162 StringTie exon 221150 221253 1000 + . gene_id "MSTRG.28273"; transcript_id "MSTRG.28273.1"; exon_number "2"; scaffold_162 StringTie exon 221507 221580 1000 + . gene_id "MSTRG.28273"; transcript_id "MSTRG.28273.1"; exon_number "3"; scaffold_162 StringTie exon 221678 221759 1000 + . gene_id "MSTRG.28273"; transcript_id "MSTRG.28273.1"; exon_number "4"; scaffold_162 StringTie exon 222047 222223 1000 + . gene_id "MSTRG.28273"; transcript_id "MSTRG.28273.1"; exon_number "5"; scaffold_162 StringTie exon 222522 222657 1000 + . gene_id "MSTRG.28273"; transcript_id "MSTRG.28273.1"; exon_number "6"; scaffold_162 StringTie exon 223039 223092 1000 + . gene_id "MSTRG.28273"; transcript_id "MSTRG.28273.1"; exon_number "7"; scaffold_162 StringTie exon 336840 337056 1000 . . gene_id "MSTRG.28283"; transcript_id "MSTRG.28283.1"; exon_number "1"; scaffold_162 StringTie exon 436833 437143 1000 . . gene_id "MSTRG.28292"; transcript_id "MSTRG.28292.1"; exon_number "1"; scaffold_162 StringTie exon 476807 477217 1000 . . gene_id "MSTRG.28295"; transcript_id "MSTRG.28295.1"; exon_number "1"; scaffold_162 StringTie exon 685125 685283 1000 + . gene_id "MSTRG.28327"; transcript_id "MSTRG.28327.1"; exon_number "1"; scaffold_162 StringTie exon 685565 685807 1000 + . gene_id "MSTRG.28327"; transcript_id "MSTRG.28327.1"; exon_number "2"; scaffold_162 StringTie exon 686018 686110 1000 + . gene_id "MSTRG.28327"; transcript_id "MSTRG.28327.1"; exon_number "3"; scaffold_162 StringTie exon 686299 686448 1000 + . gene_id "MSTRG.28327"; transcript_id "MSTRG.28327.1"; exon_number "4"; scaffold_162 StringTie exon 686690 686800 1000 + . gene_id "MSTRG.28327"; transcript_id "MSTRG.28327.1"; exon_number "5"; scaffold_162 StringTie exon 686952 687000 1000 + . gene_id "MSTRG.28327"; transcript_id "MSTRG.28327.1"; exon_number "6"; scaffold_162 StringTie exon 1108967 1109191 1000 . . gene_id "MSTRG.28366"; transcript_id "MSTRG.28366.1"; exon_number "1"; scaffold_162 StringTie exon 1281174 1282012 1000 - . gene_id "MSTRG.28376"; transcript_id "MSTRG.28376.1"; exon_number "1"; scaffold_1620 StringTie exon 97531 97886 1000 . . gene_id "MSTRG.28398"; transcript_id "MSTRG.28398.1"; exon_number "1"; scaffold_1620 StringTie exon 190293 190550 1000 . . gene_id "MSTRG.28412"; transcript_id "MSTRG.28412.1"; exon_number "1"; scaffold_16204 StringTie exon 6500 6852 1000 - . gene_id "MSTRG.28418"; transcript_id "MSTRG.28418.3"; exon_number "1"; scaffold_16204 StringTie exon 6957 7031 1000 - . gene_id "MSTRG.28418"; transcript_id "MSTRG.28418.3"; exon_number "2"; scaffold_16205 StringTie exon 3485 3568 1000 - . gene_id "MSTRG.28420"; transcript_id "MSTRG.28420.1"; exon_number "1"; scaffold_16205 StringTie exon 3832 3950 1000 - . gene_id "MSTRG.28420"; transcript_id "MSTRG.28420.1"; exon_number "2"; scaffold_16205 StringTie exon 4111 4359 1000 - . gene_id "MSTRG.28420"; transcript_id "MSTRG.28420.1"; exon_number "3"; scaffold_16205 StringTie exon 4929 5117 1000 - . gene_id "MSTRG.28420"; transcript_id "MSTRG.28420.1"; exon_number "4"; scaffold_16205 StringTie exon 7159 7343 1000 - . gene_id "MSTRG.28420"; transcript_id "MSTRG.28420.1"; exon_number "5"; scaffold_16205 StringTie exon 10134 10282 1000 - . gene_id "MSTRG.28420"; transcript_id "MSTRG.28420.1"; exon_number "6"; scaffold_1622 StringTie exon 168682 168883 1000 . . gene_id "MSTRG.28456"; transcript_id "MSTRG.28456.1"; exon_number "1"; scaffold_1623 StringTie exon 160196 161149 1000 . . gene_id "MSTRG.28476"; transcript_id "MSTRG.28476.1"; exon_number "1"; scaffold_16247 StringTie exon 753 956 1000 . . gene_id "MSTRG.28525"; transcript_id "MSTRG.28525.1"; exon_number "1"; scaffold_1625 StringTie exon 59308 59952 1000 + . gene_id "MSTRG.28536"; transcript_id "MSTRG.28536.1"; exon_number "1"; scaffold_1625 StringTie exon 60233 60318 1000 + . gene_id "MSTRG.28536"; transcript_id "MSTRG.28536.1"; exon_number "2"; scaffold_1625 StringTie exon 60423 60675 1000 + . gene_id "MSTRG.28536"; transcript_id "MSTRG.28536.1"; exon_number "3"; scaffold_1625 StringTie exon 60969 61066 1000 + . gene_id "MSTRG.28536"; transcript_id "MSTRG.28536.1"; exon_number "4"; scaffold_1625 StringTie exon 61350 61362 1000 + . gene_id "MSTRG.28536"; transcript_id "MSTRG.28536.1"; exon_number "5"; scaffold_1626 StringTie exon 123135 123569 1000 . . gene_id "MSTRG.28567"; transcript_id "MSTRG.28567.1"; exon_number "1"; scaffold_1626 StringTie exon 130770 130970 1000 . . gene_id "MSTRG.28568"; transcript_id "MSTRG.28568.1"; exon_number "1"; scaffold_16262 StringTie exon 9654 9844 1000 + . gene_id "MSTRG.28574"; transcript_id "MSTRG.28574.1"; exon_number "1"; scaffold_16262 StringTie exon 10133 10284 1000 + . gene_id "MSTRG.28574"; transcript_id "MSTRG.28574.1"; exon_number "2"; scaffold_16263 StringTie exon 8076 8300 1000 . . gene_id "MSTRG.28577"; transcript_id "MSTRG.28577.1"; exon_number "1"; scaffold_16268 StringTie exon 8747 9128 1000 . . gene_id "MSTRG.28578"; transcript_id "MSTRG.28578.1"; exon_number "1"; scaffold_16279 StringTie exon 2510 2877 1000 . . gene_id "MSTRG.28594"; transcript_id "MSTRG.28594.1"; exon_number "1"; scaffold_16280 StringTie exon 599 951 1000 . . gene_id "MSTRG.28609"; transcript_id "MSTRG.28609.1"; exon_number "1"; scaffold_16283 StringTie exon 2831 3047 1000 . . gene_id "MSTRG.28610"; transcript_id "MSTRG.28610.1"; exon_number "1"; scaffold_16286 StringTie exon 9789 10038 1000 . . gene_id "MSTRG.28616"; transcript_id "MSTRG.28616.1"; exon_number "1"; scaffold_163 StringTie exon 233433 233676 1000 . . gene_id "MSTRG.28636"; transcript_id "MSTRG.28636.1"; exon_number "1"; scaffold_163 StringTie exon 481674 481952 1000 . . gene_id "MSTRG.28645"; transcript_id "MSTRG.28645.1"; exon_number "1"; scaffold_163 StringTie exon 1082228 1082483 1000 . . gene_id "MSTRG.28674"; transcript_id "MSTRG.28674.1"; exon_number "1"; scaffold_163 StringTie exon 1353498 1353651 1000 - . gene_id "MSTRG.28694"; transcript_id "MSTRG.28694.1"; exon_number "1"; scaffold_163 StringTie exon 1353857 1353916 1000 - . gene_id "MSTRG.28694"; transcript_id "MSTRG.28694.1"; exon_number "2"; scaffold_1630 StringTie exon 82882 83161 1000 . . gene_id "MSTRG.28704"; transcript_id "MSTRG.28704.1"; exon_number "1"; scaffold_16308 StringTie exon 4537 4777 1000 . . gene_id "MSTRG.28732"; transcript_id "MSTRG.28732.1"; exon_number "1"; scaffold_1631 StringTie exon 58635 59011 1000 . . gene_id "MSTRG.28739"; transcript_id "MSTRG.28739.1"; exon_number "1"; scaffold_1632 StringTie exon 24544 24772 1000 . . gene_id "MSTRG.28755"; transcript_id "MSTRG.28755.1"; exon_number "1"; scaffold_1633 StringTie exon 70569 70809 1000 . . gene_id "MSTRG.28779"; transcript_id "MSTRG.28779.1"; exon_number "1"; scaffold_1634 StringTie exon 42278 42946 1000 . . gene_id "MSTRG.28805"; transcript_id "MSTRG.28805.1"; exon_number "1"; scaffold_1634 StringTie exon 169566 170223 1000 . . gene_id "MSTRG.28815"; transcript_id "MSTRG.28815.1"; exon_number "1"; scaffold_16346 StringTie exon 7035 7255 1000 . . gene_id "MSTRG.28821"; transcript_id "MSTRG.28821.1"; exon_number "1"; scaffold_1635 StringTie exon 15500 15782 1000 . . gene_id "MSTRG.28827"; transcript_id "MSTRG.28827.1"; exon_number "1"; scaffold_16351 StringTie exon 5541 5781 1000 . . gene_id "MSTRG.28847"; transcript_id "MSTRG.28847.1"; exon_number "1"; scaffold_1636 StringTie exon 113591 113651 1000 - . gene_id "MSTRG.28867"; transcript_id "MSTRG.28867.1"; exon_number "1"; scaffold_1636 StringTie exon 113990 114185 1000 - . gene_id "MSTRG.28867"; transcript_id "MSTRG.28867.1"; exon_number "2"; scaffold_1636 StringTie exon 121595 121888 1000 . . gene_id "MSTRG.28869"; transcript_id "MSTRG.28869.1"; exon_number "1"; scaffold_16363 StringTie exon 9558 9776 1000 . . gene_id "MSTRG.28877"; transcript_id "MSTRG.28877.1"; exon_number "1"; scaffold_1637 StringTie exon 49954 50058 1000 + . gene_id "MSTRG.28884"; transcript_id "MSTRG.28884.1"; exon_number "1"; scaffold_1637 StringTie exon 50585 50653 1000 + . gene_id "MSTRG.28884"; transcript_id "MSTRG.28884.1"; exon_number "2"; scaffold_1637 StringTie exon 51193 51517 1000 + . gene_id "MSTRG.28884"; transcript_id "MSTRG.28884.1"; exon_number "3"; scaffold_16378 StringTie exon 2031 2317 1000 . . gene_id "MSTRG.28904"; transcript_id "MSTRG.28904.1"; exon_number "1"; scaffold_1638 StringTie exon 185819 185961 1000 + . gene_id "MSTRG.28938"; transcript_id "MSTRG.28938.1"; exon_number "1"; scaffold_1638 StringTie exon 186288 186419 1000 + . gene_id "MSTRG.28938"; transcript_id "MSTRG.28938.1"; exon_number "2"; scaffold_1638 StringTie exon 186679 187057 1000 + . gene_id "MSTRG.28938"; transcript_id "MSTRG.28938.1"; exon_number "3"; scaffold_164 StringTie exon 162555 162733 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "1"; scaffold_164 StringTie exon 177033 177140 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "2"; scaffold_164 StringTie exon 177469 177529 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "3"; scaffold_164 StringTie exon 182167 182219 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "4"; scaffold_164 StringTie exon 184971 185111 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "5"; scaffold_164 StringTie exon 186214 186335 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "6"; scaffold_164 StringTie exon 191308 191476 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "7"; scaffold_164 StringTie exon 193209 193331 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "8"; scaffold_164 StringTie exon 198412 198487 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "9"; scaffold_164 StringTie exon 198998 199102 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "10"; scaffold_164 StringTie exon 207224 207276 1000 + . gene_id "MSTRG.29007"; transcript_id "MSTRG.29007.1"; exon_number "11"; scaffold_164 StringTie exon 264202 264264 1000 + . gene_id "MSTRG.29013"; transcript_id "MSTRG.29013.1"; exon_number "1"; scaffold_164 StringTie exon 276512 276571 1000 + . gene_id "MSTRG.29013"; transcript_id "MSTRG.29013.1"; exon_number "2"; scaffold_164 StringTie exon 276983 277092 1000 + . gene_id "MSTRG.29013"; transcript_id "MSTRG.29013.1"; exon_number "3"; scaffold_164 StringTie exon 278579 278717 1000 + . gene_id "MSTRG.29013"; transcript_id "MSTRG.29013.1"; exon_number "4"; scaffold_164 StringTie exon 294282 294493 1000 . . gene_id "MSTRG.29018"; transcript_id "MSTRG.29018.1"; exon_number "1"; scaffold_164 StringTie exon 360181 360384 1000 . . gene_id "MSTRG.29022"; transcript_id "MSTRG.29022.1"; exon_number "1"; scaffold_164 StringTie exon 782134 782154 1000 + . gene_id "MSTRG.29058"; transcript_id "MSTRG.29058.1"; exon_number "1"; scaffold_164 StringTie exon 784277 784704 1000 + . gene_id "MSTRG.29058"; transcript_id "MSTRG.29058.1"; exon_number "2"; scaffold_164 StringTie exon 913072 913567 1000 - . gene_id "MSTRG.29072"; transcript_id "MSTRG.29072.1"; exon_number "1"; scaffold_164 StringTie exon 914071 914204 1000 - . gene_id "MSTRG.29072"; transcript_id "MSTRG.29072.1"; exon_number "2"; scaffold_164 StringTie exon 975538 975818 1000 . . gene_id "MSTRG.29079"; transcript_id "MSTRG.29079.1"; exon_number "1"; scaffold_164 StringTie exon 1031695 1031921 1000 . . gene_id "MSTRG.29086"; transcript_id "MSTRG.29086.1"; exon_number "1"; scaffold_1640 StringTie exon 2055 5961 1000 . . gene_id "MSTRG.29105"; transcript_id "MSTRG.29105.1"; exon_number "1"; scaffold_1640 StringTie exon 25642 25738 1000 + . gene_id "MSTRG.29108"; transcript_id "MSTRG.29108.1"; exon_number "1"; scaffold_1640 StringTie exon 26008 26262 1000 + . gene_id "MSTRG.29108"; transcript_id "MSTRG.29108.1"; exon_number "2"; scaffold_1640 StringTie exon 27213 27302 1000 + . gene_id "MSTRG.29108"; transcript_id "MSTRG.29108.1"; exon_number "3"; scaffold_1640 StringTie exon 27552 27986 1000 + . gene_id "MSTRG.29108"; transcript_id "MSTRG.29108.1"; exon_number "4"; scaffold_1640 StringTie exon 90718 91201 1000 . . gene_id "MSTRG.29114"; transcript_id "MSTRG.29114.1"; exon_number "1"; scaffold_1641 StringTie exon 35332 36185 1000 . . gene_id "MSTRG.29128"; transcript_id "MSTRG.29128.1"; exon_number "1"; scaffold_1641 StringTie exon 179956 180202 1000 . . gene_id "MSTRG.29137"; transcript_id "MSTRG.29137.1"; exon_number "1"; scaffold_16413 StringTie exon 740 940 1000 . . gene_id "MSTRG.29141"; transcript_id "MSTRG.29141.1"; exon_number "1"; scaffold_1643 StringTie exon 179601 181518 1000 . . gene_id "MSTRG.29176"; transcript_id "MSTRG.29176.1"; exon_number "1"; scaffold_16435 StringTie exon 70 672 1000 . . gene_id "MSTRG.29180"; transcript_id "MSTRG.29180.1"; exon_number "1"; scaffold_16440 StringTie exon 7177 10236 1000 . . gene_id "MSTRG.29195"; transcript_id "MSTRG.29195.1"; exon_number "1"; scaffold_1645 StringTie exon 5890 6003 1000 + . gene_id "MSTRG.29203"; transcript_id "MSTRG.29203.1"; exon_number "1"; scaffold_1645 StringTie exon 6442 6617 1000 + . gene_id "MSTRG.29203"; transcript_id "MSTRG.29203.1"; exon_number "2"; scaffold_1645 StringTie exon 6881 6956 1000 + . gene_id "MSTRG.29203"; transcript_id "MSTRG.29203.1"; exon_number "3"; scaffold_1645 StringTie exon 70971 71202 1000 . . gene_id "MSTRG.29205"; transcript_id "MSTRG.29205.1"; exon_number "1"; scaffold_1645 StringTie exon 148325 148424 1000 + . gene_id "MSTRG.29217"; transcript_id "MSTRG.29217.2"; exon_number "1"; scaffold_1645 StringTie exon 159121 159224 1000 + . gene_id "MSTRG.29217"; transcript_id "MSTRG.29217.2"; exon_number "2"; scaffold_1645 StringTie exon 159370 159441 1000 + . gene_id "MSTRG.29217"; transcript_id "MSTRG.29217.2"; exon_number "3"; scaffold_1645 StringTie exon 161570 161683 1000 + . gene_id "MSTRG.29217"; transcript_id "MSTRG.29217.2"; exon_number "4"; scaffold_1645 StringTie exon 164862 164958 1000 + . gene_id "MSTRG.29217"; transcript_id "MSTRG.29217.2"; exon_number "5"; scaffold_1645 StringTie exon 170069 170215 1000 + . gene_id "MSTRG.29220"; transcript_id "MSTRG.29220.1"; exon_number "1"; scaffold_1645 StringTie exon 170491 170601 1000 + . gene_id "MSTRG.29220"; transcript_id "MSTRG.29220.1"; exon_number "2"; scaffold_1645 StringTie exon 170931 170984 1000 + . gene_id "MSTRG.29220"; transcript_id "MSTRG.29220.1"; exon_number "3"; scaffold_1645 StringTie exon 171083 171230 1000 + . gene_id "MSTRG.29220"; transcript_id "MSTRG.29220.1"; exon_number "4"; scaffold_1646 StringTie exon 92294 92795 1000 . . gene_id "MSTRG.29244"; transcript_id "MSTRG.29244.1"; exon_number "1"; scaffold_1646 StringTie exon 157338 157580 1000 . . gene_id "MSTRG.29253"; transcript_id "MSTRG.29253.1"; exon_number "1"; scaffold_1647 StringTie exon 187843 189105 1000 - . gene_id "MSTRG.29284"; transcript_id "MSTRG.29284.1"; exon_number "1"; scaffold_1647 StringTie exon 189235 189346 1000 - . gene_id "MSTRG.29284"; transcript_id "MSTRG.29284.1"; exon_number "2"; scaffold_1647 StringTie exon 189448 189754 1000 - . gene_id "MSTRG.29284"; transcript_id "MSTRG.29284.1"; exon_number "3"; scaffold_16477 StringTie exon 3178 3417 1000 . . gene_id "MSTRG.29290"; transcript_id "MSTRG.29290.1"; exon_number "1"; scaffold_1648 StringTie exon 16861 17199 1000 . . gene_id "MSTRG.29293"; transcript_id "MSTRG.29293.1"; exon_number "1"; scaffold_1648 StringTie exon 18145 18451 1000 . . gene_id "MSTRG.29294"; transcript_id "MSTRG.29294.1"; exon_number "1"; scaffold_1648 StringTie exon 101427 101606 1000 - . gene_id "MSTRG.29305"; transcript_id "MSTRG.29305.1"; exon_number "1"; scaffold_1648 StringTie exon 101767 102022 1000 - . gene_id "MSTRG.29305"; transcript_id "MSTRG.29305.1"; exon_number "2"; scaffold_1648 StringTie exon 103117 103344 1000 - . gene_id "MSTRG.29305"; transcript_id "MSTRG.29305.1"; exon_number "3"; scaffold_1648 StringTie exon 103735 103920 1000 - . gene_id "MSTRG.29305"; transcript_id "MSTRG.29305.1"; exon_number "4"; scaffold_1648 StringTie exon 104014 104154 1000 - . gene_id "MSTRG.29305"; transcript_id "MSTRG.29305.1"; exon_number "5"; scaffold_1648 StringTie exon 107752 107827 1000 - . gene_id "MSTRG.29305"; transcript_id "MSTRG.29305.1"; exon_number "6"; scaffold_1648 StringTie exon 171770 171980 1000 . . gene_id "MSTRG.29306"; transcript_id "MSTRG.29306.1"; exon_number "1"; scaffold_16486 StringTie exon 8167 8613 1000 . . gene_id "MSTRG.29314"; transcript_id "MSTRG.29314.1"; exon_number "1"; scaffold_1649 StringTie exon 183643 183971 1000 . . gene_id "MSTRG.29328"; transcript_id "MSTRG.29328.1"; exon_number "1"; scaffold_165 StringTie exon 263145 263420 1000 . . gene_id "MSTRG.29362"; transcript_id "MSTRG.29362.1"; exon_number "1"; scaffold_165 StringTie exon 616221 616489 1000 . . gene_id "MSTRG.29386"; transcript_id "MSTRG.29386.1"; exon_number "1"; scaffold_165 StringTie exon 1117598 1117833 1000 . . gene_id "MSTRG.29402"; transcript_id "MSTRG.29402.1"; exon_number "1"; scaffold_165 StringTie exon 1262565 1262803 1000 . . gene_id "MSTRG.29411"; transcript_id "MSTRG.29411.1"; exon_number "1"; scaffold_1650 StringTie exon 58013 58082 1000 + . gene_id "MSTRG.29433"; transcript_id "MSTRG.29433.1"; exon_number "1"; scaffold_1650 StringTie exon 58559 58688 1000 + . gene_id "MSTRG.29433"; transcript_id "MSTRG.29433.1"; exon_number "2"; scaffold_1650 StringTie exon 179464 179664 1000 . . gene_id "MSTRG.29439"; transcript_id "MSTRG.29439.1"; exon_number "1"; scaffold_1650 StringTie exon 189422 189648 1000 . . gene_id "MSTRG.29440"; transcript_id "MSTRG.29440.1"; exon_number "1"; scaffold_1652 StringTie exon 171220 171986 1000 . . gene_id "MSTRG.29476"; transcript_id "MSTRG.29476.1"; exon_number "1"; scaffold_16541 StringTie exon 6566 6779 1000 . . gene_id "MSTRG.29507"; transcript_id "MSTRG.29507.1"; exon_number "1"; scaffold_16546 StringTie exon 1057 1327 1000 . . gene_id "MSTRG.29509"; transcript_id "MSTRG.29509.1"; exon_number "1"; scaffold_1655 StringTie exon 106002 106262 1000 . . gene_id "MSTRG.29525"; transcript_id "MSTRG.29525.1"; exon_number "1"; scaffold_16555 StringTie exon 4 827 1000 . . gene_id "MSTRG.29538"; transcript_id "MSTRG.29538.1"; exon_number "1"; scaffold_1656 StringTie exon 18955 19512 1000 . . gene_id "MSTRG.29546"; transcript_id "MSTRG.29546.1"; exon_number "1"; scaffold_1656 StringTie exon 149283 149686 1000 + . gene_id "MSTRG.29556"; transcript_id "MSTRG.29556.1"; exon_number "1"; scaffold_16562 StringTie exon 18 429 1000 . . gene_id "MSTRG.29559"; transcript_id "MSTRG.29559.1"; exon_number "1"; scaffold_1657 StringTie exon 156415 156620 1000 . . gene_id "MSTRG.29573"; transcript_id "MSTRG.29573.1"; exon_number "1"; scaffold_16580 StringTie exon 8985 9099 1000 + . gene_id "MSTRG.29595"; transcript_id "MSTRG.29595.1"; exon_number "1"; scaffold_16580 StringTie exon 9258 10102 1000 + . gene_id "MSTRG.29595"; transcript_id "MSTRG.29595.1"; exon_number "2"; scaffold_1659 StringTie exon 162302 162588 1000 . . gene_id "MSTRG.29622"; transcript_id "MSTRG.29622.1"; exon_number "1"; scaffold_16598 StringTie exon 348 439 1000 - . gene_id "MSTRG.29633"; transcript_id "MSTRG.29633.1"; exon_number "1"; scaffold_16598 StringTie exon 2461 2523 1000 - . gene_id "MSTRG.29633"; transcript_id "MSTRG.29633.1"; exon_number "2"; scaffold_16598 StringTie exon 2655 2722 1000 - . gene_id "MSTRG.29633"; transcript_id "MSTRG.29633.1"; exon_number "3"; scaffold_16598 StringTie exon 3289 3472 1000 - . gene_id "MSTRG.29633"; transcript_id "MSTRG.29633.1"; exon_number "4"; scaffold_16598 StringTie exon 3594 3666 1000 - . gene_id "MSTRG.29633"; transcript_id "MSTRG.29633.1"; exon_number "5"; scaffold_16598 StringTie exon 3897 3950 1000 - . gene_id "MSTRG.29633"; transcript_id "MSTRG.29633.1"; exon_number "6"; scaffold_166 StringTie exon 501169 501210 1000 + . gene_id "MSTRG.29663"; transcript_id "MSTRG.29663.1"; exon_number "1"; scaffold_166 StringTie exon 501558 501664 1000 + . gene_id "MSTRG.29663"; transcript_id "MSTRG.29663.1"; exon_number "2"; scaffold_166 StringTie exon 503052 503120 1000 + . gene_id "MSTRG.29663"; transcript_id "MSTRG.29663.1"; exon_number "3"; scaffold_166 StringTie exon 503129 503145 1000 + . gene_id "MSTRG.29664"; transcript_id "MSTRG.29664.1"; exon_number "1"; scaffold_166 StringTie exon 503236 503323 1000 + . gene_id "MSTRG.29664"; transcript_id "MSTRG.29664.1"; exon_number "2"; scaffold_166 StringTie exon 503645 503990 1000 + . gene_id "MSTRG.29664"; transcript_id "MSTRG.29664.1"; exon_number "3"; scaffold_166 StringTie exon 693569 694004 1000 + . gene_id "MSTRG.29694"; transcript_id "MSTRG.29694.1"; exon_number "1"; scaffold_166 StringTie exon 694392 694426 1000 + . gene_id "MSTRG.29694"; transcript_id "MSTRG.29694.1"; exon_number "2"; scaffold_166 StringTie exon 694736 694835 1000 + . gene_id "MSTRG.29694"; transcript_id "MSTRG.29694.1"; exon_number "3"; scaffold_166 StringTie exon 695324 695477 1000 + . gene_id "MSTRG.29694"; transcript_id "MSTRG.29694.1"; exon_number "4"; scaffold_166 StringTie exon 695585 695703 1000 + . gene_id "MSTRG.29694"; transcript_id "MSTRG.29694.1"; exon_number "5"; scaffold_166 StringTie exon 695924 696012 1000 + . gene_id "MSTRG.29694"; transcript_id "MSTRG.29694.1"; exon_number "6"; scaffold_166 StringTie exon 696099 696351 1000 + . gene_id "MSTRG.29694"; transcript_id "MSTRG.29694.1"; exon_number "7"; scaffold_166 StringTie exon 731478 731577 1000 + . gene_id "MSTRG.29702"; transcript_id "MSTRG.29702.1"; exon_number "1"; scaffold_166 StringTie exon 731779 731849 1000 + . gene_id "MSTRG.29702"; transcript_id "MSTRG.29702.1"; exon_number "2"; scaffold_166 StringTie exon 731934 731966 1000 + . gene_id "MSTRG.29702"; transcript_id "MSTRG.29702.1"; exon_number "3"; scaffold_166 StringTie exon 899215 899530 1000 . . gene_id "MSTRG.29715"; transcript_id "MSTRG.29715.1"; exon_number "1"; scaffold_1660 StringTie exon 29450 29579 1000 - . gene_id "MSTRG.29730"; transcript_id "MSTRG.29730.1"; exon_number "1"; scaffold_1660 StringTie exon 29625 29735 1000 - . gene_id "MSTRG.29730"; transcript_id "MSTRG.29730.1"; exon_number "2"; scaffold_16602 StringTie exon 7207 7415 1000 . . gene_id "MSTRG.29743"; transcript_id "MSTRG.29743.1"; exon_number "1"; scaffold_1662 StringTie exon 24395 24747 1000 . . gene_id "MSTRG.29771"; transcript_id "MSTRG.29771.1"; exon_number "1"; scaffold_1662 StringTie exon 89342 89353 1000 - . gene_id "MSTRG.29781"; transcript_id "MSTRG.29781.1"; exon_number "1"; scaffold_1662 StringTie exon 152032 153817 1000 - . gene_id "MSTRG.29781"; transcript_id "MSTRG.29781.1"; exon_number "2"; scaffold_16623 StringTie exon 4037 4049 1000 - . gene_id "MSTRG.29791"; transcript_id "MSTRG.29791.1"; exon_number "1"; scaffold_16623 StringTie exon 4333 4444 1000 - . gene_id "MSTRG.29791"; transcript_id "MSTRG.29791.1"; exon_number "2"; scaffold_16623 StringTie exon 4807 4988 1000 - . gene_id "MSTRG.29791"; transcript_id "MSTRG.29791.1"; exon_number "3"; scaffold_16623 StringTie exon 5337 5453 1000 - . gene_id "MSTRG.29791"; transcript_id "MSTRG.29791.1"; exon_number "4"; scaffold_16623 StringTie exon 5620 5734 1000 - . gene_id "MSTRG.29791"; transcript_id "MSTRG.29791.1"; exon_number "5"; scaffold_16623 StringTie exon 6105 6249 1000 - . gene_id "MSTRG.29791"; transcript_id "MSTRG.29791.1"; exon_number "6"; scaffold_1663 StringTie exon 186048 189019 1000 . . gene_id "MSTRG.29805"; transcript_id "MSTRG.29805.1"; exon_number "1"; scaffold_16632 StringTie exon 9154 9395 1000 . . gene_id "MSTRG.29808"; transcript_id "MSTRG.29808.1"; exon_number "1"; scaffold_16634 StringTie exon 2707 3217 1000 . . gene_id "MSTRG.29810"; transcript_id "MSTRG.29810.1"; exon_number "1"; scaffold_1665 StringTie exon 97473 97811 1000 . . gene_id "MSTRG.29845"; transcript_id "MSTRG.29845.1"; exon_number "1"; scaffold_16651 StringTie exon 1978 2330 1000 . . gene_id "MSTRG.29849"; transcript_id "MSTRG.29849.1"; exon_number "1"; scaffold_16654 StringTie exon 1388 1612 1000 . . gene_id "MSTRG.29851"; transcript_id "MSTRG.29851.1"; exon_number "1"; scaffold_1666 StringTie exon 8501 8823 1000 . . gene_id "MSTRG.29856"; transcript_id "MSTRG.29856.1"; exon_number "1"; scaffold_16671 StringTie exon 915 2465 1000 . . gene_id "MSTRG.29878"; transcript_id "MSTRG.29878.1"; exon_number "1"; scaffold_16671 StringTie exon 9621 10004 1000 . . gene_id "MSTRG.29881"; transcript_id "MSTRG.29881.1"; exon_number "1"; scaffold_16688 StringTie exon 8616 8849 1000 . . gene_id "MSTRG.29902"; transcript_id "MSTRG.29902.1"; exon_number "1"; scaffold_1669 StringTie exon 10834 11043 1000 . . gene_id "MSTRG.29907"; transcript_id "MSTRG.29907.1"; exon_number "1"; scaffold_1669 StringTie exon 49455 49751 1000 . . gene_id "MSTRG.29908"; transcript_id "MSTRG.29908.1"; exon_number "1"; scaffold_1669 StringTie exon 69953 70003 1000 + . gene_id "MSTRG.29912"; transcript_id "MSTRG.29912.2"; exon_number "1"; scaffold_1669 StringTie exon 70541 70758 1000 + . gene_id "MSTRG.29912"; transcript_id "MSTRG.29912.2"; exon_number "2"; scaffold_1669 StringTie exon 72095 72288 1000 + . gene_id "MSTRG.29912"; transcript_id "MSTRG.29912.2"; exon_number "3"; scaffold_1669 StringTie exon 72843 73015 1000 + . gene_id "MSTRG.29912"; transcript_id "MSTRG.29912.2"; exon_number "4"; scaffold_1669 StringTie exon 73139 73199 1000 + . gene_id "MSTRG.29912"; transcript_id "MSTRG.29912.2"; exon_number "5"; scaffold_1669 StringTie exon 73569 73660 1000 + . gene_id "MSTRG.29912"; transcript_id "MSTRG.29912.2"; exon_number "6"; scaffold_1669 StringTie exon 73860 73967 1000 + . gene_id "MSTRG.29912"; transcript_id "MSTRG.29912.2"; exon_number "7"; scaffold_1669 StringTie exon 74851 75365 1000 + . gene_id "MSTRG.29912"; transcript_id "MSTRG.29912.2"; exon_number "8"; scaffold_1669 StringTie exon 97503 97766 1000 . . gene_id "MSTRG.29916"; transcript_id "MSTRG.29916.1"; exon_number "1"; scaffold_167 StringTie exon 94105 94486 1000 . . gene_id "MSTRG.29937"; transcript_id "MSTRG.29937.1"; exon_number "1"; scaffold_167 StringTie exon 169410 169576 1000 - . gene_id "MSTRG.29945"; transcript_id "MSTRG.29945.1"; exon_number "1"; scaffold_167 StringTie exon 169812 169958 1000 - . gene_id "MSTRG.29945"; transcript_id "MSTRG.29945.1"; exon_number "2"; scaffold_167 StringTie exon 554838 555608 1000 . . gene_id "MSTRG.29963"; transcript_id "MSTRG.29963.1"; exon_number "1"; scaffold_167 StringTie exon 780355 780613 1000 . . gene_id "MSTRG.29972"; transcript_id "MSTRG.29972.1"; exon_number "1"; scaffold_167 StringTie exon 1130467 1130686 1000 . . gene_id "MSTRG.29992"; transcript_id "MSTRG.29992.1"; exon_number "1"; scaffold_1670 StringTie exon 43125 43399 1000 . . gene_id "MSTRG.30020"; transcript_id "MSTRG.30020.1"; exon_number "1"; scaffold_1670 StringTie exon 181996 182327 1000 . . gene_id "MSTRG.30034"; transcript_id "MSTRG.30034.1"; exon_number "1"; scaffold_16706 StringTie exon 3481 3676 1000 - . gene_id "MSTRG.30039"; transcript_id "MSTRG.30039.1"; exon_number "1"; scaffold_16706 StringTie exon 3761 3810 1000 - . gene_id "MSTRG.30039"; transcript_id "MSTRG.30039.1"; exon_number "2"; scaffold_1671 StringTie exon 487 703 1000 + . gene_id "MSTRG.30044"; transcript_id "MSTRG.30044.1"; exon_number "1"; scaffold_1671 StringTie exon 1567 1677 1000 + . gene_id "MSTRG.30044"; transcript_id "MSTRG.30044.1"; exon_number "2"; scaffold_1671 StringTie exon 3911 4015 1000 + . gene_id "MSTRG.30044"; transcript_id "MSTRG.30044.1"; exon_number "3"; scaffold_1671 StringTie exon 4181 4810 1000 + . gene_id "MSTRG.30044"; transcript_id "MSTRG.30044.1"; exon_number "4"; scaffold_1671 StringTie exon 30992 33440 1000 . . gene_id "MSTRG.30051"; transcript_id "MSTRG.30051.1"; exon_number "1"; scaffold_16710 StringTie exon 1838 2172 1000 . . gene_id "MSTRG.30063"; transcript_id "MSTRG.30063.1"; exon_number "1"; scaffold_16740 StringTie exon 9561 9908 1000 . . gene_id "MSTRG.30134"; transcript_id "MSTRG.30134.1"; exon_number "1"; scaffold_16744 StringTie exon 5523 5858 1000 + . gene_id "MSTRG.30143"; transcript_id "MSTRG.30143.1"; exon_number "1"; scaffold_16744 StringTie exon 8784 8885 1000 + . gene_id "MSTRG.30143"; transcript_id "MSTRG.30143.1"; exon_number "2"; scaffold_1675 StringTie exon 96949 97277 1000 . . gene_id "MSTRG.30160"; transcript_id "MSTRG.30160.1"; exon_number "1"; scaffold_1676 StringTie exon 43444 43980 1000 - . gene_id "MSTRG.30185"; transcript_id "MSTRG.30185.1"; exon_number "1"; scaffold_1676 StringTie exon 44203 44358 1000 - . gene_id "MSTRG.30185"; transcript_id "MSTRG.30185.1"; exon_number "2"; scaffold_1676 StringTie exon 44508 44650 1000 - . gene_id "MSTRG.30185"; transcript_id "MSTRG.30185.1"; exon_number "3"; scaffold_1676 StringTie exon 45354 45371 1000 - . gene_id "MSTRG.30185"; transcript_id "MSTRG.30185.1"; exon_number "4"; scaffold_16761 StringTie exon 8856 9073 1000 - . gene_id "MSTRG.30199"; transcript_id "MSTRG.30199.1"; exon_number "1"; scaffold_1677 StringTie exon 92859 92903 1000 - . gene_id "MSTRG.30210"; transcript_id "MSTRG.30210.1"; exon_number "1"; scaffold_1677 StringTie exon 93177 93270 1000 - . gene_id "MSTRG.30210"; transcript_id "MSTRG.30210.1"; exon_number "2"; scaffold_1677 StringTie exon 93601 93654 1000 - . gene_id "MSTRG.30210"; transcript_id "MSTRG.30210.1"; exon_number "3"; scaffold_1677 StringTie exon 93780 93951 1000 - . gene_id "MSTRG.30210"; transcript_id "MSTRG.30210.1"; exon_number "4"; scaffold_1678 StringTie exon 101397 101550 1000 + . gene_id "MSTRG.30222"; transcript_id "MSTRG.30222.1"; exon_number "1"; scaffold_1678 StringTie exon 156427 156626 1000 + . gene_id "MSTRG.30222"; transcript_id "MSTRG.30222.1"; exon_number "2"; scaffold_1678 StringTie exon 158529 158617 1000 + . gene_id "MSTRG.30222"; transcript_id "MSTRG.30222.1"; exon_number "3"; scaffold_1678 StringTie exon 184809 184911 1000 + . gene_id "MSTRG.30222"; transcript_id "MSTRG.30222.1"; exon_number "4"; scaffold_16786 StringTie exon 6128 6330 1000 . . gene_id "MSTRG.30231"; transcript_id "MSTRG.30231.1"; exon_number "1"; scaffold_1679 StringTie exon 24914 25098 1000 + . gene_id "MSTRG.30242"; transcript_id "MSTRG.30242.1"; exon_number "1"; scaffold_1679 StringTie exon 27521 27618 1000 + . gene_id "MSTRG.30242"; transcript_id "MSTRG.30242.1"; exon_number "2"; scaffold_1679 StringTie exon 182175 182537 1000 . . gene_id "MSTRG.30252"; transcript_id "MSTRG.30252.1"; exon_number "1"; scaffold_16795 StringTie exon 5151 6726 1000 . . gene_id "MSTRG.30261"; transcript_id "MSTRG.30261.1"; exon_number "1"; scaffold_168 StringTie exon 324300 324582 1000 . . gene_id "MSTRG.30281"; transcript_id "MSTRG.30281.1"; exon_number "1"; scaffold_168 StringTie exon 549104 549373 1000 . . gene_id "MSTRG.30287"; transcript_id "MSTRG.30287.1"; exon_number "1"; scaffold_168 StringTie exon 762134 762256 1000 + . gene_id "MSTRG.30291"; transcript_id "MSTRG.30291.1"; exon_number "1"; scaffold_168 StringTie exon 762863 762984 1000 + . gene_id "MSTRG.30291"; transcript_id "MSTRG.30291.1"; exon_number "2"; scaffold_168 StringTie exon 763149 763281 1000 + . gene_id "MSTRG.30291"; transcript_id "MSTRG.30291.1"; exon_number "3"; scaffold_168 StringTie exon 764718 764825 1000 + . gene_id "MSTRG.30291"; transcript_id "MSTRG.30291.1"; exon_number "4"; scaffold_168 StringTie exon 765828 765926 1000 + . gene_id "MSTRG.30291"; transcript_id "MSTRG.30291.1"; exon_number "5"; scaffold_168 StringTie exon 824065 824377 1000 . . gene_id "MSTRG.30294"; transcript_id "MSTRG.30294.1"; exon_number "1"; scaffold_1682 StringTie exon 60256 60490 1000 . . gene_id "MSTRG.30366"; transcript_id "MSTRG.30366.1"; exon_number "1"; scaffold_16828 StringTie exon 8226 8446 1000 + . gene_id "MSTRG.30385"; transcript_id "MSTRG.30385.1"; exon_number "1"; scaffold_1683 StringTie exon 45965 46179 1000 . . gene_id "MSTRG.30397"; transcript_id "MSTRG.30397.1"; exon_number "1"; scaffold_16866 StringTie exon 2275 2670 1000 . . gene_id "MSTRG.30465"; transcript_id "MSTRG.30465.1"; exon_number "1"; scaffold_1687 StringTie exon 17294 17525 1000 . . gene_id "MSTRG.30470"; transcript_id "MSTRG.30470.1"; exon_number "1"; scaffold_1688 StringTie exon 16395 16501 1000 - . gene_id "MSTRG.30499"; transcript_id "MSTRG.30499.3"; exon_number "1"; scaffold_1688 StringTie exon 16631 16817 1000 - . gene_id "MSTRG.30499"; transcript_id "MSTRG.30499.3"; exon_number "2"; scaffold_1688 StringTie exon 17077 17183 1000 - . gene_id "MSTRG.30499"; transcript_id "MSTRG.30499.3"; exon_number "3"; scaffold_1688 StringTie exon 17690 17857 1000 - . gene_id "MSTRG.30499"; transcript_id "MSTRG.30499.3"; exon_number "4"; scaffold_1688 StringTie exon 18085 18193 1000 - . gene_id "MSTRG.30499"; transcript_id "MSTRG.30499.3"; exon_number "5"; scaffold_1688 StringTie exon 18275 18339 1000 - . gene_id "MSTRG.30499"; transcript_id "MSTRG.30499.3"; exon_number "6"; scaffold_1688 StringTie exon 18438 18605 1000 - . gene_id "MSTRG.30499"; transcript_id "MSTRG.30499.3"; exon_number "7"; scaffold_1688 StringTie exon 18741 18963 1000 - . gene_id "MSTRG.30499"; transcript_id "MSTRG.30499.3"; exon_number "8"; scaffold_1688 StringTie exon 98990 99408 1000 . . gene_id "MSTRG.30502"; transcript_id "MSTRG.30502.1"; exon_number "1"; scaffold_169 StringTie exon 13342 13447 1000 + . gene_id "MSTRG.30526"; transcript_id "MSTRG.30526.1"; exon_number "1"; scaffold_169 StringTie exon 14580 14837 1000 + . gene_id "MSTRG.30526"; transcript_id "MSTRG.30526.1"; exon_number "2"; scaffold_169 StringTie exon 16226 16445 1000 + . gene_id "MSTRG.30528"; transcript_id "MSTRG.30528.1"; exon_number "1"; scaffold_169 StringTie exon 16681 16815 1000 + . gene_id "MSTRG.30528"; transcript_id "MSTRG.30528.1"; exon_number "2"; scaffold_169 StringTie exon 306981 307734 1000 . . gene_id "MSTRG.30563"; transcript_id "MSTRG.30563.1"; exon_number "1"; scaffold_169 StringTie exon 466326 466588 1000 . . gene_id "MSTRG.30568"; transcript_id "MSTRG.30568.1"; exon_number "1"; scaffold_169 StringTie exon 584043 584403 1000 . . gene_id "MSTRG.30574"; transcript_id "MSTRG.30574.1"; exon_number "1"; scaffold_169 StringTie exon 784947 785052 1000 + . gene_id "MSTRG.30581"; transcript_id "MSTRG.30581.1"; exon_number "1"; scaffold_169 StringTie exon 785180 785270 1000 + . gene_id "MSTRG.30581"; transcript_id "MSTRG.30581.1"; exon_number "2"; scaffold_169 StringTie exon 785482 785521 1000 + . gene_id "MSTRG.30581"; transcript_id "MSTRG.30581.1"; exon_number "3"; scaffold_169 StringTie exon 849247 849647 1000 . . gene_id "MSTRG.30591"; transcript_id "MSTRG.30591.1"; exon_number "1"; scaffold_1690 StringTie exon 123964 124290 1000 . . gene_id "MSTRG.30632"; transcript_id "MSTRG.30632.1"; exon_number "1"; scaffold_1691 StringTie exon 113951 114591 1000 . . gene_id "MSTRG.30648"; transcript_id "MSTRG.30648.1"; exon_number "1"; scaffold_1691 StringTie exon 156376 156561 1000 + . gene_id "MSTRG.30651"; transcript_id "MSTRG.30651.1"; exon_number "1"; scaffold_1691 StringTie exon 156665 156767 1000 + . gene_id "MSTRG.30651"; transcript_id "MSTRG.30651.1"; exon_number "2"; scaffold_1691 StringTie exon 156867 157022 1000 + . gene_id "MSTRG.30651"; transcript_id "MSTRG.30651.1"; exon_number "3"; scaffold_1691 StringTie exon 157184 157332 1000 + . gene_id "MSTRG.30651"; transcript_id "MSTRG.30651.1"; exon_number "4"; scaffold_1691 StringTie exon 157469 157583 1000 + . gene_id "MSTRG.30651"; transcript_id "MSTRG.30651.1"; exon_number "5"; scaffold_1692 StringTie exon 2400 2520 1000 - . gene_id "MSTRG.30671"; transcript_id "MSTRG.30671.1"; exon_number "1"; scaffold_1692 StringTie exon 2797 2885 1000 - . gene_id "MSTRG.30671"; transcript_id "MSTRG.30671.1"; exon_number "2"; scaffold_1692 StringTie exon 31908 32132 1000 . . gene_id "MSTRG.30675"; transcript_id "MSTRG.30675.1"; exon_number "1"; scaffold_1692 StringTie exon 115638 115863 1000 . . gene_id "MSTRG.30682"; transcript_id "MSTRG.30682.1"; exon_number "1"; scaffold_16924 StringTie exon 1030 1254 1000 . . gene_id "MSTRG.30688"; transcript_id "MSTRG.30688.1"; exon_number "1"; scaffold_1693 StringTie exon 93708 93916 1000 . . gene_id "MSTRG.30700"; transcript_id "MSTRG.30700.1"; exon_number "1"; scaffold_16933 StringTie exon 127 288 1000 - . gene_id "MSTRG.30713"; transcript_id "MSTRG.30713.1"; exon_number "1"; scaffold_16933 StringTie exon 376 477 1000 - . gene_id "MSTRG.30713"; transcript_id "MSTRG.30713.1"; exon_number "2"; scaffold_16933 StringTie exon 1333 1473 1000 - . gene_id "MSTRG.30713"; transcript_id "MSTRG.30713.1"; exon_number "3"; scaffold_1695 StringTie exon 86947 87233 1000 . . gene_id "MSTRG.30748"; transcript_id "MSTRG.30748.1"; exon_number "1"; scaffold_1696 StringTie exon 25351 25462 1000 - . gene_id "MSTRG.30770"; transcript_id "MSTRG.30770.1"; exon_number "1"; scaffold_1696 StringTie exon 25606 25705 1000 - . gene_id "MSTRG.30770"; transcript_id "MSTRG.30770.1"; exon_number "2"; scaffold_1696 StringTie exon 113756 113880 1000 + . gene_id "MSTRG.30775"; transcript_id "MSTRG.30775.1"; exon_number "1"; scaffold_1696 StringTie exon 114013 114060 1000 + . gene_id "MSTRG.30775"; transcript_id "MSTRG.30775.1"; exon_number "2"; scaffold_1696 StringTie exon 114467 114595 1000 + . gene_id "MSTRG.30775"; transcript_id "MSTRG.30775.1"; exon_number "3"; scaffold_1696 StringTie exon 115315 115408 1000 + . gene_id "MSTRG.30775"; transcript_id "MSTRG.30775.1"; exon_number "4"; scaffold_1696 StringTie exon 133595 133822 1000 . . gene_id "MSTRG.30779"; transcript_id "MSTRG.30779.1"; exon_number "1"; scaffold_1696 StringTie exon 177463 177671 1000 . . gene_id "MSTRG.30783"; transcript_id "MSTRG.30783.1"; exon_number "1"; scaffold_16961 StringTie exon 2164 2439 1000 - . gene_id "MSTRG.30786"; transcript_id "MSTRG.30786.1"; exon_number "1"; scaffold_16961 StringTie exon 3159 3425 1000 - . gene_id "MSTRG.30786"; transcript_id "MSTRG.30786.1"; exon_number "2"; scaffold_1697 StringTie exon 9945 10030 1000 - . gene_id "MSTRG.30792"; transcript_id "MSTRG.30792.1"; exon_number "1"; scaffold_1697 StringTie exon 10153 10236 1000 - . gene_id "MSTRG.30792"; transcript_id "MSTRG.30792.1"; exon_number "2"; scaffold_1697 StringTie exon 10360 10455 1000 - . gene_id "MSTRG.30792"; transcript_id "MSTRG.30792.1"; exon_number "3"; scaffold_16974 StringTie exon 7097 7197 1000 + . gene_id "MSTRG.30806"; transcript_id "MSTRG.30806.1"; exon_number "1"; scaffold_16974 StringTie exon 7865 8000 1000 + . gene_id "MSTRG.30806"; transcript_id "MSTRG.30806.1"; exon_number "2"; scaffold_16974 StringTie exon 8344 8449 1000 + . gene_id "MSTRG.30806"; transcript_id "MSTRG.30806.1"; exon_number "3"; scaffold_16974 StringTie exon 8805 8834 1000 + . gene_id "MSTRG.30806"; transcript_id "MSTRG.30806.1"; exon_number "4"; scaffold_16987 StringTie exon 3330 3628 1000 . . gene_id "MSTRG.30831"; transcript_id "MSTRG.30831.1"; exon_number "1"; scaffold_1699 StringTie exon 111996 112431 1000 . . gene_id "MSTRG.30834"; transcript_id "MSTRG.30834.1"; exon_number "1"; scaffold_16995 StringTie exon 5618 5728 1000 - . gene_id "MSTRG.30841"; transcript_id "MSTRG.30841.1"; exon_number "1"; scaffold_16995 StringTie exon 7763 7898 1000 - . gene_id "MSTRG.30841"; transcript_id "MSTRG.30841.1"; exon_number "2"; scaffold_17 StringTie exon 345120 345855 1000 - . gene_id "MSTRG.30868"; transcript_id "MSTRG.30868.2"; exon_number "1"; scaffold_17 StringTie exon 346254 346423 1000 - . gene_id "MSTRG.30868"; transcript_id "MSTRG.30868.2"; exon_number "2"; scaffold_17 StringTie exon 346634 346853 1000 - . gene_id "MSTRG.30868"; transcript_id "MSTRG.30868.2"; exon_number "3"; scaffold_17 StringTie exon 634385 635800 1000 . . gene_id "MSTRG.30880"; transcript_id "MSTRG.30880.1"; exon_number "1"; scaffold_17 StringTie exon 740171 740222 1000 - . gene_id "MSTRG.30888"; transcript_id "MSTRG.30888.1"; exon_number "1"; scaffold_17 StringTie exon 740466 740581 1000 - . gene_id "MSTRG.30888"; transcript_id "MSTRG.30888.1"; exon_number "2"; scaffold_17 StringTie exon 741661 741726 1000 - . gene_id "MSTRG.30888"; transcript_id "MSTRG.30888.1"; exon_number "3"; scaffold_17 StringTie exon 823530 823619 1000 - . gene_id "MSTRG.30898"; transcript_id "MSTRG.30898.1"; exon_number "1"; scaffold_17 StringTie exon 823889 824083 1000 - . gene_id "MSTRG.30898"; transcript_id "MSTRG.30898.1"; exon_number "2"; scaffold_17 StringTie exon 825076 825185 1000 - . gene_id "MSTRG.30898"; transcript_id "MSTRG.30898.1"; exon_number "3"; scaffold_17 StringTie exon 1361376 1361751 1000 . . gene_id "MSTRG.30926"; transcript_id "MSTRG.30926.1"; exon_number "1"; scaffold_17 StringTie exon 1432463 1432755 1000 . . gene_id "MSTRG.30931"; transcript_id "MSTRG.30931.1"; exon_number "1"; scaffold_17 StringTie exon 1702663 1702946 1000 . . gene_id "MSTRG.30949"; transcript_id "MSTRG.30949.1"; exon_number "1"; scaffold_17 StringTie exon 1869172 1869400 1000 . . gene_id "MSTRG.30961"; transcript_id "MSTRG.30961.1"; exon_number "1"; scaffold_17 StringTie exon 2129535 2129745 1000 + . gene_id "MSTRG.30989"; transcript_id "MSTRG.30989.2"; exon_number "1"; scaffold_17 StringTie exon 2136819 2136866 1000 + . gene_id "MSTRG.30989"; transcript_id "MSTRG.30989.2"; exon_number "2"; scaffold_17 StringTie exon 2194347 2194551 1000 . . gene_id "MSTRG.30991"; transcript_id "MSTRG.30991.1"; exon_number "1"; scaffold_17 StringTie exon 2199177 2199434 1000 . . gene_id "MSTRG.30992"; transcript_id "MSTRG.30992.1"; exon_number "1"; scaffold_17 StringTie exon 2210738 2211141 1000 . . gene_id "MSTRG.30993"; transcript_id "MSTRG.30993.1"; exon_number "1"; scaffold_17 StringTie exon 2253094 2253396 1000 . . gene_id "MSTRG.30996"; transcript_id "MSTRG.30996.1"; exon_number "1"; scaffold_170 StringTie exon 111198 111523 1000 . . gene_id "MSTRG.31050"; transcript_id "MSTRG.31050.1"; exon_number "1"; scaffold_170 StringTie exon 381191 381606 1000 . . gene_id "MSTRG.31064"; transcript_id "MSTRG.31064.1"; exon_number "1"; scaffold_170 StringTie exon 470215 470771 1000 . . gene_id "MSTRG.31069"; transcript_id "MSTRG.31069.1"; exon_number "1"; scaffold_170 StringTie exon 476186 476523 1000 . . gene_id "MSTRG.31071"; transcript_id "MSTRG.31071.1"; exon_number "1"; scaffold_170 StringTie exon 571075 571628 1000 . . gene_id "MSTRG.31073"; transcript_id "MSTRG.31073.1"; exon_number "1"; scaffold_170 StringTie exon 951767 951968 1000 + . gene_id "MSTRG.31093"; transcript_id "MSTRG.31093.1"; exon_number "1"; scaffold_170 StringTie exon 1171982 1172256 1000 . . gene_id "MSTRG.31103"; transcript_id "MSTRG.31103.1"; exon_number "1"; scaffold_170 StringTie exon 1182977 1183274 1000 . . gene_id "MSTRG.31105"; transcript_id "MSTRG.31105.1"; exon_number "1"; scaffold_17000 StringTie exon 7520 7641 1000 - . gene_id "MSTRG.31120"; transcript_id "MSTRG.31120.1"; exon_number "1"; scaffold_17000 StringTie exon 8043 8252 1000 - . gene_id "MSTRG.31120"; transcript_id "MSTRG.31120.1"; exon_number "2"; scaffold_17001 StringTie exon 5809 7357 1000 . . gene_id "MSTRG.31122"; transcript_id "MSTRG.31122.1"; exon_number "1"; scaffold_17002 StringTie exon 69 310 1000 . . gene_id "MSTRG.31124"; transcript_id "MSTRG.31124.1"; exon_number "1"; scaffold_17007 StringTie exon 3444 3784 1000 . . gene_id "MSTRG.31130"; transcript_id "MSTRG.31130.1"; exon_number "1"; scaffold_1701 StringTie exon 138585 139753 1000 . . gene_id "MSTRG.31145"; transcript_id "MSTRG.31145.1"; exon_number "1"; scaffold_17018 StringTie exon 8124 8433 1000 . . gene_id "MSTRG.31158"; transcript_id "MSTRG.31158.1"; exon_number "1"; scaffold_1702 StringTie exon 29379 29627 1000 . . gene_id "MSTRG.31162"; transcript_id "MSTRG.31162.1"; exon_number "1"; scaffold_1703 StringTie exon 22076 22183 1000 + . gene_id "MSTRG.31175"; transcript_id "MSTRG.31175.1"; exon_number "1"; scaffold_1703 StringTie exon 24800 24982 1000 + . gene_id "MSTRG.31175"; transcript_id "MSTRG.31175.1"; exon_number "2"; scaffold_1703 StringTie exon 33751 33817 1000 + . gene_id "MSTRG.31175"; transcript_id "MSTRG.31175.1"; exon_number "3"; scaffold_17030 StringTie exon 1625 1857 1000 . . gene_id "MSTRG.31185"; transcript_id "MSTRG.31185.1"; exon_number "1"; scaffold_1704 StringTie exon 9394 9894 1000 . . gene_id "MSTRG.31193"; transcript_id "MSTRG.31193.1"; exon_number "1"; scaffold_1704 StringTie exon 91787 92024 1000 - . gene_id "MSTRG.31198"; transcript_id "MSTRG.31198.1"; exon_number "1"; scaffold_1704 StringTie exon 95232 95291 1000 - . gene_id "MSTRG.31198"; transcript_id "MSTRG.31198.1"; exon_number "2"; scaffold_1706 StringTie exon 68680 69028 1000 . . gene_id "MSTRG.31242"; transcript_id "MSTRG.31242.1"; exon_number "1"; scaffold_17062 StringTie exon 2686 3000 1000 . . gene_id "MSTRG.31254"; transcript_id "MSTRG.31254.1"; exon_number "1"; scaffold_17065 StringTie exon 6425 6660 1000 . . gene_id "MSTRG.31257"; transcript_id "MSTRG.31257.1"; exon_number "1"; scaffold_1707 StringTie exon 41893 42168 1000 . . gene_id "MSTRG.31263"; transcript_id "MSTRG.31263.1"; exon_number "1"; scaffold_1707 StringTie exon 134495 134965 1000 . . gene_id "MSTRG.31271"; transcript_id "MSTRG.31271.1"; exon_number "1"; scaffold_1707 StringTie exon 172367 172573 1000 . . gene_id "MSTRG.31273"; transcript_id "MSTRG.31273.1"; exon_number "1"; scaffold_17070 StringTie exon 2333 2737 1000 . . gene_id "MSTRG.31274"; transcript_id "MSTRG.31274.1"; exon_number "1"; scaffold_1708 StringTie exon 14375 14663 1000 . . gene_id "MSTRG.31286"; transcript_id "MSTRG.31286.1"; exon_number "1"; scaffold_171 StringTie exon 421996 422217 1000 . . gene_id "MSTRG.31346"; transcript_id "MSTRG.31346.1"; exon_number "1"; scaffold_171 StringTie exon 937740 937959 1000 . . gene_id "MSTRG.31372"; transcript_id "MSTRG.31372.1"; exon_number "1"; scaffold_171 StringTie exon 1052442 1052468 1000 + . gene_id "MSTRG.31379"; transcript_id "MSTRG.31379.1"; exon_number "1"; scaffold_171 StringTie exon 1053624 1053794 1000 + . gene_id "MSTRG.31379"; transcript_id "MSTRG.31379.1"; exon_number "2"; scaffold_171 StringTie exon 1054148 1054252 1000 + . gene_id "MSTRG.31379"; transcript_id "MSTRG.31379.1"; exon_number "3"; scaffold_171 StringTie exon 1055298 1055343 1000 + . gene_id "MSTRG.31379"; transcript_id "MSTRG.31379.1"; exon_number "4"; scaffold_1710 StringTie exon 8328 8561 1000 - . gene_id "MSTRG.31418"; transcript_id "MSTRG.31418.1"; exon_number "1"; scaffold_1710 StringTie exon 78556 78643 1000 - . gene_id "MSTRG.31427"; transcript_id "MSTRG.31427.2"; exon_number "1"; scaffold_1710 StringTie exon 79455 79530 1000 - . gene_id "MSTRG.31427"; transcript_id "MSTRG.31427.2"; exon_number "2"; scaffold_1710 StringTie exon 81597 81708 1000 - . gene_id "MSTRG.31427"; transcript_id "MSTRG.31427.2"; exon_number "3"; scaffold_1710 StringTie exon 84312 84424 1000 - . gene_id "MSTRG.31427"; transcript_id "MSTRG.31427.2"; exon_number "4"; scaffold_1710 StringTie exon 119100 119398 1000 . . gene_id "MSTRG.31433"; transcript_id "MSTRG.31433.1"; exon_number "1"; scaffold_17101 StringTie exon 8229 8468 1000 . . gene_id "MSTRG.31443"; transcript_id "MSTRG.31443.1"; exon_number "1"; scaffold_17119 StringTie exon 327 604 1000 . . gene_id "MSTRG.31466"; transcript_id "MSTRG.31466.1"; exon_number "1"; scaffold_1712 StringTie exon 10270 10348 1000 + . gene_id "MSTRG.31470"; transcript_id "MSTRG.31470.1"; exon_number "1"; scaffold_1712 StringTie exon 10490 10617 1000 + . gene_id "MSTRG.31470"; transcript_id "MSTRG.31470.1"; exon_number "2"; scaffold_1712 StringTie exon 10745 10841 1000 + . gene_id "MSTRG.31470"; transcript_id "MSTRG.31470.1"; exon_number "3"; scaffold_1712 StringTie exon 10954 11056 1000 + . gene_id "MSTRG.31470"; transcript_id "MSTRG.31470.1"; exon_number "4"; scaffold_1712 StringTie exon 11158 11259 1000 + . gene_id "MSTRG.31470"; transcript_id "MSTRG.31470.1"; exon_number "5"; scaffold_1712 StringTie exon 11357 11487 1000 + . gene_id "MSTRG.31470"; transcript_id "MSTRG.31470.1"; exon_number "6"; scaffold_1712 StringTie exon 11682 11764 1000 + . gene_id "MSTRG.31470"; transcript_id "MSTRG.31470.1"; exon_number "7"; scaffold_1712 StringTie exon 90558 91272 1000 - . gene_id "MSTRG.31485"; transcript_id "MSTRG.31485.1"; exon_number "1"; scaffold_1712 StringTie exon 102581 102820 1000 - . gene_id "MSTRG.31485"; transcript_id "MSTRG.31485.1"; exon_number "2"; scaffold_1712 StringTie exon 103601 103682 1000 - . gene_id "MSTRG.31485"; transcript_id "MSTRG.31485.1"; exon_number "3"; scaffold_1712 StringTie exon 103956 104006 1000 - . gene_id "MSTRG.31485"; transcript_id "MSTRG.31485.1"; exon_number "4"; scaffold_1712 StringTie exon 104339 104486 1000 - . gene_id "MSTRG.31485"; transcript_id "MSTRG.31485.1"; exon_number "5"; scaffold_17125 StringTie exon 8454 9648 1000 . . gene_id "MSTRG.31500"; transcript_id "MSTRG.31500.1"; exon_number "1"; scaffold_1713 StringTie exon 151037 151276 1000 . . gene_id "MSTRG.31509"; transcript_id "MSTRG.31509.1"; exon_number "1"; scaffold_17138 StringTie exon 5387 6174 1000 . . gene_id "MSTRG.31518"; transcript_id "MSTRG.31518.1"; exon_number "1"; scaffold_1714 StringTie exon 59664 59784 1000 + . gene_id "MSTRG.31522"; transcript_id "MSTRG.31522.1"; exon_number "1"; scaffold_1714 StringTie exon 60183 60275 1000 + . gene_id "MSTRG.31522"; transcript_id "MSTRG.31522.1"; exon_number "2"; scaffold_1714 StringTie exon 85950 86173 1000 . . gene_id "MSTRG.31528"; transcript_id "MSTRG.31528.1"; exon_number "1"; scaffold_17146 StringTie exon 142 353 1000 . . gene_id "MSTRG.31534"; transcript_id "MSTRG.31534.1"; exon_number "1"; scaffold_17156 StringTie exon 451 547 1000 - . gene_id "MSTRG.31560"; transcript_id "MSTRG.31560.1"; exon_number "1"; scaffold_17156 StringTie exon 689 764 1000 - . gene_id "MSTRG.31560"; transcript_id "MSTRG.31560.1"; exon_number "2"; scaffold_17156 StringTie exon 1273 1463 1000 - . gene_id "MSTRG.31560"; transcript_id "MSTRG.31560.1"; exon_number "3"; scaffold_17156 StringTie exon 2023 2184 1000 - . gene_id "MSTRG.31560"; transcript_id "MSTRG.31560.1"; exon_number "4"; scaffold_1717 StringTie exon 101635 101862 1000 . . gene_id "MSTRG.31603"; transcript_id "MSTRG.31603.1"; exon_number "1"; scaffold_1717 StringTie exon 114185 114275 1000 - . gene_id "MSTRG.31606"; transcript_id "MSTRG.31606.1"; exon_number "1"; scaffold_1717 StringTie exon 121773 122096 1000 - . gene_id "MSTRG.31606"; transcript_id "MSTRG.31606.1"; exon_number "2"; scaffold_17173 StringTie exon 9272 9617 1000 . . gene_id "MSTRG.31622"; transcript_id "MSTRG.31622.1"; exon_number "1"; scaffold_1719 StringTie exon 92031 92153 1000 - . gene_id "MSTRG.31657"; transcript_id "MSTRG.31657.1"; exon_number "1"; scaffold_1719 StringTie exon 94715 94852 1000 - . gene_id "MSTRG.31657"; transcript_id "MSTRG.31657.1"; exon_number "2"; scaffold_172 StringTie exon 39914 40018 1000 + . gene_id "MSTRG.31693"; transcript_id "MSTRG.31693.1"; exon_number "1"; scaffold_172 StringTie exon 139392 139622 1000 + . gene_id "MSTRG.31693"; transcript_id "MSTRG.31693.1"; exon_number "2"; scaffold_172 StringTie exon 184361 184687 1000 . . gene_id "MSTRG.31704"; transcript_id "MSTRG.31704.1"; exon_number "1"; scaffold_172 StringTie exon 326524 326535 1000 - . gene_id "MSTRG.31723"; transcript_id "MSTRG.31723.1"; exon_number "1"; scaffold_172 StringTie exon 326705 326842 1000 - . gene_id "MSTRG.31723"; transcript_id "MSTRG.31723.1"; exon_number "2"; scaffold_172 StringTie exon 327477 327623 1000 - . gene_id "MSTRG.31723"; transcript_id "MSTRG.31723.1"; exon_number "3"; scaffold_172 StringTie exon 327881 328027 1000 - . gene_id "MSTRG.31723"; transcript_id "MSTRG.31723.1"; exon_number "4"; scaffold_172 StringTie exon 328904 329083 1000 - . gene_id "MSTRG.31723"; transcript_id "MSTRG.31723.1"; exon_number "5"; scaffold_172 StringTie exon 329226 329330 1000 - . gene_id "MSTRG.31724"; transcript_id "MSTRG.31724.1"; exon_number "1"; scaffold_172 StringTie exon 329461 329653 1000 - . gene_id "MSTRG.31724"; transcript_id "MSTRG.31724.1"; exon_number "2"; scaffold_172 StringTie exon 329879 330038 1000 - . gene_id "MSTRG.31724"; transcript_id "MSTRG.31724.1"; exon_number "3"; scaffold_172 StringTie exon 330253 330358 1000 - . gene_id "MSTRG.31724"; transcript_id "MSTRG.31724.1"; exon_number "4"; scaffold_172 StringTie exon 330528 330639 1000 - . gene_id "MSTRG.31724"; transcript_id "MSTRG.31724.1"; exon_number "5"; scaffold_172 StringTie exon 332613 332745 1000 - . gene_id "MSTRG.31724"; transcript_id "MSTRG.31724.1"; exon_number "6"; scaffold_172 StringTie exon 333763 333861 1000 - . gene_id "MSTRG.31724"; transcript_id "MSTRG.31724.1"; exon_number "7"; scaffold_172 StringTie exon 334374 334499 1000 - . gene_id "MSTRG.31724"; transcript_id "MSTRG.31724.1"; exon_number "8"; scaffold_172 StringTie exon 342893 343053 1000 + . gene_id "MSTRG.31728"; transcript_id "MSTRG.31728.1"; exon_number "1"; scaffold_172 StringTie exon 343361 343457 1000 + . gene_id "MSTRG.31728"; transcript_id "MSTRG.31728.1"; exon_number "2"; scaffold_172 StringTie exon 343555 343746 1000 + . gene_id "MSTRG.31728"; transcript_id "MSTRG.31728.1"; exon_number "3"; scaffold_172 StringTie exon 343878 343889 1000 + . gene_id "MSTRG.31728"; transcript_id "MSTRG.31728.1"; exon_number "4"; scaffold_172 StringTie exon 378665 378936 1000 - . gene_id "MSTRG.31737"; transcript_id "MSTRG.31737.1"; exon_number "1"; scaffold_172 StringTie exon 379559 379977 1000 - . gene_id "MSTRG.31737"; transcript_id "MSTRG.31737.1"; exon_number "2"; scaffold_172 StringTie exon 418611 418918 1000 . . gene_id "MSTRG.31744"; transcript_id "MSTRG.31744.1"; exon_number "1"; scaffold_172 StringTie exon 1324940 1325266 1000 . . gene_id "MSTRG.31798"; transcript_id "MSTRG.31798.1"; exon_number "1"; scaffold_172 StringTie exon 1362726 1362963 1000 . . gene_id "MSTRG.31805"; transcript_id "MSTRG.31805.1"; exon_number "1"; scaffold_172 StringTie exon 1364858 1365358 1000 . . gene_id "MSTRG.31806"; transcript_id "MSTRG.31806.1"; exon_number "1"; scaffold_172 StringTie exon 1373638 1373935 1000 . . gene_id "MSTRG.31807"; transcript_id "MSTRG.31807.1"; exon_number "1"; scaffold_1720 StringTie exon 176334 176489 1000 + . gene_id "MSTRG.31825"; transcript_id "MSTRG.31825.1"; exon_number "1"; scaffold_1720 StringTie exon 180549 180759 1000 + . gene_id "MSTRG.31825"; transcript_id "MSTRG.31825.1"; exon_number "2"; scaffold_17205 StringTie exon 5859 6379 1000 . . gene_id "MSTRG.31829"; transcript_id "MSTRG.31829.1"; exon_number "1"; scaffold_1721 StringTie exon 184704 184906 1000 . . gene_id "MSTRG.31846"; transcript_id "MSTRG.31846.1"; exon_number "1"; scaffold_17219 StringTie exon 3695 3985 1000 . . gene_id "MSTRG.31857"; transcript_id "MSTRG.31857.1"; exon_number "1"; scaffold_17220 StringTie exon 2764 2963 1000 . . gene_id "MSTRG.31878"; transcript_id "MSTRG.31878.1"; exon_number "1"; scaffold_1723 StringTie exon 90391 90616 1000 . . gene_id "MSTRG.31889"; transcript_id "MSTRG.31889.1"; exon_number "1"; scaffold_17237 StringTie exon 1708 1991 1000 . . gene_id "MSTRG.31902"; transcript_id "MSTRG.31902.1"; exon_number "1"; scaffold_1724 StringTie exon 155011 155320 1000 . . gene_id "MSTRG.31922"; transcript_id "MSTRG.31922.1"; exon_number "1"; scaffold_1725 StringTie exon 59486 59719 1000 + . gene_id "MSTRG.31940"; transcript_id "MSTRG.31940.2"; exon_number "1"; scaffold_1725 StringTie exon 59810 59896 1000 + . gene_id "MSTRG.31940"; transcript_id "MSTRG.31940.2"; exon_number "2"; scaffold_1725 StringTie exon 60178 60208 1000 + . gene_id "MSTRG.31940"; transcript_id "MSTRG.31940.2"; exon_number "3"; scaffold_1725 StringTie exon 69794 69849 1000 + . gene_id "MSTRG.31940"; transcript_id "MSTRG.31940.2"; exon_number "4"; scaffold_1725 StringTie exon 69962 70093 1000 + . gene_id "MSTRG.31940"; transcript_id "MSTRG.31940.2"; exon_number "5"; scaffold_1726 StringTie exon 23178 23318 1000 - . gene_id "MSTRG.31956"; transcript_id "MSTRG.31956.1"; exon_number "1"; scaffold_1726 StringTie exon 23531 23795 1000 - . gene_id "MSTRG.31956"; transcript_id "MSTRG.31956.1"; exon_number "2"; scaffold_1726 StringTie exon 26256 26318 1000 - . gene_id "MSTRG.31958"; transcript_id "MSTRG.31958.1"; exon_number "1"; scaffold_1726 StringTie exon 26611 26783 1000 - . gene_id "MSTRG.31958"; transcript_id "MSTRG.31958.1"; exon_number "2"; scaffold_1726 StringTie exon 26894 26978 1000 - . gene_id "MSTRG.31958"; transcript_id "MSTRG.31958.1"; exon_number "3"; scaffold_1726 StringTie exon 72816 73031 1000 . . gene_id "MSTRG.31963"; transcript_id "MSTRG.31963.1"; exon_number "1"; scaffold_1726 StringTie exon 181395 181676 1000 . . gene_id "MSTRG.31970"; transcript_id "MSTRG.31970.1"; exon_number "1"; scaffold_17265 StringTie exon 8563 9231 1000 . . gene_id "MSTRG.31975"; transcript_id "MSTRG.31975.1"; exon_number "1"; scaffold_1727 StringTie exon 39164 39430 1000 . . gene_id "MSTRG.31979"; transcript_id "MSTRG.31979.1"; exon_number "1"; scaffold_17274 StringTie exon 416 543 1000 - . gene_id "MSTRG.32000"; transcript_id "MSTRG.32000.1"; exon_number "1"; scaffold_17274 StringTie exon 909 1039 1000 - . gene_id "MSTRG.32000"; transcript_id "MSTRG.32000.1"; exon_number "2"; scaffold_17274 StringTie exon 1831 1912 1000 - . gene_id "MSTRG.32000"; transcript_id "MSTRG.32000.1"; exon_number "3"; scaffold_17274 StringTie exon 2086 2213 1000 - . gene_id "MSTRG.32000"; transcript_id "MSTRG.32000.1"; exon_number "4"; scaffold_1728 StringTie exon 81870 82148 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "1"; scaffold_1728 StringTie exon 83619 83781 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "2"; scaffold_1728 StringTie exon 83998 84203 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "3"; scaffold_1728 StringTie exon 84382 84520 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "4"; scaffold_1728 StringTie exon 84744 84949 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "5"; scaffold_1728 StringTie exon 85072 85230 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "6"; scaffold_1728 StringTie exon 91113 91264 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "7"; scaffold_1728 StringTie exon 91404 91560 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "8"; scaffold_1728 StringTie exon 91772 92005 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "9"; scaffold_1728 StringTie exon 92213 92958 1000 + . gene_id "MSTRG.32005"; transcript_id "MSTRG.32005.1"; exon_number "10"; scaffold_1728 StringTie exon 97772 97917 1000 + . gene_id "MSTRG.32006"; transcript_id "MSTRG.32006.1"; exon_number "1"; scaffold_1728 StringTie exon 100827 100950 1000 + . gene_id "MSTRG.32006"; transcript_id "MSTRG.32006.1"; exon_number "2"; scaffold_1728 StringTie exon 101027 101111 1000 + . gene_id "MSTRG.32006"; transcript_id "MSTRG.32006.1"; exon_number "3"; scaffold_1728 StringTie exon 182183 182579 1000 . . gene_id "MSTRG.32018"; transcript_id "MSTRG.32018.1"; exon_number "1"; scaffold_17284 StringTie exon 6459 6699 1000 . . gene_id "MSTRG.32022"; transcript_id "MSTRG.32022.1"; exon_number "1"; scaffold_17286 StringTie exon 8820 9369 1000 . . gene_id "MSTRG.32024"; transcript_id "MSTRG.32024.1"; exon_number "1"; scaffold_1729 StringTie exon 8196 8307 1000 - . gene_id "MSTRG.32030"; transcript_id "MSTRG.32030.1"; exon_number "1"; scaffold_1729 StringTie exon 8396 8484 1000 - . gene_id "MSTRG.32030"; transcript_id "MSTRG.32030.1"; exon_number "2"; scaffold_1729 StringTie exon 73099 73153 1000 + . gene_id "MSTRG.32037"; transcript_id "MSTRG.32037.1"; exon_number "1"; scaffold_1729 StringTie exon 73270 73422 1000 + . gene_id "MSTRG.32037"; transcript_id "MSTRG.32037.1"; exon_number "2"; scaffold_1729 StringTie exon 73491 73600 1000 + . gene_id "MSTRG.32037"; transcript_id "MSTRG.32037.1"; exon_number "3"; scaffold_1729 StringTie exon 73682 73782 1000 + . gene_id "MSTRG.32037"; transcript_id "MSTRG.32037.1"; exon_number "4"; scaffold_1729 StringTie exon 74007 74080 1000 + . gene_id "MSTRG.32037"; transcript_id "MSTRG.32037.1"; exon_number "5"; scaffold_1729 StringTie exon 75592 76494 1000 + . gene_id "MSTRG.32037"; transcript_id "MSTRG.32037.1"; exon_number "6"; scaffold_1729 StringTie exon 142423 142741 1000 . . gene_id "MSTRG.32039"; transcript_id "MSTRG.32039.1"; exon_number "1"; scaffold_173 StringTie exon 103872 104117 1000 . . gene_id "MSTRG.32057"; transcript_id "MSTRG.32057.1"; exon_number "1"; scaffold_173 StringTie exon 276425 277779 1000 . . gene_id "MSTRG.32069"; transcript_id "MSTRG.32069.1"; exon_number "1"; scaffold_173 StringTie exon 431236 431385 1000 - . gene_id "MSTRG.32086"; transcript_id "MSTRG.32086.1"; exon_number "1"; scaffold_173 StringTie exon 435164 435627 1000 - . gene_id "MSTRG.32086"; transcript_id "MSTRG.32086.1"; exon_number "2"; scaffold_173 StringTie exon 942091 942312 1000 . . gene_id "MSTRG.32117"; transcript_id "MSTRG.32117.1"; exon_number "1"; scaffold_1730 StringTie exon 63370 64445 1000 . . gene_id "MSTRG.32145"; transcript_id "MSTRG.32145.1"; exon_number "1"; scaffold_1731 StringTie exon 64961 64986 1000 - . gene_id "MSTRG.32171"; transcript_id "MSTRG.32171.1"; exon_number "1"; scaffold_1731 StringTie exon 65166 65214 1000 - . gene_id "MSTRG.32171"; transcript_id "MSTRG.32171.1"; exon_number "2"; scaffold_1731 StringTie exon 88172 88326 1000 - . gene_id "MSTRG.32171"; transcript_id "MSTRG.32171.1"; exon_number "3"; scaffold_1733 StringTie exon 12372 13666 1000 . . gene_id "MSTRG.32202"; transcript_id "MSTRG.32202.1"; exon_number "1"; scaffold_1733 StringTie exon 27347 27667 1000 . . gene_id "MSTRG.32204"; transcript_id "MSTRG.32204.1"; exon_number "1"; scaffold_1733 StringTie exon 90146 90293 1000 + . gene_id "MSTRG.32215"; transcript_id "MSTRG.32215.1"; exon_number "1"; scaffold_1733 StringTie exon 105963 106089 1000 + . gene_id "MSTRG.32215"; transcript_id "MSTRG.32215.1"; exon_number "2"; scaffold_1733 StringTie exon 172450 172654 1000 . . gene_id "MSTRG.32218"; transcript_id "MSTRG.32218.1"; exon_number "1"; scaffold_1734 StringTie exon 38585 38940 1000 . . gene_id "MSTRG.32226"; transcript_id "MSTRG.32226.1"; exon_number "1"; scaffold_1734 StringTie exon 48247 48779 1000 . . gene_id "MSTRG.32228"; transcript_id "MSTRG.32228.1"; exon_number "1"; scaffold_17340 StringTie exon 733 998 1000 . . gene_id "MSTRG.32245"; transcript_id "MSTRG.32245.1"; exon_number "1"; scaffold_1735 StringTie exon 78269 78512 1000 . . gene_id "MSTRG.32255"; transcript_id "MSTRG.32255.1"; exon_number "1"; scaffold_1735 StringTie exon 114282 114495 1000 . . gene_id "MSTRG.32258"; transcript_id "MSTRG.32258.1"; exon_number "1"; scaffold_1735 StringTie exon 119814 120005 1000 - . gene_id "MSTRG.32260"; transcript_id "MSTRG.32260.1"; exon_number "1"; scaffold_1735 StringTie exon 120130 120198 1000 - . gene_id "MSTRG.32260"; transcript_id "MSTRG.32260.1"; exon_number "2"; scaffold_1735 StringTie exon 120679 120900 1000 - . gene_id "MSTRG.32260"; transcript_id "MSTRG.32260.1"; exon_number "3"; scaffold_1735 StringTie exon 149057 149320 1000 . . gene_id "MSTRG.32263"; transcript_id "MSTRG.32263.1"; exon_number "1"; scaffold_1736 StringTie exon 21225 21435 1000 . . gene_id "MSTRG.32276"; transcript_id "MSTRG.32276.1"; exon_number "1"; scaffold_1736 StringTie exon 102089 102358 1000 . . gene_id "MSTRG.32287"; transcript_id "MSTRG.32287.1"; exon_number "1"; scaffold_1736 StringTie exon 129788 129894 1000 - . gene_id "MSTRG.32295"; transcript_id "MSTRG.32295.1"; exon_number "1"; scaffold_1736 StringTie exon 130467 130547 1000 - . gene_id "MSTRG.32295"; transcript_id "MSTRG.32295.1"; exon_number "2"; scaffold_1736 StringTie exon 130690 130758 1000 - . gene_id "MSTRG.32295"; transcript_id "MSTRG.32295.1"; exon_number "3"; scaffold_1736 StringTie exon 130922 130998 1000 - . gene_id "MSTRG.32295"; transcript_id "MSTRG.32295.1"; exon_number "4"; scaffold_1736 StringTie exon 132436 132572 1000 - . gene_id "MSTRG.32295"; transcript_id "MSTRG.32295.1"; exon_number "5"; scaffold_1737 StringTie exon 125615 125726 1000 + . gene_id "MSTRG.32311"; transcript_id "MSTRG.32311.1"; exon_number "1"; scaffold_1737 StringTie exon 126439 126557 1000 + . gene_id "MSTRG.32311"; transcript_id "MSTRG.32311.1"; exon_number "2"; scaffold_17382 StringTie exon 2679 2962 1000 . . gene_id "MSTRG.32336"; transcript_id "MSTRG.32336.1"; exon_number "1"; scaffold_17391 StringTie exon 7171 7573 1000 . . gene_id "MSTRG.32348"; transcript_id "MSTRG.32348.1"; exon_number "1"; scaffold_17393 StringTie exon 104 755 1000 . . gene_id "MSTRG.32350"; transcript_id "MSTRG.32350.1"; exon_number "1"; scaffold_17397 StringTie exon 6014 6271 1000 + . gene_id "MSTRG.32352"; transcript_id "MSTRG.32352.1"; exon_number "1"; scaffold_17397 StringTie exon 6449 6494 1000 + . gene_id "MSTRG.32352"; transcript_id "MSTRG.32352.1"; exon_number "2"; scaffold_17397 StringTie exon 6652 6746 1000 + . gene_id "MSTRG.32352"; transcript_id "MSTRG.32352.1"; exon_number "3"; scaffold_17397 StringTie exon 7033 7103 1000 + . gene_id "MSTRG.32352"; transcript_id "MSTRG.32352.1"; exon_number "4"; scaffold_17397 StringTie exon 7328 7419 1000 + . gene_id "MSTRG.32352"; transcript_id "MSTRG.32352.1"; exon_number "5"; scaffold_174 StringTie exon 33368 33618 1000 . . gene_id "MSTRG.32355"; transcript_id "MSTRG.32355.1"; exon_number "1"; scaffold_174 StringTie exon 208323 208370 1000 - . gene_id "MSTRG.32369"; transcript_id "MSTRG.32369.1"; exon_number "1"; scaffold_174 StringTie exon 209017 209159 1000 - . gene_id "MSTRG.32369"; transcript_id "MSTRG.32369.1"; exon_number "2"; scaffold_174 StringTie exon 210737 211067 1000 - . gene_id "MSTRG.32369"; transcript_id "MSTRG.32369.1"; exon_number "3"; scaffold_174 StringTie exon 225713 225930 1000 . . gene_id "MSTRG.32371"; transcript_id "MSTRG.32371.1"; exon_number "1"; scaffold_174 StringTie exon 364708 364958 1000 - . gene_id "MSTRG.32404"; transcript_id "MSTRG.32404.1"; exon_number "1"; scaffold_174 StringTie exon 365301 365444 1000 - . gene_id "MSTRG.32404"; transcript_id "MSTRG.32404.1"; exon_number "2"; scaffold_174 StringTie exon 371818 372548 1000 . . gene_id "MSTRG.32407"; transcript_id "MSTRG.32407.1"; exon_number "1"; scaffold_174 StringTie exon 621814 622653 1000 . . gene_id "MSTRG.32424"; transcript_id "MSTRG.32424.1"; exon_number "1"; scaffold_174 StringTie exon 645376 645900 1000 . . gene_id "MSTRG.32426"; transcript_id "MSTRG.32426.1"; exon_number "1"; scaffold_174 StringTie exon 678837 679020 1000 - . gene_id "MSTRG.32431"; transcript_id "MSTRG.32431.1"; exon_number "1"; scaffold_174 StringTie exon 679121 679162 1000 - . gene_id "MSTRG.32431"; transcript_id "MSTRG.32431.1"; exon_number "2"; scaffold_174 StringTie exon 928725 928812 1000 + . gene_id "MSTRG.32441"; transcript_id "MSTRG.32441.1"; exon_number "1"; scaffold_174 StringTie exon 928965 929070 1000 + . gene_id "MSTRG.32441"; transcript_id "MSTRG.32441.1"; exon_number "2"; scaffold_174 StringTie exon 931189 931275 1000 + . gene_id "MSTRG.32441"; transcript_id "MSTRG.32441.1"; exon_number "3"; scaffold_174 StringTie exon 1234013 1234215 1000 . . gene_id "MSTRG.32462"; transcript_id "MSTRG.32462.1"; exon_number "1"; scaffold_17403 StringTie exon 7015 7783 1000 . . gene_id "MSTRG.32482"; transcript_id "MSTRG.32482.1"; exon_number "1"; scaffold_17421 StringTie exon 3220 3535 1000 . . gene_id "MSTRG.32515"; transcript_id "MSTRG.32515.1"; exon_number "1"; scaffold_17427 StringTie exon 1986 2044 1000 - . gene_id "MSTRG.32518"; transcript_id "MSTRG.32518.1"; exon_number "1"; scaffold_17427 StringTie exon 3309 3396 1000 - . gene_id "MSTRG.32518"; transcript_id "MSTRG.32518.1"; exon_number "2"; scaffold_17427 StringTie exon 4018 4087 1000 - . gene_id "MSTRG.32518"; transcript_id "MSTRG.32518.1"; exon_number "3"; scaffold_17427 StringTie exon 4410 4465 1000 - . gene_id "MSTRG.32518"; transcript_id "MSTRG.32518.1"; exon_number "4"; scaffold_17427 StringTie exon 4647 4749 1000 - . gene_id "MSTRG.32518"; transcript_id "MSTRG.32518.1"; exon_number "5"; scaffold_17428 StringTie exon 3384 4050 1000 . . gene_id "MSTRG.32521"; transcript_id "MSTRG.32521.1"; exon_number "1"; scaffold_17455 StringTie exon 7036 7344 1000 . . gene_id "MSTRG.32583"; transcript_id "MSTRG.32583.1"; exon_number "1"; scaffold_17458 StringTie exon 220 456 1000 + . gene_id "MSTRG.32585"; transcript_id "MSTRG.32585.2"; exon_number "1"; scaffold_17458 StringTie exon 700 894 1000 + . gene_id "MSTRG.32585"; transcript_id "MSTRG.32585.2"; exon_number "2"; scaffold_17458 StringTie exon 3016 3027 1000 + . gene_id "MSTRG.32585"; transcript_id "MSTRG.32585.2"; exon_number "3"; scaffold_1746 StringTie exon 79245 79587 1000 . . gene_id "MSTRG.32595"; transcript_id "MSTRG.32595.1"; exon_number "1"; scaffold_1746 StringTie exon 101001 101253 1000 . . gene_id "MSTRG.32596"; transcript_id "MSTRG.32596.1"; exon_number "1"; scaffold_17463 StringTie exon 7148 7414 1000 . . gene_id "MSTRG.32604"; transcript_id "MSTRG.32604.1"; exon_number "1"; scaffold_17477 StringTie exon 699 920 1000 . . gene_id "MSTRG.32628"; transcript_id "MSTRG.32628.1"; exon_number "1"; scaffold_1749 StringTie exon 125458 125743 1000 . . gene_id "MSTRG.32647"; transcript_id "MSTRG.32647.1"; exon_number "1"; scaffold_175 StringTie exon 230523 230761 1000 . . gene_id "MSTRG.32673"; transcript_id "MSTRG.32673.1"; exon_number "1"; scaffold_175 StringTie exon 422352 422432 1000 + . gene_id "MSTRG.32682"; transcript_id "MSTRG.32682.1"; exon_number "1"; scaffold_175 StringTie exon 424601 424814 1000 + . gene_id "MSTRG.32682"; transcript_id "MSTRG.32682.1"; exon_number "2"; scaffold_175 StringTie exon 426876 426961 1000 + . gene_id "MSTRG.32682"; transcript_id "MSTRG.32682.1"; exon_number "3"; scaffold_175 StringTie exon 427548 427702 1000 + . gene_id "MSTRG.32682"; transcript_id "MSTRG.32682.1"; exon_number "4"; scaffold_175 StringTie exon 427922 427992 1000 + . gene_id "MSTRG.32682"; transcript_id "MSTRG.32682.1"; exon_number "5"; scaffold_175 StringTie exon 452777 452920 1000 + . gene_id "MSTRG.32686"; transcript_id "MSTRG.32686.1"; exon_number "1"; scaffold_175 StringTie exon 453019 453085 1000 + . gene_id "MSTRG.32686"; transcript_id "MSTRG.32686.1"; exon_number "2"; scaffold_175 StringTie exon 455037 455609 1000 . . gene_id "MSTRG.32688"; transcript_id "MSTRG.32688.1"; exon_number "1"; scaffold_175 StringTie exon 558599 558917 1000 . . gene_id "MSTRG.32707"; transcript_id "MSTRG.32707.1"; exon_number "1"; scaffold_1750 StringTie exon 127935 128168 1000 . . gene_id "MSTRG.32765"; transcript_id "MSTRG.32765.1"; exon_number "1"; scaffold_17500 StringTie exon 1033 1058 1000 - . gene_id "MSTRG.32769"; transcript_id "MSTRG.32769.1"; exon_number "1"; scaffold_17500 StringTie exon 1088 1399 1000 - . gene_id "MSTRG.32769"; transcript_id "MSTRG.32769.1"; exon_number "2"; scaffold_17500 StringTie exon 7851 8623 1000 + . gene_id "MSTRG.32771"; transcript_id "MSTRG.32771.1"; exon_number "1"; scaffold_17504 StringTie exon 7440 7987 1000 . . gene_id "MSTRG.32777"; transcript_id "MSTRG.32777.1"; exon_number "1"; scaffold_1752 StringTie exon 149137 149360 1000 . . gene_id "MSTRG.32810"; transcript_id "MSTRG.32810.1"; exon_number "1"; scaffold_17529 StringTie exon 529 755 1000 . . gene_id "MSTRG.32819"; transcript_id "MSTRG.32819.1"; exon_number "1"; scaffold_1755 StringTie exon 40108 40356 1000 . . gene_id "MSTRG.32866"; transcript_id "MSTRG.32866.1"; exon_number "1"; scaffold_1755 StringTie exon 71489 71653 1000 - . gene_id "MSTRG.32867"; transcript_id "MSTRG.32867.1"; exon_number "1"; scaffold_1755 StringTie exon 158420 158510 1000 - . gene_id "MSTRG.32867"; transcript_id "MSTRG.32867.1"; exon_number "2"; scaffold_1755 StringTie exon 93474 93728 1000 . . gene_id "MSTRG.32869"; transcript_id "MSTRG.32869.1"; exon_number "1"; scaffold_17553 StringTie exon 8969 9315 1000 . . gene_id "MSTRG.32873"; transcript_id "MSTRG.32873.1"; exon_number "1"; scaffold_1756 StringTie exon 146388 146628 1000 . . gene_id "MSTRG.32889"; transcript_id "MSTRG.32889.1"; exon_number "1"; scaffold_1757 StringTie exon 70758 70992 1000 . . gene_id "MSTRG.32906"; transcript_id "MSTRG.32906.1"; exon_number "1"; scaffold_1758 StringTie exon 70977 71402 1000 . . gene_id "MSTRG.32927"; transcript_id "MSTRG.32927.1"; exon_number "1"; scaffold_1759 StringTie exon 44667 45090 1000 . . gene_id "MSTRG.32938"; transcript_id "MSTRG.32938.1"; exon_number "1"; scaffold_1759 StringTie exon 99062 99290 1000 . . gene_id "MSTRG.32942"; transcript_id "MSTRG.32942.1"; exon_number "1"; scaffold_17590 StringTie exon 5922 6169 1000 . . gene_id "MSTRG.32947"; transcript_id "MSTRG.32947.1"; exon_number "1"; scaffold_176 StringTie exon 6029 6767 1000 . . gene_id "MSTRG.32950"; transcript_id "MSTRG.32950.1"; exon_number "1"; scaffold_176 StringTie exon 12702 12756 1000 + . gene_id "MSTRG.32951"; transcript_id "MSTRG.32951.1"; exon_number "1"; scaffold_176 StringTie exon 12948 13004 1000 + . gene_id "MSTRG.32951"; transcript_id "MSTRG.32951.1"; exon_number "2"; scaffold_176 StringTie exon 13293 13373 1000 + . gene_id "MSTRG.32951"; transcript_id "MSTRG.32951.1"; exon_number "3"; scaffold_176 StringTie exon 13570 13582 1000 + . gene_id "MSTRG.32951"; transcript_id "MSTRG.32951.1"; exon_number "4"; scaffold_176 StringTie exon 118846 119173 1000 + . gene_id "MSTRG.32967"; transcript_id "MSTRG.32967.1"; exon_number "1"; scaffold_176 StringTie exon 134813 135032 1000 . . gene_id "MSTRG.32969"; transcript_id "MSTRG.32969.1"; exon_number "1"; scaffold_176 StringTie exon 202700 203015 1000 + . gene_id "MSTRG.32974"; transcript_id "MSTRG.32974.1"; exon_number "1"; scaffold_176 StringTie exon 203132 203180 1000 + . gene_id "MSTRG.32974"; transcript_id "MSTRG.32974.1"; exon_number "2"; scaffold_176 StringTie exon 233072 233296 1000 . . gene_id "MSTRG.32980"; transcript_id "MSTRG.32980.1"; exon_number "1"; scaffold_176 StringTie exon 322218 322462 1000 . . gene_id "MSTRG.32988"; transcript_id "MSTRG.32988.1"; exon_number "1"; scaffold_176 StringTie exon 393828 394105 1000 . . gene_id "MSTRG.32990"; transcript_id "MSTRG.32990.1"; exon_number "1"; scaffold_176 StringTie exon 828245 828386 1000 + . gene_id "MSTRG.33017"; transcript_id "MSTRG.33017.1"; exon_number "1"; scaffold_176 StringTie exon 830418 830472 1000 + . gene_id "MSTRG.33017"; transcript_id "MSTRG.33017.1"; exon_number "2"; scaffold_176 StringTie exon 830637 830710 1000 + . gene_id "MSTRG.33017"; transcript_id "MSTRG.33017.1"; exon_number "3"; scaffold_176 StringTie exon 830840 830914 1000 + . gene_id "MSTRG.33017"; transcript_id "MSTRG.33017.1"; exon_number "4"; scaffold_176 StringTie exon 831084 831135 1000 + . gene_id "MSTRG.33017"; transcript_id "MSTRG.33017.1"; exon_number "5"; scaffold_176 StringTie exon 831276 831705 1000 + . gene_id "MSTRG.33017"; transcript_id "MSTRG.33017.1"; exon_number "6"; scaffold_176 StringTie exon 914678 916115 1000 . . gene_id "MSTRG.33029"; transcript_id "MSTRG.33029.1"; exon_number "1"; scaffold_176 StringTie exon 977740 977962 1000 . . gene_id "MSTRG.33035"; transcript_id "MSTRG.33035.1"; exon_number "1"; scaffold_176 StringTie exon 1051286 1051508 1000 . . gene_id "MSTRG.33042"; transcript_id "MSTRG.33042.1"; exon_number "1"; scaffold_1760 StringTie exon 70630 70968 1000 . . gene_id "MSTRG.33080"; transcript_id "MSTRG.33080.1"; exon_number "1"; scaffold_17602 StringTie exon 6517 6579 1000 + . gene_id "MSTRG.33088"; transcript_id "MSTRG.33088.1"; exon_number "1"; scaffold_17602 StringTie exon 7023 7187 1000 + . gene_id "MSTRG.33088"; transcript_id "MSTRG.33088.1"; exon_number "2"; scaffold_17602 StringTie exon 7367 7391 1000 + . gene_id "MSTRG.33088"; transcript_id "MSTRG.33088.1"; exon_number "3"; scaffold_1761 StringTie exon 5750 6300 1000 . . gene_id "MSTRG.33091"; transcript_id "MSTRG.33091.1"; exon_number "1"; scaffold_1761 StringTie exon 75919 76276 1000 . . gene_id "MSTRG.33099"; transcript_id "MSTRG.33099.1"; exon_number "1"; scaffold_1761 StringTie exon 146380 146708 1000 . . gene_id "MSTRG.33114"; transcript_id "MSTRG.33114.1"; exon_number "1"; scaffold_1762 StringTie exon 111229 111665 1000 . . gene_id "MSTRG.33131"; transcript_id "MSTRG.33131.1"; exon_number "1"; scaffold_1762 StringTie exon 133457 136203 1000 . . gene_id "MSTRG.33133"; transcript_id "MSTRG.33133.1"; exon_number "1"; scaffold_1763 StringTie exon 150937 151113 1000 - . gene_id "MSTRG.33156"; transcript_id "MSTRG.33156.1"; exon_number "1"; scaffold_1763 StringTie exon 153435 153628 1000 - . gene_id "MSTRG.33156"; transcript_id "MSTRG.33156.1"; exon_number "2"; scaffold_1763 StringTie exon 173325 173569 1000 . . gene_id "MSTRG.33157"; transcript_id "MSTRG.33157.1"; exon_number "1"; scaffold_1764 StringTie exon 143294 143638 1000 . . gene_id "MSTRG.33176"; transcript_id "MSTRG.33176.1"; exon_number "1"; scaffold_1765 StringTie exon 7728 7952 1000 . . gene_id "MSTRG.33194"; transcript_id "MSTRG.33194.1"; exon_number "1"; scaffold_1765 StringTie exon 17876 18466 1000 . . gene_id "MSTRG.33195"; transcript_id "MSTRG.33195.1"; exon_number "1"; scaffold_1766 StringTie exon 103071 103229 1000 + . gene_id "MSTRG.33215"; transcript_id "MSTRG.33215.1"; exon_number "1"; scaffold_1766 StringTie exon 103339 103405 1000 + . gene_id "MSTRG.33215"; transcript_id "MSTRG.33215.1"; exon_number "2"; scaffold_1766 StringTie exon 103995 104104 1000 + . gene_id "MSTRG.33215"; transcript_id "MSTRG.33215.1"; exon_number "3"; scaffold_1766 StringTie exon 104370 104467 1000 + . gene_id "MSTRG.33215"; transcript_id "MSTRG.33215.1"; exon_number "4"; scaffold_1766 StringTie exon 106451 106509 1000 + . gene_id "MSTRG.33215"; transcript_id "MSTRG.33215.1"; exon_number "5"; scaffold_1766 StringTie exon 106607 106676 1000 + . gene_id "MSTRG.33215"; transcript_id "MSTRG.33215.1"; exon_number "6"; scaffold_1766 StringTie exon 106772 106797 1000 + . gene_id "MSTRG.33215"; transcript_id "MSTRG.33215.1"; exon_number "7"; scaffold_1767 StringTie exon 14887 15108 1000 . . gene_id "MSTRG.33228"; transcript_id "MSTRG.33228.1"; exon_number "1"; scaffold_17675 StringTie exon 351 550 1000 . . gene_id "MSTRG.33236"; transcript_id "MSTRG.33236.1"; exon_number "1"; scaffold_17679 StringTie exon 6628 6929 1000 . . gene_id "MSTRG.33239"; transcript_id "MSTRG.33239.1"; exon_number "1"; scaffold_1769 StringTie exon 34763 34967 1000 . . gene_id "MSTRG.33247"; transcript_id "MSTRG.33247.1"; exon_number "1"; scaffold_177 StringTie exon 16930 17282 1000 . . gene_id "MSTRG.33260"; transcript_id "MSTRG.33260.1"; exon_number "1"; scaffold_177 StringTie exon 148350 148483 1000 + . gene_id "MSTRG.33277"; transcript_id "MSTRG.33277.1"; exon_number "1"; scaffold_177 StringTie exon 148642 148717 1000 + . gene_id "MSTRG.33277"; transcript_id "MSTRG.33277.1"; exon_number "2"; scaffold_177 StringTie exon 258809 259294 1000 + . gene_id "MSTRG.33290"; transcript_id "MSTRG.33290.1"; exon_number "1"; scaffold_177 StringTie exon 260326 260428 1000 + . gene_id "MSTRG.33290"; transcript_id "MSTRG.33290.1"; exon_number "2"; scaffold_177 StringTie exon 260522 260590 1000 + . gene_id "MSTRG.33290"; transcript_id "MSTRG.33290.1"; exon_number "3"; scaffold_177 StringTie exon 260690 260740 1000 + . gene_id "MSTRG.33290"; transcript_id "MSTRG.33290.1"; exon_number "4"; scaffold_177 StringTie exon 260830 260896 1000 + . gene_id "MSTRG.33290"; transcript_id "MSTRG.33290.1"; exon_number "5"; scaffold_177 StringTie exon 261150 261257 1000 + . gene_id "MSTRG.33290"; transcript_id "MSTRG.33290.1"; exon_number "6"; scaffold_177 StringTie exon 261390 261455 1000 + . gene_id "MSTRG.33290"; transcript_id "MSTRG.33290.1"; exon_number "7"; scaffold_177 StringTie exon 268278 268317 1000 + . gene_id "MSTRG.33293"; transcript_id "MSTRG.33293.2"; exon_number "1"; scaffold_177 StringTie exon 270874 271108 1000 + . gene_id "MSTRG.33293"; transcript_id "MSTRG.33293.2"; exon_number "2"; scaffold_177 StringTie exon 456991 457221 1000 . . gene_id "MSTRG.33318"; transcript_id "MSTRG.33318.1"; exon_number "1"; scaffold_177 StringTie exon 643988 644245 1000 . . gene_id "MSTRG.33332"; transcript_id "MSTRG.33332.1"; exon_number "1"; scaffold_177 StringTie exon 646345 646771 1000 . . gene_id "MSTRG.33333"; transcript_id "MSTRG.33333.1"; exon_number "1"; scaffold_177 StringTie exon 751579 751945 1000 + . gene_id "MSTRG.33335"; transcript_id "MSTRG.33335.1"; exon_number "1"; scaffold_177 StringTie exon 1012895 1013183 1000 . . gene_id "MSTRG.33356"; transcript_id "MSTRG.33356.1"; exon_number "1"; scaffold_177 StringTie exon 1354944 1355285 1000 . . gene_id "MSTRG.33377"; transcript_id "MSTRG.33377.1"; exon_number "1"; scaffold_1770 StringTie exon 121124 121561 1000 - . gene_id "MSTRG.33388"; transcript_id "MSTRG.33388.1"; exon_number "1"; scaffold_1770 StringTie exon 122381 122553 1000 - . gene_id "MSTRG.33388"; transcript_id "MSTRG.33388.1"; exon_number "2"; scaffold_1770 StringTie exon 123054 123142 1000 - . gene_id "MSTRG.33388"; transcript_id "MSTRG.33388.1"; exon_number "3"; scaffold_1770 StringTie exon 123831 123861 1000 - . gene_id "MSTRG.33388"; transcript_id "MSTRG.33388.1"; exon_number "4"; scaffold_1770 StringTie exon 126268 126421 1000 - . gene_id "MSTRG.33388"; transcript_id "MSTRG.33388.1"; exon_number "5"; scaffold_1772 StringTie exon 13295 13665 1000 . . gene_id "MSTRG.33420"; transcript_id "MSTRG.33420.1"; exon_number "1"; scaffold_1772 StringTie exon 79623 80396 1000 . . gene_id "MSTRG.33429"; transcript_id "MSTRG.33429.1"; exon_number "1"; scaffold_17736 StringTie exon 5144 5466 1000 . . gene_id "MSTRG.33465"; transcript_id "MSTRG.33465.1"; exon_number "1"; scaffold_1776 StringTie exon 58098 58308 1000 . . gene_id "MSTRG.33505"; transcript_id "MSTRG.33505.1"; exon_number "1"; scaffold_1777 StringTie exon 67149 67332 1000 + . gene_id "MSTRG.33530"; transcript_id "MSTRG.33530.1"; exon_number "1"; scaffold_1777 StringTie exon 67498 67659 1000 + . gene_id "MSTRG.33530"; transcript_id "MSTRG.33530.1"; exon_number "2"; scaffold_1777 StringTie exon 67743 67812 1000 + . gene_id "MSTRG.33530"; transcript_id "MSTRG.33530.1"; exon_number "3"; scaffold_1777 StringTie exon 68295 68393 1000 + . gene_id "MSTRG.33531"; transcript_id "MSTRG.33531.1"; exon_number "1"; scaffold_1777 StringTie exon 68509 68871 1000 + . gene_id "MSTRG.33531"; transcript_id "MSTRG.33531.1"; exon_number "2"; scaffold_1778 StringTie exon 154961 155163 1000 . . gene_id "MSTRG.33566"; transcript_id "MSTRG.33566.1"; exon_number "1"; scaffold_1778 StringTie exon 163494 163541 1000 + . gene_id "MSTRG.33567"; transcript_id "MSTRG.33567.2"; exon_number "1"; scaffold_1778 StringTie exon 171422 171475 1000 + . gene_id "MSTRG.33567"; transcript_id "MSTRG.33567.2"; exon_number "2"; scaffold_1778 StringTie exon 171723 171827 1000 + . gene_id "MSTRG.33567"; transcript_id "MSTRG.33567.2"; exon_number "3"; scaffold_1778 StringTie exon 172064 172122 1000 + . gene_id "MSTRG.33567"; transcript_id "MSTRG.33567.2"; exon_number "4"; scaffold_17792 StringTie exon 8910 9206 1000 . . gene_id "MSTRG.33591"; transcript_id "MSTRG.33591.1"; exon_number "1"; scaffold_17793 StringTie exon 5480 5696 1000 . . gene_id "MSTRG.33592"; transcript_id "MSTRG.33592.1"; exon_number "1"; scaffold_178 StringTie exon 759485 759886 1000 . . gene_id "MSTRG.33643"; transcript_id "MSTRG.33643.1"; exon_number "1"; scaffold_178 StringTie exon 847062 847293 1000 . . gene_id "MSTRG.33651"; transcript_id "MSTRG.33651.1"; exon_number "1"; scaffold_178 StringTie exon 862335 862382 1000 - . gene_id "MSTRG.33654"; transcript_id "MSTRG.33654.1"; exon_number "1"; scaffold_178 StringTie exon 877556 877668 1000 - . gene_id "MSTRG.33654"; transcript_id "MSTRG.33654.1"; exon_number "2"; scaffold_178 StringTie exon 878362 878686 1000 - . gene_id "MSTRG.33654"; transcript_id "MSTRG.33654.1"; exon_number "3"; scaffold_178 StringTie exon 887923 887952 1000 - . gene_id "MSTRG.33655"; transcript_id "MSTRG.33655.1"; exon_number "1"; scaffold_178 StringTie exon 888100 888302 1000 - . gene_id "MSTRG.33655"; transcript_id "MSTRG.33655.1"; exon_number "2"; scaffold_178 StringTie exon 935735 936520 1000 . . gene_id "MSTRG.33660"; transcript_id "MSTRG.33660.1"; exon_number "1"; scaffold_178 StringTie exon 937365 937430 1000 - . gene_id "MSTRG.33661"; transcript_id "MSTRG.33661.1"; exon_number "1"; scaffold_178 StringTie exon 939098 939244 1000 - . gene_id "MSTRG.33661"; transcript_id "MSTRG.33661.1"; exon_number "2"; scaffold_178 StringTie exon 939630 939727 1000 - . gene_id "MSTRG.33661"; transcript_id "MSTRG.33661.1"; exon_number "3"; scaffold_178 StringTie exon 939976 940060 1000 - . gene_id "MSTRG.33661"; transcript_id "MSTRG.33661.1"; exon_number "4"; scaffold_178 StringTie exon 944718 944782 1000 - . gene_id "MSTRG.33661"; transcript_id "MSTRG.33661.1"; exon_number "5"; scaffold_178 StringTie exon 944920 945109 1000 - . gene_id "MSTRG.33661"; transcript_id "MSTRG.33661.1"; exon_number "6"; scaffold_178 StringTie exon 946203 946315 1000 - . gene_id "MSTRG.33661"; transcript_id "MSTRG.33661.1"; exon_number "7"; scaffold_178 StringTie exon 1183416 1183659 1000 . . gene_id "MSTRG.33677"; transcript_id "MSTRG.33677.1"; exon_number "1"; scaffold_1780 StringTie exon 49171 49478 1000 . . gene_id "MSTRG.33692"; transcript_id "MSTRG.33692.1"; exon_number "1"; scaffold_1781 StringTie exon 7058 7462 1000 . . gene_id "MSTRG.33711"; transcript_id "MSTRG.33711.1"; exon_number "1"; scaffold_1781 StringTie exon 50038 50334 1000 . . gene_id "MSTRG.33712"; transcript_id "MSTRG.33712.1"; exon_number "1"; scaffold_1782 StringTie exon 35667 39494 1000 - . gene_id "MSTRG.33730"; transcript_id "MSTRG.33730.1"; exon_number "1"; scaffold_1782 StringTie exon 78435 78727 1000 - . gene_id "MSTRG.33737"; transcript_id "MSTRG.33737.1"; exon_number "1"; scaffold_1782 StringTie exon 79726 79875 1000 - . gene_id "MSTRG.33737"; transcript_id "MSTRG.33737.1"; exon_number "2"; scaffold_1782 StringTie exon 85961 86027 1000 - . gene_id "MSTRG.33737"; transcript_id "MSTRG.33737.1"; exon_number "3"; scaffold_1782 StringTie exon 86985 87070 1000 - . gene_id "MSTRG.33737"; transcript_id "MSTRG.33737.1"; exon_number "4"; scaffold_1782 StringTie exon 88750 88962 1000 - . gene_id "MSTRG.33737"; transcript_id "MSTRG.33737.1"; exon_number "5"; scaffold_1782 StringTie exon 91077 91203 1000 - . gene_id "MSTRG.33737"; transcript_id "MSTRG.33737.1"; exon_number "6"; scaffold_17835 StringTie exon 1310 1478 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "1"; scaffold_17835 StringTie exon 1808 1928 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "2"; scaffold_17835 StringTie exon 2276 2359 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "3"; scaffold_17835 StringTie exon 2624 2780 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "4"; scaffold_17835 StringTie exon 3105 3234 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "5"; scaffold_17835 StringTie exon 3485 3609 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "6"; scaffold_17835 StringTie exon 4839 4977 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "7"; scaffold_17835 StringTie exon 6177 6283 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "8"; scaffold_17835 StringTie exon 6755 6926 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "9"; scaffold_17835 StringTie exon 7592 7661 1000 - . gene_id "MSTRG.33774"; transcript_id "MSTRG.33774.1"; exon_number "10"; scaffold_1784 StringTie exon 23749 24137 1000 . . gene_id "MSTRG.33782"; transcript_id "MSTRG.33782.1"; exon_number "1"; scaffold_1784 StringTie exon 104011 104869 1000 . . gene_id "MSTRG.33791"; transcript_id "MSTRG.33791.1"; exon_number "1"; scaffold_1784 StringTie exon 117037 117246 1000 . . gene_id "MSTRG.33793"; transcript_id "MSTRG.33793.1"; exon_number "1"; scaffold_1784 StringTie exon 132884 133110 1000 . . gene_id "MSTRG.33798"; transcript_id "MSTRG.33798.1"; exon_number "1"; scaffold_17845 StringTie exon 1915 2259 1000 . . gene_id "MSTRG.33808"; transcript_id "MSTRG.33808.1"; exon_number "1"; scaffold_17857 StringTie exon 2974 3388 1000 - . gene_id "MSTRG.33824"; transcript_id "MSTRG.33824.1"; exon_number "1"; scaffold_17862 StringTie exon 67 112 1000 - . gene_id "MSTRG.33831"; transcript_id "MSTRG.33831.1"; exon_number "1"; scaffold_17862 StringTie exon 4986 5180 1000 - . gene_id "MSTRG.33831"; transcript_id "MSTRG.33831.1"; exon_number "2"; scaffold_17868 StringTie exon 8705 8917 1000 . . gene_id "MSTRG.33839"; transcript_id "MSTRG.33839.1"; exon_number "1"; scaffold_1788 StringTie exon 140734 141135 1000 . . gene_id "MSTRG.33880"; transcript_id "MSTRG.33880.1"; exon_number "1"; scaffold_179 StringTie exon 106111 107419 1000 . . gene_id "MSTRG.33918"; transcript_id "MSTRG.33918.1"; exon_number "1"; scaffold_179 StringTie exon 278071 278388 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "1"; scaffold_179 StringTie exon 278477 278770 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "2"; scaffold_179 StringTie exon 278933 279079 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "3"; scaffold_179 StringTie exon 279194 279457 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "4"; scaffold_179 StringTie exon 279588 279818 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "5"; scaffold_179 StringTie exon 279916 280005 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "6"; scaffold_179 StringTie exon 280088 280378 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "7"; scaffold_179 StringTie exon 280508 280638 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "8"; scaffold_179 StringTie exon 280795 280999 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "9"; scaffold_179 StringTie exon 281943 282317 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "10"; scaffold_179 StringTie exon 282636 282880 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "11"; scaffold_179 StringTie exon 282992 283130 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "12"; scaffold_179 StringTie exon 283993 284077 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "13"; scaffold_179 StringTie exon 284201 284397 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "14"; scaffold_179 StringTie exon 284535 284650 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "15"; scaffold_179 StringTie exon 284752 284827 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "16"; scaffold_179 StringTie exon 286162 286337 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "17"; scaffold_179 StringTie exon 286620 286814 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "18"; scaffold_179 StringTie exon 286926 286968 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "19"; scaffold_179 StringTie exon 287060 287567 1000 + . gene_id "MSTRG.33929"; transcript_id "MSTRG.33929.1"; exon_number "20"; scaffold_179 StringTie exon 373293 373579 1000 . . gene_id "MSTRG.33941"; transcript_id "MSTRG.33941.1"; exon_number "1"; scaffold_179 StringTie exon 561967 562094 1000 - . gene_id "MSTRG.33955"; transcript_id "MSTRG.33955.1"; exon_number "1"; scaffold_179 StringTie exon 562375 562468 1000 - . gene_id "MSTRG.33955"; transcript_id "MSTRG.33955.1"; exon_number "2"; scaffold_179 StringTie exon 562733 562849 1000 - . gene_id "MSTRG.33955"; transcript_id "MSTRG.33955.1"; exon_number "3"; scaffold_179 StringTie exon 628984 629199 1000 + . gene_id "MSTRG.33971"; transcript_id "MSTRG.33971.1"; exon_number "1"; scaffold_179 StringTie exon 629344 629427 1000 + . gene_id "MSTRG.33971"; transcript_id "MSTRG.33971.1"; exon_number "2"; scaffold_179 StringTie exon 630874 631008 1000 + . gene_id "MSTRG.33971"; transcript_id "MSTRG.33971.1"; exon_number "3"; scaffold_179 StringTie exon 631159 631173 1000 + . gene_id "MSTRG.33971"; transcript_id "MSTRG.33971.1"; exon_number "4"; scaffold_179 StringTie exon 911301 911677 1000 + . gene_id "MSTRG.34001"; transcript_id "MSTRG.34001.1"; exon_number "1"; scaffold_179 StringTie exon 924879 925052 1000 + . gene_id "MSTRG.34001"; transcript_id "MSTRG.34001.1"; exon_number "2"; scaffold_179 StringTie exon 927819 927872 1000 + . gene_id "MSTRG.34001"; transcript_id "MSTRG.34001.1"; exon_number "3"; scaffold_179 StringTie exon 928312 928360 1000 + . gene_id "MSTRG.34001"; transcript_id "MSTRG.34001.1"; exon_number "4"; scaffold_179 StringTie exon 928554 928619 1000 + . gene_id "MSTRG.34001"; transcript_id "MSTRG.34001.1"; exon_number "5"; scaffold_179 StringTie exon 928796 928866 1000 + . gene_id "MSTRG.34001"; transcript_id "MSTRG.34001.1"; exon_number "6"; scaffold_179 StringTie exon 928965 929020 1000 + . gene_id "MSTRG.34001"; transcript_id "MSTRG.34001.1"; exon_number "7"; scaffold_179 StringTie exon 1000827 1001076 1000 . . gene_id "MSTRG.34009"; transcript_id "MSTRG.34009.1"; exon_number "1"; scaffold_179 StringTie exon 1195262 1195649 1000 . . gene_id "MSTRG.34029"; transcript_id "MSTRG.34029.1"; exon_number "1"; scaffold_179 StringTie exon 1285251 1288784 1000 . . gene_id "MSTRG.34038"; transcript_id "MSTRG.34038.1"; exon_number "1"; scaffold_179 StringTie exon 1294609 1295055 1000 . . gene_id "MSTRG.34040"; transcript_id "MSTRG.34040.1"; exon_number "1"; scaffold_17900 StringTie exon 7329 7640 1000 . . gene_id "MSTRG.34067"; transcript_id "MSTRG.34067.1"; exon_number "1"; scaffold_1791 StringTie exon 3360 3765 1000 . . gene_id "MSTRG.34076"; transcript_id "MSTRG.34076.1"; exon_number "1"; scaffold_1792 StringTie exon 115746 115964 1000 . . gene_id "MSTRG.34113"; transcript_id "MSTRG.34113.1"; exon_number "1"; scaffold_1792 StringTie exon 119558 119798 1000 . . gene_id "MSTRG.34114"; transcript_id "MSTRG.34114.1"; exon_number "1"; scaffold_1794 StringTie exon 42151 42680 1000 . . gene_id "MSTRG.34142"; transcript_id "MSTRG.34142.1"; exon_number "1"; scaffold_17944 StringTie exon 8618 9026 1000 . . gene_id "MSTRG.34153"; transcript_id "MSTRG.34153.1"; exon_number "1"; scaffold_1795 StringTie exon 24794 24982 1000 + . gene_id "MSTRG.34160"; transcript_id "MSTRG.34160.2"; exon_number "1"; scaffold_1795 StringTie exon 25169 25352 1000 + . gene_id "MSTRG.34160"; transcript_id "MSTRG.34160.2"; exon_number "2"; scaffold_1795 StringTie exon 125300 125643 1000 . . gene_id "MSTRG.34179"; transcript_id "MSTRG.34179.1"; exon_number "1"; scaffold_1795 StringTie exon 168312 168543 1000 . . gene_id "MSTRG.34184"; transcript_id "MSTRG.34184.1"; exon_number "1"; scaffold_17958 StringTie exon 163 241 1000 - . gene_id "MSTRG.34188"; transcript_id "MSTRG.34188.1"; exon_number "1"; scaffold_17958 StringTie exon 6608 6814 1000 - . gene_id "MSTRG.34188"; transcript_id "MSTRG.34188.1"; exon_number "2"; scaffold_17958 StringTie exon 7536 7700 1000 - . gene_id "MSTRG.34188"; transcript_id "MSTRG.34188.1"; exon_number "3"; scaffold_17958 StringTie exon 7915 8061 1000 - . gene_id "MSTRG.34188"; transcript_id "MSTRG.34188.1"; exon_number "4"; scaffold_17969 StringTie exon 8849 9083 1000 . . gene_id "MSTRG.34208"; transcript_id "MSTRG.34208.1"; exon_number "1"; scaffold_1797 StringTie exon 19291 20379 1000 . . gene_id "MSTRG.34210"; transcript_id "MSTRG.34210.1"; exon_number "1"; scaffold_1798 StringTie exon 70684 71149 1000 . . gene_id "MSTRG.34228"; transcript_id "MSTRG.34228.1"; exon_number "1"; scaffold_1798 StringTie exon 83818 83883 1000 - . gene_id "MSTRG.34231"; transcript_id "MSTRG.34231.1"; exon_number "1"; scaffold_1798 StringTie exon 84126 84227 1000 - . gene_id "MSTRG.34231"; transcript_id "MSTRG.34231.1"; exon_number "2"; scaffold_1798 StringTie exon 84662 84767 1000 - . gene_id "MSTRG.34231"; transcript_id "MSTRG.34231.1"; exon_number "3"; scaffold_1798 StringTie exon 85090 85216 1000 - . gene_id "MSTRG.34231"; transcript_id "MSTRG.34231.1"; exon_number "4"; scaffold_1798 StringTie exon 97355 97467 1000 - . gene_id "MSTRG.34231"; transcript_id "MSTRG.34231.1"; exon_number "5"; scaffold_1798 StringTie exon 168914 169193 1000 . . gene_id "MSTRG.34237"; transcript_id "MSTRG.34237.1"; exon_number "1"; scaffold_18 StringTie exon 62980 63181 1000 . . gene_id "MSTRG.34274"; transcript_id "MSTRG.34274.1"; exon_number "1"; scaffold_18 StringTie exon 79347 79889 1000 . . gene_id "MSTRG.34277"; transcript_id "MSTRG.34277.1"; exon_number "1"; scaffold_18 StringTie exon 300671 301253 1000 . . gene_id "MSTRG.34295"; transcript_id "MSTRG.34295.1"; exon_number "1"; scaffold_18 StringTie exon 316786 316973 1000 - . gene_id "MSTRG.34302"; transcript_id "MSTRG.34302.1"; exon_number "1"; scaffold_18 StringTie exon 317067 317161 1000 - . gene_id "MSTRG.34302"; transcript_id "MSTRG.34302.1"; exon_number "2"; scaffold_18 StringTie exon 317248 317441 1000 - . gene_id "MSTRG.34302"; transcript_id "MSTRG.34302.1"; exon_number "3"; scaffold_18 StringTie exon 317571 317784 1000 - . gene_id "MSTRG.34302"; transcript_id "MSTRG.34302.1"; exon_number "4"; scaffold_18 StringTie exon 318275 318406 1000 - . gene_id "MSTRG.34302"; transcript_id "MSTRG.34302.1"; exon_number "5"; scaffold_18 StringTie exon 318735 318996 1000 - . gene_id "MSTRG.34302"; transcript_id "MSTRG.34302.1"; exon_number "6"; scaffold_18 StringTie exon 319341 319420 1000 - . gene_id "MSTRG.34302"; transcript_id "MSTRG.34302.1"; exon_number "7"; scaffold_18 StringTie exon 319583 319689 1000 - . gene_id "MSTRG.34302"; transcript_id "MSTRG.34302.1"; exon_number "8"; scaffold_18 StringTie exon 442923 442967 1000 + . gene_id "MSTRG.34315"; transcript_id "MSTRG.34315.1"; exon_number "1"; scaffold_18 StringTie exon 445125 445267 1000 + . gene_id "MSTRG.34315"; transcript_id "MSTRG.34315.1"; exon_number "2"; scaffold_18 StringTie exon 445828 445925 1000 + . gene_id "MSTRG.34315"; transcript_id "MSTRG.34315.1"; exon_number "3"; scaffold_18 StringTie exon 466871 467023 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "1"; scaffold_18 StringTie exon 467235 467375 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "2"; scaffold_18 StringTie exon 467670 467809 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "3"; scaffold_18 StringTie exon 471593 471726 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "4"; scaffold_18 StringTie exon 472125 472238 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "5"; scaffold_18 StringTie exon 472410 472556 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "6"; scaffold_18 StringTie exon 474343 474468 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "7"; scaffold_18 StringTie exon 475536 475932 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "8"; scaffold_18 StringTie exon 476153 476239 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "9"; scaffold_18 StringTie exon 481094 481209 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "10"; scaffold_18 StringTie exon 482922 482988 1000 - . gene_id "MSTRG.34319"; transcript_id "MSTRG.34319.2"; exon_number "11"; scaffold_18 StringTie exon 751569 751777 1000 . . gene_id "MSTRG.34347"; transcript_id "MSTRG.34347.1"; exon_number "1"; scaffold_18 StringTie exon 873339 873591 1000 . . gene_id "MSTRG.34359"; transcript_id "MSTRG.34359.1"; exon_number "1"; scaffold_18 StringTie exon 940987 941073 1000 + . gene_id "MSTRG.34365"; transcript_id "MSTRG.34365.1"; exon_number "1"; scaffold_18 StringTie exon 941293 941513 1000 + . gene_id "MSTRG.34365"; transcript_id "MSTRG.34365.1"; exon_number "2"; scaffold_18 StringTie exon 1007717 1007955 1000 . . gene_id "MSTRG.34371"; transcript_id "MSTRG.34371.1"; exon_number "1"; scaffold_18 StringTie exon 1021727 1021943 1000 . . gene_id "MSTRG.34373"; transcript_id "MSTRG.34373.1"; exon_number "1"; scaffold_18 StringTie exon 1137344 1137580 1000 . . gene_id "MSTRG.34379"; transcript_id "MSTRG.34379.1"; exon_number "1"; scaffold_18 StringTie exon 1364853 1365064 1000 . . gene_id "MSTRG.34393"; transcript_id "MSTRG.34393.1"; exon_number "1"; scaffold_18 StringTie exon 1530976 1531517 1000 . . gene_id "MSTRG.34404"; transcript_id "MSTRG.34404.1"; exon_number "1"; scaffold_18 StringTie exon 1772949 1772996 1000 + . gene_id "MSTRG.34416"; transcript_id "MSTRG.34416.1"; exon_number "1"; scaffold_18 StringTie exon 1773111 1773164 1000 + . gene_id "MSTRG.34416"; transcript_id "MSTRG.34416.1"; exon_number "2"; scaffold_18 StringTie exon 1773419 1773543 1000 + . gene_id "MSTRG.34416"; transcript_id "MSTRG.34416.1"; exon_number "3"; scaffold_18 StringTie exon 1774051 1774101 1000 + . gene_id "MSTRG.34416"; transcript_id "MSTRG.34416.1"; exon_number "4"; scaffold_18 StringTie exon 1774223 1774321 1000 + . gene_id "MSTRG.34416"; transcript_id "MSTRG.34416.1"; exon_number "5"; scaffold_18 StringTie exon 1774694 1774763 1000 + . gene_id "MSTRG.34416"; transcript_id "MSTRG.34416.1"; exon_number "6"; scaffold_18 StringTie exon 1774861 1775055 1000 + . gene_id "MSTRG.34416"; transcript_id "MSTRG.34416.1"; exon_number "7"; scaffold_18 StringTie exon 1775313 1775363 1000 + . gene_id "MSTRG.34416"; transcript_id "MSTRG.34416.1"; exon_number "8"; scaffold_18 StringTie exon 2016968 2017169 1000 . . gene_id "MSTRG.34428"; transcript_id "MSTRG.34428.1"; exon_number "1"; scaffold_18 StringTie exon 2096740 2097089 1000 . . gene_id "MSTRG.34439"; transcript_id "MSTRG.34439.1"; exon_number "1"; scaffold_18 StringTie exon 2105262 2105331 1000 - . gene_id "MSTRG.34440"; transcript_id "MSTRG.34440.1"; exon_number "1"; scaffold_18 StringTie exon 2109019 2109178 1000 - . gene_id "MSTRG.34440"; transcript_id "MSTRG.34440.1"; exon_number "2"; scaffold_18 StringTie exon 2106392 2106593 1000 . . gene_id "MSTRG.34441"; transcript_id "MSTRG.34441.1"; exon_number "1"; scaffold_18 StringTie exon 2165654 2165861 1000 . . gene_id "MSTRG.34444"; transcript_id "MSTRG.34444.1"; exon_number "1"; scaffold_18 StringTie exon 2676498 2676712 1000 . . gene_id "MSTRG.34473"; transcript_id "MSTRG.34473.1"; exon_number "1"; scaffold_180 StringTie exon 87419 88006 1000 . . gene_id "MSTRG.34494"; transcript_id "MSTRG.34494.1"; exon_number "1"; scaffold_180 StringTie exon 88564 89730 1000 . . gene_id "MSTRG.34495"; transcript_id "MSTRG.34495.1"; exon_number "1"; scaffold_180 StringTie exon 378071 378815 1000 . . gene_id "MSTRG.34516"; transcript_id "MSTRG.34516.1"; exon_number "1"; scaffold_180 StringTie exon 663507 663956 1000 . . gene_id "MSTRG.34527"; transcript_id "MSTRG.34527.1"; exon_number "1"; scaffold_180 StringTie exon 683738 683870 1000 + . gene_id "MSTRG.34529"; transcript_id "MSTRG.34529.1"; exon_number "1"; scaffold_180 StringTie exon 685176 685249 1000 + . gene_id "MSTRG.34529"; transcript_id "MSTRG.34529.1"; exon_number "2"; scaffold_180 StringTie exon 825027 825743 1000 . . gene_id "MSTRG.34543"; transcript_id "MSTRG.34543.1"; exon_number "1"; scaffold_180 StringTie exon 917895 918239 1000 . . gene_id "MSTRG.34550"; transcript_id "MSTRG.34550.1"; exon_number "1"; scaffold_180 StringTie exon 1013233 1013508 1000 . . gene_id "MSTRG.34564"; transcript_id "MSTRG.34564.1"; exon_number "1"; scaffold_180 StringTie exon 1106688 1106989 1000 . . gene_id "MSTRG.34573"; transcript_id "MSTRG.34573.1"; exon_number "1"; scaffold_180 StringTie exon 1110992 1111406 1000 . . gene_id "MSTRG.34575"; transcript_id "MSTRG.34575.1"; exon_number "1"; scaffold_180 StringTie exon 1118425 1118763 1000 - . gene_id "MSTRG.34577"; transcript_id "MSTRG.34577.1"; exon_number "1"; scaffold_180 StringTie exon 1120798 1120908 1000 - . gene_id "MSTRG.34577"; transcript_id "MSTRG.34577.1"; exon_number "2"; scaffold_1800 StringTie exon 8414 8809 1000 - . gene_id "MSTRG.34604"; transcript_id "MSTRG.34604.1"; exon_number "1"; scaffold_1800 StringTie exon 10858 10888 1000 - . gene_id "MSTRG.34604"; transcript_id "MSTRG.34604.1"; exon_number "2"; scaffold_1800 StringTie exon 76115 76202 1000 + . gene_id "MSTRG.34618"; transcript_id "MSTRG.34618.1"; exon_number "1"; scaffold_1800 StringTie exon 76570 77118 1000 + . gene_id "MSTRG.34618"; transcript_id "MSTRG.34618.1"; exon_number "2"; scaffold_1800 StringTie exon 152204 152246 1000 - . gene_id "MSTRG.34627"; transcript_id "MSTRG.34627.1"; exon_number "1"; scaffold_1800 StringTie exon 152507 152808 1000 - . gene_id "MSTRG.34627"; transcript_id "MSTRG.34627.1"; exon_number "2"; scaffold_18016 StringTie exon 1010 1209 1000 . . gene_id "MSTRG.34662"; transcript_id "MSTRG.34662.1"; exon_number "1"; scaffold_1802 StringTie exon 7487 7702 1000 . . gene_id "MSTRG.34665"; transcript_id "MSTRG.34665.1"; exon_number "1"; scaffold_18029 StringTie exon 4407 4648 1000 . . gene_id "MSTRG.34674"; transcript_id "MSTRG.34674.1"; exon_number "1"; scaffold_1803 StringTie exon 84481 84773 1000 . . gene_id "MSTRG.34682"; transcript_id "MSTRG.34682.1"; exon_number "1"; scaffold_1803 StringTie exon 120720 120974 1000 . . gene_id "MSTRG.34689"; transcript_id "MSTRG.34689.1"; exon_number "1"; scaffold_18037 StringTie exon 6844 7159 1000 . . gene_id "MSTRG.34697"; transcript_id "MSTRG.34697.1"; exon_number "1"; scaffold_1804 StringTie exon 49563 51018 1000 + . gene_id "MSTRG.34710"; transcript_id "MSTRG.34710.3"; exon_number "1"; scaffold_1804 StringTie exon 51105 51184 1000 + . gene_id "MSTRG.34710"; transcript_id "MSTRG.34710.3"; exon_number "2"; scaffold_18046 StringTie exon 6249 6805 1000 . . gene_id "MSTRG.34724"; transcript_id "MSTRG.34724.1"; exon_number "1"; scaffold_1805 StringTie exon 29901 30274 1000 - . gene_id "MSTRG.34727"; transcript_id "MSTRG.34727.2"; exon_number "1"; scaffold_1805 StringTie exon 32964 33140 1000 - . gene_id "MSTRG.34727"; transcript_id "MSTRG.34727.2"; exon_number "2"; scaffold_1805 StringTie exon 36543 36770 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "1"; scaffold_1805 StringTie exon 37266 37393 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "2"; scaffold_1805 StringTie exon 37499 37649 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "3"; scaffold_1805 StringTie exon 37829 37922 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "4"; scaffold_1805 StringTie exon 38033 38101 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "5"; scaffold_1805 StringTie exon 43012 43186 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "6"; scaffold_1805 StringTie exon 43557 43670 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "7"; scaffold_1805 StringTie exon 52548 52639 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "8"; scaffold_1805 StringTie exon 54079 54255 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "9"; scaffold_1805 StringTie exon 55800 55948 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "10"; scaffold_1805 StringTie exon 56085 56854 1000 + . gene_id "MSTRG.34728"; transcript_id "MSTRG.34728.1"; exon_number "11"; scaffold_1806 StringTie exon 160025 160262 1000 . . gene_id "MSTRG.34754"; transcript_id "MSTRG.34754.1"; exon_number "1"; scaffold_18070 StringTie exon 523 1004 1000 + . gene_id "MSTRG.34772"; transcript_id "MSTRG.34772.1"; exon_number "1"; scaffold_18070 StringTie exon 1442 1535 1000 + . gene_id "MSTRG.34772"; transcript_id "MSTRG.34772.1"; exon_number "2"; scaffold_181 StringTie exon 511657 512010 1000 . . gene_id "MSTRG.34857"; transcript_id "MSTRG.34857.1"; exon_number "1"; scaffold_181 StringTie exon 1022094 1022358 1000 . . gene_id "MSTRG.34890"; transcript_id "MSTRG.34890.1"; exon_number "1"; scaffold_1810 StringTie exon 29811 30053 1000 . . gene_id "MSTRG.34914"; transcript_id "MSTRG.34914.1"; exon_number "1"; scaffold_1811 StringTie exon 39323 39725 1000 + . gene_id "MSTRG.34944"; transcript_id "MSTRG.34944.1"; exon_number "1"; scaffold_1811 StringTie exon 40143 40254 1000 + . gene_id "MSTRG.34944"; transcript_id "MSTRG.34944.1"; exon_number "2"; scaffold_1811 StringTie exon 40563 40598 1000 + . gene_id "MSTRG.34944"; transcript_id "MSTRG.34944.1"; exon_number "3"; scaffold_1811 StringTie exon 40733 40786 1000 + . gene_id "MSTRG.34944"; transcript_id "MSTRG.34944.1"; exon_number "4"; scaffold_1811 StringTie exon 41030 41158 1000 + . gene_id "MSTRG.34944"; transcript_id "MSTRG.34944.1"; exon_number "5"; scaffold_1811 StringTie exon 41294 41453 1000 + . gene_id "MSTRG.34944"; transcript_id "MSTRG.34944.1"; exon_number "6"; scaffold_1811 StringTie exon 41664 41714 1000 + . gene_id "MSTRG.34944"; transcript_id "MSTRG.34944.1"; exon_number "7"; scaffold_18111 StringTie exon 41 689 1000 + . gene_id "MSTRG.34953"; transcript_id "MSTRG.34953.1"; exon_number "1"; scaffold_18111 StringTie exon 780 1017 1000 + . gene_id "MSTRG.34953"; transcript_id "MSTRG.34953.1"; exon_number "2"; scaffold_18111 StringTie exon 7073 7143 1000 + . gene_id "MSTRG.34953"; transcript_id "MSTRG.34953.1"; exon_number "3"; scaffold_1812 StringTie exon 117811 120069 1000 . . gene_id "MSTRG.34964"; transcript_id "MSTRG.34964.1"; exon_number "1"; scaffold_18128 StringTie exon 6129 6400 1000 . . gene_id "MSTRG.34973"; transcript_id "MSTRG.34973.1"; exon_number "1"; scaffold_1814 StringTie exon 125772 126319 1000 - . gene_id "MSTRG.34987"; transcript_id "MSTRG.34987.3"; exon_number "1"; scaffold_1814 StringTie exon 127027 127307 1000 - . gene_id "MSTRG.34987"; transcript_id "MSTRG.34987.3"; exon_number "2"; scaffold_1814 StringTie exon 128492 128577 1000 - . gene_id "MSTRG.34987"; transcript_id "MSTRG.34987.3"; exon_number "3"; scaffold_1814 StringTie exon 129883 130158 1000 - . gene_id "MSTRG.34987"; transcript_id "MSTRG.34987.3"; exon_number "4"; scaffold_1814 StringTie exon 130457 130546 1000 - . gene_id "MSTRG.34987"; transcript_id "MSTRG.34987.3"; exon_number "5"; scaffold_1814 StringTie exon 130700 130733 1000 - . gene_id "MSTRG.34987"; transcript_id "MSTRG.34987.3"; exon_number "6"; scaffold_1814 StringTie exon 131006 131069 1000 - . gene_id "MSTRG.34987"; transcript_id "MSTRG.34987.3"; exon_number "7"; scaffold_1814 StringTie exon 135396 135643 1000 - . gene_id "MSTRG.34987"; transcript_id "MSTRG.34987.3"; exon_number "8"; scaffold_1815 StringTie exon 42513 42743 1000 . . gene_id "MSTRG.34998"; transcript_id "MSTRG.34998.1"; exon_number "1"; scaffold_1815 StringTie exon 115086 115435 1000 . . gene_id "MSTRG.35005"; transcript_id "MSTRG.35005.1"; exon_number "1"; scaffold_1817 StringTie exon 77215 77763 1000 . . gene_id "MSTRG.35052"; transcript_id "MSTRG.35052.1"; exon_number "1"; scaffold_182 StringTie exon 110411 110594 1000 + . gene_id "MSTRG.35093"; transcript_id "MSTRG.35093.1"; exon_number "1"; scaffold_182 StringTie exon 112640 113249 1000 + . gene_id "MSTRG.35093"; transcript_id "MSTRG.35093.1"; exon_number "2"; scaffold_182 StringTie exon 498046 498386 1000 . . gene_id "MSTRG.35133"; transcript_id "MSTRG.35133.1"; exon_number "1"; scaffold_182 StringTie exon 964239 964483 1000 . . gene_id "MSTRG.35167"; transcript_id "MSTRG.35167.1"; exon_number "1"; scaffold_182 StringTie exon 1057980 1058149 1000 + . gene_id "MSTRG.35173"; transcript_id "MSTRG.35173.1"; exon_number "1"; scaffold_182 StringTie exon 1058382 1058502 1000 + . gene_id "MSTRG.35173"; transcript_id "MSTRG.35173.1"; exon_number "2"; scaffold_182 StringTie exon 1063762 1064286 1000 . . gene_id "MSTRG.35174"; transcript_id "MSTRG.35174.1"; exon_number "1"; scaffold_182 StringTie exon 1199867 1200066 1000 - . gene_id "MSTRG.35185"; transcript_id "MSTRG.35185.1"; exon_number "1"; scaffold_182 StringTie exon 1200430 1200598 1000 - . gene_id "MSTRG.35185"; transcript_id "MSTRG.35185.1"; exon_number "2"; scaffold_182 StringTie exon 1201338 1201539 1000 - . gene_id "MSTRG.35185"; transcript_id "MSTRG.35185.1"; exon_number "3"; scaffold_182 StringTie exon 1238094 1238981 1000 . . gene_id "MSTRG.35190"; transcript_id "MSTRG.35190.1"; exon_number "1"; scaffold_182 StringTie exon 1344212 1344460 1000 . . gene_id "MSTRG.35194"; transcript_id "MSTRG.35194.1"; exon_number "1"; scaffold_1822 StringTie exon 33477 33844 1000 + . gene_id "MSTRG.35225"; transcript_id "MSTRG.35225.1"; exon_number "1"; scaffold_1822 StringTie exon 35835 36085 1000 + . gene_id "MSTRG.35225"; transcript_id "MSTRG.35225.1"; exon_number "2"; scaffold_1822 StringTie exon 119349 119673 1000 . . gene_id "MSTRG.35229"; transcript_id "MSTRG.35229.1"; exon_number "1"; scaffold_18237 StringTie exon 8123 8333 1000 . . gene_id "MSTRG.35260"; transcript_id "MSTRG.35260.1"; exon_number "1"; scaffold_18238 StringTie exon 58 912 1000 . . gene_id "MSTRG.35261"; transcript_id "MSTRG.35261.1"; exon_number "1"; scaffold_1825 StringTie exon 33421 33747 1000 + . gene_id "MSTRG.35277"; transcript_id "MSTRG.35277.1"; exon_number "1"; scaffold_1825 StringTie exon 38754 38834 1000 + . gene_id "MSTRG.35277"; transcript_id "MSTRG.35277.1"; exon_number "2"; scaffold_1825 StringTie exon 48804 48879 1000 + . gene_id "MSTRG.35277"; transcript_id "MSTRG.35277.1"; exon_number "3"; scaffold_1825 StringTie exon 54769 54845 1000 + . gene_id "MSTRG.35277"; transcript_id "MSTRG.35277.1"; exon_number "4"; scaffold_1825 StringTie exon 69228 69246 1000 + . gene_id "MSTRG.35277"; transcript_id "MSTRG.35277.1"; exon_number "5"; scaffold_1825 StringTie exon 89372 90511 1000 . . gene_id "MSTRG.35280"; transcript_id "MSTRG.35280.1"; exon_number "1"; scaffold_1825 StringTie exon 93997 94606 1000 . . gene_id "MSTRG.35282"; transcript_id "MSTRG.35282.1"; exon_number "1"; scaffold_1826 StringTie exon 65789 65923 1000 + . gene_id "MSTRG.35303"; transcript_id "MSTRG.35303.1"; exon_number "1"; scaffold_1826 StringTie exon 67578 67755 1000 + . gene_id "MSTRG.35303"; transcript_id "MSTRG.35303.1"; exon_number "2"; scaffold_18269 StringTie exon 376 635 1000 . . gene_id "MSTRG.35322"; transcript_id "MSTRG.35322.1"; exon_number "1"; scaffold_18285 StringTie exon 8266 8546 1000 . . gene_id "MSTRG.35362"; transcript_id "MSTRG.35362.1"; exon_number "1"; scaffold_1829 StringTie exon 22441 22659 1000 . . gene_id "MSTRG.35369"; transcript_id "MSTRG.35369.1"; exon_number "1"; scaffold_1829 StringTie exon 70526 70839 1000 . . gene_id "MSTRG.35379"; transcript_id "MSTRG.35379.1"; exon_number "1"; scaffold_18298 StringTie exon 7739 8363 1000 . . gene_id "MSTRG.35390"; transcript_id "MSTRG.35390.1"; exon_number "1"; scaffold_183 StringTie exon 10945 11255 1000 . . gene_id "MSTRG.35392"; transcript_id "MSTRG.35392.1"; exon_number "1"; scaffold_183 StringTie exon 271997 272371 1000 . . gene_id "MSTRG.35398"; transcript_id "MSTRG.35398.1"; exon_number "1"; scaffold_183 StringTie exon 997513 997777 1000 . . gene_id "MSTRG.35435"; transcript_id "MSTRG.35435.1"; exon_number "1"; scaffold_1831 StringTie exon 6788 7317 1000 . . gene_id "MSTRG.35463"; transcript_id "MSTRG.35463.1"; exon_number "1"; scaffold_1831 StringTie exon 37594 37828 1000 . . gene_id "MSTRG.35467"; transcript_id "MSTRG.35467.1"; exon_number "1"; scaffold_1831 StringTie exon 139857 140092 1000 . . gene_id "MSTRG.35474"; transcript_id "MSTRG.35474.1"; exon_number "1"; scaffold_1832 StringTie exon 133154 133584 1000 . . gene_id "MSTRG.35493"; transcript_id "MSTRG.35493.1"; exon_number "1"; scaffold_1833 StringTie exon 43056 43313 1000 + . gene_id "MSTRG.35508"; transcript_id "MSTRG.35508.2"; exon_number "1"; scaffold_1833 StringTie exon 52692 52741 1000 + . gene_id "MSTRG.35508"; transcript_id "MSTRG.35508.2"; exon_number "2"; scaffold_1833 StringTie exon 52835 52931 1000 + . gene_id "MSTRG.35508"; transcript_id "MSTRG.35508.2"; exon_number "3"; scaffold_1833 StringTie exon 53117 53163 1000 + . gene_id "MSTRG.35508"; transcript_id "MSTRG.35508.2"; exon_number "4"; scaffold_1833 StringTie exon 58793 58942 1000 + . gene_id "MSTRG.35508"; transcript_id "MSTRG.35508.2"; exon_number "5"; scaffold_1833 StringTie exon 59031 59177 1000 + . gene_id "MSTRG.35508"; transcript_id "MSTRG.35508.2"; exon_number "6"; scaffold_1833 StringTie exon 68149 68948 1000 + . gene_id "MSTRG.35508"; transcript_id "MSTRG.35508.2"; exon_number "7"; scaffold_18343 StringTie exon 1087 1350 1000 - . gene_id "MSTRG.35531"; transcript_id "MSTRG.35531.1"; exon_number "1"; scaffold_18348 StringTie exon 152 900 1000 + . gene_id "MSTRG.35537"; transcript_id "MSTRG.35537.1"; exon_number "1"; scaffold_1835 StringTie exon 94667 95023 1000 . . gene_id "MSTRG.35549"; transcript_id "MSTRG.35549.1"; exon_number "1"; scaffold_18350 StringTie exon 91 385 1000 . . gene_id "MSTRG.35553"; transcript_id "MSTRG.35553.1"; exon_number "1"; scaffold_18351 StringTie exon 8640 8924 1000 . . gene_id "MSTRG.35555"; transcript_id "MSTRG.35555.1"; exon_number "1"; scaffold_1837 StringTie exon 126695 126982 1000 . . gene_id "MSTRG.35587"; transcript_id "MSTRG.35587.1"; exon_number "1"; scaffold_1838 StringTie exon 85893 86317 1000 . . gene_id "MSTRG.35599"; transcript_id "MSTRG.35599.1"; exon_number "1"; scaffold_1838 StringTie exon 148952 149250 1000 . . gene_id "MSTRG.35602"; transcript_id "MSTRG.35602.1"; exon_number "1"; scaffold_18386 StringTie exon 7518 7739 1000 . . gene_id "MSTRG.35608"; transcript_id "MSTRG.35608.1"; exon_number "1"; scaffold_184 StringTie exon 566645 566870 1000 . . gene_id "MSTRG.35653"; transcript_id "MSTRG.35653.1"; exon_number "1"; scaffold_184 StringTie exon 572057 573068 1000 - . gene_id "MSTRG.35655"; transcript_id "MSTRG.35655.1"; exon_number "1"; scaffold_184 StringTie exon 573269 573342 1000 - . gene_id "MSTRG.35655"; transcript_id "MSTRG.35655.1"; exon_number "2"; scaffold_184 StringTie exon 573506 573605 1000 - . gene_id "MSTRG.35655"; transcript_id "MSTRG.35655.1"; exon_number "3"; scaffold_184 StringTie exon 580396 580489 1000 - . gene_id "MSTRG.35655"; transcript_id "MSTRG.35655.1"; exon_number "4"; scaffold_184 StringTie exon 580977 581084 1000 - . gene_id "MSTRG.35655"; transcript_id "MSTRG.35655.1"; exon_number "5"; scaffold_184 StringTie exon 582230 582242 1000 - . gene_id "MSTRG.35655"; transcript_id "MSTRG.35655.1"; exon_number "6"; scaffold_184 StringTie exon 593527 593615 1000 - . gene_id "MSTRG.35656"; transcript_id "MSTRG.35656.2"; exon_number "1"; scaffold_184 StringTie exon 593905 594066 1000 - . gene_id "MSTRG.35656"; transcript_id "MSTRG.35656.2"; exon_number "2"; scaffold_184 StringTie exon 839357 839639 1000 . . gene_id "MSTRG.35668"; transcript_id "MSTRG.35668.1"; exon_number "1"; scaffold_184 StringTie exon 850598 851207 1000 - . gene_id "MSTRG.35669"; transcript_id "MSTRG.35669.1"; exon_number "1"; scaffold_184 StringTie exon 869669 869991 1000 - . gene_id "MSTRG.35669"; transcript_id "MSTRG.35669.1"; exon_number "2"; scaffold_184 StringTie exon 983535 983656 1000 - . gene_id "MSTRG.35672"; transcript_id "MSTRG.35672.1"; exon_number "1"; scaffold_184 StringTie exon 983751 983889 1000 - . gene_id "MSTRG.35672"; transcript_id "MSTRG.35672.1"; exon_number "2"; scaffold_184 StringTie exon 1153851 1154244 1000 . . gene_id "MSTRG.35684"; transcript_id "MSTRG.35684.1"; exon_number "1"; scaffold_184 StringTie exon 1154614 1155102 1000 . . gene_id "MSTRG.35685"; transcript_id "MSTRG.35685.1"; exon_number "1"; scaffold_184 StringTie exon 1310647 1310857 1000 . . gene_id "MSTRG.35697"; transcript_id "MSTRG.35697.1"; exon_number "1"; scaffold_184 StringTie exon 1322872 1323086 1000 . . gene_id "MSTRG.35698"; transcript_id "MSTRG.35698.1"; exon_number "1"; scaffold_1840 StringTie exon 65109 65502 1000 . . gene_id "MSTRG.35700"; transcript_id "MSTRG.35700.1"; exon_number "1"; scaffold_1842 StringTie exon 15236 15454 1000 . . gene_id "MSTRG.35744"; transcript_id "MSTRG.35744.1"; exon_number "1"; scaffold_1842 StringTie exon 42754 43158 1000 . . gene_id "MSTRG.35745"; transcript_id "MSTRG.35745.1"; exon_number "1"; scaffold_1842 StringTie exon 126760 126850 1000 - . gene_id "MSTRG.35752"; transcript_id "MSTRG.35752.1"; exon_number "1"; scaffold_1842 StringTie exon 126994 127240 1000 - . gene_id "MSTRG.35752"; transcript_id "MSTRG.35752.1"; exon_number "2"; scaffold_1842 StringTie exon 128616 128677 1000 - . gene_id "MSTRG.35752"; transcript_id "MSTRG.35752.1"; exon_number "3"; scaffold_1842 StringTie exon 128800 128911 1000 - . gene_id "MSTRG.35752"; transcript_id "MSTRG.35752.1"; exon_number "4"; scaffold_1842 StringTie exon 130923 131010 1000 - . gene_id "MSTRG.35752"; transcript_id "MSTRG.35752.1"; exon_number "5"; scaffold_18433 StringTie exon 1605 1973 1000 . . gene_id "MSTRG.35773"; transcript_id "MSTRG.35773.1"; exon_number "1"; scaffold_18444 StringTie exon 2193 2702 1000 - . gene_id "MSTRG.35794"; transcript_id "MSTRG.35794.1"; exon_number "1"; scaffold_18454 StringTie exon 8596 8808 1000 . . gene_id "MSTRG.35820"; transcript_id "MSTRG.35820.1"; exon_number "1"; scaffold_1846 StringTie exon 57481 57664 1000 - . gene_id "MSTRG.35829"; transcript_id "MSTRG.35829.1"; exon_number "1"; scaffold_1846 StringTie exon 78155 78210 1000 - . gene_id "MSTRG.35829"; transcript_id "MSTRG.35829.1"; exon_number "2"; scaffold_18463 StringTie exon 2107 2325 1000 . . gene_id "MSTRG.35840"; transcript_id "MSTRG.35840.1"; exon_number "1"; scaffold_1847 StringTie exon 87110 87807 1000 + . gene_id "MSTRG.35854"; transcript_id "MSTRG.35854.1"; exon_number "1"; scaffold_1847 StringTie exon 101347 101487 1000 + . gene_id "MSTRG.35854"; transcript_id "MSTRG.35854.1"; exon_number "2"; scaffold_18476 StringTie exon 6262 6558 1000 . . gene_id "MSTRG.35865"; transcript_id "MSTRG.35865.1"; exon_number "1"; scaffold_1848 StringTie exon 116895 117050 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "1"; scaffold_1848 StringTie exon 117966 118102 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "2"; scaffold_1848 StringTie exon 118206 118377 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "3"; scaffold_1848 StringTie exon 119141 119243 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "4"; scaffold_1848 StringTie exon 119379 119473 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "5"; scaffold_1848 StringTie exon 119585 119683 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "6"; scaffold_1848 StringTie exon 119774 119974 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "7"; scaffold_1848 StringTie exon 120144 120247 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "8"; scaffold_1848 StringTie exon 120436 120520 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "9"; scaffold_1848 StringTie exon 120620 120644 1000 - . gene_id "MSTRG.35881"; transcript_id "MSTRG.35881.1"; exon_number "10"; scaffold_18487 StringTie exon 1621 2261 1000 - . gene_id "MSTRG.35889"; transcript_id "MSTRG.35889.1"; exon_number "1"; scaffold_18487 StringTie exon 3897 3938 1000 - . gene_id "MSTRG.35889"; transcript_id "MSTRG.35889.1"; exon_number "2"; scaffold_18487 StringTie exon 7763 7868 1000 - . gene_id "MSTRG.35889"; transcript_id "MSTRG.35889.1"; exon_number "3"; scaffold_18487 StringTie exon 8080 8148 1000 - . gene_id "MSTRG.35889"; transcript_id "MSTRG.35889.1"; exon_number "4"; scaffold_18487 StringTie exon 8370 8382 1000 - . gene_id "MSTRG.35889"; transcript_id "MSTRG.35889.1"; exon_number "5"; scaffold_1849 StringTie exon 13159 13435 1000 . . gene_id "MSTRG.35894"; transcript_id "MSTRG.35894.1"; exon_number "1"; scaffold_1849 StringTie exon 75390 75591 1000 . . gene_id "MSTRG.35903"; transcript_id "MSTRG.35903.1"; exon_number "1"; scaffold_185 StringTie exon 67162 67546 1000 . . gene_id "MSTRG.35915"; transcript_id "MSTRG.35915.1"; exon_number "1"; scaffold_185 StringTie exon 92645 92945 1000 . . gene_id "MSTRG.35919"; transcript_id "MSTRG.35919.1"; exon_number "1"; scaffold_185 StringTie exon 181408 181818 1000 . . gene_id "MSTRG.35925"; transcript_id "MSTRG.35925.1"; exon_number "1"; scaffold_185 StringTie exon 258685 259158 1000 . . gene_id "MSTRG.35941"; transcript_id "MSTRG.35941.1"; exon_number "1"; scaffold_185 StringTie exon 630570 632512 1000 . . gene_id "MSTRG.35977"; transcript_id "MSTRG.35977.1"; exon_number "1"; scaffold_185 StringTie exon 780249 780468 1000 . . gene_id "MSTRG.35994"; transcript_id "MSTRG.35994.1"; exon_number "1"; scaffold_185 StringTie exon 911544 911817 1000 . . gene_id "MSTRG.35999"; transcript_id "MSTRG.35999.1"; exon_number "1"; scaffold_185 StringTie exon 996865 997183 1000 . . gene_id "MSTRG.36006"; transcript_id "MSTRG.36006.1"; exon_number "1"; scaffold_185 StringTie exon 1051642 1051730 1000 - . gene_id "MSTRG.36014"; transcript_id "MSTRG.36014.1"; exon_number "1"; scaffold_185 StringTie exon 1051851 1051932 1000 - . gene_id "MSTRG.36014"; transcript_id "MSTRG.36014.1"; exon_number "2"; scaffold_185 StringTie exon 1052118 1052222 1000 - . gene_id "MSTRG.36014"; transcript_id "MSTRG.36014.1"; exon_number "3"; scaffold_185 StringTie exon 1052368 1052468 1000 - . gene_id "MSTRG.36014"; transcript_id "MSTRG.36014.1"; exon_number "4"; scaffold_185 StringTie exon 1053984 1054127 1000 - . gene_id "MSTRG.36014"; transcript_id "MSTRG.36014.1"; exon_number "5"; scaffold_1851 StringTie exon 22431 22803 1000 . . gene_id "MSTRG.36048"; transcript_id "MSTRG.36048.1"; exon_number "1"; scaffold_1852 StringTie exon 131082 131378 1000 . . gene_id "MSTRG.36067"; transcript_id "MSTRG.36067.1"; exon_number "1"; scaffold_1853 StringTie exon 57027 57046 1000 - . gene_id "MSTRG.36082"; transcript_id "MSTRG.36082.1"; exon_number "1"; scaffold_1853 StringTie exon 60452 60590 1000 - . gene_id "MSTRG.36082"; transcript_id "MSTRG.36082.1"; exon_number "2"; scaffold_1853 StringTie exon 61299 61418 1000 - . gene_id "MSTRG.36082"; transcript_id "MSTRG.36082.1"; exon_number "3"; scaffold_1853 StringTie exon 61506 61655 1000 - . gene_id "MSTRG.36082"; transcript_id "MSTRG.36082.1"; exon_number "4"; scaffold_1853 StringTie exon 64807 65108 1000 . . gene_id "MSTRG.36083"; transcript_id "MSTRG.36083.1"; exon_number "1"; scaffold_18546 StringTie exon 8543 8800 1000 . . gene_id "MSTRG.36128"; transcript_id "MSTRG.36128.1"; exon_number "1"; scaffold_18562 StringTie exon 1412 1753 1000 . . gene_id "MSTRG.36151"; transcript_id "MSTRG.36151.1"; exon_number "1"; scaffold_18563 StringTie exon 5932 6232 1000 . . gene_id "MSTRG.36154"; transcript_id "MSTRG.36154.1"; exon_number "1"; scaffold_1857 StringTie exon 34168 34312 1000 + . gene_id "MSTRG.36160"; transcript_id "MSTRG.36160.1"; exon_number "1"; scaffold_1857 StringTie exon 35559 35657 1000 + . gene_id "MSTRG.36160"; transcript_id "MSTRG.36160.1"; exon_number "2"; scaffold_1857 StringTie exon 37174 37230 1000 + . gene_id "MSTRG.36160"; transcript_id "MSTRG.36160.1"; exon_number "3"; scaffold_18578 StringTie exon 90 463 1000 . . gene_id "MSTRG.36180"; transcript_id "MSTRG.36180.1"; exon_number "1"; scaffold_186 StringTie exon 180928 181338 1000 . . gene_id "MSTRG.36232"; transcript_id "MSTRG.36232.1"; exon_number "1"; scaffold_186 StringTie exon 234560 234905 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "1"; scaffold_186 StringTie exon 235045 235121 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "2"; scaffold_186 StringTie exon 235310 235414 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "3"; scaffold_186 StringTie exon 235551 235665 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "4"; scaffold_186 StringTie exon 235835 235916 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "5"; scaffold_186 StringTie exon 236048 236182 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "6"; scaffold_186 StringTie exon 236372 236522 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "7"; scaffold_186 StringTie exon 240488 240729 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "8"; scaffold_186 StringTie exon 243559 243826 1000 - . gene_id "MSTRG.36237"; transcript_id "MSTRG.36237.1"; exon_number "9"; scaffold_186 StringTie exon 303796 304266 1000 - . gene_id "MSTRG.36243"; transcript_id "MSTRG.36243.1"; exon_number "1"; scaffold_186 StringTie exon 334395 334594 1000 - . gene_id "MSTRG.36243"; transcript_id "MSTRG.36243.1"; exon_number "2"; scaffold_186 StringTie exon 584784 585138 1000 . . gene_id "MSTRG.36256"; transcript_id "MSTRG.36256.1"; exon_number "1"; scaffold_186 StringTie exon 788014 788285 1000 . . gene_id "MSTRG.36272"; transcript_id "MSTRG.36272.1"; exon_number "1"; scaffold_186 StringTie exon 1233927 1234127 1000 . . gene_id "MSTRG.36321"; transcript_id "MSTRG.36321.1"; exon_number "1"; scaffold_1860 StringTie exon 111981 112177 1000 + . gene_id "MSTRG.36335"; transcript_id "MSTRG.36335.1"; exon_number "1"; scaffold_1860 StringTie exon 114139 114185 1000 + . gene_id "MSTRG.36335"; transcript_id "MSTRG.36335.1"; exon_number "2"; scaffold_1860 StringTie exon 118879 118986 1000 + . gene_id "MSTRG.36335"; transcript_id "MSTRG.36335.1"; exon_number "3"; scaffold_1860 StringTie exon 123103 123291 1000 + . gene_id "MSTRG.36335"; transcript_id "MSTRG.36335.1"; exon_number "4"; scaffold_1860 StringTie exon 124632 124854 1000 + . gene_id "MSTRG.36335"; transcript_id "MSTRG.36335.1"; exon_number "5"; scaffold_1860 StringTie exon 129692 129790 1000 + . gene_id "MSTRG.36337"; transcript_id "MSTRG.36337.1"; exon_number "1"; scaffold_1860 StringTie exon 130112 130243 1000 + . gene_id "MSTRG.36337"; transcript_id "MSTRG.36337.1"; exon_number "2"; scaffold_1860 StringTie exon 131329 131350 1000 + . gene_id "MSTRG.36337"; transcript_id "MSTRG.36337.1"; exon_number "3"; scaffold_1860 StringTie exon 135002 135321 1000 . . gene_id "MSTRG.36340"; transcript_id "MSTRG.36340.1"; exon_number "1"; scaffold_1860 StringTie exon 152962 153176 1000 . . gene_id "MSTRG.36343"; transcript_id "MSTRG.36343.1"; exon_number "1"; scaffold_18604 StringTie exon 7377 7892 1000 . . gene_id "MSTRG.36346"; transcript_id "MSTRG.36346.1"; exon_number "1"; scaffold_1861 StringTie exon 13253 13520 1000 . . gene_id "MSTRG.36355"; transcript_id "MSTRG.36355.1"; exon_number "1"; scaffold_1863 StringTie exon 41198 41595 1000 . . gene_id "MSTRG.36402"; transcript_id "MSTRG.36402.1"; exon_number "1"; scaffold_1865 StringTie exon 97234 97639 1000 . . gene_id "MSTRG.36442"; transcript_id "MSTRG.36442.1"; exon_number "1"; scaffold_1865 StringTie exon 115520 115719 1000 . . gene_id "MSTRG.36444"; transcript_id "MSTRG.36444.1"; exon_number "1"; scaffold_1865 StringTie exon 134508 134903 1000 . . gene_id "MSTRG.36447"; transcript_id "MSTRG.36447.1"; exon_number "1"; scaffold_18652 StringTie exon 7310 7509 1000 . . gene_id "MSTRG.36454"; transcript_id "MSTRG.36454.1"; exon_number "1"; scaffold_1867 StringTie exon 82478 82925 1000 . . gene_id "MSTRG.36486"; transcript_id "MSTRG.36486.1"; exon_number "1"; scaffold_1869 StringTie exon 134986 135383 1000 . . gene_id "MSTRG.36520"; transcript_id "MSTRG.36520.1"; exon_number "1"; scaffold_187 StringTie exon 64570 64847 1000 . . gene_id "MSTRG.36532"; transcript_id "MSTRG.36532.1"; exon_number "1"; scaffold_187 StringTie exon 125226 125438 1000 . . gene_id "MSTRG.36534"; transcript_id "MSTRG.36534.1"; exon_number "1"; scaffold_187 StringTie exon 136810 137161 1000 + . gene_id "MSTRG.36535"; transcript_id "MSTRG.36535.1"; exon_number "1"; scaffold_187 StringTie exon 1295778 1296001 1000 . . gene_id "MSTRG.36583"; transcript_id "MSTRG.36583.1"; exon_number "1"; scaffold_18708 StringTie exon 129 561 1000 . . gene_id "MSTRG.36601"; transcript_id "MSTRG.36601.1"; exon_number "1"; scaffold_1871 StringTie exon 142902 143135 1000 . . gene_id "MSTRG.36609"; transcript_id "MSTRG.36609.1"; exon_number "1"; scaffold_18720 StringTie exon 2684 2929 1000 . . gene_id "MSTRG.36638"; transcript_id "MSTRG.36638.1"; exon_number "1"; scaffold_1873 StringTie exon 48736 48936 1000 . . gene_id "MSTRG.36646"; transcript_id "MSTRG.36646.1"; exon_number "1"; scaffold_1873 StringTie exon 122353 122574 1000 . . gene_id "MSTRG.36648"; transcript_id "MSTRG.36648.1"; exon_number "1"; scaffold_18735 StringTie exon 617 879 1000 . . gene_id "MSTRG.36655"; transcript_id "MSTRG.36655.1"; exon_number "1"; scaffold_1874 StringTie exon 41047 41648 1000 . . gene_id "MSTRG.36664"; transcript_id "MSTRG.36664.1"; exon_number "1"; scaffold_1875 StringTie exon 106121 106345 1000 . . gene_id "MSTRG.36691"; transcript_id "MSTRG.36691.1"; exon_number "1"; scaffold_1875 StringTie exon 150183 150412 1000 . . gene_id "MSTRG.36698"; transcript_id "MSTRG.36698.1"; exon_number "1"; scaffold_18756 StringTie exon 4113 4321 1000 . . gene_id "MSTRG.36706"; transcript_id "MSTRG.36706.1"; exon_number "1"; scaffold_1876 StringTie exon 111309 111341 1000 + . gene_id "MSTRG.36714"; transcript_id "MSTRG.36714.1"; exon_number "1"; scaffold_1876 StringTie exon 112443 112691 1000 + . gene_id "MSTRG.36714"; transcript_id "MSTRG.36714.1"; exon_number "2"; scaffold_18767 StringTie exon 4731 5033 1000 + . gene_id "MSTRG.36721"; transcript_id "MSTRG.36721.1"; exon_number "1"; scaffold_18767 StringTie exon 5428 5455 1000 + . gene_id "MSTRG.36721"; transcript_id "MSTRG.36721.1"; exon_number "2"; scaffold_18767 StringTie exon 5836 5850 1000 + . gene_id "MSTRG.36721"; transcript_id "MSTRG.36721.1"; exon_number "3"; scaffold_1877 StringTie exon 37896 38029 1000 - . gene_id "MSTRG.36731"; transcript_id "MSTRG.36731.2"; exon_number "1"; scaffold_1877 StringTie exon 38148 38250 1000 - . gene_id "MSTRG.36731"; transcript_id "MSTRG.36731.2"; exon_number "2"; scaffold_1877 StringTie exon 42635 42803 1000 - . gene_id "MSTRG.36731"; transcript_id "MSTRG.36731.2"; exon_number "3"; scaffold_1877 StringTie exon 60201 60416 1000 . . gene_id "MSTRG.36735"; transcript_id "MSTRG.36735.1"; exon_number "1"; scaffold_1877 StringTie exon 99533 99911 1000 . . gene_id "MSTRG.36738"; transcript_id "MSTRG.36738.1"; exon_number "1"; scaffold_18771 StringTie exon 4303 4586 1000 . . gene_id "MSTRG.36744"; transcript_id "MSTRG.36744.1"; exon_number "1"; scaffold_18786 StringTie exon 7937 8332 1000 . . gene_id "MSTRG.36776"; transcript_id "MSTRG.36776.1"; exon_number "1"; scaffold_1879 StringTie exon 121717 121826 1000 + . gene_id "MSTRG.36789"; transcript_id "MSTRG.36789.1"; exon_number "1"; scaffold_1879 StringTie exon 122038 122243 1000 + . gene_id "MSTRG.36789"; transcript_id "MSTRG.36789.1"; exon_number "2"; scaffold_188 StringTie exon 284290 284701 1000 . . gene_id "MSTRG.36808"; transcript_id "MSTRG.36808.1"; exon_number "1"; scaffold_188 StringTie exon 313024 313034 1000 - . gene_id "MSTRG.36811"; transcript_id "MSTRG.36811.1"; exon_number "1"; scaffold_188 StringTie exon 313769 313824 1000 - . gene_id "MSTRG.36811"; transcript_id "MSTRG.36811.1"; exon_number "2"; scaffold_188 StringTie exon 313921 313943 1000 - . gene_id "MSTRG.36811"; transcript_id "MSTRG.36811.1"; exon_number "3"; scaffold_188 StringTie exon 314180 314216 1000 - . gene_id "MSTRG.36811"; transcript_id "MSTRG.36811.1"; exon_number "4"; scaffold_188 StringTie exon 315614 315777 1000 - . gene_id "MSTRG.36811"; transcript_id "MSTRG.36811.1"; exon_number "5"; scaffold_188 StringTie exon 316698 316770 1000 - . gene_id "MSTRG.36811"; transcript_id "MSTRG.36811.1"; exon_number "6"; scaffold_188 StringTie exon 511470 511584 1000 + . gene_id "MSTRG.36827"; transcript_id "MSTRG.36827.1"; exon_number "1"; scaffold_188 StringTie exon 511888 512034 1000 + . gene_id "MSTRG.36827"; transcript_id "MSTRG.36827.1"; exon_number "2"; scaffold_188 StringTie exon 552980 553098 1000 + . gene_id "MSTRG.36831"; transcript_id "MSTRG.36831.1"; exon_number "1"; scaffold_188 StringTie exon 573576 573673 1000 + . gene_id "MSTRG.36831"; transcript_id "MSTRG.36831.1"; exon_number "2"; scaffold_188 StringTie exon 567492 567805 1000 . . gene_id "MSTRG.36833"; transcript_id "MSTRG.36833.1"; exon_number "1"; scaffold_188 StringTie exon 605139 605367 1000 . . gene_id "MSTRG.36835"; transcript_id "MSTRG.36835.1"; exon_number "1"; scaffold_188 StringTie exon 945787 946122 1000 . . gene_id "MSTRG.36853"; transcript_id "MSTRG.36853.1"; exon_number "1"; scaffold_188 StringTie exon 983458 984029 1000 + . gene_id "MSTRG.36856"; transcript_id "MSTRG.36856.1"; exon_number "1"; scaffold_188 StringTie exon 993118 993218 1000 + . gene_id "MSTRG.36856"; transcript_id "MSTRG.36856.1"; exon_number "2"; scaffold_188 StringTie exon 993321 993429 1000 + . gene_id "MSTRG.36856"; transcript_id "MSTRG.36856.1"; exon_number "3"; scaffold_188 StringTie exon 994118 994242 1000 + . gene_id "MSTRG.36856"; transcript_id "MSTRG.36856.1"; exon_number "4"; scaffold_188 StringTie exon 996224 997356 1000 + . gene_id "MSTRG.36856"; transcript_id "MSTRG.36856.1"; exon_number "5"; scaffold_1880 StringTie exon 36671 36874 1000 . . gene_id "MSTRG.36897"; transcript_id "MSTRG.36897.1"; exon_number "1"; scaffold_1881 StringTie exon 69302 71046 1000 . . gene_id "MSTRG.36926"; transcript_id "MSTRG.36926.1"; exon_number "1"; scaffold_18819 StringTie exon 1153 1384 1000 . . gene_id "MSTRG.36937"; transcript_id "MSTRG.36937.1"; exon_number "1"; scaffold_18824 StringTie exon 2658 2937 1000 . . gene_id "MSTRG.36948"; transcript_id "MSTRG.36948.1"; exon_number "1"; scaffold_18834 StringTie exon 6593 6828 1000 . . gene_id "MSTRG.36968"; transcript_id "MSTRG.36968.1"; exon_number "1"; scaffold_1884 StringTie exon 129557 129775 1000 . . gene_id "MSTRG.36975"; transcript_id "MSTRG.36975.1"; exon_number "1"; scaffold_1885 StringTie exon 6308 6584 1000 . . gene_id "MSTRG.36993"; transcript_id "MSTRG.36993.1"; exon_number "1"; scaffold_1885 StringTie exon 54192 54405 1000 + . gene_id "MSTRG.36998"; transcript_id "MSTRG.36998.1"; exon_number "1"; scaffold_1885 StringTie exon 55043 55057 1000 + . gene_id "MSTRG.36998"; transcript_id "MSTRG.36998.1"; exon_number "2"; scaffold_18851 StringTie exon 4830 5189 1000 . . gene_id "MSTRG.37002"; transcript_id "MSTRG.37002.1"; exon_number "1"; scaffold_18888 StringTie exon 1445 1853 1000 . . gene_id "MSTRG.37046"; transcript_id "MSTRG.37046.1"; exon_number "1"; scaffold_18893 StringTie exon 7175 7740 1000 . . gene_id "MSTRG.37064"; transcript_id "MSTRG.37064.1"; exon_number "1"; scaffold_189 StringTie exon 1693 2889 1000 . . gene_id "MSTRG.37067"; transcript_id "MSTRG.37067.1"; exon_number "1"; scaffold_189 StringTie exon 67049 67324 1000 . . gene_id "MSTRG.37076"; transcript_id "MSTRG.37076.1"; exon_number "1"; scaffold_189 StringTie exon 127624 127906 1000 . . gene_id "MSTRG.37079"; transcript_id "MSTRG.37079.1"; exon_number "1"; scaffold_189 StringTie exon 1059093 1059441 1000 . . gene_id "MSTRG.37150"; transcript_id "MSTRG.37150.1"; exon_number "1"; scaffold_18907 StringTie exon 994 1226 1000 . . gene_id "MSTRG.37176"; transcript_id "MSTRG.37176.1"; exon_number "1"; scaffold_1891 StringTie exon 8733 8965 1000 . . gene_id "MSTRG.37180"; transcript_id "MSTRG.37180.1"; exon_number "1"; scaffold_1891 StringTie exon 33760 34533 1000 . . gene_id "MSTRG.37182"; transcript_id "MSTRG.37182.1"; exon_number "1"; scaffold_1891 StringTie exon 69968 70201 1000 . . gene_id "MSTRG.37188"; transcript_id "MSTRG.37188.1"; exon_number "1"; scaffold_1891 StringTie exon 107184 107431 1000 . . gene_id "MSTRG.37192"; transcript_id "MSTRG.37192.1"; exon_number "1"; scaffold_18913 StringTie exon 19 290 1000 . . gene_id "MSTRG.37198"; transcript_id "MSTRG.37198.1"; exon_number "1"; scaffold_1893 StringTie exon 7932 8169 1000 . . gene_id "MSTRG.37221"; transcript_id "MSTRG.37221.1"; exon_number "1"; scaffold_1893 StringTie exon 58090 58295 1000 . . gene_id "MSTRG.37226"; transcript_id "MSTRG.37226.1"; exon_number "1"; scaffold_1893 StringTie exon 152842 153135 1000 + . gene_id "MSTRG.37235"; transcript_id "MSTRG.37235.1"; exon_number "1"; scaffold_1893 StringTie exon 155613 155701 1000 + . gene_id "MSTRG.37235"; transcript_id "MSTRG.37235.1"; exon_number "2"; scaffold_18936 StringTie exon 2513 3074 1000 . . gene_id "MSTRG.37240"; transcript_id "MSTRG.37240.1"; exon_number "1"; scaffold_1896 StringTie exon 78978 79233 1000 . . gene_id "MSTRG.37284"; transcript_id "MSTRG.37284.1"; exon_number "1"; scaffold_18964 StringTie exon 4889 5157 1000 . . gene_id "MSTRG.37291"; transcript_id "MSTRG.37291.1"; exon_number "1"; scaffold_18974 StringTie exon 7763 8007 1000 + . gene_id "MSTRG.37325"; transcript_id "MSTRG.37325.1"; exon_number "1"; scaffold_18974 StringTie exon 8341 8478 1000 + . gene_id "MSTRG.37325"; transcript_id "MSTRG.37325.1"; exon_number "2"; scaffold_18980 StringTie exon 4467 5343 1000 . . gene_id "MSTRG.37332"; transcript_id "MSTRG.37332.1"; exon_number "1"; scaffold_18986 StringTie exon 6911 7159 1000 . . gene_id "MSTRG.37340"; transcript_id "MSTRG.37340.1"; exon_number "1"; scaffold_1899 StringTie exon 102483 102749 1000 . . gene_id "MSTRG.37350"; transcript_id "MSTRG.37350.1"; exon_number "1"; scaffold_18995 StringTie exon 7407 7725 1000 . . gene_id "MSTRG.37356"; transcript_id "MSTRG.37356.1"; exon_number "1"; scaffold_190 StringTie exon 5257 5514 1000 . . gene_id "MSTRG.37392"; transcript_id "MSTRG.37392.1"; exon_number "1"; scaffold_190 StringTie exon 84860 85020 1000 + . gene_id "MSTRG.37398"; transcript_id "MSTRG.37398.1"; exon_number "1"; scaffold_190 StringTie exon 85459 85497 1000 + . gene_id "MSTRG.37398"; transcript_id "MSTRG.37398.1"; exon_number "2"; scaffold_190 StringTie exon 88483 88749 1000 . . gene_id "MSTRG.37400"; transcript_id "MSTRG.37400.1"; exon_number "1"; scaffold_190 StringTie exon 349770 350038 1000 . . gene_id "MSTRG.37424"; transcript_id "MSTRG.37424.1"; exon_number "1"; scaffold_190 StringTie exon 570397 570637 1000 . . gene_id "MSTRG.37431"; transcript_id "MSTRG.37431.1"; exon_number "1"; scaffold_190 StringTie exon 688613 690078 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "1"; scaffold_190 StringTie exon 690563 690642 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "2"; scaffold_190 StringTie exon 691229 691318 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "3"; scaffold_190 StringTie exon 692258 692395 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "4"; scaffold_190 StringTie exon 693339 693482 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "5"; scaffold_190 StringTie exon 694104 694213 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "6"; scaffold_190 StringTie exon 694717 694885 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "7"; scaffold_190 StringTie exon 695435 695574 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "8"; scaffold_190 StringTie exon 696150 696282 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "9"; scaffold_190 StringTie exon 696434 696485 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "10"; scaffold_190 StringTie exon 697799 697812 1000 - . gene_id "MSTRG.37437"; transcript_id "MSTRG.37437.1"; exon_number "11"; scaffold_190 StringTie exon 829938 830367 1000 - . gene_id "MSTRG.37450"; transcript_id "MSTRG.37450.1"; exon_number "1"; scaffold_190 StringTie exon 831621 831781 1000 - . gene_id "MSTRG.37450"; transcript_id "MSTRG.37450.1"; exon_number "2"; scaffold_190 StringTie exon 832003 832190 1000 - . gene_id "MSTRG.37450"; transcript_id "MSTRG.37450.1"; exon_number "3"; scaffold_190 StringTie exon 1141651 1142056 1000 + . gene_id "MSTRG.37488"; transcript_id "MSTRG.37488.1"; exon_number "1"; scaffold_190 StringTie exon 1145905 1145997 1000 + . gene_id "MSTRG.37488"; transcript_id "MSTRG.37488.1"; exon_number "2"; scaffold_190 StringTie exon 1148874 1149044 1000 + . gene_id "MSTRG.37488"; transcript_id "MSTRG.37488.1"; exon_number "3"; scaffold_190 StringTie exon 1149350 1149502 1000 + . gene_id "MSTRG.37488"; transcript_id "MSTRG.37488.1"; exon_number "4"; scaffold_190 StringTie exon 1149699 1149845 1000 + . gene_id "MSTRG.37488"; transcript_id "MSTRG.37488.1"; exon_number "5"; scaffold_190 StringTie exon 1150177 1150297 1000 + . gene_id "MSTRG.37488"; transcript_id "MSTRG.37488.1"; exon_number "6"; scaffold_190 StringTie exon 1179372 1179604 1000 . . gene_id "MSTRG.37493"; transcript_id "MSTRG.37493.1"; exon_number "1"; scaffold_1900 StringTie exon 28637 29192 1000 . . gene_id "MSTRG.37522"; transcript_id "MSTRG.37522.1"; exon_number "1"; scaffold_19002 StringTie exon 19 228 1000 . . gene_id "MSTRG.37532"; transcript_id "MSTRG.37532.1"; exon_number "1"; scaffold_1903 StringTie exon 15998 16197 1000 . . gene_id "MSTRG.37564"; transcript_id "MSTRG.37564.1"; exon_number "1"; scaffold_19031 StringTie exon 6711 6917 1000 . . gene_id "MSTRG.37572"; transcript_id "MSTRG.37572.1"; exon_number "1"; scaffold_1905 StringTie exon 71965 72311 1000 . . gene_id "MSTRG.37592"; transcript_id "MSTRG.37592.1"; exon_number "1"; scaffold_1906 StringTie exon 14069 14326 1000 . . gene_id "MSTRG.37608"; transcript_id "MSTRG.37608.1"; exon_number "1"; scaffold_1906 StringTie exon 78324 78574 1000 . . gene_id "MSTRG.37609"; transcript_id "MSTRG.37609.1"; exon_number "1"; scaffold_1906 StringTie exon 91238 91793 1000 . . gene_id "MSTRG.37613"; transcript_id "MSTRG.37613.1"; exon_number "1"; scaffold_1906 StringTie exon 101845 102093 1000 . . gene_id "MSTRG.37615"; transcript_id "MSTRG.37615.1"; exon_number "1"; scaffold_1907 StringTie exon 81249 82072 1000 - . gene_id "MSTRG.37633"; transcript_id "MSTRG.37633.1"; exon_number "1"; scaffold_1907 StringTie exon 82217 82339 1000 - . gene_id "MSTRG.37633"; transcript_id "MSTRG.37633.1"; exon_number "2"; scaffold_1907 StringTie exon 82479 82522 1000 - . gene_id "MSTRG.37633"; transcript_id "MSTRG.37633.1"; exon_number "3"; scaffold_1907 StringTie exon 82733 82865 1000 - . gene_id "MSTRG.37633"; transcript_id "MSTRG.37633.1"; exon_number "4"; scaffold_1907 StringTie exon 83936 83959 1000 - . gene_id "MSTRG.37633"; transcript_id "MSTRG.37633.1"; exon_number "5"; scaffold_1907 StringTie exon 84075 84091 1000 - . gene_id "MSTRG.37633"; transcript_id "MSTRG.37633.1"; exon_number "6"; scaffold_1907 StringTie exon 84189 84271 1000 - . gene_id "MSTRG.37634"; transcript_id "MSTRG.37634.2"; exon_number "1"; scaffold_1907 StringTie exon 84469 84894 1000 - . gene_id "MSTRG.37634"; transcript_id "MSTRG.37634.2"; exon_number "2"; scaffold_1907 StringTie exon 97837 98051 1000 - . gene_id "MSTRG.37634"; transcript_id "MSTRG.37634.2"; exon_number "3"; scaffold_19079 StringTie exon 16 201 1000 + . gene_id "MSTRG.37649"; transcript_id "MSTRG.37649.1"; exon_number "1"; scaffold_19079 StringTie exon 8307 8385 1000 + . gene_id "MSTRG.37649"; transcript_id "MSTRG.37649.1"; exon_number "2"; scaffold_191 StringTie exon 621143 621367 1000 . . gene_id "MSTRG.37711"; transcript_id "MSTRG.37711.1"; exon_number "1"; scaffold_191 StringTie exon 1134266 1134576 1000 . . gene_id "MSTRG.37738"; transcript_id "MSTRG.37738.1"; exon_number "1"; scaffold_1911 StringTie exon 32496 32721 1000 . . gene_id "MSTRG.37768"; transcript_id "MSTRG.37768.1"; exon_number "1"; scaffold_1912 StringTie exon 12424 12603 1000 - . gene_id "MSTRG.37790"; transcript_id "MSTRG.37790.1"; exon_number "1"; scaffold_1912 StringTie exon 12648 12811 1000 - . gene_id "MSTRG.37790"; transcript_id "MSTRG.37790.1"; exon_number "2"; scaffold_1912 StringTie exon 31022 31366 1000 . . gene_id "MSTRG.37794"; transcript_id "MSTRG.37794.1"; exon_number "1"; scaffold_19128 StringTie exon 6962 7235 1000 . . gene_id "MSTRG.37819"; transcript_id "MSTRG.37819.1"; exon_number "1"; scaffold_19129 StringTie exon 1082 1344 1000 . . gene_id "MSTRG.37820"; transcript_id "MSTRG.37820.1"; exon_number "1"; scaffold_1913 StringTie exon 112871 113113 1000 . . gene_id "MSTRG.37823"; transcript_id "MSTRG.37823.1"; exon_number "1"; scaffold_1915 StringTie exon 21570 21820 1000 . . gene_id "MSTRG.37860"; transcript_id "MSTRG.37860.1"; exon_number "1"; scaffold_1916 StringTie exon 14329 14763 1000 . . gene_id "MSTRG.37887"; transcript_id "MSTRG.37887.1"; exon_number "1"; scaffold_19178 StringTie exon 1392 1502 1000 + . gene_id "MSTRG.37929"; transcript_id "MSTRG.37929.1"; exon_number "1"; scaffold_19178 StringTie exon 5227 5351 1000 + . gene_id "MSTRG.37929"; transcript_id "MSTRG.37929.1"; exon_number "2"; scaffold_1918 StringTie exon 38818 39025 1000 . . gene_id "MSTRG.37932"; transcript_id "MSTRG.37932.1"; exon_number "1"; scaffold_1919 StringTie exon 41114 41375 1000 . . gene_id "MSTRG.37949"; transcript_id "MSTRG.37949.1"; exon_number "1"; scaffold_19190 StringTie exon 8058 8394 1000 . . gene_id "MSTRG.37954"; transcript_id "MSTRG.37954.1"; exon_number "1"; scaffold_19197 StringTie exon 15 1936 1000 . . gene_id "MSTRG.37959"; transcript_id "MSTRG.37959.1"; exon_number "1"; scaffold_192 StringTie exon 297617 298543 1000 . . gene_id "MSTRG.37984"; transcript_id "MSTRG.37984.1"; exon_number "1"; scaffold_192 StringTie exon 619313 621035 1000 . . gene_id "MSTRG.38005"; transcript_id "MSTRG.38005.1"; exon_number "1"; scaffold_192 StringTie exon 626893 630715 1000 - . gene_id "MSTRG.38006"; transcript_id "MSTRG.38006.1"; exon_number "1"; scaffold_192 StringTie exon 630806 630883 1000 - . gene_id "MSTRG.38006"; transcript_id "MSTRG.38006.1"; exon_number "2"; scaffold_192 StringTie exon 641192 641346 1000 - . gene_id "MSTRG.38006"; transcript_id "MSTRG.38006.1"; exon_number "3"; scaffold_192 StringTie exon 787223 787490 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "1"; scaffold_192 StringTie exon 788506 788579 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "2"; scaffold_192 StringTie exon 788873 788967 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "3"; scaffold_192 StringTie exon 789142 789273 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "4"; scaffold_192 StringTie exon 789380 789531 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "5"; scaffold_192 StringTie exon 789626 789739 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "6"; scaffold_192 StringTie exon 793919 794001 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "7"; scaffold_192 StringTie exon 794412 794552 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "8"; scaffold_192 StringTie exon 794822 795441 1000 + . gene_id "MSTRG.38020"; transcript_id "MSTRG.38020.2"; exon_number "9"; scaffold_192 StringTie exon 797790 798007 1000 . . gene_id "MSTRG.38022"; transcript_id "MSTRG.38022.1"; exon_number "1"; scaffold_192 StringTie exon 927719 927806 1000 + . gene_id "MSTRG.38035"; transcript_id "MSTRG.38035.1"; exon_number "1"; scaffold_192 StringTie exon 927977 928223 1000 + . gene_id "MSTRG.38035"; transcript_id "MSTRG.38035.1"; exon_number "2"; scaffold_192 StringTie exon 928617 928642 1000 + . gene_id "MSTRG.38035"; transcript_id "MSTRG.38035.1"; exon_number "3"; scaffold_192 StringTie exon 928750 928894 1000 + . gene_id "MSTRG.38035"; transcript_id "MSTRG.38035.1"; exon_number "4"; scaffold_192 StringTie exon 929221 929264 1000 + . gene_id "MSTRG.38035"; transcript_id "MSTRG.38035.1"; exon_number "5"; scaffold_192 StringTie exon 990926 991284 1000 + . gene_id "MSTRG.38047"; transcript_id "MSTRG.38047.1"; exon_number "1"; scaffold_19202 StringTie exon 2726 2872 1000 + . gene_id "MSTRG.38076"; transcript_id "MSTRG.38076.1"; exon_number "1"; scaffold_19202 StringTie exon 3339 3482 1000 + . gene_id "MSTRG.38076"; transcript_id "MSTRG.38076.1"; exon_number "2"; scaffold_19202 StringTie exon 3842 3942 1000 + . gene_id "MSTRG.38076"; transcript_id "MSTRG.38076.1"; exon_number "3"; scaffold_1922 StringTie exon 63418 65011 1000 . . gene_id "MSTRG.38112"; transcript_id "MSTRG.38112.1"; exon_number "1"; scaffold_1923 StringTie exon 109760 109966 1000 . . gene_id "MSTRG.38138"; transcript_id "MSTRG.38138.1"; exon_number "1"; scaffold_19248 StringTie exon 4025 4152 1000 - . gene_id "MSTRG.38170"; transcript_id "MSTRG.38170.1"; exon_number "1"; scaffold_19248 StringTie exon 4372 4516 1000 - . gene_id "MSTRG.38170"; transcript_id "MSTRG.38170.1"; exon_number "2"; scaffold_1925 StringTie exon 29743 29873 1000 - . gene_id "MSTRG.38180"; transcript_id "MSTRG.38180.1"; exon_number "1"; scaffold_1925 StringTie exon 30647 30780 1000 - . gene_id "MSTRG.38180"; transcript_id "MSTRG.38180.1"; exon_number "2"; scaffold_19259 StringTie exon 3282 4050 1000 . . gene_id "MSTRG.38209"; transcript_id "MSTRG.38209.1"; exon_number "1"; scaffold_19259 StringTie exon 7496 8147 1000 . . gene_id "MSTRG.38210"; transcript_id "MSTRG.38210.1"; exon_number "1"; scaffold_1926 StringTie exon 28493 28695 1000 . . gene_id "MSTRG.38213"; transcript_id "MSTRG.38213.1"; exon_number "1"; scaffold_1926 StringTie exon 42527 42739 1000 . . gene_id "MSTRG.38218"; transcript_id "MSTRG.38218.1"; exon_number "1"; scaffold_19269 StringTie exon 7729 7943 1000 . . gene_id "MSTRG.38235"; transcript_id "MSTRG.38235.1"; exon_number "1"; scaffold_1928 StringTie exon 88428 88633 1000 . . gene_id "MSTRG.38253"; transcript_id "MSTRG.38253.1"; exon_number "1"; scaffold_1928 StringTie exon 107824 108076 1000 . . gene_id "MSTRG.38254"; transcript_id "MSTRG.38254.1"; exon_number "1"; scaffold_1928 StringTie exon 127733 127958 1000 . . gene_id "MSTRG.38257"; transcript_id "MSTRG.38257.1"; exon_number "1"; scaffold_1929 StringTie exon 22550 22755 1000 . . gene_id "MSTRG.38269"; transcript_id "MSTRG.38269.1"; exon_number "1"; scaffold_193 StringTie exon 473620 474012 1000 . . gene_id "MSTRG.38297"; transcript_id "MSTRG.38297.1"; exon_number "1"; scaffold_193 StringTie exon 872915 873114 1000 + . gene_id "MSTRG.38322"; transcript_id "MSTRG.38322.1"; exon_number "1"; scaffold_193 StringTie exon 876301 876478 1000 + . gene_id "MSTRG.38322"; transcript_id "MSTRG.38322.1"; exon_number "2"; scaffold_193 StringTie exon 876589 876673 1000 + . gene_id "MSTRG.38322"; transcript_id "MSTRG.38322.1"; exon_number "3"; scaffold_193 StringTie exon 972059 972161 1000 + . gene_id "MSTRG.38328"; transcript_id "MSTRG.38328.1"; exon_number "1"; scaffold_193 StringTie exon 972387 972490 1000 + . gene_id "MSTRG.38328"; transcript_id "MSTRG.38328.1"; exon_number "2"; scaffold_193 StringTie exon 1109274 1109749 1000 . . gene_id "MSTRG.38342"; transcript_id "MSTRG.38342.1"; exon_number "1"; scaffold_1930 StringTie exon 114316 115054 1000 . . gene_id "MSTRG.38363"; transcript_id "MSTRG.38363.1"; exon_number "1"; scaffold_1931 StringTie exon 22260 23629 1000 - . gene_id "MSTRG.38378"; transcript_id "MSTRG.38378.1"; exon_number "1"; scaffold_1931 StringTie exon 38504 38520 1000 - . gene_id "MSTRG.38378"; transcript_id "MSTRG.38378.1"; exon_number "2"; scaffold_1931 StringTie exon 145591 145985 1000 - . gene_id "MSTRG.38399"; transcript_id "MSTRG.38399.1"; exon_number "1"; scaffold_1931 StringTie exon 146174 146289 1000 - . gene_id "MSTRG.38399"; transcript_id "MSTRG.38399.1"; exon_number "2"; scaffold_1931 StringTie exon 146643 146793 1000 - . gene_id "MSTRG.38399"; transcript_id "MSTRG.38399.1"; exon_number "3"; scaffold_1931 StringTie exon 146932 147070 1000 - . gene_id "MSTRG.38399"; transcript_id "MSTRG.38399.1"; exon_number "4"; scaffold_1931 StringTie exon 147342 147423 1000 - . gene_id "MSTRG.38399"; transcript_id "MSTRG.38399.1"; exon_number "5"; scaffold_19317 StringTie exon 7396 8054 1000 . . gene_id "MSTRG.38404"; transcript_id "MSTRG.38404.1"; exon_number "1"; scaffold_19322 StringTie exon 1888 2033 1000 + . gene_id "MSTRG.38414"; transcript_id "MSTRG.38414.1"; exon_number "1"; scaffold_19322 StringTie exon 4309 4371 1000 + . gene_id "MSTRG.38414"; transcript_id "MSTRG.38414.1"; exon_number "2"; scaffold_19322 StringTie exon 4517 4595 1000 + . gene_id "MSTRG.38414"; transcript_id "MSTRG.38414.1"; exon_number "3"; scaffold_19322 StringTie exon 5006 5156 1000 + . gene_id "MSTRG.38414"; transcript_id "MSTRG.38414.1"; exon_number "4"; scaffold_19322 StringTie exon 5417 5444 1000 + . gene_id "MSTRG.38414"; transcript_id "MSTRG.38414.1"; exon_number "5"; scaffold_19322 StringTie exon 5714 5789 1000 + . gene_id "MSTRG.38415"; transcript_id "MSTRG.38415.1"; exon_number "1"; scaffold_19322 StringTie exon 6558 7419 1000 + . gene_id "MSTRG.38415"; transcript_id "MSTRG.38415.1"; exon_number "2"; scaffold_1933 StringTie exon 69977 70941 1000 . . gene_id "MSTRG.38423"; transcript_id "MSTRG.38423.1"; exon_number "1"; scaffold_1934 StringTie exon 86582 88401 1000 . . gene_id "MSTRG.38433"; transcript_id "MSTRG.38433.1"; exon_number "1"; scaffold_1935 StringTie exon 96133 96382 1000 - . gene_id "MSTRG.38469"; transcript_id "MSTRG.38469.1"; exon_number "1"; scaffold_1935 StringTie exon 96746 96780 1000 - . gene_id "MSTRG.38469"; transcript_id "MSTRG.38469.1"; exon_number "2"; scaffold_1935 StringTie exon 125422 125830 1000 . . gene_id "MSTRG.38476"; transcript_id "MSTRG.38476.1"; exon_number "1"; scaffold_1936 StringTie exon 1401 1604 1000 . . gene_id "MSTRG.38485"; transcript_id "MSTRG.38485.1"; exon_number "1"; scaffold_1937 StringTie exon 49022 49066 1000 + . gene_id "MSTRG.38501"; transcript_id "MSTRG.38501.1"; exon_number "1"; scaffold_1937 StringTie exon 49202 49270 1000 + . gene_id "MSTRG.38501"; transcript_id "MSTRG.38501.1"; exon_number "2"; scaffold_1937 StringTie exon 49394 49471 1000 + . gene_id "MSTRG.38501"; transcript_id "MSTRG.38501.1"; exon_number "3"; scaffold_1937 StringTie exon 50219 50420 1000 + . gene_id "MSTRG.38501"; transcript_id "MSTRG.38501.1"; exon_number "4"; scaffold_1937 StringTie exon 53904 54038 1000 + . gene_id "MSTRG.38501"; transcript_id "MSTRG.38501.1"; exon_number "5"; scaffold_1937 StringTie exon 68373 68630 1000 . . gene_id "MSTRG.38505"; transcript_id "MSTRG.38505.1"; exon_number "1"; scaffold_19384 StringTie exon 2559 2785 1000 . . gene_id "MSTRG.38527"; transcript_id "MSTRG.38527.1"; exon_number "1"; scaffold_1939 StringTie exon 20374 20587 1000 . . gene_id "MSTRG.38534"; transcript_id "MSTRG.38534.1"; exon_number "1"; scaffold_1939 StringTie exon 29844 29956 1000 - . gene_id "MSTRG.38537"; transcript_id "MSTRG.38537.1"; exon_number "1"; scaffold_1939 StringTie exon 30056 30225 1000 - . gene_id "MSTRG.38537"; transcript_id "MSTRG.38537.1"; exon_number "2"; scaffold_1939 StringTie exon 30469 30664 1000 - . gene_id "MSTRG.38537"; transcript_id "MSTRG.38537.1"; exon_number "3"; scaffold_1939 StringTie exon 30940 31108 1000 - . gene_id "MSTRG.38537"; transcript_id "MSTRG.38537.1"; exon_number "4"; scaffold_1939 StringTie exon 31205 31309 1000 - . gene_id "MSTRG.38537"; transcript_id "MSTRG.38537.1"; exon_number "5"; scaffold_1939 StringTie exon 31555 31564 1000 - . gene_id "MSTRG.38537"; transcript_id "MSTRG.38537.1"; exon_number "6"; scaffold_1939 StringTie exon 92836 93168 1000 - . gene_id "MSTRG.38545"; transcript_id "MSTRG.38545.1"; exon_number "1"; scaffold_1939 StringTie exon 93300 93396 1000 - . gene_id "MSTRG.38545"; transcript_id "MSTRG.38545.1"; exon_number "2"; scaffold_19392 StringTie exon 8005 8347 1000 . . gene_id "MSTRG.38564"; transcript_id "MSTRG.38564.1"; exon_number "1"; scaffold_194 StringTie exon 110795 111059 1000 . . gene_id "MSTRG.38578"; transcript_id "MSTRG.38578.1"; exon_number "1"; scaffold_194 StringTie exon 181845 182206 1000 . . gene_id "MSTRG.38585"; transcript_id "MSTRG.38585.1"; exon_number "1"; scaffold_194 StringTie exon 562794 563020 1000 . . gene_id "MSTRG.38611"; transcript_id "MSTRG.38611.1"; exon_number "1"; scaffold_194 StringTie exon 674678 675418 1000 . . gene_id "MSTRG.38620"; transcript_id "MSTRG.38620.1"; exon_number "1"; scaffold_194 StringTie exon 679866 680250 1000 . . gene_id "MSTRG.38623"; transcript_id "MSTRG.38623.1"; exon_number "1"; scaffold_1942 StringTie exon 64619 64887 1000 . . gene_id "MSTRG.38718"; transcript_id "MSTRG.38718.1"; exon_number "1"; scaffold_1943 StringTie exon 112103 113182 1000 . . gene_id "MSTRG.38746"; transcript_id "MSTRG.38746.1"; exon_number "1"; scaffold_1944 StringTie exon 72586 72824 1000 . . gene_id "MSTRG.38754"; transcript_id "MSTRG.38754.1"; exon_number "1"; scaffold_19440 StringTie exon 4173 4388 1000 . . gene_id "MSTRG.38762"; transcript_id "MSTRG.38762.1"; exon_number "1"; scaffold_1947 StringTie exon 33933 34193 1000 . . gene_id "MSTRG.38804"; transcript_id "MSTRG.38804.1"; exon_number "1"; scaffold_1947 StringTie exon 118722 119067 1000 . . gene_id "MSTRG.38808"; transcript_id "MSTRG.38808.1"; exon_number "1"; scaffold_1948 StringTie exon 37293 37492 1000 . . gene_id "MSTRG.38820"; transcript_id "MSTRG.38820.1"; exon_number "1"; scaffold_1948 StringTie exon 65740 66049 1000 - . gene_id "MSTRG.38821"; transcript_id "MSTRG.38821.1"; exon_number "1"; scaffold_1948 StringTie exon 94626 94746 1000 - . gene_id "MSTRG.38828"; transcript_id "MSTRG.38828.1"; exon_number "1"; scaffold_1948 StringTie exon 95815 95946 1000 - . gene_id "MSTRG.38828"; transcript_id "MSTRG.38828.1"; exon_number "2"; scaffold_1949 StringTie exon 73747 73903 1000 + . gene_id "MSTRG.38841"; transcript_id "MSTRG.38841.1"; exon_number "1"; scaffold_1949 StringTie exon 75344 75431 1000 + . gene_id "MSTRG.38841"; transcript_id "MSTRG.38841.1"; exon_number "2"; scaffold_1949 StringTie exon 75595 75705 1000 + . gene_id "MSTRG.38841"; transcript_id "MSTRG.38841.1"; exon_number "3"; scaffold_1949 StringTie exon 76066 76239 1000 + . gene_id "MSTRG.38841"; transcript_id "MSTRG.38841.1"; exon_number "4"; scaffold_1949 StringTie exon 76506 76650 1000 + . gene_id "MSTRG.38841"; transcript_id "MSTRG.38841.1"; exon_number "5"; scaffold_1949 StringTie exon 78826 79533 1000 + . gene_id "MSTRG.38841"; transcript_id "MSTRG.38841.1"; exon_number "6"; scaffold_1949 StringTie exon 132694 132704 1000 + . gene_id "MSTRG.38841"; transcript_id "MSTRG.38841.1"; exon_number "7"; scaffold_1949 StringTie exon 76764 76908 1000 + . gene_id "MSTRG.38842"; transcript_id "MSTRG.38842.1"; exon_number "1"; scaffold_1949 StringTie exon 76967 77026 1000 + . gene_id "MSTRG.38842"; transcript_id "MSTRG.38842.1"; exon_number "2"; scaffold_195 StringTie exon 20154 20232 1000 + . gene_id "MSTRG.38854"; transcript_id "MSTRG.38854.1"; exon_number "1"; scaffold_195 StringTie exon 21452 21542 1000 + . gene_id "MSTRG.38854"; transcript_id "MSTRG.38854.1"; exon_number "2"; scaffold_195 StringTie exon 22294 22376 1000 + . gene_id "MSTRG.38854"; transcript_id "MSTRG.38854.1"; exon_number "3"; scaffold_195 StringTie exon 263154 263394 1000 . . gene_id "MSTRG.38876"; transcript_id "MSTRG.38876.1"; exon_number "1"; scaffold_195 StringTie exon 410815 411043 1000 . . gene_id "MSTRG.38888"; transcript_id "MSTRG.38888.1"; exon_number "1"; scaffold_195 StringTie exon 538458 538732 1000 . . gene_id "MSTRG.38890"; transcript_id "MSTRG.38890.1"; exon_number "1"; scaffold_195 StringTie exon 773318 773572 1000 . . gene_id "MSTRG.38895"; transcript_id "MSTRG.38895.1"; exon_number "1"; scaffold_195 StringTie exon 1148415 1148774 1000 . . gene_id "MSTRG.38916"; transcript_id "MSTRG.38916.1"; exon_number "1"; scaffold_195 StringTie exon 1193956 1194233 1000 . . gene_id "MSTRG.38918"; transcript_id "MSTRG.38918.1"; exon_number "1"; scaffold_1950 StringTie exon 6198 6433 1000 . . gene_id "MSTRG.38929"; transcript_id "MSTRG.38929.1"; exon_number "1"; scaffold_1951 StringTie exon 72834 73126 1000 . . gene_id "MSTRG.38969"; transcript_id "MSTRG.38969.1"; exon_number "1"; scaffold_1951 StringTie exon 132946 133002 1000 + . gene_id "MSTRG.38974"; transcript_id "MSTRG.38974.1"; exon_number "1"; scaffold_1951 StringTie exon 136354 136513 1000 + . gene_id "MSTRG.38974"; transcript_id "MSTRG.38974.1"; exon_number "2"; scaffold_1951 StringTie exon 136853 136971 1000 + . gene_id "MSTRG.38974"; transcript_id "MSTRG.38974.1"; exon_number "3"; scaffold_1951 StringTie exon 137061 137277 1000 + . gene_id "MSTRG.38974"; transcript_id "MSTRG.38974.1"; exon_number "4"; scaffold_1951 StringTie exon 137422 137481 1000 + . gene_id "MSTRG.38974"; transcript_id "MSTRG.38974.1"; exon_number "5"; scaffold_1951 StringTie exon 137659 137702 1000 + . gene_id "MSTRG.38974"; transcript_id "MSTRG.38974.1"; exon_number "6"; scaffold_1951 StringTie exon 137820 137903 1000 + . gene_id "MSTRG.38974"; transcript_id "MSTRG.38974.1"; exon_number "7"; scaffold_1951 StringTie exon 138123 138161 1000 + . gene_id "MSTRG.38974"; transcript_id "MSTRG.38974.1"; exon_number "8"; scaffold_19510 StringTie exon 517 1252 1000 . . gene_id "MSTRG.38978"; transcript_id "MSTRG.38978.1"; exon_number "1"; scaffold_1952 StringTie exon 27662 27746 1000 - . gene_id "MSTRG.38982"; transcript_id "MSTRG.38982.1"; exon_number "1"; scaffold_1952 StringTie exon 28394 28475 1000 - . gene_id "MSTRG.38982"; transcript_id "MSTRG.38982.1"; exon_number "2"; scaffold_1952 StringTie exon 28795 28835 1000 - . gene_id "MSTRG.38982"; transcript_id "MSTRG.38982.1"; exon_number "3"; scaffold_1952 StringTie exon 29148 29314 1000 - . gene_id "MSTRG.38982"; transcript_id "MSTRG.38982.1"; exon_number "4"; scaffold_19534 StringTie exon 1826 2216 1000 . . gene_id "MSTRG.39019"; transcript_id "MSTRG.39019.1"; exon_number "1"; scaffold_1955 StringTie exon 27496 27707 1000 + . gene_id "MSTRG.39035"; transcript_id "MSTRG.39035.1"; exon_number "1"; scaffold_1955 StringTie exon 27967 28062 1000 + . gene_id "MSTRG.39035"; transcript_id "MSTRG.39035.1"; exon_number "2"; scaffold_19568 StringTie exon 1763 1849 1000 + . gene_id "MSTRG.39060"; transcript_id "MSTRG.39060.1"; exon_number "1"; scaffold_19568 StringTie exon 2800 2951 1000 + . gene_id "MSTRG.39060"; transcript_id "MSTRG.39060.1"; exon_number "2"; scaffold_19568 StringTie exon 3688 3706 1000 + . gene_id "MSTRG.39060"; transcript_id "MSTRG.39060.1"; exon_number "3"; scaffold_1958 StringTie exon 11579 12480 1000 - . gene_id "MSTRG.39084"; transcript_id "MSTRG.39084.1"; exon_number "1"; scaffold_1958 StringTie exon 14641 14770 1000 - . gene_id "MSTRG.39084"; transcript_id "MSTRG.39084.1"; exon_number "2"; scaffold_1958 StringTie exon 16090 16165 1000 - . gene_id "MSTRG.39084"; transcript_id "MSTRG.39084.1"; exon_number "3"; scaffold_1958 StringTie exon 16548 16643 1000 - . gene_id "MSTRG.39084"; transcript_id "MSTRG.39084.1"; exon_number "4"; scaffold_1958 StringTie exon 17915 18196 1000 - . gene_id "MSTRG.39084"; transcript_id "MSTRG.39084.1"; exon_number "5"; scaffold_1958 StringTie exon 18299 18417 1000 - . gene_id "MSTRG.39084"; transcript_id "MSTRG.39084.1"; exon_number "6"; scaffold_1958 StringTie exon 20877 21021 1000 - . gene_id "MSTRG.39086"; transcript_id "MSTRG.39086.1"; exon_number "1"; scaffold_1958 StringTie exon 21207 21302 1000 - . gene_id "MSTRG.39086"; transcript_id "MSTRG.39086.1"; exon_number "2"; scaffold_1958 StringTie exon 21461 21594 1000 - . gene_id "MSTRG.39086"; transcript_id "MSTRG.39086.1"; exon_number "3"; scaffold_19580 StringTie exon 767 996 1000 . . gene_id "MSTRG.39100"; transcript_id "MSTRG.39100.1"; exon_number "1"; scaffold_1959 StringTie exon 40568 40860 1000 . . gene_id "MSTRG.39109"; transcript_id "MSTRG.39109.1"; exon_number "1"; scaffold_196 StringTie exon 1614 1776 1000 + . gene_id "MSTRG.39125"; transcript_id "MSTRG.39125.1"; exon_number "1"; scaffold_196 StringTie exon 2187 2753 1000 + . gene_id "MSTRG.39125"; transcript_id "MSTRG.39125.1"; exon_number "2"; scaffold_196 StringTie exon 2970 3098 1000 + . gene_id "MSTRG.39125"; transcript_id "MSTRG.39125.1"; exon_number "3"; scaffold_196 StringTie exon 3289 3464 1000 + . gene_id "MSTRG.39125"; transcript_id "MSTRG.39125.1"; exon_number "4"; scaffold_196 StringTie exon 36763 36784 1000 - . gene_id "MSTRG.39131"; transcript_id "MSTRG.39131.1"; exon_number "1"; scaffold_196 StringTie exon 37439 37500 1000 - . gene_id "MSTRG.39131"; transcript_id "MSTRG.39131.1"; exon_number "2"; scaffold_196 StringTie exon 37624 37893 1000 - . gene_id "MSTRG.39131"; transcript_id "MSTRG.39131.1"; exon_number "3"; scaffold_196 StringTie exon 287620 287934 1000 + . gene_id "MSTRG.39153"; transcript_id "MSTRG.39153.1"; exon_number "1"; scaffold_196 StringTie exon 288467 288502 1000 + . gene_id "MSTRG.39153"; transcript_id "MSTRG.39153.1"; exon_number "2"; scaffold_196 StringTie exon 361495 362138 1000 . . gene_id "MSTRG.39162"; transcript_id "MSTRG.39162.1"; exon_number "1"; scaffold_196 StringTie exon 626392 626520 1000 - . gene_id "MSTRG.39185"; transcript_id "MSTRG.39185.1"; exon_number "1"; scaffold_196 StringTie exon 627835 627974 1000 - . gene_id "MSTRG.39185"; transcript_id "MSTRG.39185.1"; exon_number "2"; scaffold_196 StringTie exon 628812 629048 1000 - . gene_id "MSTRG.39185"; transcript_id "MSTRG.39185.1"; exon_number "3"; scaffold_196 StringTie exon 630162 630257 1000 + . gene_id "MSTRG.39187"; transcript_id "MSTRG.39187.1"; exon_number "1"; scaffold_196 StringTie exon 630410 630548 1000 + . gene_id "MSTRG.39187"; transcript_id "MSTRG.39187.1"; exon_number "2"; scaffold_196 StringTie exon 632802 632897 1000 + . gene_id "MSTRG.39187"; transcript_id "MSTRG.39187.1"; exon_number "3"; scaffold_196 StringTie exon 635338 635441 1000 + . gene_id "MSTRG.39188"; transcript_id "MSTRG.39188.1"; exon_number "1"; scaffold_196 StringTie exon 636257 636366 1000 + . gene_id "MSTRG.39188"; transcript_id "MSTRG.39188.1"; exon_number "2"; scaffold_196 StringTie exon 636660 636791 1000 + . gene_id "MSTRG.39188"; transcript_id "MSTRG.39188.1"; exon_number "3"; scaffold_196 StringTie exon 939389 939617 1000 . . gene_id "MSTRG.39210"; transcript_id "MSTRG.39210.1"; exon_number "1"; scaffold_196 StringTie exon 956852 957071 1000 . . gene_id "MSTRG.39213"; transcript_id "MSTRG.39213.1"; exon_number "1"; scaffold_196 StringTie exon 1124431 1125040 1000 - . gene_id "MSTRG.39222"; transcript_id "MSTRG.39222.2"; exon_number "1"; scaffold_196 StringTie exon 1125442 1125625 1000 - . gene_id "MSTRG.39222"; transcript_id "MSTRG.39222.2"; exon_number "2"; scaffold_196 StringTie exon 1126997 1127099 1000 - . gene_id "MSTRG.39222"; transcript_id "MSTRG.39222.2"; exon_number "3"; scaffold_196 StringTie exon 1130968 1131134 1000 - . gene_id "MSTRG.39222"; transcript_id "MSTRG.39222.2"; exon_number "4"; scaffold_196 StringTie exon 1132981 1133103 1000 - . gene_id "MSTRG.39222"; transcript_id "MSTRG.39222.2"; exon_number "5"; scaffold_196 StringTie exon 1134348 1134528 1000 - . gene_id "MSTRG.39222"; transcript_id "MSTRG.39222.2"; exon_number "6"; scaffold_1960 StringTie exon 61018 61219 1000 . . gene_id "MSTRG.39229"; transcript_id "MSTRG.39229.1"; exon_number "1"; scaffold_19607 StringTie exon 788 2082 1000 . . gene_id "MSTRG.39240"; transcript_id "MSTRG.39240.1"; exon_number "1"; scaffold_19609 StringTie exon 5919 6626 1000 - . gene_id "MSTRG.39241"; transcript_id "MSTRG.39241.1"; exon_number "1"; scaffold_1961 StringTie exon 37877 38111 1000 . . gene_id "MSTRG.39244"; transcript_id "MSTRG.39244.1"; exon_number "1"; scaffold_19621 StringTie exon 7882 8142 1000 . . gene_id "MSTRG.39278"; transcript_id "MSTRG.39278.1"; exon_number "1"; scaffold_19623 StringTie exon 6257 6456 1000 . . gene_id "MSTRG.39280"; transcript_id "MSTRG.39280.1"; exon_number "1"; scaffold_19628 StringTie exon 298 910 1000 . . gene_id "MSTRG.39284"; transcript_id "MSTRG.39284.1"; exon_number "1"; scaffold_1964 StringTie exon 31961 32229 1000 . . gene_id "MSTRG.39318"; transcript_id "MSTRG.39318.1"; exon_number "1"; scaffold_1964 StringTie exon 70778 71224 1000 . . gene_id "MSTRG.39321"; transcript_id "MSTRG.39321.1"; exon_number "1"; scaffold_1964 StringTie exon 91237 91752 1000 . . gene_id "MSTRG.39324"; transcript_id "MSTRG.39324.1"; exon_number "1"; scaffold_1965 StringTie exon 106025 106272 1000 . . gene_id "MSTRG.39333"; transcript_id "MSTRG.39333.1"; exon_number "1"; scaffold_19653 StringTie exon 7175 7440 1000 . . gene_id "MSTRG.39340"; transcript_id "MSTRG.39340.1"; exon_number "1"; scaffold_1967 StringTie exon 118092 118460 1000 . . gene_id "MSTRG.39368"; transcript_id "MSTRG.39368.1"; exon_number "1"; scaffold_19670 StringTie exon 2103 2601 1000 . . gene_id "MSTRG.39371"; transcript_id "MSTRG.39371.1"; exon_number "1"; scaffold_19674 StringTie exon 7974 8201 1000 . . gene_id "MSTRG.39377"; transcript_id "MSTRG.39377.1"; exon_number "1"; scaffold_197 StringTie exon 367602 367830 1000 . . gene_id "MSTRG.39438"; transcript_id "MSTRG.39438.1"; exon_number "1"; scaffold_197 StringTie exon 522277 522513 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "1"; scaffold_197 StringTie exon 522865 523016 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "2"; scaffold_197 StringTie exon 523743 523924 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "3"; scaffold_197 StringTie exon 524462 524615 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "4"; scaffold_197 StringTie exon 526945 527126 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "5"; scaffold_197 StringTie exon 529504 529631 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "6"; scaffold_197 StringTie exon 531093 531242 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "7"; scaffold_197 StringTie exon 532110 532285 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "8"; scaffold_197 StringTie exon 532467 532590 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "9"; scaffold_197 StringTie exon 533461 533752 1000 - . gene_id "MSTRG.39448"; transcript_id "MSTRG.39448.1"; exon_number "10"; scaffold_197 StringTie exon 609370 609610 1000 . . gene_id "MSTRG.39455"; transcript_id "MSTRG.39455.1"; exon_number "1"; scaffold_19712 StringTie exon 3183 3571 1000 . . gene_id "MSTRG.39531"; transcript_id "MSTRG.39531.1"; exon_number "1"; scaffold_19722 StringTie exon 817 1086 1000 . . gene_id "MSTRG.39556"; transcript_id "MSTRG.39556.1"; exon_number "1"; scaffold_1973 StringTie exon 35320 35557 1000 . . gene_id "MSTRG.39561"; transcript_id "MSTRG.39561.1"; exon_number "1"; scaffold_1973 StringTie exon 89895 90531 1000 + . gene_id "MSTRG.39569"; transcript_id "MSTRG.39569.1"; exon_number "1"; scaffold_1973 StringTie exon 90558 90772 1000 + . gene_id "MSTRG.39569"; transcript_id "MSTRG.39569.1"; exon_number "2"; scaffold_19767 StringTie exon 1106 1351 1000 . . gene_id "MSTRG.39617"; transcript_id "MSTRG.39617.1"; exon_number "1"; scaffold_1977 StringTie exon 22861 23070 1000 . . gene_id "MSTRG.39621"; transcript_id "MSTRG.39621.1"; exon_number "1"; scaffold_198 StringTie exon 2703 3359 1000 . . gene_id "MSTRG.39684"; transcript_id "MSTRG.39684.1"; exon_number "1"; scaffold_198 StringTie exon 200111 200393 1000 . . gene_id "MSTRG.39700"; transcript_id "MSTRG.39700.1"; exon_number "1"; scaffold_198 StringTie exon 609347 609630 1000 . . gene_id "MSTRG.39717"; transcript_id "MSTRG.39717.1"; exon_number "1"; scaffold_198 StringTie exon 942141 942449 1000 . . gene_id "MSTRG.39734"; transcript_id "MSTRG.39734.1"; exon_number "1"; scaffold_198 StringTie exon 973018 973173 1000 + . gene_id "MSTRG.39737"; transcript_id "MSTRG.39737.1"; exon_number "1"; scaffold_198 StringTie exon 973363 973486 1000 + . gene_id "MSTRG.39737"; transcript_id "MSTRG.39737.1"; exon_number "2"; scaffold_198 StringTie exon 974351 974532 1000 + . gene_id "MSTRG.39737"; transcript_id "MSTRG.39737.1"; exon_number "3"; scaffold_198 StringTie exon 1031143 1031317 1000 - . gene_id "MSTRG.39745"; transcript_id "MSTRG.39745.1"; exon_number "1"; scaffold_198 StringTie exon 1031815 1031965 1000 - . gene_id "MSTRG.39745"; transcript_id "MSTRG.39745.1"; exon_number "2"; scaffold_198 StringTie exon 1032114 1032262 1000 - . gene_id "MSTRG.39745"; transcript_id "MSTRG.39745.1"; exon_number "3"; scaffold_198 StringTie exon 1033170 1033294 1000 - . gene_id "MSTRG.39745"; transcript_id "MSTRG.39745.1"; exon_number "4"; scaffold_198 StringTie exon 1286990 1288766 1000 . . gene_id "MSTRG.39760"; transcript_id "MSTRG.39760.1"; exon_number "1"; scaffold_1980 StringTie exon 116361 116598 1000 . . gene_id "MSTRG.39765"; transcript_id "MSTRG.39765.1"; exon_number "1"; scaffold_19826 StringTie exon 475 604 1000 + . gene_id "MSTRG.39797"; transcript_id "MSTRG.39797.1"; exon_number "1"; scaffold_19826 StringTie exon 931 2050 1000 + . gene_id "MSTRG.39797"; transcript_id "MSTRG.39797.1"; exon_number "2"; scaffold_19826 StringTie exon 6344 6700 1000 + . gene_id "MSTRG.39799"; transcript_id "MSTRG.39799.1"; exon_number "1"; scaffold_19826 StringTie exon 7075 7245 1000 + . gene_id "MSTRG.39799"; transcript_id "MSTRG.39799.1"; exon_number "2"; scaffold_19829 StringTie exon 4231 4505 1000 . . gene_id "MSTRG.39801"; transcript_id "MSTRG.39801.1"; exon_number "1"; scaffold_1983 StringTie exon 45628 46334 1000 . . gene_id "MSTRG.39806"; transcript_id "MSTRG.39806.1"; exon_number "1"; scaffold_1983 StringTie exon 83729 84021 1000 . . gene_id "MSTRG.39810"; transcript_id "MSTRG.39810.1"; exon_number "1"; scaffold_1983 StringTie exon 103535 103810 1000 . . gene_id "MSTRG.39812"; transcript_id "MSTRG.39812.1"; exon_number "1"; scaffold_1983 StringTie exon 117334 117663 1000 . . gene_id "MSTRG.39815"; transcript_id "MSTRG.39815.1"; exon_number "1"; scaffold_1983 StringTie exon 132184 132492 1000 . . gene_id "MSTRG.39818"; transcript_id "MSTRG.39818.1"; exon_number "1"; scaffold_19832 StringTie exon 3678 4026 1000 . . gene_id "MSTRG.39819"; transcript_id "MSTRG.39819.1"; exon_number "1"; scaffold_19841 StringTie exon 7300 7681 1000 . . gene_id "MSTRG.39831"; transcript_id "MSTRG.39831.1"; exon_number "1"; scaffold_1985 StringTie exon 21100 21310 1000 . . gene_id "MSTRG.39838"; transcript_id "MSTRG.39838.1"; exon_number "1"; scaffold_1985 StringTie exon 132408 132504 1000 - . gene_id "MSTRG.39842"; transcript_id "MSTRG.39842.1"; exon_number "1"; scaffold_1985 StringTie exon 132612 132824 1000 - . gene_id "MSTRG.39842"; transcript_id "MSTRG.39842.1"; exon_number "2"; scaffold_1985 StringTie exon 133212 133300 1000 - . gene_id "MSTRG.39842"; transcript_id "MSTRG.39842.1"; exon_number "3"; scaffold_19858 StringTie exon 44 110 1000 + . gene_id "MSTRG.39848"; transcript_id "MSTRG.39848.1"; exon_number "1"; scaffold_19858 StringTie exon 420 526 1000 + . gene_id "MSTRG.39848"; transcript_id "MSTRG.39848.1"; exon_number "2"; scaffold_19858 StringTie exon 831 985 1000 + . gene_id "MSTRG.39848"; transcript_id "MSTRG.39848.1"; exon_number "3"; scaffold_19879 StringTie exon 7110 7395 1000 . . gene_id "MSTRG.39869"; transcript_id "MSTRG.39869.1"; exon_number "1"; scaffold_1988 StringTie exon 49730 49995 1000 . . gene_id "MSTRG.39876"; transcript_id "MSTRG.39876.1"; exon_number "1"; scaffold_1988 StringTie exon 83084 83313 1000 . . gene_id "MSTRG.39878"; transcript_id "MSTRG.39878.1"; exon_number "1"; scaffold_19887 StringTie exon 2787 2993 1000 . . gene_id "MSTRG.39889"; transcript_id "MSTRG.39889.1"; exon_number "1"; scaffold_1989 StringTie exon 20555 20698 1000 - . gene_id "MSTRG.39895"; transcript_id "MSTRG.39895.1"; exon_number "1"; scaffold_1989 StringTie exon 20891 21012 1000 - . gene_id "MSTRG.39895"; transcript_id "MSTRG.39895.1"; exon_number "2"; scaffold_1989 StringTie exon 79215 79413 1000 + . gene_id "MSTRG.39901"; transcript_id "MSTRG.39901.1"; exon_number "1"; scaffold_1989 StringTie exon 81217 81227 1000 + . gene_id "MSTRG.39901"; transcript_id "MSTRG.39901.1"; exon_number "2"; scaffold_1989 StringTie exon 88885 89237 1000 . . gene_id "MSTRG.39902"; transcript_id "MSTRG.39902.1"; exon_number "1"; scaffold_199 StringTie exon 155305 155545 1000 . . gene_id "MSTRG.39933"; transcript_id "MSTRG.39933.1"; exon_number "1"; scaffold_199 StringTie exon 752917 753116 1000 - . gene_id "MSTRG.39972"; transcript_id "MSTRG.39972.1"; exon_number "1"; scaffold_199 StringTie exon 753210 753310 1000 - . gene_id "MSTRG.39972"; transcript_id "MSTRG.39972.1"; exon_number "2"; scaffold_199 StringTie exon 753421 753563 1000 - . gene_id "MSTRG.39972"; transcript_id "MSTRG.39972.1"; exon_number "3"; scaffold_199 StringTie exon 753714 753891 1000 - . gene_id "MSTRG.39972"; transcript_id "MSTRG.39972.1"; exon_number "4"; scaffold_199 StringTie exon 781910 781928 1000 + . gene_id "MSTRG.39976"; transcript_id "MSTRG.39976.1"; exon_number "1"; scaffold_199 StringTie exon 782116 782281 1000 + . gene_id "MSTRG.39976"; transcript_id "MSTRG.39976.1"; exon_number "2"; scaffold_199 StringTie exon 782392 782438 1000 + . gene_id "MSTRG.39976"; transcript_id "MSTRG.39976.1"; exon_number "3"; scaffold_199 StringTie exon 893807 893912 1000 + . gene_id "MSTRG.39987"; transcript_id "MSTRG.39987.1"; exon_number "1"; scaffold_199 StringTie exon 894657 894763 1000 + . gene_id "MSTRG.39987"; transcript_id "MSTRG.39987.1"; exon_number "2"; scaffold_199 StringTie exon 894970 895034 1000 + . gene_id "MSTRG.39987"; transcript_id "MSTRG.39987.1"; exon_number "3"; scaffold_199 StringTie exon 982173 982203 1000 + . gene_id "MSTRG.39991"; transcript_id "MSTRG.39991.1"; exon_number "1"; scaffold_199 StringTie exon 982371 982466 1000 + . gene_id "MSTRG.39991"; transcript_id "MSTRG.39991.1"; exon_number "2"; scaffold_199 StringTie exon 982621 982785 1000 + . gene_id "MSTRG.39991"; transcript_id "MSTRG.39991.1"; exon_number "3"; scaffold_199 StringTie exon 982901 983281 1000 + . gene_id "MSTRG.39991"; transcript_id "MSTRG.39991.1"; exon_number "4"; scaffold_199 StringTie exon 1140150 1140351 1000 . . gene_id "MSTRG.40005"; transcript_id "MSTRG.40005.1"; exon_number "1"; scaffold_199 StringTie exon 1143138 1144442 1000 - . gene_id "MSTRG.40006"; transcript_id "MSTRG.40006.1"; exon_number "1"; scaffold_199 StringTie exon 1151454 1151592 1000 - . gene_id "MSTRG.40008"; transcript_id "MSTRG.40008.1"; exon_number "1"; scaffold_199 StringTie exon 1151819 1151984 1000 - . gene_id "MSTRG.40008"; transcript_id "MSTRG.40008.1"; exon_number "2"; scaffold_199 StringTie exon 1254032 1254266 1000 . . gene_id "MSTRG.40014"; transcript_id "MSTRG.40014.1"; exon_number "1"; scaffold_19903 StringTie exon 524 1200 1000 . . gene_id "MSTRG.40024"; transcript_id "MSTRG.40024.1"; exon_number "1"; scaffold_1992 StringTie exon 10771 11006 1000 . . gene_id "MSTRG.40057"; transcript_id "MSTRG.40057.1"; exon_number "1"; scaffold_1993 StringTie exon 17279 17682 1000 . . gene_id "MSTRG.40081"; transcript_id "MSTRG.40081.1"; exon_number "1"; scaffold_1993 StringTie exon 21491 21702 1000 . . gene_id "MSTRG.40085"; transcript_id "MSTRG.40085.1"; exon_number "1"; scaffold_1993 StringTie exon 52031 52241 1000 . . gene_id "MSTRG.40089"; transcript_id "MSTRG.40089.1"; exon_number "1"; scaffold_1994 StringTie exon 10646 10922 1000 . . gene_id "MSTRG.40102"; transcript_id "MSTRG.40102.1"; exon_number "1"; scaffold_1994 StringTie exon 50942 51601 1000 . . gene_id "MSTRG.40108"; transcript_id "MSTRG.40108.1"; exon_number "1"; scaffold_1994 StringTie exon 55087 55268 1000 + . gene_id "MSTRG.40110"; transcript_id "MSTRG.40110.1"; exon_number "1"; scaffold_1994 StringTie exon 57345 57462 1000 + . gene_id "MSTRG.40110"; transcript_id "MSTRG.40110.1"; exon_number "2"; scaffold_1995 StringTie exon 15483 15536 1000 + . gene_id "MSTRG.40121"; transcript_id "MSTRG.40121.3"; exon_number "1"; scaffold_1995 StringTie exon 23706 23974 1000 + . gene_id "MSTRG.40121"; transcript_id "MSTRG.40121.3"; exon_number "2"; scaffold_1995 StringTie exon 24606 24812 1000 + . gene_id "MSTRG.40121"; transcript_id "MSTRG.40121.3"; exon_number "3"; scaffold_1996 StringTie exon 2654 2853 1000 . . gene_id "MSTRG.40138"; transcript_id "MSTRG.40138.1"; exon_number "1"; scaffold_1996 StringTie exon 53717 53962 1000 . . gene_id "MSTRG.40148"; transcript_id "MSTRG.40148.1"; exon_number "1"; scaffold_1997 StringTie exon 7186 7687 1000 . . gene_id "MSTRG.40159"; transcript_id "MSTRG.40159.1"; exon_number "1"; scaffold_1997 StringTie exon 37776 38083 1000 . . gene_id "MSTRG.40164"; transcript_id "MSTRG.40164.1"; exon_number "1"; scaffold_19980 StringTie exon 849 1194 1000 . . gene_id "MSTRG.40196"; transcript_id "MSTRG.40196.1"; exon_number "1"; scaffold_1999 StringTie exon 46406 46669 1000 . . gene_id "MSTRG.40202"; transcript_id "MSTRG.40202.1"; exon_number "1"; scaffold_1999 StringTie exon 79318 79547 1000 . . gene_id "MSTRG.40208"; transcript_id "MSTRG.40208.1"; exon_number "1"; scaffold_2 StringTie exon 740302 740420 1000 + . gene_id "MSTRG.40249"; transcript_id "MSTRG.40249.1"; exon_number "1"; scaffold_2 StringTie exon 746524 746615 1000 + . gene_id "MSTRG.40249"; transcript_id "MSTRG.40249.1"; exon_number "2"; scaffold_2 StringTie exon 747379 747522 1000 + . gene_id "MSTRG.40249"; transcript_id "MSTRG.40249.1"; exon_number "3"; scaffold_2 StringTie exon 764464 764501 1000 + . gene_id "MSTRG.40249"; transcript_id "MSTRG.40249.1"; exon_number "4"; scaffold_2 StringTie exon 1267899 1268220 1000 . . gene_id "MSTRG.40271"; transcript_id "MSTRG.40271.1"; exon_number "1"; scaffold_2 StringTie exon 1307193 1307398 1000 . . gene_id "MSTRG.40272"; transcript_id "MSTRG.40272.1"; exon_number "1"; scaffold_2 StringTie exon 1602551 1602982 1000 . . gene_id "MSTRG.40294"; transcript_id "MSTRG.40294.1"; exon_number "1"; scaffold_2 StringTie exon 1756650 1756864 1000 . . gene_id "MSTRG.40308"; transcript_id "MSTRG.40308.1"; exon_number "1"; scaffold_2 StringTie exon 2055806 2056303 1000 . . gene_id "MSTRG.40323"; transcript_id "MSTRG.40323.1"; exon_number "1"; scaffold_2 StringTie exon 2060391 2060593 1000 . . gene_id "MSTRG.40324"; transcript_id "MSTRG.40324.1"; exon_number "1"; scaffold_2 StringTie exon 2066420 2067358 1000 - . gene_id "MSTRG.40325"; transcript_id "MSTRG.40325.1"; exon_number "1"; scaffold_2 StringTie exon 2069955 2070089 1000 - . gene_id "MSTRG.40325"; transcript_id "MSTRG.40325.1"; exon_number "2"; scaffold_2 StringTie exon 2078467 2078536 1000 - . gene_id "MSTRG.40325"; transcript_id "MSTRG.40325.1"; exon_number "3"; scaffold_2 StringTie exon 2368832 2369124 1000 - . gene_id "MSTRG.40344"; transcript_id "MSTRG.40344.1"; exon_number "1"; scaffold_2 StringTie exon 2369832 2370175 1000 - . gene_id "MSTRG.40344"; transcript_id "MSTRG.40344.1"; exon_number "2"; scaffold_2 StringTie exon 2370758 2370793 1000 - . gene_id "MSTRG.40344"; transcript_id "MSTRG.40344.1"; exon_number "3"; scaffold_2 StringTie exon 2743098 2743378 1000 . . gene_id "MSTRG.40363"; transcript_id "MSTRG.40363.1"; exon_number "1"; scaffold_2 StringTie exon 2953069 2953200 1000 - . gene_id "MSTRG.40371"; transcript_id "MSTRG.40371.1"; exon_number "1"; scaffold_2 StringTie exon 2955053 2955350 1000 - . gene_id "MSTRG.40371"; transcript_id "MSTRG.40371.1"; exon_number "2"; scaffold_2 StringTie exon 3205355 3205663 1000 . . gene_id "MSTRG.40387"; transcript_id "MSTRG.40387.1"; exon_number "1"; scaffold_2 StringTie exon 3208710 3208928 1000 . . gene_id "MSTRG.40388"; transcript_id "MSTRG.40388.1"; exon_number "1"; scaffold_2 StringTie exon 3213989 3214299 1000 . . gene_id "MSTRG.40389"; transcript_id "MSTRG.40389.1"; exon_number "1"; scaffold_2 StringTie exon 3279618 3280112 1000 - . gene_id "MSTRG.40391"; transcript_id "MSTRG.40391.1"; exon_number "1"; scaffold_2 StringTie exon 3280332 3280439 1000 - . gene_id "MSTRG.40391"; transcript_id "MSTRG.40391.1"; exon_number "2"; scaffold_2 StringTie exon 3280892 3281005 1000 - . gene_id "MSTRG.40391"; transcript_id "MSTRG.40391.1"; exon_number "3"; scaffold_2 StringTie exon 3281424 3281552 1000 - . gene_id "MSTRG.40391"; transcript_id "MSTRG.40391.1"; exon_number "4"; scaffold_2 StringTie exon 3283152 3283184 1000 - . gene_id "MSTRG.40391"; transcript_id "MSTRG.40391.1"; exon_number "5"; scaffold_2 StringTie exon 3283568 3283633 1000 - . gene_id "MSTRG.40391"; transcript_id "MSTRG.40391.1"; exon_number "6"; scaffold_2 StringTie exon 3286951 3287101 1000 - . gene_id "MSTRG.40391"; transcript_id "MSTRG.40391.1"; exon_number "7"; scaffold_2 StringTie exon 3797747 3798029 1000 . . gene_id "MSTRG.40409"; transcript_id "MSTRG.40409.1"; exon_number "1"; scaffold_20 StringTie exon 451123 451255 1000 + . gene_id "MSTRG.40474"; transcript_id "MSTRG.40474.1"; exon_number "1"; scaffold_20 StringTie exon 451428 451517 1000 + . gene_id "MSTRG.40474"; transcript_id "MSTRG.40474.1"; exon_number "2"; scaffold_20 StringTie exon 574395 574641 1000 . . gene_id "MSTRG.40480"; transcript_id "MSTRG.40480.1"; exon_number "1"; scaffold_20 StringTie exon 856827 857162 1000 . . gene_id "MSTRG.40501"; transcript_id "MSTRG.40501.1"; exon_number "1"; scaffold_20 StringTie exon 1139727 1139987 1000 . . gene_id "MSTRG.40524"; transcript_id "MSTRG.40524.1"; exon_number "1"; scaffold_20 StringTie exon 1156122 1156434 1000 . . gene_id "MSTRG.40527"; transcript_id "MSTRG.40527.1"; exon_number "1"; scaffold_20 StringTie exon 1192970 1193155 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "1"; scaffold_20 StringTie exon 1194065 1194265 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "2"; scaffold_20 StringTie exon 1194423 1194504 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "3"; scaffold_20 StringTie exon 1194623 1194789 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "4"; scaffold_20 StringTie exon 1194883 1195046 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "5"; scaffold_20 StringTie exon 1195692 1195889 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "6"; scaffold_20 StringTie exon 1202746 1202945 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "7"; scaffold_20 StringTie exon 1203664 1203854 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "8"; scaffold_20 StringTie exon 1207546 1207794 1000 - . gene_id "MSTRG.40531"; transcript_id "MSTRG.40531.1"; exon_number "9"; scaffold_20 StringTie exon 1217495 1217955 1000 . . gene_id "MSTRG.40535"; transcript_id "MSTRG.40535.1"; exon_number "1"; scaffold_20 StringTie exon 1255823 1255898 1000 + . gene_id "MSTRG.40542"; transcript_id "MSTRG.40542.1"; exon_number "1"; scaffold_20 StringTie exon 1256780 1256840 1000 + . gene_id "MSTRG.40542"; transcript_id "MSTRG.40542.1"; exon_number "2"; scaffold_20 StringTie exon 1256976 1257085 1000 + . gene_id "MSTRG.40542"; transcript_id "MSTRG.40542.1"; exon_number "3"; scaffold_20 StringTie exon 1260786 1261016 1000 + . gene_id "MSTRG.40543"; transcript_id "MSTRG.40543.1"; exon_number "1"; scaffold_20 StringTie exon 1490169 1491626 1000 . . gene_id "MSTRG.40571"; transcript_id "MSTRG.40571.1"; exon_number "1"; scaffold_20 StringTie exon 1545978 1546320 1000 . . gene_id "MSTRG.40576"; transcript_id "MSTRG.40576.1"; exon_number "1"; scaffold_20 StringTie exon 1827291 1827403 1000 + . gene_id "MSTRG.40593"; transcript_id "MSTRG.40593.1"; exon_number "1"; scaffold_20 StringTie exon 1828050 1828184 1000 + . gene_id "MSTRG.40593"; transcript_id "MSTRG.40593.1"; exon_number "2"; scaffold_20 StringTie exon 1828891 1829040 1000 + . gene_id "MSTRG.40593"; transcript_id "MSTRG.40593.1"; exon_number "3"; scaffold_20 StringTie exon 1842471 1842626 1000 + . gene_id "MSTRG.40595"; transcript_id "MSTRG.40595.1"; exon_number "1"; scaffold_20 StringTie exon 1842814 1842929 1000 + . gene_id "MSTRG.40595"; transcript_id "MSTRG.40595.1"; exon_number "2"; scaffold_20 StringTie exon 1843043 1843125 1000 + . gene_id "MSTRG.40595"; transcript_id "MSTRG.40595.1"; exon_number "3"; scaffold_20 StringTie exon 1873371 1873584 1000 . . gene_id "MSTRG.40601"; transcript_id "MSTRG.40601.1"; exon_number "1"; scaffold_20 StringTie exon 1908010 1908267 1000 . . gene_id "MSTRG.40604"; transcript_id "MSTRG.40604.1"; exon_number "1"; scaffold_200 StringTie exon 890550 890805 1000 . . gene_id "MSTRG.40703"; transcript_id "MSTRG.40703.1"; exon_number "1"; scaffold_200 StringTie exon 1008729 1009396 1000 . . gene_id "MSTRG.40711"; transcript_id "MSTRG.40711.1"; exon_number "1"; scaffold_2001 StringTie exon 96241 96457 1000 . . gene_id "MSTRG.40739"; transcript_id "MSTRG.40739.1"; exon_number "1"; scaffold_20019 StringTie exon 5832 6038 1000 . . gene_id "MSTRG.40746"; transcript_id "MSTRG.40746.1"; exon_number "1"; scaffold_2005 StringTie exon 8841 8879 1000 + . gene_id "MSTRG.40803"; transcript_id "MSTRG.40803.1"; exon_number "1"; scaffold_2005 StringTie exon 9365 9537 1000 + . gene_id "MSTRG.40803"; transcript_id "MSTRG.40803.1"; exon_number "2"; scaffold_2006 StringTie exon 2554 2782 1000 . . gene_id "MSTRG.40821"; transcript_id "MSTRG.40821.1"; exon_number "1"; scaffold_2006 StringTie exon 16480 17147 1000 . . gene_id "MSTRG.40822"; transcript_id "MSTRG.40822.1"; exon_number "1"; scaffold_20066 StringTie exon 1499 2099 1000 . . gene_id "MSTRG.40836"; transcript_id "MSTRG.40836.1"; exon_number "1"; scaffold_2007 StringTie exon 79266 79485 1000 + . gene_id "MSTRG.40842"; transcript_id "MSTRG.40842.1"; exon_number "1"; scaffold_2008 StringTie exon 85314 85608 1000 . . gene_id "MSTRG.40860"; transcript_id "MSTRG.40860.1"; exon_number "1"; scaffold_20089 StringTie exon 5211 5507 1000 . . gene_id "MSTRG.40873"; transcript_id "MSTRG.40873.1"; exon_number "1"; scaffold_20095 StringTie exon 4019 4167 1000 - . gene_id "MSTRG.40882"; transcript_id "MSTRG.40882.1"; exon_number "1"; scaffold_20095 StringTie exon 5896 6055 1000 - . gene_id "MSTRG.40882"; transcript_id "MSTRG.40882.1"; exon_number "2"; scaffold_20095 StringTie exon 7301 7348 1000 - . gene_id "MSTRG.40882"; transcript_id "MSTRG.40882.1"; exon_number "3"; scaffold_201 StringTie exon 686844 686954 1000 + . gene_id "MSTRG.40921"; transcript_id "MSTRG.40921.1"; exon_number "1"; scaffold_201 StringTie exon 688115 688252 1000 + . gene_id "MSTRG.40921"; transcript_id "MSTRG.40921.1"; exon_number "2"; scaffold_201 StringTie exon 698900 698959 1000 + . gene_id "MSTRG.40921"; transcript_id "MSTRG.40921.1"; exon_number "3"; scaffold_201 StringTie exon 864806 865088 1000 . . gene_id "MSTRG.40931"; transcript_id "MSTRG.40931.1"; exon_number "1"; scaffold_201 StringTie exon 1028604 1029920 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "1"; scaffold_201 StringTie exon 1031723 1031869 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "2"; scaffold_201 StringTie exon 1032458 1032748 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "3"; scaffold_201 StringTie exon 1032870 1032950 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "4"; scaffold_201 StringTie exon 1033065 1033170 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "5"; scaffold_201 StringTie exon 1033415 1033505 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "6"; scaffold_201 StringTie exon 1033689 1033791 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "7"; scaffold_201 StringTie exon 1034140 1034194 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "8"; scaffold_201 StringTie exon 1042011 1042988 1000 - . gene_id "MSTRG.40945"; transcript_id "MSTRG.40945.1"; exon_number "9"; scaffold_201 StringTie exon 1043085 1043482 1000 . . gene_id "MSTRG.40946"; transcript_id "MSTRG.40946.1"; exon_number "1"; scaffold_201 StringTie exon 1272799 1273027 1000 . . gene_id "MSTRG.40958"; transcript_id "MSTRG.40958.1"; exon_number "1"; scaffold_2010 StringTie exon 111045 111267 1000 . . gene_id "MSTRG.40967"; transcript_id "MSTRG.40967.1"; exon_number "1"; scaffold_2011 StringTie exon 441 787 1000 . . gene_id "MSTRG.40976"; transcript_id "MSTRG.40976.1"; exon_number "1"; scaffold_2011 StringTie exon 20265 20488 1000 . . gene_id "MSTRG.40978"; transcript_id "MSTRG.40978.1"; exon_number "1"; scaffold_2012 StringTie exon 130903 131170 1000 . . gene_id "MSTRG.41010"; transcript_id "MSTRG.41010.1"; exon_number "1"; scaffold_20123 StringTie exon 5775 7005 1000 . . gene_id "MSTRG.41016"; transcript_id "MSTRG.41016.1"; exon_number "1"; scaffold_2013 StringTie exon 1274 1539 1000 . . gene_id "MSTRG.41017"; transcript_id "MSTRG.41017.1"; exon_number "1"; scaffold_2015 StringTie exon 112971 113626 1000 . . gene_id "MSTRG.41066"; transcript_id "MSTRG.41066.1"; exon_number "1"; scaffold_2016 StringTie exon 35359 35707 1000 + . gene_id "MSTRG.41074"; transcript_id "MSTRG.41074.1"; exon_number "1"; scaffold_2016 StringTie exon 35828 35876 1000 + . gene_id "MSTRG.41074"; transcript_id "MSTRG.41074.1"; exon_number "2"; scaffold_2016 StringTie exon 75141 75252 1000 - . gene_id "MSTRG.41079"; transcript_id "MSTRG.41079.1"; exon_number "1"; scaffold_2016 StringTie exon 75407 75606 1000 - . gene_id "MSTRG.41079"; transcript_id "MSTRG.41079.1"; exon_number "2"; scaffold_2016 StringTie exon 102302 102536 1000 . . gene_id "MSTRG.41083"; transcript_id "MSTRG.41083.1"; exon_number "1"; scaffold_20161 StringTie exon 7027 7395 1000 . . gene_id "MSTRG.41087"; transcript_id "MSTRG.41087.1"; exon_number "1"; scaffold_20165 StringTie exon 6419 6661 1000 . . gene_id "MSTRG.41092"; transcript_id "MSTRG.41092.1"; exon_number "1"; scaffold_2019 StringTie exon 65797 65925 1000 + . gene_id "MSTRG.41125"; transcript_id "MSTRG.41125.1"; exon_number "1"; scaffold_2019 StringTie exon 71608 71683 1000 + . gene_id "MSTRG.41125"; transcript_id "MSTRG.41125.1"; exon_number "2"; scaffold_2019 StringTie exon 79254 79396 1000 + . gene_id "MSTRG.41126"; transcript_id "MSTRG.41126.1"; exon_number "1"; scaffold_2019 StringTie exon 85846 86279 1000 + . gene_id "MSTRG.41126"; transcript_id "MSTRG.41126.1"; exon_number "2"; scaffold_20195 StringTie exon 1652 1953 1000 . . gene_id "MSTRG.41138"; transcript_id "MSTRG.41138.1"; exon_number "1"; scaffold_202 StringTie exon 27909 28020 1000 + . gene_id "MSTRG.41142"; transcript_id "MSTRG.41142.1"; exon_number "1"; scaffold_202 StringTie exon 28540 28678 1000 + . gene_id "MSTRG.41142"; transcript_id "MSTRG.41142.1"; exon_number "2"; scaffold_202 StringTie exon 33173 35624 1000 + . gene_id "MSTRG.41142"; transcript_id "MSTRG.41142.1"; exon_number "3"; scaffold_202 StringTie exon 353696 353985 1000 . . gene_id "MSTRG.41158"; transcript_id "MSTRG.41158.1"; exon_number "1"; scaffold_202 StringTie exon 518692 518918 1000 . . gene_id "MSTRG.41175"; transcript_id "MSTRG.41175.1"; exon_number "1"; scaffold_202 StringTie exon 752427 752631 1000 . . gene_id "MSTRG.41188"; transcript_id "MSTRG.41188.1"; exon_number "1"; scaffold_202 StringTie exon 812118 812445 1000 . . gene_id "MSTRG.41192"; transcript_id "MSTRG.41192.1"; exon_number "1"; scaffold_202 StringTie exon 814932 815192 1000 . . gene_id "MSTRG.41193"; transcript_id "MSTRG.41193.1"; exon_number "1"; scaffold_202 StringTie exon 892712 894474 1000 . . gene_id "MSTRG.41198"; transcript_id "MSTRG.41198.1"; exon_number "1"; scaffold_202 StringTie exon 1088537 1089029 1000 . . gene_id "MSTRG.41225"; transcript_id "MSTRG.41225.1"; exon_number "1"; scaffold_202 StringTie exon 1265461 1266455 1000 - . gene_id "MSTRG.41250"; transcript_id "MSTRG.41250.1"; exon_number "1"; scaffold_202 StringTie exon 1266568 1266602 1000 - . gene_id "MSTRG.41250"; transcript_id "MSTRG.41250.1"; exon_number "2"; scaffold_2020 StringTie exon 8856 8891 1000 - . gene_id "MSTRG.41253"; transcript_id "MSTRG.41253.1"; exon_number "1"; scaffold_2020 StringTie exon 21578 21753 1000 - . gene_id "MSTRG.41253"; transcript_id "MSTRG.41253.1"; exon_number "2"; scaffold_2020 StringTie exon 12103 12351 1000 . . gene_id "MSTRG.41254"; transcript_id "MSTRG.41254.1"; exon_number "1"; scaffold_2020 StringTie exon 61073 61320 1000 . . gene_id "MSTRG.41265"; transcript_id "MSTRG.41265.1"; exon_number "1"; scaffold_2020 StringTie exon 84234 84524 1000 . . gene_id "MSTRG.41266"; transcript_id "MSTRG.41266.1"; exon_number "1"; scaffold_2021 StringTie exon 112064 112323 1000 . . gene_id "MSTRG.41283"; transcript_id "MSTRG.41283.1"; exon_number "1"; scaffold_20212 StringTie exon 2267 2596 1000 . . gene_id "MSTRG.41286"; transcript_id "MSTRG.41286.1"; exon_number "1"; scaffold_20230 StringTie exon 1737 1971 1000 . . gene_id "MSTRG.41335"; transcript_id "MSTRG.41335.1"; exon_number "1"; scaffold_2024 StringTie exon 32769 32982 1000 . . gene_id "MSTRG.41346"; transcript_id "MSTRG.41346.1"; exon_number "1"; scaffold_2025 StringTie exon 50137 50202 1000 + . gene_id "MSTRG.41374"; transcript_id "MSTRG.41374.1"; exon_number "1"; scaffold_2025 StringTie exon 50378 50455 1000 + . gene_id "MSTRG.41374"; transcript_id "MSTRG.41374.1"; exon_number "2"; scaffold_2025 StringTie exon 50714 50881 1000 + . gene_id "MSTRG.41374"; transcript_id "MSTRG.41374.1"; exon_number "3"; scaffold_2025 StringTie exon 51252 51357 1000 + . gene_id "MSTRG.41374"; transcript_id "MSTRG.41374.1"; exon_number "4"; scaffold_2025 StringTie exon 51441 51872 1000 + . gene_id "MSTRG.41374"; transcript_id "MSTRG.41374.1"; exon_number "5"; scaffold_20253 StringTie exon 7432 7774 1000 . . gene_id "MSTRG.41390"; transcript_id "MSTRG.41390.1"; exon_number "1"; scaffold_2026 StringTie exon 101969 102283 1000 . . gene_id "MSTRG.41399"; transcript_id "MSTRG.41399.1"; exon_number "1"; scaffold_2026 StringTie exon 113438 113774 1000 . . gene_id "MSTRG.41402"; transcript_id "MSTRG.41402.1"; exon_number "1"; scaffold_20265 StringTie exon 7775 7998 1000 . . gene_id "MSTRG.41414"; transcript_id "MSTRG.41414.1"; exon_number "1"; scaffold_2027 StringTie exon 39170 39376 1000 . . gene_id "MSTRG.41420"; transcript_id "MSTRG.41420.1"; exon_number "1"; scaffold_2029 StringTie exon 50105 50390 1000 . . gene_id "MSTRG.41462"; transcript_id "MSTRG.41462.1"; exon_number "1"; scaffold_2029 StringTie exon 60462 60646 1000 - . gene_id "MSTRG.41463"; transcript_id "MSTRG.41463.1"; exon_number "1"; scaffold_2029 StringTie exon 77779 78125 1000 - . gene_id "MSTRG.41463"; transcript_id "MSTRG.41463.1"; exon_number "2"; scaffold_20298 StringTie exon 3719 4011 1000 . . gene_id "MSTRG.41474"; transcript_id "MSTRG.41474.1"; exon_number "1"; scaffold_203 StringTie exon 53733 55006 1000 - . gene_id "MSTRG.41476"; transcript_id "MSTRG.41476.1"; exon_number "1"; scaffold_203 StringTie exon 103358 103613 1000 . . gene_id "MSTRG.41479"; transcript_id "MSTRG.41479.1"; exon_number "1"; scaffold_203 StringTie exon 210233 210464 1000 . . gene_id "MSTRG.41485"; transcript_id "MSTRG.41485.1"; exon_number "1"; scaffold_203 StringTie exon 408691 408919 1000 . . gene_id "MSTRG.41495"; transcript_id "MSTRG.41495.1"; exon_number "1"; scaffold_203 StringTie exon 511243 511472 1000 . . gene_id "MSTRG.41496"; transcript_id "MSTRG.41496.1"; exon_number "1"; scaffold_203 StringTie exon 657070 657311 1000 . . gene_id "MSTRG.41508"; transcript_id "MSTRG.41508.1"; exon_number "1"; scaffold_203 StringTie exon 698682 699011 1000 . . gene_id "MSTRG.41511"; transcript_id "MSTRG.41511.1"; exon_number "1"; scaffold_203 StringTie exon 762092 762138 1000 + . gene_id "MSTRG.41518"; transcript_id "MSTRG.41518.1"; exon_number "1"; scaffold_203 StringTie exon 762308 762409 1000 + . gene_id "MSTRG.41518"; transcript_id "MSTRG.41518.1"; exon_number "2"; scaffold_203 StringTie exon 762604 762778 1000 + . gene_id "MSTRG.41518"; transcript_id "MSTRG.41518.1"; exon_number "3"; scaffold_203 StringTie exon 868852 869215 1000 . . gene_id "MSTRG.41530"; transcript_id "MSTRG.41530.1"; exon_number "1"; scaffold_203 StringTie exon 907253 908210 1000 . . gene_id "MSTRG.41533"; transcript_id "MSTRG.41533.1"; exon_number "1"; scaffold_203 StringTie exon 955544 955821 1000 . . gene_id "MSTRG.41537"; transcript_id "MSTRG.41537.1"; exon_number "1"; scaffold_203 StringTie exon 960144 960309 1000 - . gene_id "MSTRG.41538"; transcript_id "MSTRG.41538.1"; exon_number "1"; scaffold_203 StringTie exon 960389 960483 1000 - . gene_id "MSTRG.41538"; transcript_id "MSTRG.41538.1"; exon_number "2"; scaffold_203 StringTie exon 968105 968295 1000 - . gene_id "MSTRG.41542"; transcript_id "MSTRG.41542.1"; exon_number "1"; scaffold_203 StringTie exon 968988 969096 1000 - . gene_id "MSTRG.41542"; transcript_id "MSTRG.41542.1"; exon_number "2"; scaffold_203 StringTie exon 969316 969374 1000 - . gene_id "MSTRG.41542"; transcript_id "MSTRG.41542.1"; exon_number "3"; scaffold_203 StringTie exon 969566 969694 1000 - . gene_id "MSTRG.41542"; transcript_id "MSTRG.41542.1"; exon_number "4"; scaffold_203 StringTie exon 969975 970015 1000 - . gene_id "MSTRG.41542"; transcript_id "MSTRG.41542.1"; exon_number "5"; scaffold_203 StringTie exon 978350 978603 1000 - . gene_id "MSTRG.41543"; transcript_id "MSTRG.41543.1"; exon_number "1"; scaffold_203 StringTie exon 979230 979254 1000 - . gene_id "MSTRG.41543"; transcript_id "MSTRG.41543.1"; exon_number "2"; scaffold_2030 StringTie exon 5866 6163 1000 . . gene_id "MSTRG.41564"; transcript_id "MSTRG.41564.1"; exon_number "1"; scaffold_2033 StringTie exon 39903 40105 1000 . . gene_id "MSTRG.41609"; transcript_id "MSTRG.41609.1"; exon_number "1"; scaffold_2033 StringTie exon 59004 59073 1000 + . gene_id "MSTRG.41612"; transcript_id "MSTRG.41612.1"; exon_number "1"; scaffold_2033 StringTie exon 59858 60019 1000 + . gene_id "MSTRG.41612"; transcript_id "MSTRG.41612.1"; exon_number "2"; scaffold_2033 StringTie exon 60367 60594 1000 + . gene_id "MSTRG.41612"; transcript_id "MSTRG.41612.1"; exon_number "3"; scaffold_20343 StringTie exon 171 756 1000 . . gene_id "MSTRG.41625"; transcript_id "MSTRG.41625.1"; exon_number "1"; scaffold_20346 StringTie exon 5254 5571 1000 . . gene_id "MSTRG.41628"; transcript_id "MSTRG.41628.1"; exon_number "1"; scaffold_20348 StringTie exon 1498 1700 1000 . . gene_id "MSTRG.41630"; transcript_id "MSTRG.41630.1"; exon_number "1"; scaffold_20356 StringTie exon 6234 6362 1000 + . gene_id "MSTRG.41638"; transcript_id "MSTRG.41638.2"; exon_number "1"; scaffold_20356 StringTie exon 6609 6714 1000 + . gene_id "MSTRG.41638"; transcript_id "MSTRG.41638.2"; exon_number "2"; scaffold_20356 StringTie exon 7712 7833 1000 + . gene_id "MSTRG.41638"; transcript_id "MSTRG.41638.2"; exon_number "3"; scaffold_2037 StringTie exon 63909 64215 1000 - . gene_id "MSTRG.41656"; transcript_id "MSTRG.41656.1"; exon_number "1"; scaffold_2037 StringTie exon 106503 106716 1000 . . gene_id "MSTRG.41663"; transcript_id "MSTRG.41663.1"; exon_number "1"; scaffold_20379 StringTie exon 7541 7884 1000 . . gene_id "MSTRG.41670"; transcript_id "MSTRG.41670.1"; exon_number "1"; scaffold_2039 StringTie exon 1684 2206 1000 . . gene_id "MSTRG.41683"; transcript_id "MSTRG.41683.1"; exon_number "1"; scaffold_2039 StringTie exon 123904 124932 1000 . . gene_id "MSTRG.41696"; transcript_id "MSTRG.41696.1"; exon_number "1"; scaffold_204 StringTie exon 458596 459012 1000 . . gene_id "MSTRG.41731"; transcript_id "MSTRG.41731.1"; exon_number "1"; scaffold_204 StringTie exon 506512 506736 1000 . . gene_id "MSTRG.41732"; transcript_id "MSTRG.41732.1"; exon_number "1"; scaffold_20406 StringTie exon 7425 7770 1000 . . gene_id "MSTRG.41796"; transcript_id "MSTRG.41796.1"; exon_number "1"; scaffold_20421 StringTie exon 96 422 1000 . . gene_id "MSTRG.41837"; transcript_id "MSTRG.41837.1"; exon_number "1"; scaffold_2045 StringTie exon 38054 38189 1000 + . gene_id "MSTRG.41884"; transcript_id "MSTRG.41884.1"; exon_number "1"; scaffold_2045 StringTie exon 38311 38463 1000 + . gene_id "MSTRG.41884"; transcript_id "MSTRG.41884.1"; exon_number "2"; scaffold_20455 StringTie exon 7347 7684 1000 . . gene_id "MSTRG.41897"; transcript_id "MSTRG.41897.1"; exon_number "1"; scaffold_2046 StringTie exon 28484 29111 1000 . . gene_id "MSTRG.41899"; transcript_id "MSTRG.41899.1"; exon_number "1"; scaffold_20464 StringTie exon 1328 1606 1000 . . gene_id "MSTRG.41911"; transcript_id "MSTRG.41911.1"; exon_number "1"; scaffold_20465 StringTie exon 6806 7072 1000 . . gene_id "MSTRG.41913"; transcript_id "MSTRG.41913.1"; exon_number "1"; scaffold_2048 StringTie exon 89026 89081 1000 - . gene_id "MSTRG.41942"; transcript_id "MSTRG.41942.1"; exon_number "1"; scaffold_2048 StringTie exon 89205 89383 1000 - . gene_id "MSTRG.41942"; transcript_id "MSTRG.41942.1"; exon_number "2"; scaffold_2048 StringTie exon 89544 89693 1000 - . gene_id "MSTRG.41942"; transcript_id "MSTRG.41942.1"; exon_number "3"; scaffold_2048 StringTie exon 90081 90301 1000 - . gene_id "MSTRG.41942"; transcript_id "MSTRG.41942.1"; exon_number "4"; scaffold_2048 StringTie exon 90497 90580 1000 - . gene_id "MSTRG.41942"; transcript_id "MSTRG.41942.1"; exon_number "5"; scaffold_2048 StringTie exon 90797 90904 1000 - . gene_id "MSTRG.41942"; transcript_id "MSTRG.41942.1"; exon_number "6"; scaffold_20482 StringTie exon 2858 3208 1000 . . gene_id "MSTRG.41949"; transcript_id "MSTRG.41949.1"; exon_number "1"; scaffold_20495 StringTie exon 395 645 1000 . . gene_id "MSTRG.41967"; transcript_id "MSTRG.41967.1"; exon_number "1"; scaffold_205 StringTie exon 42508 42707 1000 . . gene_id "MSTRG.41971"; transcript_id "MSTRG.41971.1"; exon_number "1"; scaffold_205 StringTie exon 251285 251891 1000 . . gene_id "MSTRG.41977"; transcript_id "MSTRG.41977.1"; exon_number "1"; scaffold_205 StringTie exon 469518 469820 1000 . . gene_id "MSTRG.41991"; transcript_id "MSTRG.41991.1"; exon_number "1"; scaffold_205 StringTie exon 500747 500947 1000 . . gene_id "MSTRG.41993"; transcript_id "MSTRG.41993.1"; exon_number "1"; scaffold_205 StringTie exon 955694 955914 1000 . . gene_id "MSTRG.42014"; transcript_id "MSTRG.42014.1"; exon_number "1"; scaffold_205 StringTie exon 1053379 1053930 1000 . . gene_id "MSTRG.42020"; transcript_id "MSTRG.42020.1"; exon_number "1"; scaffold_2051 StringTie exon 105991 106198 1000 . . gene_id "MSTRG.42044"; transcript_id "MSTRG.42044.1"; exon_number "1"; scaffold_20515 StringTie exon 7312 7887 1000 . . gene_id "MSTRG.42047"; transcript_id "MSTRG.42047.1"; exon_number "1"; scaffold_2052 StringTie exon 63886 64390 1000 . . gene_id "MSTRG.42058"; transcript_id "MSTRG.42058.1"; exon_number "1"; scaffold_2052 StringTie exon 81344 82096 1000 . . gene_id "MSTRG.42061"; transcript_id "MSTRG.42061.1"; exon_number "1"; scaffold_20525 StringTie exon 2571 2847 1000 . . gene_id "MSTRG.42067"; transcript_id "MSTRG.42067.1"; exon_number "1"; scaffold_2053 StringTie exon 76006 76209 1000 . . gene_id "MSTRG.42076"; transcript_id "MSTRG.42076.1"; exon_number "1"; scaffold_20537 StringTie exon 2365 2589 1000 . . gene_id "MSTRG.42084"; transcript_id "MSTRG.42084.1"; exon_number "1"; scaffold_2054 StringTie exon 93348 93437 1000 - . gene_id "MSTRG.42094"; transcript_id "MSTRG.42094.1"; exon_number "1"; scaffold_2054 StringTie exon 94793 94923 1000 - . gene_id "MSTRG.42094"; transcript_id "MSTRG.42094.1"; exon_number "2"; scaffold_2054 StringTie exon 109430 109667 1000 - . gene_id "MSTRG.42094"; transcript_id "MSTRG.42094.1"; exon_number "3"; scaffold_20542 StringTie exon 128 1076 1000 . . gene_id "MSTRG.42095"; transcript_id "MSTRG.42095.1"; exon_number "1"; scaffold_2055 StringTie exon 64202 64420 1000 . . gene_id "MSTRG.42105"; transcript_id "MSTRG.42105.1"; exon_number "1"; scaffold_2055 StringTie exon 118537 118840 1000 . . gene_id "MSTRG.42113"; transcript_id "MSTRG.42113.1"; exon_number "1"; scaffold_20550 StringTie exon 1459 1748 1000 - . gene_id "MSTRG.42115"; transcript_id "MSTRG.42115.1"; exon_number "1"; scaffold_20550 StringTie exon 2043 2124 1000 - . gene_id "MSTRG.42115"; transcript_id "MSTRG.42115.1"; exon_number "2"; scaffold_2059 StringTie exon 3410 3616 1000 + . gene_id "MSTRG.42168"; transcript_id "MSTRG.42168.1"; exon_number "1"; scaffold_2059 StringTie exon 10083 10319 1000 . . gene_id "MSTRG.42169"; transcript_id "MSTRG.42169.1"; exon_number "1"; scaffold_206 StringTie exon 135777 135936 1000 + . gene_id "MSTRG.42198"; transcript_id "MSTRG.42198.1"; exon_number "1"; scaffold_206 StringTie exon 139097 139259 1000 + . gene_id "MSTRG.42198"; transcript_id "MSTRG.42198.1"; exon_number "2"; scaffold_206 StringTie exon 309504 309712 1000 . . gene_id "MSTRG.42217"; transcript_id "MSTRG.42217.1"; exon_number "1"; scaffold_206 StringTie exon 466494 466645 1000 - . gene_id "MSTRG.42242"; transcript_id "MSTRG.42242.2"; exon_number "1"; scaffold_206 StringTie exon 466892 467039 1000 - . gene_id "MSTRG.42242"; transcript_id "MSTRG.42242.2"; exon_number "2"; scaffold_206 StringTie exon 489018 489138 1000 - . gene_id "MSTRG.42245"; transcript_id "MSTRG.42245.1"; exon_number "1"; scaffold_206 StringTie exon 490846 490941 1000 - . gene_id "MSTRG.42245"; transcript_id "MSTRG.42245.1"; exon_number "2"; scaffold_206 StringTie exon 491041 491189 1000 - . gene_id "MSTRG.42245"; transcript_id "MSTRG.42245.1"; exon_number "3"; scaffold_206 StringTie exon 635863 636073 1000 . . gene_id "MSTRG.42255"; transcript_id "MSTRG.42255.1"; exon_number "1"; scaffold_206 StringTie exon 638134 638208 1000 + . gene_id "MSTRG.42256"; transcript_id "MSTRG.42256.1"; exon_number "1"; scaffold_206 StringTie exon 647454 647527 1000 + . gene_id "MSTRG.42256"; transcript_id "MSTRG.42256.1"; exon_number "2"; scaffold_206 StringTie exon 647868 648056 1000 + . gene_id "MSTRG.42256"; transcript_id "MSTRG.42256.1"; exon_number "3"; scaffold_206 StringTie exon 648205 648268 1000 + . gene_id "MSTRG.42256"; transcript_id "MSTRG.42256.1"; exon_number "4"; scaffold_206 StringTie exon 648729 648931 1000 + . gene_id "MSTRG.42256"; transcript_id "MSTRG.42256.1"; exon_number "5"; scaffold_206 StringTie exon 649726 649846 1000 + . gene_id "MSTRG.42256"; transcript_id "MSTRG.42256.1"; exon_number "6"; scaffold_206 StringTie exon 650066 650254 1000 + . gene_id "MSTRG.42256"; transcript_id "MSTRG.42256.1"; exon_number "7"; scaffold_206 StringTie exon 650573 650746 1000 + . gene_id "MSTRG.42256"; transcript_id "MSTRG.42256.1"; exon_number "8"; scaffold_206 StringTie exon 830025 830266 1000 . . gene_id "MSTRG.42270"; transcript_id "MSTRG.42270.1"; exon_number "1"; scaffold_206 StringTie exon 915008 915215 1000 . . gene_id "MSTRG.42279"; transcript_id "MSTRG.42279.1"; exon_number "1"; scaffold_206 StringTie exon 1049367 1049629 1000 . . gene_id "MSTRG.42287"; transcript_id "MSTRG.42287.1"; exon_number "1"; scaffold_2061 StringTie exon 49920 50194 1000 . . gene_id "MSTRG.42313"; transcript_id "MSTRG.42313.1"; exon_number "1"; scaffold_2062 StringTie exon 79715 79926 1000 . . gene_id "MSTRG.42337"; transcript_id "MSTRG.42337.1"; exon_number "1"; scaffold_2062 StringTie exon 104978 105203 1000 . . gene_id "MSTRG.42340"; transcript_id "MSTRG.42340.1"; exon_number "1"; scaffold_2063 StringTie exon 30106 30319 1000 . . gene_id "MSTRG.42357"; transcript_id "MSTRG.42357.1"; exon_number "1"; scaffold_2063 StringTie exon 47144 47443 1000 - . gene_id "MSTRG.42360"; transcript_id "MSTRG.42360.1"; exon_number "1"; scaffold_2063 StringTie exon 47553 47587 1000 - . gene_id "MSTRG.42360"; transcript_id "MSTRG.42360.1"; exon_number "2"; scaffold_2063 StringTie exon 48699 48759 1000 - . gene_id "MSTRG.42361"; transcript_id "MSTRG.42361.1"; exon_number "1"; scaffold_2063 StringTie exon 48836 48997 1000 - . gene_id "MSTRG.42361"; transcript_id "MSTRG.42361.1"; exon_number "2"; scaffold_2063 StringTie exon 51354 51376 1000 - . gene_id "MSTRG.42363"; transcript_id "MSTRG.42363.1"; exon_number "1"; scaffold_2063 StringTie exon 51744 51800 1000 - . gene_id "MSTRG.42363"; transcript_id "MSTRG.42363.1"; exon_number "2"; scaffold_2063 StringTie exon 51929 52035 1000 - . gene_id "MSTRG.42363"; transcript_id "MSTRG.42363.1"; exon_number "3"; scaffold_2063 StringTie exon 52186 52265 1000 - . gene_id "MSTRG.42363"; transcript_id "MSTRG.42363.1"; exon_number "4"; scaffold_2063 StringTie exon 66425 67915 1000 - . gene_id "MSTRG.42366"; transcript_id "MSTRG.42366.1"; exon_number "1"; scaffold_2063 StringTie exon 68013 68175 1000 - . gene_id "MSTRG.42366"; transcript_id "MSTRG.42366.1"; exon_number "2"; scaffold_2063 StringTie exon 68410 68538 1000 - . gene_id "MSTRG.42366"; transcript_id "MSTRG.42366.1"; exon_number "3"; scaffold_2063 StringTie exon 68922 68973 1000 - . gene_id "MSTRG.42366"; transcript_id "MSTRG.42366.1"; exon_number "4"; scaffold_20647 StringTie exon 159 383 1000 . . gene_id "MSTRG.42389"; transcript_id "MSTRG.42389.1"; exon_number "1"; scaffold_20662 StringTie exon 7245 7458 1000 . . gene_id "MSTRG.42423"; transcript_id "MSTRG.42423.1"; exon_number "1"; scaffold_20663 StringTie exon 5039 5265 1000 . . gene_id "MSTRG.42424"; transcript_id "MSTRG.42424.1"; exon_number "1"; scaffold_2067 StringTie exon 23871 24115 1000 . . gene_id "MSTRG.42430"; transcript_id "MSTRG.42430.1"; exon_number "1"; scaffold_2067 StringTie exon 76901 77116 1000 . . gene_id "MSTRG.42438"; transcript_id "MSTRG.42438.1"; exon_number "1"; scaffold_2067 StringTie exon 125033 125245 1000 . . gene_id "MSTRG.42444"; transcript_id "MSTRG.42444.1"; exon_number "1"; scaffold_207 StringTie exon 365278 365849 1000 . . gene_id "MSTRG.42495"; transcript_id "MSTRG.42495.1"; exon_number "1"; scaffold_207 StringTie exon 432220 432377 1000 - . gene_id "MSTRG.42501"; transcript_id "MSTRG.42501.1"; exon_number "1"; scaffold_207 StringTie exon 432509 432648 1000 - . gene_id "MSTRG.42501"; transcript_id "MSTRG.42501.1"; exon_number "2"; scaffold_207 StringTie exon 528832 528860 1000 + . gene_id "MSTRG.42523"; transcript_id "MSTRG.42523.1"; exon_number "1"; scaffold_207 StringTie exon 531045 531240 1000 + . gene_id "MSTRG.42523"; transcript_id "MSTRG.42523.1"; exon_number "2"; scaffold_207 StringTie exon 531396 531600 1000 + . gene_id "MSTRG.42523"; transcript_id "MSTRG.42523.1"; exon_number "3"; scaffold_207 StringTie exon 772987 773290 1000 . . gene_id "MSTRG.42551"; transcript_id "MSTRG.42551.1"; exon_number "1"; scaffold_207 StringTie exon 1219611 1219901 1000 . . gene_id "MSTRG.42569"; transcript_id "MSTRG.42569.1"; exon_number "1"; scaffold_2072 StringTie exon 104723 104949 1000 . . gene_id "MSTRG.42615"; transcript_id "MSTRG.42615.1"; exon_number "1"; scaffold_20724 StringTie exon 6753 7015 1000 . . gene_id "MSTRG.42624"; transcript_id "MSTRG.42624.1"; exon_number "1"; scaffold_2074 StringTie exon 36895 37071 1000 + . gene_id "MSTRG.42652"; transcript_id "MSTRG.42652.1"; exon_number "1"; scaffold_2074 StringTie exon 39175 39445 1000 + . gene_id "MSTRG.42652"; transcript_id "MSTRG.42652.1"; exon_number "2"; scaffold_2075 StringTie exon 31632 31671 1000 + . gene_id "MSTRG.42669"; transcript_id "MSTRG.42669.1"; exon_number "1"; scaffold_2075 StringTie exon 31822 31953 1000 + . gene_id "MSTRG.42669"; transcript_id "MSTRG.42669.1"; exon_number "2"; scaffold_2075 StringTie exon 32178 32244 1000 + . gene_id "MSTRG.42669"; transcript_id "MSTRG.42669.1"; exon_number "3"; scaffold_2076 StringTie exon 96422 96882 1000 . . gene_id "MSTRG.42694"; transcript_id "MSTRG.42694.1"; exon_number "1"; scaffold_2077 StringTie exon 24892 25836 1000 . . gene_id "MSTRG.42713"; transcript_id "MSTRG.42713.1"; exon_number "1"; scaffold_20772 StringTie exon 943 1173 1000 + . gene_id "MSTRG.42724"; transcript_id "MSTRG.42724.1"; exon_number "1"; scaffold_20772 StringTie exon 6805 7264 1000 + . gene_id "MSTRG.42724"; transcript_id "MSTRG.42724.1"; exon_number "2"; scaffold_20795 StringTie exon 102 453 1000 . . gene_id "MSTRG.42761"; transcript_id "MSTRG.42761.1"; exon_number "1"; scaffold_208 StringTie exon 13575 13814 1000 . . gene_id "MSTRG.42766"; transcript_id "MSTRG.42766.1"; exon_number "1"; scaffold_208 StringTie exon 191115 191184 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "1"; scaffold_208 StringTie exon 191566 191741 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "2"; scaffold_208 StringTie exon 192478 192580 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "3"; scaffold_208 StringTie exon 192828 193031 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "4"; scaffold_208 StringTie exon 193945 194084 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "5"; scaffold_208 StringTie exon 194201 194312 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "6"; scaffold_208 StringTie exon 194440 194607 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "7"; scaffold_208 StringTie exon 194688 194776 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "8"; scaffold_208 StringTie exon 194865 195061 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "9"; scaffold_208 StringTie exon 195219 195312 1000 + . gene_id "MSTRG.42790"; transcript_id "MSTRG.42790.1"; exon_number "10"; scaffold_208 StringTie exon 209481 209502 1000 - . gene_id "MSTRG.42792"; transcript_id "MSTRG.42792.1"; exon_number "1"; scaffold_208 StringTie exon 213253 213488 1000 - . gene_id "MSTRG.42792"; transcript_id "MSTRG.42792.1"; exon_number "2"; scaffold_208 StringTie exon 352820 353231 1000 + . gene_id "MSTRG.42811"; transcript_id "MSTRG.42811.1"; exon_number "1"; scaffold_208 StringTie exon 399126 399197 1000 + . gene_id "MSTRG.42811"; transcript_id "MSTRG.42811.1"; exon_number "2"; scaffold_208 StringTie exon 494235 494469 1000 . . gene_id "MSTRG.42818"; transcript_id "MSTRG.42818.1"; exon_number "1"; scaffold_208 StringTie exon 612194 612545 1000 . . gene_id "MSTRG.42824"; transcript_id "MSTRG.42824.1"; exon_number "1"; scaffold_208 StringTie exon 614006 614406 1000 + . gene_id "MSTRG.42825"; transcript_id "MSTRG.42825.1"; exon_number "1"; scaffold_208 StringTie exon 614805 614973 1000 + . gene_id "MSTRG.42825"; transcript_id "MSTRG.42825.1"; exon_number "2"; scaffold_208 StringTie exon 615189 615377 1000 + . gene_id "MSTRG.42825"; transcript_id "MSTRG.42825.1"; exon_number "3"; scaffold_208 StringTie exon 615485 615528 1000 + . gene_id "MSTRG.42825"; transcript_id "MSTRG.42825.1"; exon_number "4"; scaffold_208 StringTie exon 786500 786874 1000 . . gene_id "MSTRG.42833"; transcript_id "MSTRG.42833.1"; exon_number "1"; scaffold_208 StringTie exon 803792 803966 1000 - . gene_id "MSTRG.42835"; transcript_id "MSTRG.42835.1"; exon_number "1"; scaffold_208 StringTie exon 809922 810169 1000 - . gene_id "MSTRG.42835"; transcript_id "MSTRG.42835.1"; exon_number "2"; scaffold_208 StringTie exon 1188502 1188993 1000 . . gene_id "MSTRG.42854"; transcript_id "MSTRG.42854.1"; exon_number "1"; scaffold_2081 StringTie exon 54669 55036 1000 . . gene_id "MSTRG.42882"; transcript_id "MSTRG.42882.1"; exon_number "1"; scaffold_2081 StringTie exon 90367 90749 1000 - . gene_id "MSTRG.42890"; transcript_id "MSTRG.42890.1"; exon_number "1"; scaffold_2081 StringTie exon 91205 91348 1000 - . gene_id "MSTRG.42890"; transcript_id "MSTRG.42890.1"; exon_number "2"; scaffold_2081 StringTie exon 101682 101730 1000 - . gene_id "MSTRG.42891"; transcript_id "MSTRG.42891.1"; exon_number "1"; scaffold_2081 StringTie exon 101859 101948 1000 - . gene_id "MSTRG.42891"; transcript_id "MSTRG.42891.1"; exon_number "2"; scaffold_2081 StringTie exon 102102 102156 1000 - . gene_id "MSTRG.42891"; transcript_id "MSTRG.42891.1"; exon_number "3"; scaffold_2081 StringTie exon 102653 102829 1000 - . gene_id "MSTRG.42891"; transcript_id "MSTRG.42891.1"; exon_number "4"; scaffold_20811 StringTie exon 4420 4642 1000 - . gene_id "MSTRG.42896"; transcript_id "MSTRG.42896.1"; exon_number "1"; scaffold_20811 StringTie exon 5672 5769 1000 - . gene_id "MSTRG.42896"; transcript_id "MSTRG.42896.1"; exon_number "2"; scaffold_20817 StringTie exon 157 677 1000 . . gene_id "MSTRG.42903"; transcript_id "MSTRG.42903.1"; exon_number "1"; scaffold_20818 StringTie exon 1 323 1000 . . gene_id "MSTRG.42904"; transcript_id "MSTRG.42904.1"; exon_number "1"; scaffold_20820 StringTie exon 882 1143 1000 . . gene_id "MSTRG.42916"; transcript_id "MSTRG.42916.1"; exon_number "1"; scaffold_2084 StringTie exon 6673 7917 1000 . . gene_id "MSTRG.42935"; transcript_id "MSTRG.42935.1"; exon_number "1"; scaffold_2085 StringTie exon 94888 95133 1000 . . gene_id "MSTRG.42967"; transcript_id "MSTRG.42967.1"; exon_number "1"; scaffold_2086 StringTie exon 30935 31182 1000 . . gene_id "MSTRG.42977"; transcript_id "MSTRG.42977.1"; exon_number "1"; scaffold_20865 StringTie exon 2132 2382 1000 . . gene_id "MSTRG.42985"; transcript_id "MSTRG.42985.1"; exon_number "1"; scaffold_20876 StringTie exon 5484 5701 1000 + . gene_id "MSTRG.42999"; transcript_id "MSTRG.42999.1"; exon_number "1"; scaffold_20877 StringTie exon 6379 6633 1000 . . gene_id "MSTRG.43001"; transcript_id "MSTRG.43001.1"; exon_number "1"; scaffold_2088 StringTie exon 95896 96238 1000 . . gene_id "MSTRG.43008"; transcript_id "MSTRG.43008.1"; exon_number "1"; scaffold_20880 StringTie exon 4123 4760 1000 . . gene_id "MSTRG.43010"; transcript_id "MSTRG.43010.1"; exon_number "1"; scaffold_20885 StringTie exon 2762 3061 1000 . . gene_id "MSTRG.43016"; transcript_id "MSTRG.43016.1"; exon_number "1"; scaffold_20889 StringTie exon 813 1132 1000 . . gene_id "MSTRG.43019"; transcript_id "MSTRG.43019.1"; exon_number "1"; scaffold_209 StringTie exon 302118 302446 1000 + . gene_id "MSTRG.43064"; transcript_id "MSTRG.43064.1"; exon_number "1"; scaffold_209 StringTie exon 303315 303470 1000 + . gene_id "MSTRG.43064"; transcript_id "MSTRG.43064.1"; exon_number "2"; scaffold_209 StringTie exon 304108 305057 1000 + . gene_id "MSTRG.43064"; transcript_id "MSTRG.43064.1"; exon_number "3"; scaffold_209 StringTie exon 319281 319652 1000 . . gene_id "MSTRG.43071"; transcript_id "MSTRG.43071.1"; exon_number "1"; scaffold_209 StringTie exon 403981 404217 1000 . . gene_id "MSTRG.43080"; transcript_id "MSTRG.43080.1"; exon_number "1"; scaffold_209 StringTie exon 451404 451635 1000 . . gene_id "MSTRG.43084"; transcript_id "MSTRG.43084.1"; exon_number "1"; scaffold_209 StringTie exon 794431 794701 1000 . . gene_id "MSTRG.43113"; transcript_id "MSTRG.43113.1"; exon_number "1"; scaffold_209 StringTie exon 907755 907981 1000 . . gene_id "MSTRG.43122"; transcript_id "MSTRG.43122.1"; exon_number "1"; scaffold_209 StringTie exon 1140256 1140573 1000 . . gene_id "MSTRG.43134"; transcript_id "MSTRG.43134.1"; exon_number "1"; scaffold_209 StringTie exon 1218706 1218917 1000 . . gene_id "MSTRG.43144"; transcript_id "MSTRG.43144.1"; exon_number "1"; scaffold_2091 StringTie exon 117920 118573 1000 . . gene_id "MSTRG.43169"; transcript_id "MSTRG.43169.1"; exon_number "1"; scaffold_2092 StringTie exon 1591 1857 1000 . . gene_id "MSTRG.43175"; transcript_id "MSTRG.43175.1"; exon_number "1"; scaffold_2093 StringTie exon 62364 62574 1000 . . gene_id "MSTRG.43190"; transcript_id "MSTRG.43190.1"; exon_number "1"; scaffold_2093 StringTie exon 63006 63434 1000 - . gene_id "MSTRG.43191"; transcript_id "MSTRG.43191.1"; exon_number "1"; scaffold_2093 StringTie exon 66732 66952 1000 . . gene_id "MSTRG.43193"; transcript_id "MSTRG.43193.1"; exon_number "1"; scaffold_2094 StringTie exon 63704 64038 1000 . . gene_id "MSTRG.43213"; transcript_id "MSTRG.43213.1"; exon_number "1"; scaffold_2099 StringTie exon 121124 121325 1000 . . gene_id "MSTRG.43304"; transcript_id "MSTRG.43304.1"; exon_number "1"; scaffold_21 StringTie exon 781228 781290 1000 + . gene_id "MSTRG.43368"; transcript_id "MSTRG.43368.1"; exon_number "1"; scaffold_21 StringTie exon 785839 785968 1000 + . gene_id "MSTRG.43368"; transcript_id "MSTRG.43368.1"; exon_number "2"; scaffold_21 StringTie exon 786185 786298 1000 + . gene_id "MSTRG.43368"; transcript_id "MSTRG.43368.1"; exon_number "3"; scaffold_21 StringTie exon 786630 786679 1000 + . gene_id "MSTRG.43368"; transcript_id "MSTRG.43368.1"; exon_number "4"; scaffold_21 StringTie exon 1040538 1041089 1000 . . gene_id "MSTRG.43398"; transcript_id "MSTRG.43398.1"; exon_number "1"; scaffold_21 StringTie exon 1361310 1361528 1000 . . gene_id "MSTRG.43426"; transcript_id "MSTRG.43426.1"; exon_number "1"; scaffold_21 StringTie exon 1446121 1446367 1000 . . gene_id "MSTRG.43429"; transcript_id "MSTRG.43429.1"; exon_number "1"; scaffold_21 StringTie exon 1694640 1694928 1000 . . gene_id "MSTRG.43448"; transcript_id "MSTRG.43448.1"; exon_number "1"; scaffold_21 StringTie exon 1699788 1699981 1000 - . gene_id "MSTRG.43451"; transcript_id "MSTRG.43451.1"; exon_number "1"; scaffold_21 StringTie exon 1700175 1700230 1000 - . gene_id "MSTRG.43451"; transcript_id "MSTRG.43451.1"; exon_number "2"; scaffold_21 StringTie exon 1811196 1811495 1000 . . gene_id "MSTRG.43460"; transcript_id "MSTRG.43460.1"; exon_number "1"; scaffold_21 StringTie exon 2199965 2200480 1000 + . gene_id "MSTRG.43504"; transcript_id "MSTRG.43504.2"; exon_number "1"; scaffold_21 StringTie exon 2204599 2204859 1000 + . gene_id "MSTRG.43504"; transcript_id "MSTRG.43504.2"; exon_number "2"; scaffold_21 StringTie exon 2205030 2205308 1000 + . gene_id "MSTRG.43504"; transcript_id "MSTRG.43504.2"; exon_number "3"; scaffold_21 StringTie exon 2205510 2205572 1000 + . gene_id "MSTRG.43504"; transcript_id "MSTRG.43504.2"; exon_number "4"; scaffold_21 StringTie exon 2210150 2210290 1000 + . gene_id "MSTRG.43504"; transcript_id "MSTRG.43504.2"; exon_number "5"; scaffold_21 StringTie exon 2210582 2211712 1000 . . gene_id "MSTRG.43505"; transcript_id "MSTRG.43505.1"; exon_number "1"; scaffold_21 StringTie exon 2330198 2330619 1000 . . gene_id "MSTRG.43512"; transcript_id "MSTRG.43512.1"; exon_number "1"; scaffold_21 StringTie exon 2360559 2361000 1000 . . gene_id "MSTRG.43519"; transcript_id "MSTRG.43519.1"; exon_number "1"; scaffold_21 StringTie exon 2470030 2470237 1000 . . gene_id "MSTRG.43536"; transcript_id "MSTRG.43536.1"; exon_number "1"; scaffold_21 StringTie exon 2608726 2608751 1000 + . gene_id "MSTRG.43548"; transcript_id "MSTRG.43548.1"; exon_number "1"; scaffold_21 StringTie exon 2613413 2613564 1000 + . gene_id "MSTRG.43548"; transcript_id "MSTRG.43548.1"; exon_number "2"; scaffold_21 StringTie exon 2613767 2613820 1000 + . gene_id "MSTRG.43548"; transcript_id "MSTRG.43548.1"; exon_number "3"; scaffold_21 StringTie exon 2625490 2625831 1000 . . gene_id "MSTRG.43555"; transcript_id "MSTRG.43555.1"; exon_number "1"; scaffold_210 StringTie exon 40586 40821 1000 . . gene_id "MSTRG.43565"; transcript_id "MSTRG.43565.1"; exon_number "1"; scaffold_210 StringTie exon 253758 253774 1000 + . gene_id "MSTRG.43575"; transcript_id "MSTRG.43575.1"; exon_number "1"; scaffold_210 StringTie exon 254097 254155 1000 + . gene_id "MSTRG.43575"; transcript_id "MSTRG.43575.1"; exon_number "2"; scaffold_210 StringTie exon 254365 254394 1000 + . gene_id "MSTRG.43575"; transcript_id "MSTRG.43575.1"; exon_number "3"; scaffold_210 StringTie exon 254547 254753 1000 + . gene_id "MSTRG.43575"; transcript_id "MSTRG.43575.1"; exon_number "4"; scaffold_210 StringTie exon 359122 359475 1000 . . gene_id "MSTRG.43588"; transcript_id "MSTRG.43588.1"; exon_number "1"; scaffold_210 StringTie exon 409072 409165 1000 + . gene_id "MSTRG.43594"; transcript_id "MSTRG.43594.1"; exon_number "1"; scaffold_210 StringTie exon 409548 409695 1000 + . gene_id "MSTRG.43594"; transcript_id "MSTRG.43594.1"; exon_number "2"; scaffold_210 StringTie exon 410231 410536 1000 + . gene_id "MSTRG.43594"; transcript_id "MSTRG.43594.1"; exon_number "3"; scaffold_210 StringTie exon 441582 441782 1000 . . gene_id "MSTRG.43599"; transcript_id "MSTRG.43599.1"; exon_number "1"; scaffold_210 StringTie exon 480335 480374 1000 + . gene_id "MSTRG.43603"; transcript_id "MSTRG.43603.2"; exon_number "1"; scaffold_210 StringTie exon 482218 482371 1000 + . gene_id "MSTRG.43603"; transcript_id "MSTRG.43603.2"; exon_number "2"; scaffold_210 StringTie exon 482539 482740 1000 + . gene_id "MSTRG.43603"; transcript_id "MSTRG.43603.2"; exon_number "3"; scaffold_210 StringTie exon 483002 483166 1000 + . gene_id "MSTRG.43603"; transcript_id "MSTRG.43603.2"; exon_number "4"; scaffold_210 StringTie exon 486707 486931 1000 + . gene_id "MSTRG.43603"; transcript_id "MSTRG.43603.2"; exon_number "5"; scaffold_210 StringTie exon 511023 511643 1000 + . gene_id "MSTRG.43609"; transcript_id "MSTRG.43609.1"; exon_number "1"; scaffold_210 StringTie exon 511821 511966 1000 + . gene_id "MSTRG.43609"; transcript_id "MSTRG.43609.1"; exon_number "2"; scaffold_210 StringTie exon 512575 512680 1000 + . gene_id "MSTRG.43609"; transcript_id "MSTRG.43609.1"; exon_number "3"; scaffold_210 StringTie exon 513305 513481 1000 + . gene_id "MSTRG.43609"; transcript_id "MSTRG.43609.1"; exon_number "4"; scaffold_210 StringTie exon 513675 514111 1000 + . gene_id "MSTRG.43609"; transcript_id "MSTRG.43609.1"; exon_number "5"; scaffold_210 StringTie exon 516120 516369 1000 . . gene_id "MSTRG.43610"; transcript_id "MSTRG.43610.1"; exon_number "1"; scaffold_210 StringTie exon 573072 573151 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "1"; scaffold_210 StringTie exon 573285 573529 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "2"; scaffold_210 StringTie exon 573620 573710 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "3"; scaffold_210 StringTie exon 573831 573939 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "4"; scaffold_210 StringTie exon 574077 574188 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "5"; scaffold_210 StringTie exon 575622 575736 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "6"; scaffold_210 StringTie exon 575959 576147 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "7"; scaffold_210 StringTie exon 576375 576839 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "8"; scaffold_210 StringTie exon 577091 577187 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "9"; scaffold_210 StringTie exon 577706 577877 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "10"; scaffold_210 StringTie exon 581381 581508 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.3"; exon_number "11"; scaffold_210 StringTie exon 576376 576533 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.5"; exon_number "1"; scaffold_210 StringTie exon 576736 576839 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.5"; exon_number "2"; scaffold_210 StringTie exon 577091 577187 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.5"; exon_number "3"; scaffold_210 StringTie exon 577706 577877 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.5"; exon_number "4"; scaffold_210 StringTie exon 581381 581460 1000 - . gene_id "MSTRG.43623"; transcript_id "MSTRG.43623.5"; exon_number "5"; scaffold_210 StringTie exon 651868 652369 1000 . . gene_id "MSTRG.43636"; transcript_id "MSTRG.43636.1"; exon_number "1"; scaffold_210 StringTie exon 849399 849629 1000 . . gene_id "MSTRG.43647"; transcript_id "MSTRG.43647.1"; exon_number "1"; scaffold_210 StringTie exon 985675 985902 1000 . . gene_id "MSTRG.43658"; transcript_id "MSTRG.43658.1"; exon_number "1"; scaffold_210 StringTie exon 1094170 1094210 1000 - . gene_id "MSTRG.43667"; transcript_id "MSTRG.43667.1"; exon_number "1"; scaffold_210 StringTie exon 1094413 1094537 1000 - . gene_id "MSTRG.43667"; transcript_id "MSTRG.43667.1"; exon_number "2"; scaffold_210 StringTie exon 1094624 1094721 1000 - . gene_id "MSTRG.43667"; transcript_id "MSTRG.43667.1"; exon_number "3"; scaffold_210 StringTie exon 1094859 1094982 1000 - . gene_id "MSTRG.43667"; transcript_id "MSTRG.43667.1"; exon_number "4"; scaffold_210 StringTie exon 1095920 1095936 1000 - . gene_id "MSTRG.43667"; transcript_id "MSTRG.43667.1"; exon_number "5"; scaffold_2100 StringTie exon 124516 124874 1000 . . gene_id "MSTRG.43686"; transcript_id "MSTRG.43686.1"; exon_number "1"; scaffold_21005 StringTie exon 64 640 1000 + . gene_id "MSTRG.43694"; transcript_id "MSTRG.43694.1"; exon_number "1"; scaffold_21005 StringTie exon 943 1081 1000 + . gene_id "MSTRG.43694"; transcript_id "MSTRG.43694.1"; exon_number "2"; scaffold_2101 StringTie exon 79040 79491 1000 . . gene_id "MSTRG.43711"; transcript_id "MSTRG.43711.1"; exon_number "1"; scaffold_2104 StringTie exon 27611 28068 1000 - . gene_id "MSTRG.43759"; transcript_id "MSTRG.43759.2"; exon_number "1"; scaffold_2104 StringTie exon 28706 28840 1000 - . gene_id "MSTRG.43759"; transcript_id "MSTRG.43759.2"; exon_number "2"; scaffold_2104 StringTie exon 29126 29309 1000 - . gene_id "MSTRG.43759"; transcript_id "MSTRG.43759.2"; exon_number "3"; scaffold_2104 StringTie exon 36498 36633 1000 - . gene_id "MSTRG.43759"; transcript_id "MSTRG.43759.2"; exon_number "4"; scaffold_2104 StringTie exon 37017 37132 1000 - . gene_id "MSTRG.43759"; transcript_id "MSTRG.43759.2"; exon_number "5"; scaffold_2104 StringTie exon 37325 37515 1000 - . gene_id "MSTRG.43759"; transcript_id "MSTRG.43759.2"; exon_number "6"; scaffold_21053 StringTie exon 4419 4692 1000 . . gene_id "MSTRG.43787"; transcript_id "MSTRG.43787.1"; exon_number "1"; scaffold_211 StringTie exon 641610 642268 1000 - . gene_id "MSTRG.43902"; transcript_id "MSTRG.43902.1"; exon_number "1"; scaffold_211 StringTie exon 642419 642464 1000 - . gene_id "MSTRG.43902"; transcript_id "MSTRG.43902.1"; exon_number "2"; scaffold_211 StringTie exon 642572 642774 1000 - . gene_id "MSTRG.43902"; transcript_id "MSTRG.43902.1"; exon_number "3"; scaffold_211 StringTie exon 643900 644003 1000 - . gene_id "MSTRG.43902"; transcript_id "MSTRG.43902.1"; exon_number "4"; scaffold_211 StringTie exon 644122 644249 1000 - . gene_id "MSTRG.43902"; transcript_id "MSTRG.43902.1"; exon_number "5"; scaffold_211 StringTie exon 645985 646024 1000 - . gene_id "MSTRG.43902"; transcript_id "MSTRG.43902.1"; exon_number "6"; scaffold_211 StringTie exon 646136 646183 1000 - . gene_id "MSTRG.43902"; transcript_id "MSTRG.43902.1"; exon_number "7"; scaffold_211 StringTie exon 646572 646750 1000 - . gene_id "MSTRG.43902"; transcript_id "MSTRG.43902.1"; exon_number "8"; scaffold_211 StringTie exon 734966 735323 1000 . . gene_id "MSTRG.43909"; transcript_id "MSTRG.43909.1"; exon_number "1"; scaffold_211 StringTie exon 747359 747690 1000 . . gene_id "MSTRG.43910"; transcript_id "MSTRG.43910.1"; exon_number "1"; scaffold_211 StringTie exon 812222 812513 1000 . . gene_id "MSTRG.43914"; transcript_id "MSTRG.43914.1"; exon_number "1"; scaffold_211 StringTie exon 857035 857251 1000 . . gene_id "MSTRG.43915"; transcript_id "MSTRG.43915.1"; exon_number "1"; scaffold_211 StringTie exon 979788 980116 1000 . . gene_id "MSTRG.43923"; transcript_id "MSTRG.43923.1"; exon_number "1"; scaffold_211 StringTie exon 1036984 1037217 1000 . . gene_id "MSTRG.43929"; transcript_id "MSTRG.43929.1"; exon_number "1"; scaffold_21103 StringTie exon 5254 5571 1000 . . gene_id "MSTRG.43976"; transcript_id "MSTRG.43976.1"; exon_number "1"; scaffold_2113 StringTie exon 105890 106145 1000 . . gene_id "MSTRG.44028"; transcript_id "MSTRG.44028.1"; exon_number "1"; scaffold_21133 StringTie exon 4961 6328 1000 . . gene_id "MSTRG.44032"; transcript_id "MSTRG.44032.1"; exon_number "1"; scaffold_2114 StringTie exon 82731 83019 1000 . . gene_id "MSTRG.44040"; transcript_id "MSTRG.44040.1"; exon_number "1"; scaffold_2119 StringTie exon 14083 14351 1000 - . gene_id "MSTRG.44107"; transcript_id "MSTRG.44107.1"; exon_number "1"; scaffold_21190 StringTie exon 6351 6866 1000 . . gene_id "MSTRG.44113"; transcript_id "MSTRG.44113.1"; exon_number "1"; scaffold_21192 StringTie exon 2963 3224 1000 . . gene_id "MSTRG.44116"; transcript_id "MSTRG.44116.1"; exon_number "1"; scaffold_21194 StringTie exon 1 259 1000 . . gene_id "MSTRG.44119"; transcript_id "MSTRG.44119.1"; exon_number "1"; scaffold_212 StringTie exon 67073 67307 1000 - . gene_id "MSTRG.44130"; transcript_id "MSTRG.44130.1"; exon_number "1"; scaffold_212 StringTie exon 216397 216787 1000 + . gene_id "MSTRG.44145"; transcript_id "MSTRG.44145.1"; exon_number "1"; scaffold_212 StringTie exon 217002 217214 1000 + . gene_id "MSTRG.44145"; transcript_id "MSTRG.44145.1"; exon_number "2"; scaffold_212 StringTie exon 684499 684715 1000 . . gene_id "MSTRG.44183"; transcript_id "MSTRG.44183.1"; exon_number "1"; scaffold_212 StringTie exon 716449 716533 1000 - . gene_id "MSTRG.44191"; transcript_id "MSTRG.44191.1"; exon_number "1"; scaffold_212 StringTie exon 718708 718869 1000 - . gene_id "MSTRG.44191"; transcript_id "MSTRG.44191.1"; exon_number "2"; scaffold_212 StringTie exon 720921 721011 1000 - . gene_id "MSTRG.44191"; transcript_id "MSTRG.44191.1"; exon_number "3"; scaffold_212 StringTie exon 721697 721744 1000 - . gene_id "MSTRG.44191"; transcript_id "MSTRG.44191.1"; exon_number "4"; scaffold_212 StringTie exon 1181242 1181510 1000 . . gene_id "MSTRG.44220"; transcript_id "MSTRG.44220.1"; exon_number "1"; scaffold_212 StringTie exon 1199894 1200308 1000 . . gene_id "MSTRG.44221"; transcript_id "MSTRG.44221.1"; exon_number "1"; scaffold_2121 StringTie exon 75480 75746 1000 . . gene_id "MSTRG.44246"; transcript_id "MSTRG.44246.1"; exon_number "1"; scaffold_21249 StringTie exon 1797 2321 1000 . . gene_id "MSTRG.44313"; transcript_id "MSTRG.44313.1"; exon_number "1"; scaffold_2125 StringTie exon 35755 36003 1000 . . gene_id "MSTRG.44317"; transcript_id "MSTRG.44317.1"; exon_number "1"; scaffold_2125 StringTie exon 54725 55329 1000 . . gene_id "MSTRG.44319"; transcript_id "MSTRG.44319.1"; exon_number "1"; scaffold_2126 StringTie exon 37411 37906 1000 - . gene_id "MSTRG.44332"; transcript_id "MSTRG.44332.1"; exon_number "1"; scaffold_2127 StringTie exon 61774 62487 1000 . . gene_id "MSTRG.44347"; transcript_id "MSTRG.44347.1"; exon_number "1"; scaffold_2127 StringTie exon 67519 68144 1000 . . gene_id "MSTRG.44348"; transcript_id "MSTRG.44348.1"; exon_number "1"; scaffold_2127 StringTie exon 95013 95253 1000 . . gene_id "MSTRG.44350"; transcript_id "MSTRG.44350.1"; exon_number "1"; scaffold_2128 StringTie exon 26072 26369 1000 . . gene_id "MSTRG.44363"; transcript_id "MSTRG.44363.1"; exon_number "1"; scaffold_2128 StringTie exon 106712 106918 1000 . . gene_id "MSTRG.44371"; transcript_id "MSTRG.44371.1"; exon_number "1"; scaffold_21282 StringTie exon 109 1306 1000 . . gene_id "MSTRG.44372"; transcript_id "MSTRG.44372.1"; exon_number "1"; scaffold_2129 StringTie exon 14765 15003 1000 . . gene_id "MSTRG.44379"; transcript_id "MSTRG.44379.1"; exon_number "1"; scaffold_21296 StringTie exon 6586 6849 1000 . . gene_id "MSTRG.44395"; transcript_id "MSTRG.44395.1"; exon_number "1"; scaffold_213 StringTie exon 405772 405999 1000 . . gene_id "MSTRG.44427"; transcript_id "MSTRG.44427.1"; exon_number "1"; scaffold_213 StringTie exon 474086 474615 1000 . . gene_id "MSTRG.44435"; transcript_id "MSTRG.44435.1"; exon_number "1"; scaffold_213 StringTie exon 1183027 1183395 1000 . . gene_id "MSTRG.44479"; transcript_id "MSTRG.44479.1"; exon_number "1"; scaffold_21302 StringTie exon 3322 3405 1000 - . gene_id "MSTRG.44490"; transcript_id "MSTRG.44490.1"; exon_number "1"; scaffold_21302 StringTie exon 7077 7187 1000 - . gene_id "MSTRG.44490"; transcript_id "MSTRG.44490.1"; exon_number "2"; scaffold_21302 StringTie exon 7382 7533 1000 - . gene_id "MSTRG.44490"; transcript_id "MSTRG.44490.1"; exon_number "3"; scaffold_2131 StringTie exon 22671 22928 1000 . . gene_id "MSTRG.44498"; transcript_id "MSTRG.44498.1"; exon_number "1"; scaffold_21327 StringTie exon 5888 7022 1000 - . gene_id "MSTRG.44519"; transcript_id "MSTRG.44519.1"; exon_number "1"; scaffold_2133 StringTie exon 75761 75996 1000 . . gene_id "MSTRG.44528"; transcript_id "MSTRG.44528.1"; exon_number "1"; scaffold_2135 StringTie exon 45850 46080 1000 . . gene_id "MSTRG.44560"; transcript_id "MSTRG.44560.1"; exon_number "1"; scaffold_21355 StringTie exon 6240 6412 1000 - . gene_id "MSTRG.44569"; transcript_id "MSTRG.44569.1"; exon_number "1"; scaffold_21355 StringTie exon 6543 6604 1000 - . gene_id "MSTRG.44569"; transcript_id "MSTRG.44569.1"; exon_number "2"; scaffold_2136 StringTie exon 115520 115744 1000 . . gene_id "MSTRG.44583"; transcript_id "MSTRG.44583.1"; exon_number "1"; scaffold_21360 StringTie exon 541 762 1000 . . gene_id "MSTRG.44584"; transcript_id "MSTRG.44584.1"; exon_number "1"; scaffold_21372 StringTie exon 3992 4230 1000 . . gene_id "MSTRG.44590"; transcript_id "MSTRG.44590.1"; exon_number "1"; scaffold_2138 StringTie exon 56088 56324 1000 . . gene_id "MSTRG.44598"; transcript_id "MSTRG.44598.1"; exon_number "1"; scaffold_214 StringTie exon 98696 98928 1000 . . gene_id "MSTRG.44637"; transcript_id "MSTRG.44637.1"; exon_number "1"; scaffold_214 StringTie exon 584858 585111 1000 . . gene_id "MSTRG.44667"; transcript_id "MSTRG.44667.1"; exon_number "1"; scaffold_214 StringTie exon 619593 619868 1000 . . gene_id "MSTRG.44670"; transcript_id "MSTRG.44670.1"; exon_number "1"; scaffold_214 StringTie exon 636636 636852 1000 . . gene_id "MSTRG.44671"; transcript_id "MSTRG.44671.1"; exon_number "1"; scaffold_214 StringTie exon 878394 878612 1000 . . gene_id "MSTRG.44694"; transcript_id "MSTRG.44694.1"; exon_number "1"; scaffold_214 StringTie exon 988147 988409 1000 . . gene_id "MSTRG.44701"; transcript_id "MSTRG.44701.1"; exon_number "1"; scaffold_214 StringTie exon 1115860 1116150 1000 . . gene_id "MSTRG.44715"; transcript_id "MSTRG.44715.1"; exon_number "1"; scaffold_21400 StringTie exon 575 783 1000 . . gene_id "MSTRG.44735"; transcript_id "MSTRG.44735.1"; exon_number "1"; scaffold_2141 StringTie exon 109660 109907 1000 . . gene_id "MSTRG.44749"; transcript_id "MSTRG.44749.1"; exon_number "1"; scaffold_2144 StringTie exon 26087 26443 1000 + . gene_id "MSTRG.44789"; transcript_id "MSTRG.44789.1"; exon_number "1"; scaffold_2144 StringTie exon 26538 26609 1000 + . gene_id "MSTRG.44789"; transcript_id "MSTRG.44789.1"; exon_number "2"; scaffold_2144 StringTie exon 26734 27077 1000 + . gene_id "MSTRG.44789"; transcript_id "MSTRG.44789.1"; exon_number "3"; scaffold_2145 StringTie exon 4005 4223 1000 . . gene_id "MSTRG.44805"; transcript_id "MSTRG.44805.1"; exon_number "1"; scaffold_2146 StringTie exon 46725 46989 1000 . . gene_id "MSTRG.44816"; transcript_id "MSTRG.44816.1"; exon_number "1"; scaffold_2146 StringTie exon 83353 83399 1000 - . gene_id "MSTRG.44818"; transcript_id "MSTRG.44818.1"; exon_number "1"; scaffold_2146 StringTie exon 83809 83938 1000 - . gene_id "MSTRG.44818"; transcript_id "MSTRG.44818.1"; exon_number "2"; scaffold_2146 StringTie exon 85221 85266 1000 - . gene_id "MSTRG.44818"; transcript_id "MSTRG.44818.1"; exon_number "3"; scaffold_21464 StringTie exon 5936 6437 1000 . . gene_id "MSTRG.44828"; transcript_id "MSTRG.44828.1"; exon_number "1"; scaffold_2147 StringTie exon 104016 104230 1000 . . gene_id "MSTRG.44839"; transcript_id "MSTRG.44839.1"; exon_number "1"; scaffold_2148 StringTie exon 46062 46285 1000 . . gene_id "MSTRG.44854"; transcript_id "MSTRG.44854.1"; exon_number "1"; scaffold_2148 StringTie exon 85855 86109 1000 . . gene_id "MSTRG.44860"; transcript_id "MSTRG.44860.1"; exon_number "1"; scaffold_2148 StringTie exon 98562 98860 1000 . . gene_id "MSTRG.44862"; transcript_id "MSTRG.44862.1"; exon_number "1"; scaffold_2149 StringTie exon 115947 116598 1000 . . gene_id "MSTRG.44878"; transcript_id "MSTRG.44878.1"; exon_number "1"; scaffold_215 StringTie exon 91040 91185 1000 + . gene_id "MSTRG.44893"; transcript_id "MSTRG.44893.1"; exon_number "1"; scaffold_215 StringTie exon 92368 92468 1000 + . gene_id "MSTRG.44893"; transcript_id "MSTRG.44893.1"; exon_number "2"; scaffold_215 StringTie exon 123095 123328 1000 . . gene_id "MSTRG.44900"; transcript_id "MSTRG.44900.1"; exon_number "1"; scaffold_215 StringTie exon 372343 372518 1000 + . gene_id "MSTRG.44911"; transcript_id "MSTRG.44911.1"; exon_number "1"; scaffold_215 StringTie exon 372815 372893 1000 + . gene_id "MSTRG.44911"; transcript_id "MSTRG.44911.1"; exon_number "2"; scaffold_215 StringTie exon 373093 373245 1000 + . gene_id "MSTRG.44911"; transcript_id "MSTRG.44911.1"; exon_number "3"; scaffold_215 StringTie exon 373864 373971 1000 + . gene_id "MSTRG.44911"; transcript_id "MSTRG.44911.1"; exon_number "4"; scaffold_215 StringTie exon 376638 376732 1000 + . gene_id "MSTRG.44911"; transcript_id "MSTRG.44911.1"; exon_number "5"; scaffold_215 StringTie exon 385315 385720 1000 + . gene_id "MSTRG.44911"; transcript_id "MSTRG.44911.1"; exon_number "6"; scaffold_215 StringTie exon 456423 456665 1000 . . gene_id "MSTRG.44915"; transcript_id "MSTRG.44915.1"; exon_number "1"; scaffold_2150 StringTie exon 47091 47307 1000 . . gene_id "MSTRG.44958"; transcript_id "MSTRG.44958.1"; exon_number "1"; scaffold_2150 StringTie exon 58298 58514 1000 . . gene_id "MSTRG.44959"; transcript_id "MSTRG.44959.1"; exon_number "1"; scaffold_21500 StringTie exon 987 1009 1000 - . gene_id "MSTRG.44966"; transcript_id "MSTRG.44966.1"; exon_number "1"; scaffold_21500 StringTie exon 1341 1417 1000 - . gene_id "MSTRG.44966"; transcript_id "MSTRG.44966.1"; exon_number "2"; scaffold_21500 StringTie exon 7123 7235 1000 - . gene_id "MSTRG.44966"; transcript_id "MSTRG.44966.1"; exon_number "3"; scaffold_21501 StringTie exon 3708 3946 1000 - . gene_id "MSTRG.44968"; transcript_id "MSTRG.44968.1"; exon_number "1"; scaffold_21501 StringTie exon 6786 6973 1000 - . gene_id "MSTRG.44968"; transcript_id "MSTRG.44968.1"; exon_number "2"; scaffold_2151 StringTie exon 99094 99847 1000 . . gene_id "MSTRG.44981"; transcript_id "MSTRG.44981.1"; exon_number "1"; scaffold_2151 StringTie exon 115497 115725 1000 . . gene_id "MSTRG.44985"; transcript_id "MSTRG.44985.1"; exon_number "1"; scaffold_2152 StringTie exon 85327 85599 1000 . . gene_id "MSTRG.44995"; transcript_id "MSTRG.44995.1"; exon_number "1"; scaffold_21522 StringTie exon 4296 4547 1000 . . gene_id "MSTRG.44998"; transcript_id "MSTRG.44998.1"; exon_number "1"; scaffold_2153 StringTie exon 75228 75464 1000 . . gene_id "MSTRG.45015"; transcript_id "MSTRG.45015.1"; exon_number "1"; scaffold_21533 StringTie exon 5877 6047 1000 - . gene_id "MSTRG.45022"; transcript_id "MSTRG.45022.1"; exon_number "1"; scaffold_21533 StringTie exon 6178 6356 1000 - . gene_id "MSTRG.45022"; transcript_id "MSTRG.45022.1"; exon_number "2"; scaffold_2155 StringTie exon 92923 93172 1000 . . gene_id "MSTRG.45042"; transcript_id "MSTRG.45042.1"; exon_number "1"; scaffold_21567 StringTie exon 3885 4203 1000 . . gene_id "MSTRG.45065"; transcript_id "MSTRG.45065.1"; exon_number "1"; scaffold_2157 StringTie exon 37238 37485 1000 . . gene_id "MSTRG.45071"; transcript_id "MSTRG.45071.1"; exon_number "1"; scaffold_2159 StringTie exon 38970 39350 1000 . . gene_id "MSTRG.45093"; transcript_id "MSTRG.45093.1"; exon_number "1"; scaffold_216 StringTie exon 80913 81144 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "1"; scaffold_216 StringTie exon 81342 81397 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "2"; scaffold_216 StringTie exon 81756 81924 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "3"; scaffold_216 StringTie exon 82095 82171 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "4"; scaffold_216 StringTie exon 84015 84182 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "5"; scaffold_216 StringTie exon 84361 84564 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "6"; scaffold_216 StringTie exon 87064 87210 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "7"; scaffold_216 StringTie exon 89556 89742 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "8"; scaffold_216 StringTie exon 90883 90981 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "9"; scaffold_216 StringTie exon 91747 91778 1000 - . gene_id "MSTRG.45110"; transcript_id "MSTRG.45110.1"; exon_number "10"; scaffold_216 StringTie exon 197101 197660 1000 - . gene_id "MSTRG.45113"; transcript_id "MSTRG.45113.2"; exon_number "1"; scaffold_216 StringTie exon 198062 198130 1000 - . gene_id "MSTRG.45113"; transcript_id "MSTRG.45113.2"; exon_number "2"; scaffold_216 StringTie exon 198527 198915 1000 - . gene_id "MSTRG.45113"; transcript_id "MSTRG.45113.2"; exon_number "3"; scaffold_216 StringTie exon 301926 302128 1000 . . gene_id "MSTRG.45130"; transcript_id "MSTRG.45130.1"; exon_number "1"; scaffold_216 StringTie exon 553356 553699 1000 . . gene_id "MSTRG.45148"; transcript_id "MSTRG.45148.1"; exon_number "1"; scaffold_216 StringTie exon 840497 841113 1000 + . gene_id "MSTRG.45160"; transcript_id "MSTRG.45160.1"; exon_number "1"; scaffold_2160 StringTie exon 114644 114843 1000 . . gene_id "MSTRG.45198"; transcript_id "MSTRG.45198.1"; exon_number "1"; scaffold_2161 StringTie exon 5244 5503 1000 . . gene_id "MSTRG.45206"; transcript_id "MSTRG.45206.1"; exon_number "1"; scaffold_2161 StringTie exon 10014 11113 1000 . . gene_id "MSTRG.45207"; transcript_id "MSTRG.45207.1"; exon_number "1"; scaffold_2161 StringTie exon 84191 84332 1000 + . gene_id "MSTRG.45220"; transcript_id "MSTRG.45220.1"; exon_number "1"; scaffold_2161 StringTie exon 86242 86478 1000 + . gene_id "MSTRG.45220"; transcript_id "MSTRG.45220.1"; exon_number "2"; scaffold_2161 StringTie exon 86617 86745 1000 + . gene_id "MSTRG.45220"; transcript_id "MSTRG.45220.1"; exon_number "3"; scaffold_2161 StringTie exon 87364 87567 1000 + . gene_id "MSTRG.45220"; transcript_id "MSTRG.45220.1"; exon_number "4"; scaffold_2161 StringTie exon 87844 88083 1000 + . gene_id "MSTRG.45220"; transcript_id "MSTRG.45220.1"; exon_number "5"; scaffold_2161 StringTie exon 91327 93323 1000 . . gene_id "MSTRG.45221"; transcript_id "MSTRG.45221.1"; exon_number "1"; scaffold_2161 StringTie exon 103934 104013 1000 + . gene_id "MSTRG.45225"; transcript_id "MSTRG.45225.1"; exon_number "1"; scaffold_2161 StringTie exon 104488 104556 1000 + . gene_id "MSTRG.45225"; transcript_id "MSTRG.45225.1"; exon_number "2"; scaffold_2161 StringTie exon 104763 104866 1000 + . gene_id "MSTRG.45225"; transcript_id "MSTRG.45225.1"; exon_number "3"; scaffold_2161 StringTie exon 104999 105115 1000 + . gene_id "MSTRG.45225"; transcript_id "MSTRG.45225.1"; exon_number "4"; scaffold_2161 StringTie exon 105346 105474 1000 + . gene_id "MSTRG.45225"; transcript_id "MSTRG.45225.1"; exon_number "5"; scaffold_2161 StringTie exon 105684 105789 1000 + . gene_id "MSTRG.45225"; transcript_id "MSTRG.45225.1"; exon_number "6"; scaffold_2161 StringTie exon 105985 106062 1000 + . gene_id "MSTRG.45225"; transcript_id "MSTRG.45225.1"; exon_number "7"; scaffold_21621 StringTie exon 2581 2871 1000 . . gene_id "MSTRG.45245"; transcript_id "MSTRG.45245.1"; exon_number "1"; scaffold_2166 StringTie exon 34864 35292 1000 . . gene_id "MSTRG.45284"; transcript_id "MSTRG.45284.1"; exon_number "1"; scaffold_2169 StringTie exon 75007 75585 1000 . . gene_id "MSTRG.45332"; transcript_id "MSTRG.45332.1"; exon_number "1"; scaffold_217 StringTie exon 131417 131790 1000 . . gene_id "MSTRG.45353"; transcript_id "MSTRG.45353.1"; exon_number "1"; scaffold_217 StringTie exon 527283 527502 1000 . . gene_id "MSTRG.45374"; transcript_id "MSTRG.45374.1"; exon_number "1"; scaffold_217 StringTie exon 773226 773674 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "1"; scaffold_217 StringTie exon 775823 775843 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "2"; scaffold_217 StringTie exon 778155 778341 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "3"; scaffold_217 StringTie exon 778627 778763 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "4"; scaffold_217 StringTie exon 778968 779127 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "5"; scaffold_217 StringTie exon 780124 780263 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "6"; scaffold_217 StringTie exon 780538 780733 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "7"; scaffold_217 StringTie exon 781948 782036 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "8"; scaffold_217 StringTie exon 784115 784282 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "9"; scaffold_217 StringTie exon 784807 784941 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "10"; scaffold_217 StringTie exon 790606 790794 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "11"; scaffold_217 StringTie exon 791124 791228 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "12"; scaffold_217 StringTie exon 791638 791781 1000 - . gene_id "MSTRG.45384"; transcript_id "MSTRG.45384.2"; exon_number "13"; scaffold_217 StringTie exon 848015 848055 1000 + . gene_id "MSTRG.45389"; transcript_id "MSTRG.45389.1"; exon_number "1"; scaffold_217 StringTie exon 850057 850190 1000 + . gene_id "MSTRG.45389"; transcript_id "MSTRG.45389.1"; exon_number "2"; scaffold_217 StringTie exon 852846 852968 1000 + . gene_id "MSTRG.45389"; transcript_id "MSTRG.45389.1"; exon_number "3"; scaffold_217 StringTie exon 853200 853289 1000 + . gene_id "MSTRG.45389"; transcript_id "MSTRG.45389.1"; exon_number "4"; scaffold_217 StringTie exon 854154 854204 1000 + . gene_id "MSTRG.45389"; transcript_id "MSTRG.45389.1"; exon_number "5"; scaffold_217 StringTie exon 854437 854569 1000 + . gene_id "MSTRG.45389"; transcript_id "MSTRG.45389.1"; exon_number "6"; scaffold_217 StringTie exon 950167 950224 1000 + . gene_id "MSTRG.45399"; transcript_id "MSTRG.45399.1"; exon_number "1"; scaffold_217 StringTie exon 950367 950489 1000 + . gene_id "MSTRG.45399"; transcript_id "MSTRG.45399.1"; exon_number "2"; scaffold_217 StringTie exon 950680 950822 1000 + . gene_id "MSTRG.45399"; transcript_id "MSTRG.45399.1"; exon_number "3"; scaffold_217 StringTie exon 950918 950967 1000 + . gene_id "MSTRG.45399"; transcript_id "MSTRG.45399.1"; exon_number "4"; scaffold_217 StringTie exon 956380 956607 1000 + . gene_id "MSTRG.45403"; transcript_id "MSTRG.45403.1"; exon_number "1"; scaffold_217 StringTie exon 1107963 1108056 1000 + . gene_id "MSTRG.45414"; transcript_id "MSTRG.45414.1"; exon_number "1"; scaffold_217 StringTie exon 1108230 1108350 1000 + . gene_id "MSTRG.45414"; transcript_id "MSTRG.45414.1"; exon_number "2"; scaffold_2170 StringTie exon 63277 63544 1000 . . gene_id "MSTRG.45425"; transcript_id "MSTRG.45425.1"; exon_number "1"; scaffold_2170 StringTie exon 85632 85859 1000 . . gene_id "MSTRG.45428"; transcript_id "MSTRG.45428.1"; exon_number "1"; scaffold_21746 StringTie exon 6001 6573 1000 . . gene_id "MSTRG.45488"; transcript_id "MSTRG.45488.1"; exon_number "1"; scaffold_21762 StringTie exon 6404 6691 1000 . . gene_id "MSTRG.45505"; transcript_id "MSTRG.45505.1"; exon_number "1"; scaffold_2178 StringTie exon 109696 109927 1000 . . gene_id "MSTRG.45540"; transcript_id "MSTRG.45540.1"; exon_number "1"; scaffold_2179 StringTie exon 76960 77141 1000 + . gene_id "MSTRG.45554"; transcript_id "MSTRG.45554.1"; exon_number "1"; scaffold_2179 StringTie exon 89777 89926 1000 + . gene_id "MSTRG.45554"; transcript_id "MSTRG.45554.1"; exon_number "2"; scaffold_2179 StringTie exon 104337 104397 1000 + . gene_id "MSTRG.45556"; transcript_id "MSTRG.45556.1"; exon_number "1"; scaffold_2179 StringTie exon 104761 104943 1000 + . gene_id "MSTRG.45556"; transcript_id "MSTRG.45556.1"; exon_number "2"; scaffold_2179 StringTie exon 105387 105511 1000 + . gene_id "MSTRG.45556"; transcript_id "MSTRG.45556.1"; exon_number "3"; scaffold_2179 StringTie exon 106987 107050 1000 + . gene_id "MSTRG.45556"; transcript_id "MSTRG.45556.1"; exon_number "4"; scaffold_2179 StringTie exon 107164 107232 1000 + . gene_id "MSTRG.45556"; transcript_id "MSTRG.45556.1"; exon_number "5"; scaffold_2179 StringTie exon 113120 113584 1000 + . gene_id "MSTRG.45556"; transcript_id "MSTRG.45556.1"; exon_number "6"; scaffold_218 StringTie exon 457528 457804 1000 . . gene_id "MSTRG.45589"; transcript_id "MSTRG.45589.1"; exon_number "1"; scaffold_218 StringTie exon 569014 569209 1000 + . gene_id "MSTRG.45595"; transcript_id "MSTRG.45595.1"; exon_number "1"; scaffold_218 StringTie exon 573899 574026 1000 + . gene_id "MSTRG.45595"; transcript_id "MSTRG.45595.1"; exon_number "2"; scaffold_218 StringTie exon 575009 575110 1000 + . gene_id "MSTRG.45595"; transcript_id "MSTRG.45595.1"; exon_number "3"; scaffold_218 StringTie exon 577365 577531 1000 + . gene_id "MSTRG.45595"; transcript_id "MSTRG.45595.1"; exon_number "4"; scaffold_218 StringTie exon 595801 595929 1000 + . gene_id "MSTRG.45595"; transcript_id "MSTRG.45595.1"; exon_number "5"; scaffold_218 StringTie exon 713513 713854 1000 . . gene_id "MSTRG.45602"; transcript_id "MSTRG.45602.1"; exon_number "1"; scaffold_218 StringTie exon 767711 767946 1000 . . gene_id "MSTRG.45607"; transcript_id "MSTRG.45607.1"; exon_number "1"; scaffold_218 StringTie exon 876779 877846 1000 . . gene_id "MSTRG.45611"; transcript_id "MSTRG.45611.1"; exon_number "1"; scaffold_218 StringTie exon 883616 884061 1000 - . gene_id "MSTRG.45614"; transcript_id "MSTRG.45614.1"; exon_number "1"; scaffold_218 StringTie exon 901628 901735 1000 - . gene_id "MSTRG.45614"; transcript_id "MSTRG.45614.1"; exon_number "2"; scaffold_218 StringTie exon 907337 907495 1000 - . gene_id "MSTRG.45614"; transcript_id "MSTRG.45614.1"; exon_number "3"; scaffold_218 StringTie exon 908866 909087 1000 - . gene_id "MSTRG.45614"; transcript_id "MSTRG.45614.1"; exon_number "4"; scaffold_218 StringTie exon 911831 911894 1000 - . gene_id "MSTRG.45614"; transcript_id "MSTRG.45614.1"; exon_number "5"; scaffold_2180 StringTie exon 75870 75892 1000 - . gene_id "MSTRG.45646"; transcript_id "MSTRG.45646.1"; exon_number "1"; scaffold_2180 StringTie exon 76194 76339 1000 - . gene_id "MSTRG.45646"; transcript_id "MSTRG.45646.1"; exon_number "2"; scaffold_2180 StringTie exon 76820 76877 1000 - . gene_id "MSTRG.45646"; transcript_id "MSTRG.45646.1"; exon_number "3"; scaffold_2182 StringTie exon 32854 33062 1000 . . gene_id "MSTRG.45668"; transcript_id "MSTRG.45668.1"; exon_number "1"; scaffold_2182 StringTie exon 110004 110221 1000 + . gene_id "MSTRG.45675"; transcript_id "MSTRG.45675.1"; exon_number "1"; scaffold_2183 StringTie exon 40301 40832 1000 - . gene_id "MSTRG.45685"; transcript_id "MSTRG.45685.1"; exon_number "1"; scaffold_2184 StringTie exon 17555 17779 1000 . . gene_id "MSTRG.45699"; transcript_id "MSTRG.45699.1"; exon_number "1"; scaffold_21842 StringTie exon 5125 5490 1000 . . gene_id "MSTRG.45710"; transcript_id "MSTRG.45710.1"; exon_number "1"; scaffold_2185 StringTie exon 8872 12729 1000 + . gene_id "MSTRG.45715"; transcript_id "MSTRG.45715.3"; exon_number "1"; scaffold_2185 StringTie exon 40897 40912 1000 + . gene_id "MSTRG.45715"; transcript_id "MSTRG.45715.3"; exon_number "2"; scaffold_2186 StringTie exon 35972 36195 1000 + . gene_id "MSTRG.45741"; transcript_id "MSTRG.45741.2"; exon_number "1"; scaffold_2187 StringTie exon 35043 35291 1000 . . gene_id "MSTRG.45760"; transcript_id "MSTRG.45760.1"; exon_number "1"; scaffold_21876 StringTie exon 615 864 1000 . . gene_id "MSTRG.45776"; transcript_id "MSTRG.45776.1"; exon_number "1"; scaffold_2188 StringTie exon 91212 91295 1000 - . gene_id "MSTRG.45785"; transcript_id "MSTRG.45785.2"; exon_number "1"; scaffold_2188 StringTie exon 91551 91661 1000 - . gene_id "MSTRG.45785"; transcript_id "MSTRG.45785.2"; exon_number "2"; scaffold_2188 StringTie exon 92347 92424 1000 - . gene_id "MSTRG.45785"; transcript_id "MSTRG.45785.2"; exon_number "3"; scaffold_21885 StringTie exon 17 300 1000 . . gene_id "MSTRG.45790"; transcript_id "MSTRG.45790.1"; exon_number "1"; scaffold_21899 StringTie exon 4195 4285 1000 - . gene_id "MSTRG.45812"; transcript_id "MSTRG.45812.1"; exon_number "1"; scaffold_21899 StringTie exon 5397 5543 1000 - . gene_id "MSTRG.45812"; transcript_id "MSTRG.45812.1"; exon_number "2"; scaffold_219 StringTie exon 11886 12025 1000 - . gene_id "MSTRG.45816"; transcript_id "MSTRG.45816.1"; exon_number "1"; scaffold_219 StringTie exon 13878 13973 1000 - . gene_id "MSTRG.45816"; transcript_id "MSTRG.45816.1"; exon_number "2"; scaffold_219 StringTie exon 405051 405790 1000 . . gene_id "MSTRG.45848"; transcript_id "MSTRG.45848.1"; exon_number "1"; scaffold_219 StringTie exon 489548 489986 1000 . . gene_id "MSTRG.45857"; transcript_id "MSTRG.45857.1"; exon_number "1"; scaffold_219 StringTie exon 1208710 1208922 1000 . . gene_id "MSTRG.45887"; transcript_id "MSTRG.45887.1"; exon_number "1"; scaffold_2190 StringTie exon 37616 37644 1000 + . gene_id "MSTRG.45889"; transcript_id "MSTRG.45889.2"; exon_number "1"; scaffold_2190 StringTie exon 38080 38259 1000 + . gene_id "MSTRG.45889"; transcript_id "MSTRG.45889.2"; exon_number "2"; scaffold_2190 StringTie exon 38451 38561 1000 + . gene_id "MSTRG.45889"; transcript_id "MSTRG.45889.2"; exon_number "3"; scaffold_2190 StringTie exon 38660 38784 1000 + . gene_id "MSTRG.45889"; transcript_id "MSTRG.45889.2"; exon_number "4"; scaffold_2190 StringTie exon 38947 39806 1000 + . gene_id "MSTRG.45889"; transcript_id "MSTRG.45889.2"; exon_number "5"; scaffold_2190 StringTie exon 99856 100115 1000 - . gene_id "MSTRG.45904"; transcript_id "MSTRG.45904.1"; exon_number "1"; scaffold_2194 StringTie exon 30530 30882 1000 . . gene_id "MSTRG.45947"; transcript_id "MSTRG.45947.1"; exon_number "1"; scaffold_21961 StringTie exon 6765 6982 1000 . . gene_id "MSTRG.45987"; transcript_id "MSTRG.45987.1"; exon_number "1"; scaffold_21963 StringTie exon 2780 3024 1000 . . gene_id "MSTRG.45988"; transcript_id "MSTRG.45988.1"; exon_number "1"; scaffold_21977 StringTie exon 7018 7224 1000 . . gene_id "MSTRG.46005"; transcript_id "MSTRG.46005.1"; exon_number "1"; scaffold_21984 StringTie exon 4308 4372 1000 + . gene_id "MSTRG.46013"; transcript_id "MSTRG.46013.1"; exon_number "1"; scaffold_21984 StringTie exon 4636 4782 1000 + . gene_id "MSTRG.46013"; transcript_id "MSTRG.46013.1"; exon_number "2"; scaffold_22 StringTie exon 210453 210495 1000 + . gene_id "MSTRG.46060"; transcript_id "MSTRG.46060.1"; exon_number "1"; scaffold_22 StringTie exon 210581 210659 1000 + . gene_id "MSTRG.46060"; transcript_id "MSTRG.46060.1"; exon_number "2"; scaffold_22 StringTie exon 219685 219956 1000 + . gene_id "MSTRG.46060"; transcript_id "MSTRG.46060.1"; exon_number "3"; scaffold_22 StringTie exon 270971 271196 1000 . . gene_id "MSTRG.46070"; transcript_id "MSTRG.46070.1"; exon_number "1"; scaffold_22 StringTie exon 338891 339092 1000 . . gene_id "MSTRG.46075"; transcript_id "MSTRG.46075.1"; exon_number "1"; scaffold_22 StringTie exon 591419 591706 1000 . . gene_id "MSTRG.46094"; transcript_id "MSTRG.46094.1"; exon_number "1"; scaffold_22 StringTie exon 1475952 1476281 1000 . . gene_id "MSTRG.46148"; transcript_id "MSTRG.46148.1"; exon_number "1"; scaffold_22 StringTie exon 1484355 1484616 1000 . . gene_id "MSTRG.46149"; transcript_id "MSTRG.46149.1"; exon_number "1"; scaffold_22 StringTie exon 1530111 1530121 1000 + . gene_id "MSTRG.46157"; transcript_id "MSTRG.46157.1"; exon_number "1"; scaffold_22 StringTie exon 1530661 1531095 1000 + . gene_id "MSTRG.46157"; transcript_id "MSTRG.46157.1"; exon_number "2"; scaffold_22 StringTie exon 1532415 1532651 1000 . . gene_id "MSTRG.46159"; transcript_id "MSTRG.46159.1"; exon_number "1"; scaffold_22 StringTie exon 1825863 1825997 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "1"; scaffold_22 StringTie exon 1830255 1830841 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "2"; scaffold_22 StringTie exon 1831628 1831858 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "3"; scaffold_22 StringTie exon 1843181 1843285 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "4"; scaffold_22 StringTie exon 1846262 1846304 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "5"; scaffold_22 StringTie exon 1850646 1850721 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "6"; scaffold_22 StringTie exon 1851983 1852201 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "7"; scaffold_22 StringTie exon 1852478 1852565 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "8"; scaffold_22 StringTie exon 1853718 1853870 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "9"; scaffold_22 StringTie exon 1854190 1854287 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "10"; scaffold_22 StringTie exon 1856419 1856591 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "11"; scaffold_22 StringTie exon 1859127 1859221 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "12"; scaffold_22 StringTie exon 1864495 1864653 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "13"; scaffold_22 StringTie exon 1866771 1866833 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "14"; scaffold_22 StringTie exon 1867156 1867374 1000 + . gene_id "MSTRG.46176"; transcript_id "MSTRG.46176.2"; exon_number "15"; scaffold_22 StringTie exon 1935298 1935583 1000 . . gene_id "MSTRG.46184"; transcript_id "MSTRG.46184.1"; exon_number "1"; scaffold_22 StringTie exon 1952836 1953106 1000 . . gene_id "MSTRG.46186"; transcript_id "MSTRG.46186.1"; exon_number "1"; scaffold_22 StringTie exon 1979532 1979833 1000 . . gene_id "MSTRG.46188"; transcript_id "MSTRG.46188.1"; exon_number "1"; scaffold_22 StringTie exon 2058634 2058840 1000 . . gene_id "MSTRG.46201"; transcript_id "MSTRG.46201.1"; exon_number "1"; scaffold_22 StringTie exon 2064159 2064173 1000 - . gene_id "MSTRG.46203"; transcript_id "MSTRG.46203.1"; exon_number "1"; scaffold_22 StringTie exon 2064461 2064579 1000 - . gene_id "MSTRG.46203"; transcript_id "MSTRG.46203.1"; exon_number "2"; scaffold_22 StringTie exon 2067938 2068123 1000 - . gene_id "MSTRG.46203"; transcript_id "MSTRG.46203.1"; exon_number "3"; scaffold_22 StringTie exon 2068622 2068798 1000 - . gene_id "MSTRG.46203"; transcript_id "MSTRG.46203.1"; exon_number "4"; scaffold_22 StringTie exon 2071144 2071287 1000 - . gene_id "MSTRG.46203"; transcript_id "MSTRG.46203.1"; exon_number "5"; scaffold_22 StringTie exon 2072989 2073225 1000 - . gene_id "MSTRG.46203"; transcript_id "MSTRG.46203.1"; exon_number "6"; scaffold_22 StringTie exon 2073622 2073758 1000 - . gene_id "MSTRG.46203"; transcript_id "MSTRG.46203.1"; exon_number "7"; scaffold_22 StringTie exon 2073988 2074047 1000 - . gene_id "MSTRG.46203"; transcript_id "MSTRG.46203.1"; exon_number "8"; scaffold_22 StringTie exon 2347874 2348020 1000 + . gene_id "MSTRG.46214"; transcript_id "MSTRG.46214.1"; exon_number "1"; scaffold_22 StringTie exon 2348228 2348599 1000 + . gene_id "MSTRG.46214"; transcript_id "MSTRG.46214.1"; exon_number "2"; scaffold_22 StringTie exon 2392947 2393514 1000 - . gene_id "MSTRG.46220"; transcript_id "MSTRG.46220.1"; exon_number "1"; scaffold_22 StringTie exon 2404669 2404994 1000 . . gene_id "MSTRG.46221"; transcript_id "MSTRG.46221.1"; exon_number "1"; scaffold_22 StringTie exon 2531496 2532637 1000 + . gene_id "MSTRG.46231"; transcript_id "MSTRG.46231.1"; exon_number "1"; scaffold_22 StringTie exon 2548309 2548448 1000 + . gene_id "MSTRG.46231"; transcript_id "MSTRG.46231.1"; exon_number "2"; scaffold_22 StringTie exon 2550929 2550952 1000 + . gene_id "MSTRG.46231"; transcript_id "MSTRG.46231.1"; exon_number "3"; scaffold_22 StringTie exon 2554426 2554539 1000 + . gene_id "MSTRG.46231"; transcript_id "MSTRG.46231.1"; exon_number "4"; scaffold_220 StringTie exon 125882 126206 1000 . . gene_id "MSTRG.46262"; transcript_id "MSTRG.46262.1"; exon_number "1"; scaffold_220 StringTie exon 128639 128908 1000 . . gene_id "MSTRG.46264"; transcript_id "MSTRG.46264.1"; exon_number "1"; scaffold_220 StringTie exon 306201 306784 1000 . . gene_id "MSTRG.46288"; transcript_id "MSTRG.46288.1"; exon_number "1"; scaffold_220 StringTie exon 439411 439735 1000 . . gene_id "MSTRG.46300"; transcript_id "MSTRG.46300.1"; exon_number "1"; scaffold_220 StringTie exon 688516 689296 1000 . . gene_id "MSTRG.46316"; transcript_id "MSTRG.46316.1"; exon_number "1"; scaffold_220 StringTie exon 727059 727587 1000 . . gene_id "MSTRG.46319"; transcript_id "MSTRG.46319.1"; exon_number "1"; scaffold_220 StringTie exon 832353 833689 1000 . . gene_id "MSTRG.46329"; transcript_id "MSTRG.46329.1"; exon_number "1"; scaffold_220 StringTie exon 933536 933837 1000 . . gene_id "MSTRG.46332"; transcript_id "MSTRG.46332.1"; exon_number "1"; scaffold_2201 StringTie exon 22582 22638 1000 + . gene_id "MSTRG.46373"; transcript_id "MSTRG.46373.1"; exon_number "1"; scaffold_2201 StringTie exon 23420 23581 1000 + . gene_id "MSTRG.46373"; transcript_id "MSTRG.46373.1"; exon_number "2"; scaffold_2201 StringTie exon 23755 23906 1000 + . gene_id "MSTRG.46373"; transcript_id "MSTRG.46373.1"; exon_number "3"; scaffold_2201 StringTie exon 23998 24172 1000 + . gene_id "MSTRG.46373"; transcript_id "MSTRG.46373.1"; exon_number "4"; scaffold_2201 StringTie exon 24259 25195 1000 + . gene_id "MSTRG.46373"; transcript_id "MSTRG.46373.1"; exon_number "5"; scaffold_2201 StringTie exon 114325 114534 1000 . . gene_id "MSTRG.46382"; transcript_id "MSTRG.46382.1"; exon_number "1"; scaffold_22015 StringTie exon 6578 6804 1000 . . gene_id "MSTRG.46385"; transcript_id "MSTRG.46385.1"; exon_number "1"; scaffold_22029 StringTie exon 1054 1252 1000 + . gene_id "MSTRG.46401"; transcript_id "MSTRG.46401.1"; exon_number "1"; scaffold_22029 StringTie exon 1722 1848 1000 + . gene_id "MSTRG.46401"; transcript_id "MSTRG.46401.1"; exon_number "2"; scaffold_22029 StringTie exon 1977 2075 1000 + . gene_id "MSTRG.46401"; transcript_id "MSTRG.46401.1"; exon_number "3"; scaffold_22029 StringTie exon 2669 2800 1000 + . gene_id "MSTRG.46401"; transcript_id "MSTRG.46401.1"; exon_number "4"; scaffold_22029 StringTie exon 3336 3485 1000 + . gene_id "MSTRG.46401"; transcript_id "MSTRG.46401.1"; exon_number "5"; scaffold_2203 StringTie exon 37526 37552 1000 - . gene_id "MSTRG.46406"; transcript_id "MSTRG.46406.1"; exon_number "1"; scaffold_2203 StringTie exon 39788 39993 1000 - . gene_id "MSTRG.46406"; transcript_id "MSTRG.46406.1"; exon_number "2"; scaffold_2203 StringTie exon 40337 40543 1000 - . gene_id "MSTRG.46406"; transcript_id "MSTRG.46406.1"; exon_number "3"; scaffold_2203 StringTie exon 40792 40889 1000 - . gene_id "MSTRG.46406"; transcript_id "MSTRG.46406.1"; exon_number "4"; scaffold_2204 StringTie exon 25549 25761 1000 . . gene_id "MSTRG.46423"; transcript_id "MSTRG.46423.1"; exon_number "1"; scaffold_2204 StringTie exon 77292 77825 1000 . . gene_id "MSTRG.46437"; transcript_id "MSTRG.46437.1"; exon_number "1"; scaffold_2206 StringTie exon 19256 19421 1000 - . gene_id "MSTRG.46464"; transcript_id "MSTRG.46464.1"; exon_number "1"; scaffold_2206 StringTie exon 19619 19687 1000 - . gene_id "MSTRG.46464"; transcript_id "MSTRG.46464.1"; exon_number "2"; scaffold_2206 StringTie exon 19877 19967 1000 - . gene_id "MSTRG.46464"; transcript_id "MSTRG.46464.1"; exon_number "3"; scaffold_2206 StringTie exon 20742 21076 1000 - . gene_id "MSTRG.46464"; transcript_id "MSTRG.46464.1"; exon_number "4"; scaffold_22073 StringTie exon 2135 2970 1000 . . gene_id "MSTRG.46487"; transcript_id "MSTRG.46487.1"; exon_number "1"; scaffold_2208 StringTie exon 21416 21798 1000 . . gene_id "MSTRG.46495"; transcript_id "MSTRG.46495.1"; exon_number "1"; scaffold_22080 StringTie exon 614 1397 1000 . . gene_id "MSTRG.46501"; transcript_id "MSTRG.46501.1"; exon_number "1"; scaffold_22086 StringTie exon 4038 4162 1000 - . gene_id "MSTRG.46505"; transcript_id "MSTRG.46505.1"; exon_number "1"; scaffold_22086 StringTie exon 4468 4656 1000 - . gene_id "MSTRG.46505"; transcript_id "MSTRG.46505.1"; exon_number "2"; scaffold_22086 StringTie exon 4742 4872 1000 - . gene_id "MSTRG.46505"; transcript_id "MSTRG.46505.1"; exon_number "3"; scaffold_22086 StringTie exon 5227 5364 1000 - . gene_id "MSTRG.46505"; transcript_id "MSTRG.46505.1"; exon_number "4"; scaffold_22086 StringTie exon 6218 6750 1000 - . gene_id "MSTRG.46505"; transcript_id "MSTRG.46505.1"; exon_number "5"; scaffold_22087 StringTie exon 4917 5248 1000 . . gene_id "MSTRG.46506"; transcript_id "MSTRG.46506.1"; exon_number "1"; scaffold_2209 StringTie exon 84412 84554 1000 - . gene_id "MSTRG.46519"; transcript_id "MSTRG.46519.1"; exon_number "1"; scaffold_2209 StringTie exon 85905 86016 1000 - . gene_id "MSTRG.46519"; transcript_id "MSTRG.46519.1"; exon_number "2"; scaffold_2209 StringTie exon 86614 86787 1000 - . gene_id "MSTRG.46519"; transcript_id "MSTRG.46519.1"; exon_number "3"; scaffold_2209 StringTie exon 86904 86982 1000 - . gene_id "MSTRG.46519"; transcript_id "MSTRG.46519.1"; exon_number "4"; scaffold_2209 StringTie exon 87550 87614 1000 - . gene_id "MSTRG.46519"; transcript_id "MSTRG.46519.1"; exon_number "5"; scaffold_22095 StringTie exon 6498 6508 1000 + . gene_id "MSTRG.46524"; transcript_id "MSTRG.46524.1"; exon_number "1"; scaffold_22095 StringTie exon 6662 6793 1000 + . gene_id "MSTRG.46524"; transcript_id "MSTRG.46524.1"; exon_number "2"; scaffold_22095 StringTie exon 6908 6964 1000 + . gene_id "MSTRG.46524"; transcript_id "MSTRG.46524.1"; exon_number "3"; scaffold_221 StringTie exon 1060752 1060991 1000 . . gene_id "MSTRG.46601"; transcript_id "MSTRG.46601.1"; exon_number "1"; scaffold_221 StringTie exon 1102596 1102852 1000 - . gene_id "MSTRG.46610"; transcript_id "MSTRG.46610.1"; exon_number "1"; scaffold_221 StringTie exon 1141625 1141840 1000 . . gene_id "MSTRG.46616"; transcript_id "MSTRG.46616.1"; exon_number "1"; scaffold_221 StringTie exon 1193329 1193452 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "1"; scaffold_221 StringTie exon 1193574 1193773 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "2"; scaffold_221 StringTie exon 1193962 1194069 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "3"; scaffold_221 StringTie exon 1194570 1194659 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "4"; scaffold_221 StringTie exon 1194959 1195114 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "5"; scaffold_221 StringTie exon 1195926 1196003 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "6"; scaffold_221 StringTie exon 1196754 1196836 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "7"; scaffold_221 StringTie exon 1197147 1197311 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "8"; scaffold_221 StringTie exon 1197463 1197552 1000 + . gene_id "MSTRG.46629"; transcript_id "MSTRG.46629.1"; exon_number "9"; scaffold_22138 StringTie exon 2916 3166 1000 . . gene_id "MSTRG.46669"; transcript_id "MSTRG.46669.1"; exon_number "1"; scaffold_2215 StringTie exon 86298 86610 1000 + . gene_id "MSTRG.46701"; transcript_id "MSTRG.46701.1"; exon_number "1"; scaffold_2215 StringTie exon 103393 103562 1000 + . gene_id "MSTRG.46701"; transcript_id "MSTRG.46701.1"; exon_number "2"; scaffold_2218 StringTie exon 73581 73862 1000 . . gene_id "MSTRG.46738"; transcript_id "MSTRG.46738.1"; exon_number "1"; scaffold_2218 StringTie exon 74339 74613 1000 . . gene_id "MSTRG.46739"; transcript_id "MSTRG.46739.1"; exon_number "1"; scaffold_22189 StringTie exon 973 1315 1000 . . gene_id "MSTRG.46750"; transcript_id "MSTRG.46750.1"; exon_number "1"; scaffold_222 StringTie exon 21024 21830 1000 . . gene_id "MSTRG.46763"; transcript_id "MSTRG.46763.1"; exon_number "1"; scaffold_222 StringTie exon 67279 67404 1000 + . gene_id "MSTRG.46764"; transcript_id "MSTRG.46764.1"; exon_number "1"; scaffold_222 StringTie exon 68015 68186 1000 + . gene_id "MSTRG.46764"; transcript_id "MSTRG.46764.1"; exon_number "2"; scaffold_222 StringTie exon 75362 75519 1000 + . gene_id "MSTRG.46764"; transcript_id "MSTRG.46764.1"; exon_number "3"; scaffold_222 StringTie exon 78044 78167 1000 + . gene_id "MSTRG.46764"; transcript_id "MSTRG.46764.1"; exon_number "4"; scaffold_222 StringTie exon 78798 78828 1000 + . gene_id "MSTRG.46764"; transcript_id "MSTRG.46764.1"; exon_number "5"; scaffold_222 StringTie exon 661496 661774 1000 . . gene_id "MSTRG.46795"; transcript_id "MSTRG.46795.1"; exon_number "1"; scaffold_222 StringTie exon 1058627 1058928 1000 . . gene_id "MSTRG.46819"; transcript_id "MSTRG.46819.1"; exon_number "1"; scaffold_222 StringTie exon 1070184 1070408 1000 . . gene_id "MSTRG.46820"; transcript_id "MSTRG.46820.1"; exon_number "1"; scaffold_222 StringTie exon 1100743 1100972 1000 . . gene_id "MSTRG.46824"; transcript_id "MSTRG.46824.1"; exon_number "1"; scaffold_22241 StringTie exon 3347 3541 1000 + . gene_id "MSTRG.46924"; transcript_id "MSTRG.46924.2"; exon_number "1"; scaffold_22241 StringTie exon 3882 3900 1000 + . gene_id "MSTRG.46924"; transcript_id "MSTRG.46924.2"; exon_number "2"; scaffold_22246 StringTie exon 6441 6670 1000 . . gene_id "MSTRG.46928"; transcript_id "MSTRG.46928.1"; exon_number "1"; scaffold_2226 StringTie exon 86326 86536 1000 . . gene_id "MSTRG.46953"; transcript_id "MSTRG.46953.1"; exon_number "1"; scaffold_2227 StringTie exon 20594 20798 1000 . . gene_id "MSTRG.46965"; transcript_id "MSTRG.46965.1"; exon_number "1"; scaffold_22270 StringTie exon 3767 3890 1000 - . gene_id "MSTRG.46974"; transcript_id "MSTRG.46974.1"; exon_number "1"; scaffold_22270 StringTie exon 3976 4112 1000 - . gene_id "MSTRG.46974"; transcript_id "MSTRG.46974.1"; exon_number "2"; scaffold_22282 StringTie exon 2746 2999 1000 . . gene_id "MSTRG.46984"; transcript_id "MSTRG.46984.1"; exon_number "1"; scaffold_22288 StringTie exon 3413 3615 1000 . . gene_id "MSTRG.46990"; transcript_id "MSTRG.46990.1"; exon_number "1"; scaffold_2229 StringTie exon 84144 84439 1000 . . gene_id "MSTRG.46995"; transcript_id "MSTRG.46995.1"; exon_number "1"; scaffold_2229 StringTie exon 91748 92270 1000 . . gene_id "MSTRG.46998"; transcript_id "MSTRG.46998.1"; exon_number "1"; scaffold_223 StringTie exon 295284 295519 1000 . . gene_id "MSTRG.47041"; transcript_id "MSTRG.47041.1"; exon_number "1"; scaffold_223 StringTie exon 546062 546331 1000 . . gene_id "MSTRG.47064"; transcript_id "MSTRG.47064.1"; exon_number "1"; scaffold_223 StringTie exon 662105 664933 1000 + . gene_id "MSTRG.47077"; transcript_id "MSTRG.47077.1"; exon_number "1"; scaffold_223 StringTie exon 771826 772011 1000 + . gene_id "MSTRG.47089"; transcript_id "MSTRG.47089.1"; exon_number "1"; scaffold_223 StringTie exon 772173 772250 1000 + . gene_id "MSTRG.47089"; transcript_id "MSTRG.47089.1"; exon_number "2"; scaffold_223 StringTie exon 778217 778360 1000 + . gene_id "MSTRG.47089"; transcript_id "MSTRG.47089.1"; exon_number "3"; scaffold_223 StringTie exon 778975 780330 1000 . . gene_id "MSTRG.47091"; transcript_id "MSTRG.47091.1"; exon_number "1"; scaffold_223 StringTie exon 866704 866916 1000 . . gene_id "MSTRG.47097"; transcript_id "MSTRG.47097.1"; exon_number "1"; scaffold_223 StringTie exon 875383 875653 1000 . . gene_id "MSTRG.47098"; transcript_id "MSTRG.47098.1"; exon_number "1"; scaffold_223 StringTie exon 982829 983608 1000 . . gene_id "MSTRG.47105"; transcript_id "MSTRG.47105.1"; exon_number "1"; scaffold_22328 StringTie exon 6458 7022 1000 . . gene_id "MSTRG.47154"; transcript_id "MSTRG.47154.1"; exon_number "1"; scaffold_2233 StringTie exon 13690 14569 1000 . . gene_id "MSTRG.47160"; transcript_id "MSTRG.47160.1"; exon_number "1"; scaffold_2233 StringTie exon 70972 71209 1000 . . gene_id "MSTRG.47164"; transcript_id "MSTRG.47164.1"; exon_number "1"; scaffold_22340 StringTie exon 5368 5786 1000 . . gene_id "MSTRG.47177"; transcript_id "MSTRG.47177.1"; exon_number "1"; scaffold_2235 StringTie exon 68383 68616 1000 . . gene_id "MSTRG.47195"; transcript_id "MSTRG.47195.1"; exon_number "1"; scaffold_2236 StringTie exon 20890 21434 1000 . . gene_id "MSTRG.47211"; transcript_id "MSTRG.47211.1"; exon_number "1"; scaffold_2236 StringTie exon 71929 72142 1000 . . gene_id "MSTRG.47212"; transcript_id "MSTRG.47212.1"; exon_number "1"; scaffold_22360 StringTie exon 5580 5799 1000 . . gene_id "MSTRG.47217"; transcript_id "MSTRG.47217.1"; exon_number "1"; scaffold_2238 StringTie exon 64426 64661 1000 . . gene_id "MSTRG.47242"; transcript_id "MSTRG.47242.1"; exon_number "1"; scaffold_22392 StringTie exon 930 1177 1000 . . gene_id "MSTRG.47252"; transcript_id "MSTRG.47252.1"; exon_number "1"; scaffold_224 StringTie exon 130996 131482 1000 - . gene_id "MSTRG.47271"; transcript_id "MSTRG.47271.1"; exon_number "1"; scaffold_224 StringTie exon 131697 131822 1000 - . gene_id "MSTRG.47271"; transcript_id "MSTRG.47271.1"; exon_number "2"; scaffold_224 StringTie exon 132116 132274 1000 - . gene_id "MSTRG.47271"; transcript_id "MSTRG.47271.1"; exon_number "3"; scaffold_224 StringTie exon 135027 135065 1000 - . gene_id "MSTRG.47271"; transcript_id "MSTRG.47271.1"; exon_number "4"; scaffold_224 StringTie exon 144486 145363 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "1"; scaffold_224 StringTie exon 146395 146433 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "2"; scaffold_224 StringTie exon 147186 147372 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "3"; scaffold_224 StringTie exon 148693 148829 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "4"; scaffold_224 StringTie exon 149275 149434 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "5"; scaffold_224 StringTie exon 149594 149733 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "6"; scaffold_224 StringTie exon 150032 150227 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "7"; scaffold_224 StringTie exon 150329 150417 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "8"; scaffold_224 StringTie exon 152104 152271 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "9"; scaffold_224 StringTie exon 152423 152557 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "10"; scaffold_224 StringTie exon 153200 153388 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "11"; scaffold_224 StringTie exon 153473 153737 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "12"; scaffold_224 StringTie exon 154868 155004 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "13"; scaffold_224 StringTie exon 155097 155203 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "14"; scaffold_224 StringTie exon 155469 155634 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "15"; scaffold_224 StringTie exon 155761 155914 1000 - . gene_id "MSTRG.47273"; transcript_id "MSTRG.47273.1"; exon_number "16"; scaffold_224 StringTie exon 158589 158703 1000 - . gene_id "MSTRG.47274"; transcript_id "MSTRG.47274.4"; exon_number "1"; scaffold_224 StringTie exon 159018 159128 1000 - . gene_id "MSTRG.47274"; transcript_id "MSTRG.47274.4"; exon_number "2"; scaffold_224 StringTie exon 160736 160777 1000 - . gene_id "MSTRG.47274"; transcript_id "MSTRG.47274.4"; exon_number "3"; scaffold_224 StringTie exon 162654 162707 1000 - . gene_id "MSTRG.47274"; transcript_id "MSTRG.47274.4"; exon_number "4"; scaffold_224 StringTie exon 388968 389088 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "1"; scaffold_224 StringTie exon 389253 389337 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "2"; scaffold_224 StringTie exon 390714 390810 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "3"; scaffold_224 StringTie exon 391026 391146 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "4"; scaffold_224 StringTie exon 391252 391417 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "5"; scaffold_224 StringTie exon 391612 391738 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "6"; scaffold_224 StringTie exon 391835 391885 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "7"; scaffold_224 StringTie exon 393362 393632 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "8"; scaffold_224 StringTie exon 393879 394014 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "9"; scaffold_224 StringTie exon 399803 400165 1000 - . gene_id "MSTRG.47298"; transcript_id "MSTRG.47298.2"; exon_number "10"; scaffold_2241 StringTie exon 87382 87880 1000 . . gene_id "MSTRG.47334"; transcript_id "MSTRG.47334.1"; exon_number "1"; scaffold_22434 StringTie exon 1910 2238 1000 . . gene_id "MSTRG.47371"; transcript_id "MSTRG.47371.1"; exon_number "1"; scaffold_2246 StringTie exon 10030 10339 1000 . . gene_id "MSTRG.47412"; transcript_id "MSTRG.47412.1"; exon_number "1"; scaffold_2246 StringTie exon 24270 24761 1000 . . gene_id "MSTRG.47419"; transcript_id "MSTRG.47419.1"; exon_number "1"; scaffold_22463 StringTie exon 363 667 1000 . . gene_id "MSTRG.47428"; transcript_id "MSTRG.47428.1"; exon_number "1"; scaffold_2247 StringTie exon 79597 79817 1000 . . gene_id "MSTRG.47443"; transcript_id "MSTRG.47443.1"; exon_number "1"; scaffold_2248 StringTie exon 62520 62716 1000 + . gene_id "MSTRG.47458"; transcript_id "MSTRG.47458.2"; exon_number "1"; scaffold_2248 StringTie exon 64384 64455 1000 + . gene_id "MSTRG.47458"; transcript_id "MSTRG.47458.2"; exon_number "2"; scaffold_2248 StringTie exon 110470 110721 1000 . . gene_id "MSTRG.47461"; transcript_id "MSTRG.47461.1"; exon_number "1"; scaffold_22484 StringTie exon 338 812 1000 - . gene_id "MSTRG.47464"; transcript_id "MSTRG.47464.1"; exon_number "1"; scaffold_2249 StringTie exon 11179 12062 1000 . . gene_id "MSTRG.47473"; transcript_id "MSTRG.47473.1"; exon_number "1"; scaffold_225 StringTie exon 30738 30986 1000 . . gene_id "MSTRG.47486"; transcript_id "MSTRG.47486.1"; exon_number "1"; scaffold_225 StringTie exon 87245 88256 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "1"; scaffold_225 StringTie exon 90792 90892 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "2"; scaffold_225 StringTie exon 99324 99439 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "3"; scaffold_225 StringTie exon 100238 100352 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "4"; scaffold_225 StringTie exon 103932 104153 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "5"; scaffold_225 StringTie exon 104579 104683 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "6"; scaffold_225 StringTie exon 104829 105006 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "7"; scaffold_225 StringTie exon 105549 105696 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "8"; scaffold_225 StringTie exon 108285 108443 1000 - . gene_id "MSTRG.47495"; transcript_id "MSTRG.47495.2"; exon_number "9"; scaffold_225 StringTie exon 1161173 1161518 1000 . . gene_id "MSTRG.47553"; transcript_id "MSTRG.47553.1"; exon_number "1"; scaffold_2250 StringTie exon 48498 48863 1000 . . gene_id "MSTRG.47559"; transcript_id "MSTRG.47559.1"; exon_number "1"; scaffold_2251 StringTie exon 94184 94459 1000 + . gene_id "MSTRG.47585"; transcript_id "MSTRG.47585.1"; exon_number "1"; scaffold_2251 StringTie exon 94731 94751 1000 + . gene_id "MSTRG.47585"; transcript_id "MSTRG.47585.1"; exon_number "2"; scaffold_22512 StringTie exon 1 28 1000 - . gene_id "MSTRG.47586"; transcript_id "MSTRG.47586.2"; exon_number "1"; scaffold_22512 StringTie exon 109 328 1000 - . gene_id "MSTRG.47586"; transcript_id "MSTRG.47586.2"; exon_number "2"; scaffold_22512 StringTie exon 738 989 1000 - . gene_id "MSTRG.47587"; transcript_id "MSTRG.47587.1"; exon_number "1"; scaffold_2252 StringTie exon 47096 47486 1000 . . gene_id "MSTRG.47602"; transcript_id "MSTRG.47602.1"; exon_number "1"; scaffold_2253 StringTie exon 394 685 1000 . . gene_id "MSTRG.47612"; transcript_id "MSTRG.47612.1"; exon_number "1"; scaffold_2253 StringTie exon 24650 24880 1000 . . gene_id "MSTRG.47613"; transcript_id "MSTRG.47613.1"; exon_number "1"; scaffold_22543 StringTie exon 423 480 1000 - . gene_id "MSTRG.47630"; transcript_id "MSTRG.47630.1"; exon_number "1"; scaffold_22543 StringTie exon 1788 1863 1000 - . gene_id "MSTRG.47630"; transcript_id "MSTRG.47630.1"; exon_number "2"; scaffold_22543 StringTie exon 2003 2067 1000 - . gene_id "MSTRG.47630"; transcript_id "MSTRG.47630.1"; exon_number "3"; scaffold_22543 StringTie exon 2319 2466 1000 - . gene_id "MSTRG.47630"; transcript_id "MSTRG.47630.1"; exon_number "4"; scaffold_22543 StringTie exon 3605 3765 1000 - . gene_id "MSTRG.47630"; transcript_id "MSTRG.47630.1"; exon_number "5"; scaffold_22543 StringTie exon 4194 4219 1000 - . gene_id "MSTRG.47630"; transcript_id "MSTRG.47630.1"; exon_number "6"; scaffold_2256 StringTie exon 12025 12226 1000 + . gene_id "MSTRG.47656"; transcript_id "MSTRG.47656.1"; exon_number "1"; scaffold_2258 StringTie exon 40895 41455 1000 - . gene_id "MSTRG.47695"; transcript_id "MSTRG.47695.1"; exon_number "1"; scaffold_2258 StringTie exon 41649 41836 1000 - . gene_id "MSTRG.47695"; transcript_id "MSTRG.47695.1"; exon_number "2"; scaffold_2258 StringTie exon 45179 45318 1000 - . gene_id "MSTRG.47695"; transcript_id "MSTRG.47695.1"; exon_number "3"; scaffold_2258 StringTie exon 48958 49092 1000 - . gene_id "MSTRG.47695"; transcript_id "MSTRG.47695.1"; exon_number "4"; scaffold_2259 StringTie exon 17868 18124 1000 . . gene_id "MSTRG.47706"; transcript_id "MSTRG.47706.1"; exon_number "1"; scaffold_226 StringTie exon 90278 91148 1000 . . gene_id "MSTRG.47722"; transcript_id "MSTRG.47722.1"; exon_number "1"; scaffold_226 StringTie exon 120437 120489 1000 - . gene_id "MSTRG.47731"; transcript_id "MSTRG.47731.1"; exon_number "1"; scaffold_226 StringTie exon 120800 120900 1000 - . gene_id "MSTRG.47731"; transcript_id "MSTRG.47731.1"; exon_number "2"; scaffold_226 StringTie exon 122968 123067 1000 - . gene_id "MSTRG.47731"; transcript_id "MSTRG.47731.1"; exon_number "3"; scaffold_226 StringTie exon 124181 124242 1000 - . gene_id "MSTRG.47731"; transcript_id "MSTRG.47731.1"; exon_number "4"; scaffold_226 StringTie exon 276856 277306 1000 . . gene_id "MSTRG.47737"; transcript_id "MSTRG.47737.1"; exon_number "1"; scaffold_226 StringTie exon 306289 306588 1000 . . gene_id "MSTRG.47742"; transcript_id "MSTRG.47742.1"; exon_number "1"; scaffold_226 StringTie exon 320735 320941 1000 . . gene_id "MSTRG.47745"; transcript_id "MSTRG.47745.1"; exon_number "1"; scaffold_226 StringTie exon 416922 417145 1000 . . gene_id "MSTRG.47756"; transcript_id "MSTRG.47756.1"; exon_number "1"; scaffold_226 StringTie exon 1035785 1036010 1000 . . gene_id "MSTRG.47804"; transcript_id "MSTRG.47804.1"; exon_number "1"; scaffold_226 StringTie exon 1104569 1104948 1000 . . gene_id "MSTRG.47808"; transcript_id "MSTRG.47808.1"; exon_number "1"; scaffold_2260 StringTie exon 45410 46036 1000 . . gene_id "MSTRG.47816"; transcript_id "MSTRG.47816.1"; exon_number "1"; scaffold_22623 StringTie exon 1707 1790 1000 + . gene_id "MSTRG.47856"; transcript_id "MSTRG.47856.2"; exon_number "1"; scaffold_22623 StringTie exon 1936 2040 1000 + . gene_id "MSTRG.47856"; transcript_id "MSTRG.47856.2"; exon_number "2"; scaffold_22623 StringTie exon 2264 2347 1000 + . gene_id "MSTRG.47856"; transcript_id "MSTRG.47856.2"; exon_number "3"; scaffold_22623 StringTie exon 2458 2506 1000 + . gene_id "MSTRG.47856"; transcript_id "MSTRG.47856.2"; exon_number "4"; scaffold_2265 StringTie exon 70677 71035 1000 . . gene_id "MSTRG.47899"; transcript_id "MSTRG.47899.1"; exon_number "1"; scaffold_2265 StringTie exon 89388 89597 1000 . . gene_id "MSTRG.47902"; transcript_id "MSTRG.47902.1"; exon_number "1"; scaffold_2266 StringTie exon 26349 26775 1000 . . gene_id "MSTRG.47907"; transcript_id "MSTRG.47907.1"; exon_number "1"; scaffold_2266 StringTie exon 97732 98176 1000 . . gene_id "MSTRG.47918"; transcript_id "MSTRG.47918.1"; exon_number "1"; scaffold_22660 StringTie exon 256 1281 1000 . . gene_id "MSTRG.47922"; transcript_id "MSTRG.47922.1"; exon_number "1"; scaffold_22662 StringTie exon 5827 6175 1000 . . gene_id "MSTRG.47925"; transcript_id "MSTRG.47925.1"; exon_number "1"; scaffold_2268 StringTie exon 53188 53330 1000 - . gene_id "MSTRG.47949"; transcript_id "MSTRG.47949.2"; exon_number "1"; scaffold_2268 StringTie exon 53394 53487 1000 - . gene_id "MSTRG.47949"; transcript_id "MSTRG.47949.2"; exon_number "2"; scaffold_2268 StringTie exon 56756 56844 1000 - . gene_id "MSTRG.47949"; transcript_id "MSTRG.47949.2"; exon_number "3"; scaffold_2268 StringTie exon 66499 66854 1000 . . gene_id "MSTRG.47951"; transcript_id "MSTRG.47951.1"; exon_number "1"; scaffold_2268 StringTie exon 85672 85891 1000 . . gene_id "MSTRG.47953"; transcript_id "MSTRG.47953.1"; exon_number "1"; scaffold_2269 StringTie exon 34978 34991 1000 - . gene_id "MSTRG.47965"; transcript_id "MSTRG.47965.1"; exon_number "1"; scaffold_2269 StringTie exon 35242 35351 1000 - . gene_id "MSTRG.47965"; transcript_id "MSTRG.47965.1"; exon_number "2"; scaffold_2269 StringTie exon 35942 36200 1000 - . gene_id "MSTRG.47965"; transcript_id "MSTRG.47965.1"; exon_number "3"; scaffold_2269 StringTie exon 36402 36497 1000 - . gene_id "MSTRG.47965"; transcript_id "MSTRG.47965.1"; exon_number "4"; scaffold_2269 StringTie exon 43076 43135 1000 - . gene_id "MSTRG.47965"; transcript_id "MSTRG.47965.1"; exon_number "5"; scaffold_2269 StringTie exon 53740 53954 1000 . . gene_id "MSTRG.47970"; transcript_id "MSTRG.47970.1"; exon_number "1"; scaffold_2269 StringTie exon 78959 79444 1000 . . gene_id "MSTRG.47974"; transcript_id "MSTRG.47974.1"; exon_number "1"; scaffold_22741 StringTie exon 5443 5499 1000 + . gene_id "MSTRG.48091"; transcript_id "MSTRG.48091.1"; exon_number "1"; scaffold_22741 StringTie exon 5718 5843 1000 + . gene_id "MSTRG.48091"; transcript_id "MSTRG.48091.1"; exon_number "2"; scaffold_22741 StringTie exon 6139 6190 1000 + . gene_id "MSTRG.48091"; transcript_id "MSTRG.48091.1"; exon_number "3"; scaffold_2277 StringTie exon 81555 81808 1000 . . gene_id "MSTRG.48122"; transcript_id "MSTRG.48122.1"; exon_number "1"; scaffold_22771 StringTie exon 201 509 1000 . . gene_id "MSTRG.48124"; transcript_id "MSTRG.48124.1"; exon_number "1"; scaffold_228 StringTie exon 274349 274586 1000 . . gene_id "MSTRG.48179"; transcript_id "MSTRG.48179.1"; exon_number "1"; scaffold_228 StringTie exon 313169 313756 1000 . . gene_id "MSTRG.48182"; transcript_id "MSTRG.48182.1"; exon_number "1"; scaffold_228 StringTie exon 322745 323000 1000 + . gene_id "MSTRG.48184"; transcript_id "MSTRG.48184.1"; exon_number "1"; scaffold_228 StringTie exon 398396 398559 1000 + . gene_id "MSTRG.48195"; transcript_id "MSTRG.48195.1"; exon_number "1"; scaffold_228 StringTie exon 399515 399638 1000 + . gene_id "MSTRG.48195"; transcript_id "MSTRG.48195.1"; exon_number "2"; scaffold_228 StringTie exon 399721 399803 1000 + . gene_id "MSTRG.48195"; transcript_id "MSTRG.48195.1"; exon_number "3"; scaffold_228 StringTie exon 400082 400225 1000 + . gene_id "MSTRG.48195"; transcript_id "MSTRG.48195.1"; exon_number "4"; scaffold_228 StringTie exon 400330 401019 1000 + . gene_id "MSTRG.48195"; transcript_id "MSTRG.48195.1"; exon_number "5"; scaffold_228 StringTie exon 478424 478499 1000 + . gene_id "MSTRG.48211"; transcript_id "MSTRG.48211.1"; exon_number "1"; scaffold_228 StringTie exon 479766 479822 1000 + . gene_id "MSTRG.48211"; transcript_id "MSTRG.48211.1"; exon_number "2"; scaffold_228 StringTie exon 480309 480424 1000 + . gene_id "MSTRG.48211"; transcript_id "MSTRG.48211.1"; exon_number "3"; scaffold_228 StringTie exon 480543 481073 1000 + . gene_id "MSTRG.48211"; transcript_id "MSTRG.48211.1"; exon_number "4"; scaffold_228 StringTie exon 482416 482474 1000 + . gene_id "MSTRG.48212"; transcript_id "MSTRG.48212.1"; exon_number "1"; scaffold_228 StringTie exon 482973 483070 1000 + . gene_id "MSTRG.48212"; transcript_id "MSTRG.48212.1"; exon_number "2"; scaffold_228 StringTie exon 483347 483511 1000 + . gene_id "MSTRG.48212"; transcript_id "MSTRG.48212.1"; exon_number "3"; scaffold_228 StringTie exon 642452 642535 1000 + . gene_id "MSTRG.48228"; transcript_id "MSTRG.48228.1"; exon_number "1"; scaffold_228 StringTie exon 642798 642932 1000 + . gene_id "MSTRG.48228"; transcript_id "MSTRG.48228.1"; exon_number "2"; scaffold_228 StringTie exon 643286 643332 1000 + . gene_id "MSTRG.48228"; transcript_id "MSTRG.48228.1"; exon_number "3"; scaffold_228 StringTie exon 644045 646876 1000 . . gene_id "MSTRG.48229"; transcript_id "MSTRG.48229.1"; exon_number "1"; scaffold_228 StringTie exon 795365 795561 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "1"; scaffold_228 StringTie exon 797620 797786 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "2"; scaffold_228 StringTie exon 797965 798143 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "3"; scaffold_228 StringTie exon 798239 798377 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "4"; scaffold_228 StringTie exon 798570 798763 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "5"; scaffold_228 StringTie exon 799017 799176 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "6"; scaffold_228 StringTie exon 799459 799542 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "7"; scaffold_228 StringTie exon 799827 799934 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "8"; scaffold_228 StringTie exon 800046 800055 1000 + . gene_id "MSTRG.48235"; transcript_id "MSTRG.48235.1"; exon_number "9"; scaffold_228 StringTie exon 909484 909745 1000 . . gene_id "MSTRG.48254"; transcript_id "MSTRG.48254.1"; exon_number "1"; scaffold_228 StringTie exon 950758 951023 1000 . . gene_id "MSTRG.48260"; transcript_id "MSTRG.48260.1"; exon_number "1"; scaffold_228 StringTie exon 1005306 1005673 1000 . . gene_id "MSTRG.48265"; transcript_id "MSTRG.48265.1"; exon_number "1"; scaffold_2282 StringTie exon 38239 38595 1000 . . gene_id "MSTRG.48329"; transcript_id "MSTRG.48329.1"; exon_number "1"; scaffold_2282 StringTie exon 65428 65604 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "1"; scaffold_2282 StringTie exon 65829 65874 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "2"; scaffold_2282 StringTie exon 66105 66149 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "3"; scaffold_2282 StringTie exon 67654 67703 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "4"; scaffold_2282 StringTie exon 68020 68067 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "5"; scaffold_2282 StringTie exon 68536 68594 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "6"; scaffold_2282 StringTie exon 68770 68851 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "7"; scaffold_2282 StringTie exon 69664 69711 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "8"; scaffold_2282 StringTie exon 70097 70149 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "9"; scaffold_2282 StringTie exon 70642 70689 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "10"; scaffold_2282 StringTie exon 71069 71113 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "11"; scaffold_2282 StringTie exon 71819 72020 1000 + . gene_id "MSTRG.48331"; transcript_id "MSTRG.48331.2"; exon_number "12"; scaffold_2282 StringTie exon 104141 104653 1000 . . gene_id "MSTRG.48336"; transcript_id "MSTRG.48336.1"; exon_number "1"; scaffold_2282 StringTie exon 105392 105638 1000 . . gene_id "MSTRG.48337"; transcript_id "MSTRG.48337.1"; exon_number "1"; scaffold_2283 StringTie exon 53610 53848 1000 . . gene_id "MSTRG.48341"; transcript_id "MSTRG.48341.1"; exon_number "1"; scaffold_2283 StringTie exon 68598 68726 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "1"; scaffold_2283 StringTie exon 70316 70357 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "2"; scaffold_2283 StringTie exon 70443 70533 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "3"; scaffold_2283 StringTie exon 70634 70782 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "4"; scaffold_2283 StringTie exon 70879 70987 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "5"; scaffold_2283 StringTie exon 71254 71381 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "6"; scaffold_2283 StringTie exon 71514 71613 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "7"; scaffold_2283 StringTie exon 71936 72011 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "8"; scaffold_2283 StringTie exon 72369 72454 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "9"; scaffold_2283 StringTie exon 72569 72673 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "10"; scaffold_2283 StringTie exon 72797 72872 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "11"; scaffold_2283 StringTie exon 73069 73187 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "12"; scaffold_2283 StringTie exon 73516 73599 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "13"; scaffold_2283 StringTie exon 73708 73765 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "14"; scaffold_2283 StringTie exon 74816 74997 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "15"; scaffold_2283 StringTie exon 75101 75669 1000 + . gene_id "MSTRG.48342"; transcript_id "MSTRG.48342.1"; exon_number "16"; scaffold_2284 StringTie exon 101883 102380 1000 . . gene_id "MSTRG.48364"; transcript_id "MSTRG.48364.1"; exon_number "1"; scaffold_2285 StringTie exon 52484 52701 1000 . . gene_id "MSTRG.48373"; transcript_id "MSTRG.48373.1"; exon_number "1"; scaffold_2285 StringTie exon 56886 56987 1000 - . gene_id "MSTRG.48375"; transcript_id "MSTRG.48375.1"; exon_number "1"; scaffold_2285 StringTie exon 58730 58828 1000 - . gene_id "MSTRG.48375"; transcript_id "MSTRG.48375.1"; exon_number "2"; scaffold_2285 StringTie exon 58967 59089 1000 - . gene_id "MSTRG.48375"; transcript_id "MSTRG.48375.1"; exon_number "3"; scaffold_2285 StringTie exon 59211 59380 1000 - . gene_id "MSTRG.48375"; transcript_id "MSTRG.48375.1"; exon_number "4"; scaffold_2285 StringTie exon 60314 60502 1000 - . gene_id "MSTRG.48375"; transcript_id "MSTRG.48375.1"; exon_number "5"; scaffold_2285 StringTie exon 64030 64151 1000 - . gene_id "MSTRG.48375"; transcript_id "MSTRG.48375.1"; exon_number "6"; scaffold_2285 StringTie exon 70935 71061 1000 - . gene_id "MSTRG.48375"; transcript_id "MSTRG.48375.1"; exon_number "7"; scaffold_2285 StringTie exon 72426 73071 1000 - . gene_id "MSTRG.48375"; transcript_id "MSTRG.48375.1"; exon_number "8"; scaffold_2285 StringTie exon 100407 100952 1000 . . gene_id "MSTRG.48389"; transcript_id "MSTRG.48389.1"; exon_number "1"; scaffold_2286 StringTie exon 18758 19195 1000 . . gene_id "MSTRG.48402"; transcript_id "MSTRG.48402.1"; exon_number "1"; scaffold_2286 StringTie exon 19516 19750 1000 . . gene_id "MSTRG.48403"; transcript_id "MSTRG.48403.1"; exon_number "1"; scaffold_2287 StringTie exon 55122 55583 1000 . . gene_id "MSTRG.48424"; transcript_id "MSTRG.48424.1"; exon_number "1"; scaffold_2287 StringTie exon 58404 59522 1000 . . gene_id "MSTRG.48425"; transcript_id "MSTRG.48425.1"; exon_number "1"; scaffold_22870 StringTie exon 607 894 1000 . . gene_id "MSTRG.48431"; transcript_id "MSTRG.48431.1"; exon_number "1"; scaffold_2289 StringTie exon 796 832 1000 + . gene_id "MSTRG.48457"; transcript_id "MSTRG.48457.1"; exon_number "1"; scaffold_2289 StringTie exon 3609 3700 1000 + . gene_id "MSTRG.48457"; transcript_id "MSTRG.48457.1"; exon_number "2"; scaffold_2289 StringTie exon 5765 5879 1000 + . gene_id "MSTRG.48457"; transcript_id "MSTRG.48457.1"; exon_number "3"; scaffold_2289 StringTie exon 6956 7032 1000 + . gene_id "MSTRG.48457"; transcript_id "MSTRG.48457.1"; exon_number "4"; scaffold_2289 StringTie exon 8235 8308 1000 + . gene_id "MSTRG.48457"; transcript_id "MSTRG.48457.1"; exon_number "5"; scaffold_229 StringTie exon 994950 995494 1000 . . gene_id "MSTRG.48527"; transcript_id "MSTRG.48527.1"; exon_number "1"; scaffold_2291 StringTie exon 55997 56196 1000 . . gene_id "MSTRG.48554"; transcript_id "MSTRG.48554.1"; exon_number "1"; scaffold_2292 StringTie exon 38899 39229 1000 . . gene_id "MSTRG.48566"; transcript_id "MSTRG.48566.1"; exon_number "1"; scaffold_2292 StringTie exon 77562 77790 1000 . . gene_id "MSTRG.48568"; transcript_id "MSTRG.48568.1"; exon_number "1"; scaffold_2293 StringTie exon 34576 35142 1000 . . gene_id "MSTRG.48576"; transcript_id "MSTRG.48576.1"; exon_number "1"; scaffold_2295 StringTie exon 16041 16273 1000 . . gene_id "MSTRG.48609"; transcript_id "MSTRG.48609.1"; exon_number "1"; scaffold_2295 StringTie exon 39673 39945 1000 . . gene_id "MSTRG.48611"; transcript_id "MSTRG.48611.1"; exon_number "1"; scaffold_22950 StringTie exon 2686 2858 1000 + . gene_id "MSTRG.48616"; transcript_id "MSTRG.48616.1"; exon_number "1"; scaffold_22950 StringTie exon 3498 4217 1000 + . gene_id "MSTRG.48616"; transcript_id "MSTRG.48616.1"; exon_number "2"; scaffold_22958 StringTie exon 4852 5111 1000 . . gene_id "MSTRG.48617"; transcript_id "MSTRG.48617.1"; exon_number "1"; scaffold_23 StringTie exon 193757 194399 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "1"; scaffold_23 StringTie exon 194591 194737 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "2"; scaffold_23 StringTie exon 195061 195148 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "3"; scaffold_23 StringTie exon 195263 195455 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "4"; scaffold_23 StringTie exon 195604 195801 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "5"; scaffold_23 StringTie exon 195993 196098 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "6"; scaffold_23 StringTie exon 196340 196496 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "7"; scaffold_23 StringTie exon 196714 196833 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "8"; scaffold_23 StringTie exon 196997 197295 1000 - . gene_id "MSTRG.48691"; transcript_id "MSTRG.48691.1"; exon_number "9"; scaffold_23 StringTie exon 350972 353050 1000 . . gene_id "MSTRG.48700"; transcript_id "MSTRG.48700.1"; exon_number "1"; scaffold_23 StringTie exon 873717 874188 1000 . . gene_id "MSTRG.48723"; transcript_id "MSTRG.48723.1"; exon_number "1"; scaffold_23 StringTie exon 911428 911572 1000 + . gene_id "MSTRG.48728"; transcript_id "MSTRG.48728.1"; exon_number "1"; scaffold_23 StringTie exon 912398 912558 1000 + . gene_id "MSTRG.48728"; transcript_id "MSTRG.48728.1"; exon_number "2"; scaffold_23 StringTie exon 1151019 1151397 1000 . . gene_id "MSTRG.48746"; transcript_id "MSTRG.48746.1"; exon_number "1"; scaffold_23 StringTie exon 1168505 1168730 1000 . . gene_id "MSTRG.48748"; transcript_id "MSTRG.48748.1"; exon_number "1"; scaffold_23 StringTie exon 1349730 1349764 1000 + . gene_id "MSTRG.48759"; transcript_id "MSTRG.48759.1"; exon_number "1"; scaffold_23 StringTie exon 1349865 1349994 1000 + . gene_id "MSTRG.48759"; transcript_id "MSTRG.48759.1"; exon_number "2"; scaffold_23 StringTie exon 1350508 1350604 1000 + . gene_id "MSTRG.48759"; transcript_id "MSTRG.48759.1"; exon_number "3"; scaffold_23 StringTie exon 1383360 1383683 1000 . . gene_id "MSTRG.48767"; transcript_id "MSTRG.48767.1"; exon_number "1"; scaffold_23 StringTie exon 1707260 1707458 1000 + . gene_id "MSTRG.48785"; transcript_id "MSTRG.48785.1"; exon_number "1"; scaffold_23 StringTie exon 1707548 1707604 1000 + . gene_id "MSTRG.48785"; transcript_id "MSTRG.48785.1"; exon_number "2"; scaffold_23 StringTie exon 1709598 1709633 1000 + . gene_id "MSTRG.48785"; transcript_id "MSTRG.48785.1"; exon_number "3"; scaffold_23 StringTie exon 2251705 2252008 1000 . . gene_id "MSTRG.48809"; transcript_id "MSTRG.48809.1"; exon_number "1"; scaffold_23 StringTie exon 2332260 2332329 1000 + . gene_id "MSTRG.48817"; transcript_id "MSTRG.48817.1"; exon_number "1"; scaffold_23 StringTie exon 2332499 2332700 1000 + . gene_id "MSTRG.48817"; transcript_id "MSTRG.48817.1"; exon_number "2"; scaffold_23 StringTie exon 2503283 2503521 1000 . . gene_id "MSTRG.48837"; transcript_id "MSTRG.48837.1"; exon_number "1"; scaffold_23 StringTie exon 2526812 2527188 1000 . . gene_id "MSTRG.48842"; transcript_id "MSTRG.48842.1"; exon_number "1"; scaffold_230 StringTie exon 40939 41154 1000 . . gene_id "MSTRG.48852"; transcript_id "MSTRG.48852.1"; exon_number "1"; scaffold_230 StringTie exon 275808 276166 1000 . . gene_id "MSTRG.48864"; transcript_id "MSTRG.48864.1"; exon_number "1"; scaffold_230 StringTie exon 361862 362244 1000 . . gene_id "MSTRG.48866"; transcript_id "MSTRG.48866.1"; exon_number "1"; scaffold_230 StringTie exon 812782 813138 1000 . . gene_id "MSTRG.48897"; transcript_id "MSTRG.48897.1"; exon_number "1"; scaffold_23004 StringTie exon 4439 4707 1000 . . gene_id "MSTRG.48931"; transcript_id "MSTRG.48931.1"; exon_number "1"; scaffold_2301 StringTie exon 81655 81921 1000 . . gene_id "MSTRG.48935"; transcript_id "MSTRG.48935.1"; exon_number "1"; scaffold_23050 StringTie exon 3475 3700 1000 . . gene_id "MSTRG.48984"; transcript_id "MSTRG.48984.1"; exon_number "1"; scaffold_23068 StringTie exon 1107 1314 1000 . . gene_id "MSTRG.49000"; transcript_id "MSTRG.49000.1"; exon_number "1"; scaffold_2307 StringTie exon 14163 14244 1000 + . gene_id "MSTRG.49006"; transcript_id "MSTRG.49006.1"; exon_number "1"; scaffold_2307 StringTie exon 14381 14583 1000 + . gene_id "MSTRG.49006"; transcript_id "MSTRG.49006.1"; exon_number "2"; scaffold_2307 StringTie exon 14737 14848 1000 + . gene_id "MSTRG.49006"; transcript_id "MSTRG.49006.1"; exon_number "3"; scaffold_2307 StringTie exon 15043 15300 1000 + . gene_id "MSTRG.49006"; transcript_id "MSTRG.49006.1"; exon_number "4"; scaffold_2307 StringTie exon 15544 15734 1000 + . gene_id "MSTRG.49006"; transcript_id "MSTRG.49006.1"; exon_number "5"; scaffold_2307 StringTie exon 15915 16053 1000 + . gene_id "MSTRG.49006"; transcript_id "MSTRG.49006.1"; exon_number "6"; scaffold_2307 StringTie exon 16305 16439 1000 + . gene_id "MSTRG.49006"; transcript_id "MSTRG.49006.1"; exon_number "7"; scaffold_2307 StringTie exon 16597 16829 1000 + . gene_id "MSTRG.49006"; transcript_id "MSTRG.49006.1"; exon_number "8"; scaffold_2307 StringTie exon 39646 41632 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "1"; scaffold_2307 StringTie exon 43038 43087 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "2"; scaffold_2307 StringTie exon 43218 43352 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "3"; scaffold_2307 StringTie exon 43474 43621 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "4"; scaffold_2307 StringTie exon 44203 44395 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "5"; scaffold_2307 StringTie exon 44918 45046 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "6"; scaffold_2307 StringTie exon 45139 45328 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "7"; scaffold_2307 StringTie exon 45935 46130 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "8"; scaffold_2307 StringTie exon 56350 56410 1000 - . gene_id "MSTRG.49010"; transcript_id "MSTRG.49010.1"; exon_number "9"; scaffold_231 StringTie exon 30742 31412 1000 . . gene_id "MSTRG.49047"; transcript_id "MSTRG.49047.1"; exon_number "1"; scaffold_231 StringTie exon 247972 248444 1000 . . gene_id "MSTRG.49066"; transcript_id "MSTRG.49066.1"; exon_number "1"; scaffold_231 StringTie exon 283895 285521 1000 - . gene_id "MSTRG.49070"; transcript_id "MSTRG.49070.1"; exon_number "1"; scaffold_231 StringTie exon 680021 680298 1000 . . gene_id "MSTRG.49095"; transcript_id "MSTRG.49095.1"; exon_number "1"; scaffold_231 StringTie exon 702015 702234 1000 . . gene_id "MSTRG.49097"; transcript_id "MSTRG.49097.1"; exon_number "1"; scaffold_231 StringTie exon 860492 860723 1000 . . gene_id "MSTRG.49118"; transcript_id "MSTRG.49118.1"; exon_number "1"; scaffold_231 StringTie exon 897955 898242 1000 . . gene_id "MSTRG.49119"; transcript_id "MSTRG.49119.1"; exon_number "1"; scaffold_231 StringTie exon 919487 919857 1000 . . gene_id "MSTRG.49123"; transcript_id "MSTRG.49123.1"; exon_number "1"; scaffold_231 StringTie exon 1019202 1019460 1000 . . gene_id "MSTRG.49132"; transcript_id "MSTRG.49132.1"; exon_number "1"; scaffold_2310 StringTie exon 33700 34195 1000 . . gene_id "MSTRG.49146"; transcript_id "MSTRG.49146.1"; exon_number "1"; scaffold_23108 StringTie exon 259 1326 1000 . . gene_id "MSTRG.49160"; transcript_id "MSTRG.49160.1"; exon_number "1"; scaffold_23112 StringTie exon 5867 6348 1000 . . gene_id "MSTRG.49169"; transcript_id "MSTRG.49169.1"; exon_number "1"; scaffold_2312 StringTie exon 88856 89080 1000 . . gene_id "MSTRG.49178"; transcript_id "MSTRG.49178.1"; exon_number "1"; scaffold_23122 StringTie exon 749 1043 1000 . . gene_id "MSTRG.49181"; transcript_id "MSTRG.49181.1"; exon_number "1"; scaffold_2313 StringTie exon 2635 2835 1000 . . gene_id "MSTRG.49190"; transcript_id "MSTRG.49190.1"; exon_number "1"; scaffold_2313 StringTie exon 8715 9049 1000 . . gene_id "MSTRG.49191"; transcript_id "MSTRG.49191.1"; exon_number "1"; scaffold_2313 StringTie exon 105003 105249 1000 . . gene_id "MSTRG.49194"; transcript_id "MSTRG.49194.1"; exon_number "1"; scaffold_23149 StringTie exon 2017 2340 1000 . . gene_id "MSTRG.49216"; transcript_id "MSTRG.49216.1"; exon_number "1"; scaffold_23154 StringTie exon 3272 3476 1000 . . gene_id "MSTRG.49239"; transcript_id "MSTRG.49239.1"; exon_number "1"; scaffold_2316 StringTie exon 85564 85769 1000 . . gene_id "MSTRG.49242"; transcript_id "MSTRG.49242.1"; exon_number "1"; scaffold_23166 StringTie exon 3391 3685 1000 + . gene_id "MSTRG.49250"; transcript_id "MSTRG.49250.1"; exon_number "1"; scaffold_23166 StringTie exon 3939 4107 1000 + . gene_id "MSTRG.49250"; transcript_id "MSTRG.49250.1"; exon_number "2"; scaffold_23166 StringTie exon 4239 4431 1000 + . gene_id "MSTRG.49250"; transcript_id "MSTRG.49250.1"; exon_number "3"; scaffold_23182 StringTie exon 1814 2703 1000 . . gene_id "MSTRG.49272"; transcript_id "MSTRG.49272.1"; exon_number "1"; scaffold_2319 StringTie exon 57216 57435 1000 . . gene_id "MSTRG.49287"; transcript_id "MSTRG.49287.1"; exon_number "1"; scaffold_232 StringTie exon 54728 55109 1000 . . gene_id "MSTRG.49301"; transcript_id "MSTRG.49301.1"; exon_number "1"; scaffold_232 StringTie exon 210687 210819 1000 - . gene_id "MSTRG.49314"; transcript_id "MSTRG.49314.1"; exon_number "1"; scaffold_232 StringTie exon 211205 211277 1000 - . gene_id "MSTRG.49314"; transcript_id "MSTRG.49314.1"; exon_number "2"; scaffold_232 StringTie exon 211573 211621 1000 - . gene_id "MSTRG.49314"; transcript_id "MSTRG.49314.1"; exon_number "3"; scaffold_232 StringTie exon 211810 211866 1000 - . gene_id "MSTRG.49314"; transcript_id "MSTRG.49314.1"; exon_number "4"; scaffold_232 StringTie exon 212887 212930 1000 - . gene_id "MSTRG.49314"; transcript_id "MSTRG.49314.1"; exon_number "5"; scaffold_232 StringTie exon 321131 321406 1000 . . gene_id "MSTRG.49326"; transcript_id "MSTRG.49326.1"; exon_number "1"; scaffold_232 StringTie exon 331036 331251 1000 . . gene_id "MSTRG.49327"; transcript_id "MSTRG.49327.1"; exon_number "1"; scaffold_232 StringTie exon 421717 422974 1000 . . gene_id "MSTRG.49337"; transcript_id "MSTRG.49337.1"; exon_number "1"; scaffold_2321 StringTie exon 35052 35111 1000 - . gene_id "MSTRG.49416"; transcript_id "MSTRG.49416.1"; exon_number "1"; scaffold_2321 StringTie exon 36703 36815 1000 - . gene_id "MSTRG.49416"; transcript_id "MSTRG.49416.1"; exon_number "2"; scaffold_2321 StringTie exon 45183 45306 1000 - . gene_id "MSTRG.49416"; transcript_id "MSTRG.49416.1"; exon_number "3"; scaffold_2322 StringTie exon 75970 76161 1000 - . gene_id "MSTRG.49441"; transcript_id "MSTRG.49441.2"; exon_number "1"; scaffold_2322 StringTie exon 77709 77747 1000 - . gene_id "MSTRG.49441"; transcript_id "MSTRG.49441.2"; exon_number "2"; scaffold_2323 StringTie exon 22998 23041 1000 - . gene_id "MSTRG.49451"; transcript_id "MSTRG.49451.2"; exon_number "1"; scaffold_2323 StringTie exon 23140 23380 1000 - . gene_id "MSTRG.49451"; transcript_id "MSTRG.49451.2"; exon_number "2"; scaffold_2323 StringTie exon 23507 23552 1000 - . gene_id "MSTRG.49451"; transcript_id "MSTRG.49451.2"; exon_number "3"; scaffold_23230 StringTie exon 2106 2165 1000 + . gene_id "MSTRG.49458"; transcript_id "MSTRG.49458.1"; exon_number "1"; scaffold_23230 StringTie exon 2365 2515 1000 + . gene_id "MSTRG.49458"; transcript_id "MSTRG.49458.1"; exon_number "2"; scaffold_2324 StringTie exon 88803 89419 1000 - . gene_id "MSTRG.49471"; transcript_id "MSTRG.49471.1"; exon_number "1"; scaffold_2324 StringTie exon 89702 90210 1000 - . gene_id "MSTRG.49471"; transcript_id "MSTRG.49471.1"; exon_number "2"; scaffold_2324 StringTie exon 90691 91270 1000 - . gene_id "MSTRG.49471"; transcript_id "MSTRG.49471.1"; exon_number "3"; scaffold_23259 StringTie exon 6148 6372 1000 + . gene_id "MSTRG.49489"; transcript_id "MSTRG.49489.1"; exon_number "1"; scaffold_2327 StringTie exon 10 211 1000 - . gene_id "MSTRG.49503"; transcript_id "MSTRG.49503.1"; exon_number "1"; scaffold_23279 StringTie exon 3147 3390 1000 . . gene_id "MSTRG.49514"; transcript_id "MSTRG.49514.1"; exon_number "1"; scaffold_2328 StringTie exon 4728 4930 1000 - . gene_id "MSTRG.49517"; transcript_id "MSTRG.49517.1"; exon_number "1"; scaffold_2328 StringTie exon 6000 6121 1000 - . gene_id "MSTRG.49517"; transcript_id "MSTRG.49517.1"; exon_number "2"; scaffold_2328 StringTie exon 88021 88287 1000 . . gene_id "MSTRG.49522"; transcript_id "MSTRG.49522.1"; exon_number "1"; scaffold_233 StringTie exon 83625 83848 1000 . . gene_id "MSTRG.49542"; transcript_id "MSTRG.49542.1"; exon_number "1"; scaffold_233 StringTie exon 244292 244634 1000 . . gene_id "MSTRG.49547"; transcript_id "MSTRG.49547.1"; exon_number "1"; scaffold_233 StringTie exon 263388 263633 1000 . . gene_id "MSTRG.49550"; transcript_id "MSTRG.49550.1"; exon_number "1"; scaffold_233 StringTie exon 593964 594734 1000 . . gene_id "MSTRG.49569"; transcript_id "MSTRG.49569.1"; exon_number "1"; scaffold_233 StringTie exon 951023 951283 1000 . . gene_id "MSTRG.49581"; transcript_id "MSTRG.49581.1"; exon_number "1"; scaffold_23308 StringTie exon 1377 1586 1000 . . gene_id "MSTRG.49600"; transcript_id "MSTRG.49600.1"; exon_number "1"; scaffold_2332 StringTie exon 53685 53895 1000 . . gene_id "MSTRG.49611"; transcript_id "MSTRG.49611.1"; exon_number "1"; scaffold_2332 StringTie exon 82162 82294 1000 + . gene_id "MSTRG.49615"; transcript_id "MSTRG.49615.1"; exon_number "1"; scaffold_2332 StringTie exon 82643 82830 1000 + . gene_id "MSTRG.49615"; transcript_id "MSTRG.49615.1"; exon_number "2"; scaffold_2333 StringTie exon 52062 52329 1000 . . gene_id "MSTRG.49629"; transcript_id "MSTRG.49629.1"; exon_number "1"; scaffold_23335 StringTie exon 837 1229 1000 . . gene_id "MSTRG.49636"; transcript_id "MSTRG.49636.1"; exon_number "1"; scaffold_2334 StringTie exon 67316 67567 1000 . . gene_id "MSTRG.49642"; transcript_id "MSTRG.49642.1"; exon_number "1"; scaffold_23358 StringTie exon 142 305 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "1"; scaffold_23358 StringTie exon 492 791 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "2"; scaffold_23358 StringTie exon 2421 2738 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "3"; scaffold_23358 StringTie exon 2948 3244 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "4"; scaffold_23358 StringTie exon 3348 3647 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "5"; scaffold_23358 StringTie exon 3746 4060 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "6"; scaffold_23358 StringTie exon 4301 4590 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "7"; scaffold_23358 StringTie exon 4737 4887 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "8"; scaffold_23358 StringTie exon 5075 5356 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "9"; scaffold_23358 StringTie exon 5575 5877 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "10"; scaffold_23358 StringTie exon 6005 6310 1000 + . gene_id "MSTRG.49664"; transcript_id "MSTRG.49664.1"; exon_number "11"; scaffold_23359 StringTie exon 267 548 1000 . . gene_id "MSTRG.49665"; transcript_id "MSTRG.49665.1"; exon_number "1"; scaffold_23364 StringTie exon 2029 2576 1000 . . gene_id "MSTRG.49674"; transcript_id "MSTRG.49674.1"; exon_number "1"; scaffold_23379 StringTie exon 1031 1343 1000 . . gene_id "MSTRG.49689"; transcript_id "MSTRG.49689.1"; exon_number "1"; scaffold_2338 StringTie exon 104212 104628 1000 . . gene_id "MSTRG.49706"; transcript_id "MSTRG.49706.1"; exon_number "1"; scaffold_23389 StringTie exon 3232 3317 1000 + . gene_id "MSTRG.49710"; transcript_id "MSTRG.49710.1"; exon_number "1"; scaffold_23389 StringTie exon 4125 4250 1000 + . gene_id "MSTRG.49710"; transcript_id "MSTRG.49710.1"; exon_number "2"; scaffold_2339 StringTie exon 35359 35713 1000 . . gene_id "MSTRG.49713"; transcript_id "MSTRG.49713.1"; exon_number "1"; scaffold_2339 StringTie exon 90002 90233 1000 . . gene_id "MSTRG.49719"; transcript_id "MSTRG.49719.1"; exon_number "1"; scaffold_23399 StringTie exon 1462 1493 1000 - . gene_id "MSTRG.49724"; transcript_id "MSTRG.49724.1"; exon_number "1"; scaffold_23399 StringTie exon 1590 1766 1000 - . gene_id "MSTRG.49724"; transcript_id "MSTRG.49724.1"; exon_number "2"; scaffold_23399 StringTie exon 1982 2097 1000 - . gene_id "MSTRG.49724"; transcript_id "MSTRG.49724.1"; exon_number "3"; scaffold_234 StringTie exon 42056 42265 1000 . . gene_id "MSTRG.49726"; transcript_id "MSTRG.49726.1"; exon_number "1"; scaffold_234 StringTie exon 595907 596182 1000 . . gene_id "MSTRG.49772"; transcript_id "MSTRG.49772.1"; exon_number "1"; scaffold_234 StringTie exon 967477 967982 1000 . . gene_id "MSTRG.49790"; transcript_id "MSTRG.49790.1"; exon_number "1"; scaffold_234 StringTie exon 1159009 1159223 1000 . . gene_id "MSTRG.49799"; transcript_id "MSTRG.49799.1"; exon_number "1"; scaffold_2340 StringTie exon 77553 77764 1000 . . gene_id "MSTRG.49810"; transcript_id "MSTRG.49810.1"; exon_number "1"; scaffold_2341 StringTie exon 2440 3060 1000 . . gene_id "MSTRG.49814"; transcript_id "MSTRG.49814.1"; exon_number "1"; scaffold_23410 StringTie exon 4020 4295 1000 . . gene_id "MSTRG.49817"; transcript_id "MSTRG.49817.1"; exon_number "1"; scaffold_23417 StringTie exon 1539 1903 1000 . . gene_id "MSTRG.49821"; transcript_id "MSTRG.49821.1"; exon_number "1"; scaffold_23418 StringTie exon 5576 6205 1000 . . gene_id "MSTRG.49822"; transcript_id "MSTRG.49822.1"; exon_number "1"; scaffold_2342 StringTie exon 36878 37919 1000 . . gene_id "MSTRG.49827"; transcript_id "MSTRG.49827.1"; exon_number "1"; scaffold_2343 StringTie exon 19231 19380 1000 - . gene_id "MSTRG.49844"; transcript_id "MSTRG.49844.1"; exon_number "1"; scaffold_2343 StringTie exon 19613 19694 1000 - . gene_id "MSTRG.49844"; transcript_id "MSTRG.49844.1"; exon_number "2"; scaffold_2343 StringTie exon 103978 104530 1000 . . gene_id "MSTRG.49851"; transcript_id "MSTRG.49851.1"; exon_number "1"; scaffold_2344 StringTie exon 100693 100916 1000 . . gene_id "MSTRG.49859"; transcript_id "MSTRG.49859.1"; exon_number "1"; scaffold_23456 StringTie exon 1836 2947 1000 . . gene_id "MSTRG.49880"; transcript_id "MSTRG.49880.1"; exon_number "1"; scaffold_23465 StringTie exon 823 1153 1000 . . gene_id "MSTRG.49896"; transcript_id "MSTRG.49896.1"; exon_number "1"; scaffold_2348 StringTie exon 8058 8426 1000 . . gene_id "MSTRG.49923"; transcript_id "MSTRG.49923.1"; exon_number "1"; scaffold_235 StringTie exon 134343 134615 1000 . . gene_id "MSTRG.49953"; transcript_id "MSTRG.49953.1"; exon_number "1"; scaffold_235 StringTie exon 286340 286547 1000 . . gene_id "MSTRG.49980"; transcript_id "MSTRG.49980.1"; exon_number "1"; scaffold_235 StringTie exon 436373 436646 1000 . . gene_id "MSTRG.49984"; transcript_id "MSTRG.49984.1"; exon_number "1"; scaffold_235 StringTie exon 498254 499245 1000 - . gene_id "MSTRG.49992"; transcript_id "MSTRG.49992.1"; exon_number "1"; scaffold_235 StringTie exon 524958 525182 1000 . . gene_id "MSTRG.50005"; transcript_id "MSTRG.50005.1"; exon_number "1"; scaffold_235 StringTie exon 683774 683905 1000 - . gene_id "MSTRG.50012"; transcript_id "MSTRG.50012.1"; exon_number "1"; scaffold_235 StringTie exon 683995 684090 1000 - . gene_id "MSTRG.50012"; transcript_id "MSTRG.50012.1"; exon_number "2"; scaffold_235 StringTie exon 735192 735710 1000 . . gene_id "MSTRG.50014"; transcript_id "MSTRG.50014.1"; exon_number "1"; scaffold_235 StringTie exon 1081655 1081682 1000 + . gene_id "MSTRG.50032"; transcript_id "MSTRG.50032.2"; exon_number "1"; scaffold_235 StringTie exon 1082131 1082237 1000 + . gene_id "MSTRG.50032"; transcript_id "MSTRG.50032.2"; exon_number "2"; scaffold_235 StringTie exon 1082442 1082533 1000 + . gene_id "MSTRG.50032"; transcript_id "MSTRG.50032.2"; exon_number "3"; scaffold_235 StringTie exon 1082754 1082949 1000 + . gene_id "MSTRG.50032"; transcript_id "MSTRG.50032.2"; exon_number "4"; scaffold_235 StringTie exon 1083205 1083363 1000 + . gene_id "MSTRG.50032"; transcript_id "MSTRG.50032.2"; exon_number "5"; scaffold_235 StringTie exon 1083563 1083730 1000 + . gene_id "MSTRG.50032"; transcript_id "MSTRG.50032.2"; exon_number "6"; scaffold_235 StringTie exon 1083850 1084035 1000 + . gene_id "MSTRG.50032"; transcript_id "MSTRG.50032.2"; exon_number "7"; scaffold_235 StringTie exon 1084150 1084221 1000 + . gene_id "MSTRG.50032"; transcript_id "MSTRG.50032.2"; exon_number "8"; scaffold_235 StringTie exon 1107236 1107440 1000 . . gene_id "MSTRG.50036"; transcript_id "MSTRG.50036.1"; exon_number "1"; scaffold_2352 StringTie exon 13713 13942 1000 . . gene_id "MSTRG.50058"; transcript_id "MSTRG.50058.1"; exon_number "1"; scaffold_23529 StringTie exon 1238 1269 1000 + . gene_id "MSTRG.50069"; transcript_id "MSTRG.50069.1"; exon_number "1"; scaffold_23529 StringTie exon 1409 1604 1000 + . gene_id "MSTRG.50069"; transcript_id "MSTRG.50069.1"; exon_number "2"; scaffold_2353 StringTie exon 14039 14510 1000 . . gene_id "MSTRG.50072"; transcript_id "MSTRG.50072.1"; exon_number "1"; scaffold_2353 StringTie exon 56865 57278 1000 . . gene_id "MSTRG.50075"; transcript_id "MSTRG.50075.1"; exon_number "1"; scaffold_2355 StringTie exon 7964 8281 1000 . . gene_id "MSTRG.50092"; transcript_id "MSTRG.50092.1"; exon_number "1"; scaffold_2355 StringTie exon 97688 97911 1000 . . gene_id "MSTRG.50099"; transcript_id "MSTRG.50099.1"; exon_number "1"; scaffold_2356 StringTie exon 36489 36625 1000 + . gene_id "MSTRG.50112"; transcript_id "MSTRG.50112.1"; exon_number "1"; scaffold_2356 StringTie exon 36763 36822 1000 + . gene_id "MSTRG.50112"; transcript_id "MSTRG.50112.1"; exon_number "2"; scaffold_2356 StringTie exon 36964 37077 1000 + . gene_id "MSTRG.50112"; transcript_id "MSTRG.50112.1"; exon_number "3"; scaffold_2356 StringTie exon 93575 93845 1000 . . gene_id "MSTRG.50117"; transcript_id "MSTRG.50117.1"; exon_number "1"; scaffold_236 StringTie exon 1416 1654 1000 . . gene_id "MSTRG.50162"; transcript_id "MSTRG.50162.1"; exon_number "1"; scaffold_236 StringTie exon 135596 135854 1000 . . gene_id "MSTRG.50172"; transcript_id "MSTRG.50172.1"; exon_number "1"; scaffold_236 StringTie exon 668930 669494 1000 - . gene_id "MSTRG.50207"; transcript_id "MSTRG.50207.1"; exon_number "1"; scaffold_236 StringTie exon 677148 677475 1000 - . gene_id "MSTRG.50207"; transcript_id "MSTRG.50207.1"; exon_number "2"; scaffold_236 StringTie exon 1019739 1019986 1000 . . gene_id "MSTRG.50224"; transcript_id "MSTRG.50224.1"; exon_number "1"; scaffold_2361 StringTie exon 76538 76783 1000 . . gene_id "MSTRG.50246"; transcript_id "MSTRG.50246.1"; exon_number "1"; scaffold_2362 StringTie exon 91995 92769 1000 . . gene_id "MSTRG.50256"; transcript_id "MSTRG.50256.1"; exon_number "1"; scaffold_2362 StringTie exon 95934 96118 1000 + . gene_id "MSTRG.50257"; transcript_id "MSTRG.50257.2"; exon_number "1"; scaffold_2362 StringTie exon 99211 99402 1000 + . gene_id "MSTRG.50257"; transcript_id "MSTRG.50257.2"; exon_number "2"; scaffold_2362 StringTie exon 99513 99587 1000 + . gene_id "MSTRG.50257"; transcript_id "MSTRG.50257.2"; exon_number "3"; scaffold_2362 StringTie exon 99726 99827 1000 + . gene_id "MSTRG.50257"; transcript_id "MSTRG.50257.2"; exon_number "4"; scaffold_2362 StringTie exon 99958 100109 1000 + . gene_id "MSTRG.50257"; transcript_id "MSTRG.50257.2"; exon_number "5"; scaffold_2362 StringTie exon 100946 101029 1000 + . gene_id "MSTRG.50257"; transcript_id "MSTRG.50257.2"; exon_number "6"; scaffold_2362 StringTie exon 102031 103128 1000 + . gene_id "MSTRG.50257"; transcript_id "MSTRG.50257.2"; exon_number "7"; scaffold_23636 StringTie exon 2490 2809 1000 . . gene_id "MSTRG.50272"; transcript_id "MSTRG.50272.1"; exon_number "1"; scaffold_2364 StringTie exon 73503 73798 1000 . . gene_id "MSTRG.50278"; transcript_id "MSTRG.50278.1"; exon_number "1"; scaffold_2366 StringTie exon 47764 47980 1000 - . gene_id "MSTRG.50302"; transcript_id "MSTRG.50302.1"; exon_number "1"; scaffold_2366 StringTie exon 48326 48382 1000 - . gene_id "MSTRG.50302"; transcript_id "MSTRG.50302.1"; exon_number "2"; scaffold_23664 StringTie exon 5539 5747 1000 . . gene_id "MSTRG.50305"; transcript_id "MSTRG.50305.1"; exon_number "1"; scaffold_2368 StringTie exon 38019 38258 1000 . . gene_id "MSTRG.50323"; transcript_id "MSTRG.50323.1"; exon_number "1"; scaffold_2369 StringTie exon 82100 82251 1000 - . gene_id "MSTRG.50338"; transcript_id "MSTRG.50338.1"; exon_number "1"; scaffold_2369 StringTie exon 85990 86244 1000 - . gene_id "MSTRG.50338"; transcript_id "MSTRG.50338.1"; exon_number "2"; scaffold_2369 StringTie exon 86461 86612 1000 - . gene_id "MSTRG.50338"; transcript_id "MSTRG.50338.1"; exon_number "3"; scaffold_237 StringTie exon 21357 21626 1000 . . gene_id "MSTRG.50345"; transcript_id "MSTRG.50345.1"; exon_number "1"; scaffold_237 StringTie exon 70593 70829 1000 - . gene_id "MSTRG.50346"; transcript_id "MSTRG.50346.2"; exon_number "1"; scaffold_237 StringTie exon 73314 73479 1000 - . gene_id "MSTRG.50346"; transcript_id "MSTRG.50346.2"; exon_number "2"; scaffold_237 StringTie exon 92998 93086 1000 - . gene_id "MSTRG.50346"; transcript_id "MSTRG.50346.2"; exon_number "3"; scaffold_237 StringTie exon 100486 100569 1000 - . gene_id "MSTRG.50346"; transcript_id "MSTRG.50346.2"; exon_number "4"; scaffold_237 StringTie exon 475078 475401 1000 . . gene_id "MSTRG.50358"; transcript_id "MSTRG.50358.1"; exon_number "1"; scaffold_237 StringTie exon 491539 491895 1000 . . gene_id "MSTRG.50359"; transcript_id "MSTRG.50359.1"; exon_number "1"; scaffold_237 StringTie exon 604688 604938 1000 . . gene_id "MSTRG.50362"; transcript_id "MSTRG.50362.1"; exon_number "1"; scaffold_237 StringTie exon 655818 655911 1000 - . gene_id "MSTRG.50369"; transcript_id "MSTRG.50369.1"; exon_number "1"; scaffold_237 StringTie exon 656070 656181 1000 - . gene_id "MSTRG.50369"; transcript_id "MSTRG.50369.1"; exon_number "2"; scaffold_237 StringTie exon 656273 656433 1000 - . gene_id "MSTRG.50369"; transcript_id "MSTRG.50369.1"; exon_number "3"; scaffold_237 StringTie exon 656567 656610 1000 - . gene_id "MSTRG.50369"; transcript_id "MSTRG.50369.1"; exon_number "4"; scaffold_237 StringTie exon 656727 656799 1000 - . gene_id "MSTRG.50369"; transcript_id "MSTRG.50369.1"; exon_number "5"; scaffold_237 StringTie exon 656993 657058 1000 - . gene_id "MSTRG.50369"; transcript_id "MSTRG.50369.1"; exon_number "6"; scaffold_237 StringTie exon 657214 657255 1000 - . gene_id "MSTRG.50369"; transcript_id "MSTRG.50369.1"; exon_number "7"; scaffold_237 StringTie exon 693603 693945 1000 . . gene_id "MSTRG.50378"; transcript_id "MSTRG.50378.1"; exon_number "1"; scaffold_237 StringTie exon 999824 1000030 1000 + . gene_id "MSTRG.50397"; transcript_id "MSTRG.50397.1"; exon_number "1"; scaffold_237 StringTie exon 1000326 1000402 1000 + . gene_id "MSTRG.50397"; transcript_id "MSTRG.50397.1"; exon_number "2"; scaffold_237 StringTie exon 1000543 1000621 1000 + . gene_id "MSTRG.50397"; transcript_id "MSTRG.50397.1"; exon_number "3"; scaffold_237 StringTie exon 1001685 1001778 1000 + . gene_id "MSTRG.50397"; transcript_id "MSTRG.50397.1"; exon_number "4"; scaffold_237 StringTie exon 1002793 1003355 1000 + . gene_id "MSTRG.50397"; transcript_id "MSTRG.50397.1"; exon_number "5"; scaffold_2372 StringTie exon 39464 39553 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "1"; scaffold_2372 StringTie exon 39648 39752 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "2"; scaffold_2372 StringTie exon 39863 40069 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "3"; scaffold_2372 StringTie exon 40267 40578 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "4"; scaffold_2372 StringTie exon 40779 40886 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "5"; scaffold_2372 StringTie exon 41047 41151 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "6"; scaffold_2372 StringTie exon 41271 41477 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "7"; scaffold_2372 StringTie exon 42951 43262 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "8"; scaffold_2372 StringTie exon 43382 43489 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "9"; scaffold_2372 StringTie exon 43604 43708 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "10"; scaffold_2372 StringTie exon 43920 44126 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "11"; scaffold_2372 StringTie exon 45012 45323 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "12"; scaffold_2372 StringTie exon 45444 45551 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "13"; scaffold_2372 StringTie exon 45939 46043 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "14"; scaffold_2372 StringTie exon 46235 46441 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "15"; scaffold_2372 StringTie exon 46844 47155 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "16"; scaffold_2372 StringTie exon 47275 47382 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "17"; scaffold_2372 StringTie exon 47626 47730 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "18"; scaffold_2372 StringTie exon 47998 48096 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "19"; scaffold_2372 StringTie exon 48315 48422 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "20"; scaffold_2372 StringTie exon 48637 48818 1000 - . gene_id "MSTRG.50431"; transcript_id "MSTRG.50431.8"; exon_number "21"; scaffold_2372 StringTie exon 73077 73197 1000 - . gene_id "MSTRG.50436"; transcript_id "MSTRG.50436.1"; exon_number "1"; scaffold_2372 StringTie exon 73984 74067 1000 - . gene_id "MSTRG.50436"; transcript_id "MSTRG.50436.1"; exon_number "2"; scaffold_2372 StringTie exon 74336 74483 1000 - . gene_id "MSTRG.50436"; transcript_id "MSTRG.50436.1"; exon_number "3"; scaffold_2372 StringTie exon 74817 74877 1000 - . gene_id "MSTRG.50436"; transcript_id "MSTRG.50436.1"; exon_number "4"; scaffold_2372 StringTie exon 82513 82598 1000 - . gene_id "MSTRG.50436"; transcript_id "MSTRG.50436.1"; exon_number "5"; scaffold_2373 StringTie exon 77061 77327 1000 . . gene_id "MSTRG.50450"; transcript_id "MSTRG.50450.1"; exon_number "1"; scaffold_23735 StringTie exon 3372 3649 1000 - . gene_id "MSTRG.50455"; transcript_id "MSTRG.50455.1"; exon_number "1"; scaffold_23746 StringTie exon 1262 1644 1000 . . gene_id "MSTRG.50464"; transcript_id "MSTRG.50464.1"; exon_number "1"; scaffold_2377 StringTie exon 65672 66429 1000 . . gene_id "MSTRG.50492"; transcript_id "MSTRG.50492.1"; exon_number "1"; scaffold_2379 StringTie exon 30852 31062 1000 . . gene_id "MSTRG.50529"; transcript_id "MSTRG.50529.1"; exon_number "1"; scaffold_23795 StringTie exon 2898 3067 1000 + . gene_id "MSTRG.50543"; transcript_id "MSTRG.50543.1"; exon_number "1"; scaffold_23795 StringTie exon 5328 5407 1000 + . gene_id "MSTRG.50543"; transcript_id "MSTRG.50543.1"; exon_number "2"; scaffold_23796 StringTie exon 5777 6007 1000 . . gene_id "MSTRG.50544"; transcript_id "MSTRG.50544.1"; exon_number "1"; scaffold_23798 StringTie exon 4071 4290 1000 . . gene_id "MSTRG.50545"; transcript_id "MSTRG.50545.1"; exon_number "1"; scaffold_238 StringTie exon 169429 169702 1000 . . gene_id "MSTRG.50564"; transcript_id "MSTRG.50564.1"; exon_number "1"; scaffold_238 StringTie exon 464582 464900 1000 . . gene_id "MSTRG.50576"; transcript_id "MSTRG.50576.1"; exon_number "1"; scaffold_238 StringTie exon 599946 600178 1000 . . gene_id "MSTRG.50589"; transcript_id "MSTRG.50589.1"; exon_number "1"; scaffold_238 StringTie exon 683464 683684 1000 . . gene_id "MSTRG.50603"; transcript_id "MSTRG.50603.1"; exon_number "1"; scaffold_238 StringTie exon 941301 941585 1000 . . gene_id "MSTRG.50618"; transcript_id "MSTRG.50618.1"; exon_number "1"; scaffold_238 StringTie exon 1121088 1122197 1000 . . gene_id "MSTRG.50638"; transcript_id "MSTRG.50638.1"; exon_number "1"; scaffold_238 StringTie exon 1127384 1127513 1000 - . gene_id "MSTRG.50642"; transcript_id "MSTRG.50642.1"; exon_number "1"; scaffold_238 StringTie exon 1127704 1127919 1000 - . gene_id "MSTRG.50642"; transcript_id "MSTRG.50642.1"; exon_number "2"; scaffold_2380 StringTie exon 16510 16640 1000 - . gene_id "MSTRG.50649"; transcript_id "MSTRG.50649.1"; exon_number "1"; scaffold_2380 StringTie exon 17145 17246 1000 - . gene_id "MSTRG.50649"; transcript_id "MSTRG.50649.1"; exon_number "2"; scaffold_2380 StringTie exon 17540 17761 1000 - . gene_id "MSTRG.50649"; transcript_id "MSTRG.50649.1"; exon_number "3"; scaffold_2380 StringTie exon 20947 21113 1000 - . gene_id "MSTRG.50649"; transcript_id "MSTRG.50649.1"; exon_number "4"; scaffold_2380 StringTie exon 23087 23272 1000 - . gene_id "MSTRG.50649"; transcript_id "MSTRG.50649.1"; exon_number "5"; scaffold_23807 StringTie exon 4088 4407 1000 . . gene_id "MSTRG.50662"; transcript_id "MSTRG.50662.1"; exon_number "1"; scaffold_2381 StringTie exon 39740 39838 1000 - . gene_id "MSTRG.50668"; transcript_id "MSTRG.50668.1"; exon_number "1"; scaffold_2381 StringTie exon 39989 40082 1000 - . gene_id "MSTRG.50668"; transcript_id "MSTRG.50668.1"; exon_number "2"; scaffold_2381 StringTie exon 40179 40266 1000 - . gene_id "MSTRG.50668"; transcript_id "MSTRG.50668.1"; exon_number "3"; scaffold_2381 StringTie exon 76346 77019 1000 - . gene_id "MSTRG.50674"; transcript_id "MSTRG.50674.1"; exon_number "1"; scaffold_2381 StringTie exon 77706 77728 1000 - . gene_id "MSTRG.50674"; transcript_id "MSTRG.50674.1"; exon_number "2"; scaffold_2382 StringTie exon 33693 33711 1000 - . gene_id "MSTRG.50691"; transcript_id "MSTRG.50691.1"; exon_number "1"; scaffold_2382 StringTie exon 34995 35231 1000 - . gene_id "MSTRG.50691"; transcript_id "MSTRG.50691.1"; exon_number "2"; scaffold_2382 StringTie exon 40144 40404 1000 - . gene_id "MSTRG.50691"; transcript_id "MSTRG.50691.1"; exon_number "3"; scaffold_2384 StringTie exon 77740 78003 1000 . . gene_id "MSTRG.50725"; transcript_id "MSTRG.50725.1"; exon_number "1"; scaffold_2384 StringTie exon 85348 85594 1000 - . gene_id "MSTRG.50726"; transcript_id "MSTRG.50726.1"; exon_number "1"; scaffold_2384 StringTie exon 85996 86076 1000 - . gene_id "MSTRG.50726"; transcript_id "MSTRG.50726.1"; exon_number "2"; scaffold_2384 StringTie exon 90088 90201 1000 - . gene_id "MSTRG.50726"; transcript_id "MSTRG.50726.1"; exon_number "3"; scaffold_23878 StringTie exon 1344 1733 1000 . . gene_id "MSTRG.50767"; transcript_id "MSTRG.50767.1"; exon_number "1"; scaffold_2388 StringTie exon 65982 66131 1000 + . gene_id "MSTRG.50777"; transcript_id "MSTRG.50777.1"; exon_number "1"; scaffold_2388 StringTie exon 72911 73009 1000 + . gene_id "MSTRG.50777"; transcript_id "MSTRG.50777.1"; exon_number "2"; scaffold_2388 StringTie exon 82115 82214 1000 + . gene_id "MSTRG.50777"; transcript_id "MSTRG.50777.1"; exon_number "3"; scaffold_2388 StringTie exon 87981 88088 1000 + . gene_id "MSTRG.50777"; transcript_id "MSTRG.50777.1"; exon_number "4"; scaffold_2388 StringTie exon 88912 89024 1000 + . gene_id "MSTRG.50777"; transcript_id "MSTRG.50777.1"; exon_number "5"; scaffold_2388 StringTie exon 89864 90086 1000 + . gene_id "MSTRG.50777"; transcript_id "MSTRG.50777.1"; exon_number "6"; scaffold_239 StringTie exon 52753 52974 1000 . . gene_id "MSTRG.50818"; transcript_id "MSTRG.50818.1"; exon_number "1"; scaffold_239 StringTie exon 281046 281299 1000 . . gene_id "MSTRG.50831"; transcript_id "MSTRG.50831.1"; exon_number "1"; scaffold_239 StringTie exon 544304 544562 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "1"; scaffold_239 StringTie exon 544701 544812 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "2"; scaffold_239 StringTie exon 545188 545412 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "3"; scaffold_239 StringTie exon 545519 545661 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "4"; scaffold_239 StringTie exon 545928 546082 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "5"; scaffold_239 StringTie exon 546282 546509 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "6"; scaffold_239 StringTie exon 546608 546852 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "7"; scaffold_239 StringTie exon 546949 547217 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "8"; scaffold_239 StringTie exon 547307 547471 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "9"; scaffold_239 StringTie exon 549167 549335 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "10"; scaffold_239 StringTie exon 549491 551166 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "11"; scaffold_239 StringTie exon 551322 551593 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "12"; scaffold_239 StringTie exon 551737 552003 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "13"; scaffold_239 StringTie exon 552119 552391 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "14"; scaffold_239 StringTie exon 552489 552752 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "15"; scaffold_239 StringTie exon 552837 553097 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "16"; scaffold_239 StringTie exon 557637 557897 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "17"; scaffold_239 StringTie exon 558015 558278 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "18"; scaffold_239 StringTie exon 558400 558660 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "19"; scaffold_239 StringTie exon 558767 559370 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "20"; scaffold_239 StringTie exon 559465 559606 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "21"; scaffold_239 StringTie exon 561429 561597 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "22"; scaffold_239 StringTie exon 561692 561878 1000 + . gene_id "MSTRG.50850"; transcript_id "MSTRG.50850.1"; exon_number "23"; scaffold_239 StringTie exon 624304 624611 1000 + . gene_id "MSTRG.50860"; transcript_id "MSTRG.50860.1"; exon_number "1"; scaffold_239 StringTie exon 624713 624991 1000 + . gene_id "MSTRG.50860"; transcript_id "MSTRG.50860.1"; exon_number "2"; scaffold_239 StringTie exon 625167 625466 1000 + . gene_id "MSTRG.50860"; transcript_id "MSTRG.50860.1"; exon_number "3"; scaffold_239 StringTie exon 625622 625924 1000 + . gene_id "MSTRG.50860"; transcript_id "MSTRG.50860.1"; exon_number "4"; scaffold_239 StringTie exon 626019 626209 1000 + . gene_id "MSTRG.50860"; transcript_id "MSTRG.50860.1"; exon_number "5"; scaffold_239 StringTie exon 1159942 1160184 1000 . . gene_id "MSTRG.50909"; transcript_id "MSTRG.50909.1"; exon_number "1"; scaffold_2391 StringTie exon 47343 47852 1000 . . gene_id "MSTRG.50928"; transcript_id "MSTRG.50928.1"; exon_number "1"; scaffold_23911 StringTie exon 1438 1761 1000 . . gene_id "MSTRG.50935"; transcript_id "MSTRG.50935.1"; exon_number "1"; scaffold_2393 StringTie exon 60851 61213 1000 . . gene_id "MSTRG.50967"; transcript_id "MSTRG.50967.1"; exon_number "1"; scaffold_23942 StringTie exon 470 876 1000 . . gene_id "MSTRG.50984"; transcript_id "MSTRG.50984.1"; exon_number "1"; scaffold_2395 StringTie exon 87646 87941 1000 . . gene_id "MSTRG.50998"; transcript_id "MSTRG.50998.1"; exon_number "1"; scaffold_23955 StringTie exon 5615 5868 1000 . . gene_id "MSTRG.51005"; transcript_id "MSTRG.51005.1"; exon_number "1"; scaffold_2396 StringTie exon 40771 41042 1000 . . gene_id "MSTRG.51015"; transcript_id "MSTRG.51015.1"; exon_number "1"; scaffold_23966 StringTie exon 850 2405 1000 - . gene_id "MSTRG.51026"; transcript_id "MSTRG.51026.1"; exon_number "1"; scaffold_23966 StringTie exon 3539 3634 1000 - . gene_id "MSTRG.51026"; transcript_id "MSTRG.51026.1"; exon_number "2"; scaffold_23966 StringTie exon 3739 3865 1000 - . gene_id "MSTRG.51026"; transcript_id "MSTRG.51026.1"; exon_number "3"; scaffold_23966 StringTie exon 4097 4231 1000 - . gene_id "MSTRG.51026"; transcript_id "MSTRG.51026.1"; exon_number "4"; scaffold_23969 StringTie exon 38 424 1000 . . gene_id "MSTRG.51028"; transcript_id "MSTRG.51028.1"; exon_number "1"; scaffold_2397 StringTie exon 5726 5962 1000 . . gene_id "MSTRG.51030"; transcript_id "MSTRG.51030.1"; exon_number "1"; scaffold_23973 StringTie exon 613 867 1000 . . gene_id "MSTRG.51046"; transcript_id "MSTRG.51046.1"; exon_number "1"; scaffold_2398 StringTie exon 29717 30338 1000 . . gene_id "MSTRG.51052"; transcript_id "MSTRG.51052.1"; exon_number "1"; scaffold_2399 StringTie exon 85856 86716 1000 . . gene_id "MSTRG.51066"; transcript_id "MSTRG.51066.1"; exon_number "1"; scaffold_23996 StringTie exon 1534 1563 1000 + . gene_id "MSTRG.51071"; transcript_id "MSTRG.51071.1"; exon_number "1"; scaffold_23996 StringTie exon 1877 2023 1000 + . gene_id "MSTRG.51071"; transcript_id "MSTRG.51071.1"; exon_number "2"; scaffold_23996 StringTie exon 2105 2226 1000 + . gene_id "MSTRG.51071"; transcript_id "MSTRG.51071.1"; exon_number "3"; scaffold_23998 StringTie exon 5045 5182 1000 - . gene_id "MSTRG.51075"; transcript_id "MSTRG.51075.1"; exon_number "1"; scaffold_23998 StringTie exon 5417 5517 1000 - . gene_id "MSTRG.51075"; transcript_id "MSTRG.51075.1"; exon_number "2"; scaffold_23998 StringTie exon 5630 5716 1000 - . gene_id "MSTRG.51075"; transcript_id "MSTRG.51075.1"; exon_number "3"; scaffold_24 StringTie exon 153706 153805 1000 - . gene_id "MSTRG.51084"; transcript_id "MSTRG.51084.1"; exon_number "1"; scaffold_24 StringTie exon 154210 154343 1000 - . gene_id "MSTRG.51084"; transcript_id "MSTRG.51084.1"; exon_number "2"; scaffold_24 StringTie exon 154699 154791 1000 - . gene_id "MSTRG.51084"; transcript_id "MSTRG.51084.1"; exon_number "3"; scaffold_24 StringTie exon 328655 328927 1000 . . gene_id "MSTRG.51099"; transcript_id "MSTRG.51099.1"; exon_number "1"; scaffold_24 StringTie exon 521082 521652 1000 . . gene_id "MSTRG.51106"; transcript_id "MSTRG.51106.1"; exon_number "1"; scaffold_24 StringTie exon 984224 984311 1000 - . gene_id "MSTRG.51149"; transcript_id "MSTRG.51149.1"; exon_number "1"; scaffold_24 StringTie exon 984526 984582 1000 - . gene_id "MSTRG.51149"; transcript_id "MSTRG.51149.1"; exon_number "2"; scaffold_24 StringTie exon 985200 985250 1000 - . gene_id "MSTRG.51149"; transcript_id "MSTRG.51149.1"; exon_number "3"; scaffold_24 StringTie exon 985653 985668 1000 - . gene_id "MSTRG.51149"; transcript_id "MSTRG.51149.1"; exon_number "4"; scaffold_24 StringTie exon 1182465 1182546 1000 - . gene_id "MSTRG.51168"; transcript_id "MSTRG.51168.1"; exon_number "1"; scaffold_24 StringTie exon 1183406 1183570 1000 - . gene_id "MSTRG.51168"; transcript_id "MSTRG.51168.1"; exon_number "2"; scaffold_24 StringTie exon 1187717 1187780 1000 - . gene_id "MSTRG.51168"; transcript_id "MSTRG.51168.1"; exon_number "3"; scaffold_24 StringTie exon 1311784 1312093 1000 . . gene_id "MSTRG.51177"; transcript_id "MSTRG.51177.1"; exon_number "1"; scaffold_24 StringTie exon 1689829 1690051 1000 + . gene_id "MSTRG.51195"; transcript_id "MSTRG.51195.1"; exon_number "1"; scaffold_24 StringTie exon 1690165 1690221 1000 + . gene_id "MSTRG.51195"; transcript_id "MSTRG.51195.1"; exon_number "2"; scaffold_24 StringTie exon 1690634 1690656 1000 + . gene_id "MSTRG.51195"; transcript_id "MSTRG.51195.1"; exon_number "3"; scaffold_24 StringTie exon 1824068 1825477 1000 . . gene_id "MSTRG.51208"; transcript_id "MSTRG.51208.1"; exon_number "1"; scaffold_24 StringTie exon 2153668 2154043 1000 . . gene_id "MSTRG.51234"; transcript_id "MSTRG.51234.1"; exon_number "1"; scaffold_24 StringTie exon 2206970 2207050 1000 + . gene_id "MSTRG.51241"; transcript_id "MSTRG.51241.1"; exon_number "1"; scaffold_24 StringTie exon 2207461 2207613 1000 + . gene_id "MSTRG.51241"; transcript_id "MSTRG.51241.1"; exon_number "2"; scaffold_24 StringTie exon 2212953 2213170 1000 + . gene_id "MSTRG.51241"; transcript_id "MSTRG.51241.1"; exon_number "3"; scaffold_24 StringTie exon 2213384 2213423 1000 + . gene_id "MSTRG.51241"; transcript_id "MSTRG.51241.1"; exon_number "4"; scaffold_24 StringTie exon 2215308 2215600 1000 . . gene_id "MSTRG.51244"; transcript_id "MSTRG.51244.1"; exon_number "1"; scaffold_24 StringTie exon 2217020 2217369 1000 . . gene_id "MSTRG.51245"; transcript_id "MSTRG.51245.1"; exon_number "1"; scaffold_24 StringTie exon 2560646 2562340 1000 . . gene_id "MSTRG.51258"; transcript_id "MSTRG.51258.1"; exon_number "1"; scaffold_240 StringTie exon 297777 298002 1000 . . gene_id "MSTRG.51282"; transcript_id "MSTRG.51282.1"; exon_number "1"; scaffold_240 StringTie exon 360877 361112 1000 . . gene_id "MSTRG.51288"; transcript_id "MSTRG.51288.1"; exon_number "1"; scaffold_240 StringTie exon 607446 607766 1000 . . gene_id "MSTRG.51299"; transcript_id "MSTRG.51299.1"; exon_number "1"; scaffold_240 StringTie exon 616435 616794 1000 . . gene_id "MSTRG.51300"; transcript_id "MSTRG.51300.1"; exon_number "1"; scaffold_240 StringTie exon 625491 625764 1000 . . gene_id "MSTRG.51301"; transcript_id "MSTRG.51301.1"; exon_number "1"; scaffold_240 StringTie exon 668047 668412 1000 . . gene_id "MSTRG.51310"; transcript_id "MSTRG.51310.1"; exon_number "1"; scaffold_240 StringTie exon 751830 751940 1000 + . gene_id "MSTRG.51320"; transcript_id "MSTRG.51320.1"; exon_number "1"; scaffold_240 StringTie exon 774933 775014 1000 + . gene_id "MSTRG.51320"; transcript_id "MSTRG.51320.1"; exon_number "2"; scaffold_240 StringTie exon 775813 775898 1000 + . gene_id "MSTRG.51320"; transcript_id "MSTRG.51320.1"; exon_number "3"; scaffold_240 StringTie exon 776588 776662 1000 + . gene_id "MSTRG.51320"; transcript_id "MSTRG.51320.1"; exon_number "4"; scaffold_240 StringTie exon 785902 786098 1000 + . gene_id "MSTRG.51320"; transcript_id "MSTRG.51320.1"; exon_number "5"; scaffold_240 StringTie exon 787070 787125 1000 + . gene_id "MSTRG.51320"; transcript_id "MSTRG.51320.1"; exon_number "6"; scaffold_240 StringTie exon 881158 881313 1000 + . gene_id "MSTRG.51329"; transcript_id "MSTRG.51329.1"; exon_number "1"; scaffold_240 StringTie exon 881635 881707 1000 + . gene_id "MSTRG.51329"; transcript_id "MSTRG.51329.1"; exon_number "2"; scaffold_240 StringTie exon 882008 882155 1000 + . gene_id "MSTRG.51329"; transcript_id "MSTRG.51329.1"; exon_number "3"; scaffold_240 StringTie exon 882389 882574 1000 + . gene_id "MSTRG.51329"; transcript_id "MSTRG.51329.1"; exon_number "4"; scaffold_240 StringTie exon 882727 882837 1000 + . gene_id "MSTRG.51329"; transcript_id "MSTRG.51329.1"; exon_number "5"; scaffold_240 StringTie exon 981053 981322 1000 + . gene_id "MSTRG.51344"; transcript_id "MSTRG.51344.1"; exon_number "1"; scaffold_240 StringTie exon 1013705 1014149 1000 + . gene_id "MSTRG.51344"; transcript_id "MSTRG.51344.1"; exon_number "2"; scaffold_240 StringTie exon 1013912 1017330 1000 - . gene_id "MSTRG.51345"; transcript_id "MSTRG.51345.1"; exon_number "1"; scaffold_240 StringTie exon 1076553 1077008 1000 . . gene_id "MSTRG.51350"; transcript_id "MSTRG.51350.1"; exon_number "1"; scaffold_2400 StringTie exon 60449 60996 1000 . . gene_id "MSTRG.51368"; transcript_id "MSTRG.51368.1"; exon_number "1"; scaffold_24001 StringTie exon 4106 4463 1000 . . gene_id "MSTRG.51372"; transcript_id "MSTRG.51372.1"; exon_number "1"; scaffold_24027 StringTie exon 444 667 1000 . . gene_id "MSTRG.51401"; transcript_id "MSTRG.51401.1"; exon_number "1"; scaffold_2403 StringTie exon 43520 43611 1000 + . gene_id "MSTRG.51408"; transcript_id "MSTRG.51408.1"; exon_number "1"; scaffold_2403 StringTie exon 43818 43918 1000 + . gene_id "MSTRG.51408"; transcript_id "MSTRG.51408.1"; exon_number "2"; scaffold_2403 StringTie exon 51197 51308 1000 + . gene_id "MSTRG.51408"; transcript_id "MSTRG.51408.1"; exon_number "3"; scaffold_2403 StringTie exon 51388 51534 1000 + . gene_id "MSTRG.51408"; transcript_id "MSTRG.51408.1"; exon_number "4"; scaffold_24034 StringTie exon 4613 4818 1000 . . gene_id "MSTRG.51422"; transcript_id "MSTRG.51422.1"; exon_number "1"; scaffold_24041 StringTie exon 455 702 1000 . . gene_id "MSTRG.51434"; transcript_id "MSTRG.51434.1"; exon_number "1"; scaffold_2406 StringTie exon 32477 32669 1000 - . gene_id "MSTRG.51448"; transcript_id "MSTRG.51448.1"; exon_number "1"; scaffold_2406 StringTie exon 38015 38207 1000 - . gene_id "MSTRG.51448"; transcript_id "MSTRG.51448.1"; exon_number "2"; scaffold_2406 StringTie exon 39264 39495 1000 - . gene_id "MSTRG.51448"; transcript_id "MSTRG.51448.1"; exon_number "3"; scaffold_2406 StringTie exon 48804 48828 1000 - . gene_id "MSTRG.51448"; transcript_id "MSTRG.51448.1"; exon_number "4"; scaffold_2408 StringTie exon 49142 49416 1000 - . gene_id "MSTRG.51483"; transcript_id "MSTRG.51483.1"; exon_number "1"; scaffold_2408 StringTie exon 51032 51107 1000 - . gene_id "MSTRG.51483"; transcript_id "MSTRG.51483.1"; exon_number "2"; scaffold_24081 StringTie exon 2456 2674 1000 . . gene_id "MSTRG.51489"; transcript_id "MSTRG.51489.1"; exon_number "1"; scaffold_2409 StringTie exon 73060 73508 1000 . . gene_id "MSTRG.51498"; transcript_id "MSTRG.51498.1"; exon_number "1"; scaffold_241 StringTie exon 191222 191433 1000 . . gene_id "MSTRG.51513"; transcript_id "MSTRG.51513.1"; exon_number "1"; scaffold_241 StringTie exon 413661 413926 1000 . . gene_id "MSTRG.51522"; transcript_id "MSTRG.51522.1"; exon_number "1"; scaffold_241 StringTie exon 821915 822128 1000 . . gene_id "MSTRG.51538"; transcript_id "MSTRG.51538.1"; exon_number "1"; scaffold_2412 StringTie exon 7478 7802 1000 . . gene_id "MSTRG.51590"; transcript_id "MSTRG.51590.1"; exon_number "1"; scaffold_2413 StringTie exon 37360 38096 1000 . . gene_id "MSTRG.51615"; transcript_id "MSTRG.51615.1"; exon_number "1"; scaffold_2413 StringTie exon 99323 99835 1000 . . gene_id "MSTRG.51624"; transcript_id "MSTRG.51624.1"; exon_number "1"; scaffold_2416 StringTie exon 27065 27168 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "1"; scaffold_2416 StringTie exon 27480 27545 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "2"; scaffold_2416 StringTie exon 28547 28678 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "3"; scaffold_2416 StringTie exon 32722 32850 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "4"; scaffold_2416 StringTie exon 32941 33084 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "5"; scaffold_2416 StringTie exon 33999 34124 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "6"; scaffold_2416 StringTie exon 34358 34441 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "7"; scaffold_2416 StringTie exon 34955 35167 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "8"; scaffold_2416 StringTie exon 35507 35597 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "9"; scaffold_2416 StringTie exon 38293 38667 1000 + . gene_id "MSTRG.51662"; transcript_id "MSTRG.51662.2"; exon_number "10"; scaffold_2416 StringTie exon 85235 85512 1000 . . gene_id "MSTRG.51665"; transcript_id "MSTRG.51665.1"; exon_number "1"; scaffold_2416 StringTie exon 94956 95230 1000 . . gene_id "MSTRG.51666"; transcript_id "MSTRG.51666.1"; exon_number "1"; scaffold_2418 StringTie exon 47222 47425 1000 . . gene_id "MSTRG.51693"; transcript_id "MSTRG.51693.1"; exon_number "1"; scaffold_2419 StringTie exon 95699 95761 1000 + . gene_id "MSTRG.51711"; transcript_id "MSTRG.51711.1"; exon_number "1"; scaffold_2419 StringTie exon 96358 96527 1000 + . gene_id "MSTRG.51711"; transcript_id "MSTRG.51711.1"; exon_number "2"; scaffold_242 StringTie exon 26867 27072 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "1"; scaffold_242 StringTie exon 27300 27436 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "2"; scaffold_242 StringTie exon 27722 28022 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "3"; scaffold_242 StringTie exon 28335 28542 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "4"; scaffold_242 StringTie exon 28725 28836 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "5"; scaffold_242 StringTie exon 29039 29176 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "6"; scaffold_242 StringTie exon 29489 29630 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "7"; scaffold_242 StringTie exon 30078 30175 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "8"; scaffold_242 StringTie exon 30411 30552 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "9"; scaffold_242 StringTie exon 30807 31023 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "10"; scaffold_242 StringTie exon 31162 31339 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "11"; scaffold_242 StringTie exon 31547 31645 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "12"; scaffold_242 StringTie exon 31844 32029 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "13"; scaffold_242 StringTie exon 32316 32465 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "14"; scaffold_242 StringTie exon 32641 32788 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "15"; scaffold_242 StringTie exon 33009 33106 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "16"; scaffold_242 StringTie exon 33335 33484 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "17"; scaffold_242 StringTie exon 34060 34168 1000 - . gene_id "MSTRG.51724"; transcript_id "MSTRG.51724.1"; exon_number "18"; scaffold_242 StringTie exon 1034618 1034703 1000 + . gene_id "MSTRG.51793"; transcript_id "MSTRG.51793.1"; exon_number "1"; scaffold_242 StringTie exon 1034913 1035201 1000 + . gene_id "MSTRG.51793"; transcript_id "MSTRG.51793.1"; exon_number "2"; scaffold_242 StringTie exon 1035356 1035518 1000 + . gene_id "MSTRG.51793"; transcript_id "MSTRG.51793.1"; exon_number "3"; scaffold_242 StringTie exon 1035650 1035796 1000 + . gene_id "MSTRG.51793"; transcript_id "MSTRG.51793.1"; exon_number "4"; scaffold_242 StringTie exon 1040124 1040171 1000 + . gene_id "MSTRG.51793"; transcript_id "MSTRG.51793.1"; exon_number "5"; scaffold_242 StringTie exon 1141998 1142133 1000 + . gene_id "MSTRG.51808"; transcript_id "MSTRG.51808.1"; exon_number "1"; scaffold_242 StringTie exon 1142248 1142438 1000 + . gene_id "MSTRG.51808"; transcript_id "MSTRG.51808.1"; exon_number "2"; scaffold_24209 StringTie exon 1348 1788 1000 . . gene_id "MSTRG.51820"; transcript_id "MSTRG.51820.1"; exon_number "1"; scaffold_24213 StringTie exon 1646 1756 1000 - . gene_id "MSTRG.51828"; transcript_id "MSTRG.51828.1"; exon_number "1"; scaffold_24213 StringTie exon 3015 3139 1000 - . gene_id "MSTRG.51828"; transcript_id "MSTRG.51828.1"; exon_number "2"; scaffold_2422 StringTie exon 58429 58629 1000 . . gene_id "MSTRG.51835"; transcript_id "MSTRG.51835.1"; exon_number "1"; scaffold_2424 StringTie exon 62598 62778 1000 + . gene_id "MSTRG.51862"; transcript_id "MSTRG.51862.1"; exon_number "1"; scaffold_2424 StringTie exon 63136 63262 1000 + . gene_id "MSTRG.51862"; transcript_id "MSTRG.51862.1"; exon_number "2"; scaffold_2424 StringTie exon 63510 63634 1000 + . gene_id "MSTRG.51862"; transcript_id "MSTRG.51862.1"; exon_number "3"; scaffold_2424 StringTie exon 63828 63950 1000 + . gene_id "MSTRG.51862"; transcript_id "MSTRG.51862.1"; exon_number "4"; scaffold_2424 StringTie exon 64153 64272 1000 + . gene_id "MSTRG.51862"; transcript_id "MSTRG.51862.1"; exon_number "5"; scaffold_2424 StringTie exon 64502 64564 1000 + . gene_id "MSTRG.51862"; transcript_id "MSTRG.51862.1"; exon_number "6"; scaffold_2424 StringTie exon 64655 64976 1000 + . gene_id "MSTRG.51862"; transcript_id "MSTRG.51862.1"; exon_number "7"; scaffold_2425 StringTie exon 31779 31981 1000 . . gene_id "MSTRG.51875"; transcript_id "MSTRG.51875.1"; exon_number "1"; scaffold_24259 StringTie exon 4773 4996 1000 . . gene_id "MSTRG.51888"; transcript_id "MSTRG.51888.1"; exon_number "1"; scaffold_24264 StringTie exon 3557 3919 1000 . . gene_id "MSTRG.51908"; transcript_id "MSTRG.51908.1"; exon_number "1"; scaffold_2429 StringTie exon 74520 74759 1000 . . gene_id "MSTRG.51951"; transcript_id "MSTRG.51951.1"; exon_number "1"; scaffold_24292 StringTie exon 3742 3911 1000 + . gene_id "MSTRG.51955"; transcript_id "MSTRG.51955.1"; exon_number "1"; scaffold_24292 StringTie exon 3943 4016 1000 + . gene_id "MSTRG.51955"; transcript_id "MSTRG.51955.1"; exon_number "2"; scaffold_243 StringTie exon 197650 198043 1000 . . gene_id "MSTRG.51966"; transcript_id "MSTRG.51966.1"; exon_number "1"; scaffold_243 StringTie exon 382640 382937 1000 . . gene_id "MSTRG.51976"; transcript_id "MSTRG.51976.1"; exon_number "1"; scaffold_243 StringTie exon 532300 532891 1000 . . gene_id "MSTRG.51988"; transcript_id "MSTRG.51988.1"; exon_number "1"; scaffold_243 StringTie exon 655364 655654 1000 - . gene_id "MSTRG.51998"; transcript_id "MSTRG.51998.1"; exon_number "1"; scaffold_243 StringTie exon 655813 655824 1000 - . gene_id "MSTRG.51998"; transcript_id "MSTRG.51998.1"; exon_number "2"; scaffold_243 StringTie exon 655885 655929 1000 - . gene_id "MSTRG.51999"; transcript_id "MSTRG.51999.1"; exon_number "1"; scaffold_243 StringTie exon 656076 656190 1000 - . gene_id "MSTRG.51999"; transcript_id "MSTRG.51999.1"; exon_number "2"; scaffold_243 StringTie exon 656372 656495 1000 - . gene_id "MSTRG.51999"; transcript_id "MSTRG.51999.1"; exon_number "3"; scaffold_243 StringTie exon 702325 702385 1000 - . gene_id "MSTRG.52002"; transcript_id "MSTRG.52002.1"; exon_number "1"; scaffold_243 StringTie exon 702870 702929 1000 - . gene_id "MSTRG.52002"; transcript_id "MSTRG.52002.1"; exon_number "2"; scaffold_243 StringTie exon 703194 703319 1000 - . gene_id "MSTRG.52002"; transcript_id "MSTRG.52002.1"; exon_number "3"; scaffold_243 StringTie exon 703563 703625 1000 - . gene_id "MSTRG.52002"; transcript_id "MSTRG.52002.1"; exon_number "4"; scaffold_243 StringTie exon 708571 708633 1000 - . gene_id "MSTRG.52002"; transcript_id "MSTRG.52002.1"; exon_number "5"; scaffold_243 StringTie exon 746950 747036 1000 - . gene_id "MSTRG.52007"; transcript_id "MSTRG.52007.2"; exon_number "1"; scaffold_243 StringTie exon 749208 749258 1000 - . gene_id "MSTRG.52007"; transcript_id "MSTRG.52007.2"; exon_number "2"; scaffold_243 StringTie exon 749356 749385 1000 - . gene_id "MSTRG.52007"; transcript_id "MSTRG.52007.2"; exon_number "3"; scaffold_243 StringTie exon 750146 750190 1000 - . gene_id "MSTRG.52007"; transcript_id "MSTRG.52007.2"; exon_number "4"; scaffold_243 StringTie exon 750334 750429 1000 - . gene_id "MSTRG.52007"; transcript_id "MSTRG.52007.2"; exon_number "5"; scaffold_243 StringTie exon 752771 752867 1000 - . gene_id "MSTRG.52007"; transcript_id "MSTRG.52007.2"; exon_number "6"; scaffold_243 StringTie exon 777265 777487 1000 . . gene_id "MSTRG.52011"; transcript_id "MSTRG.52011.1"; exon_number "1"; scaffold_243 StringTie exon 850775 851015 1000 . . gene_id "MSTRG.52018"; transcript_id "MSTRG.52018.1"; exon_number "1"; scaffold_243 StringTie exon 896626 896841 1000 . . gene_id "MSTRG.52023"; transcript_id "MSTRG.52023.1"; exon_number "1"; scaffold_243 StringTie exon 944894 945101 1000 . . gene_id "MSTRG.52026"; transcript_id "MSTRG.52026.1"; exon_number "1"; scaffold_243 StringTie exon 1041937 1042018 1000 + . gene_id "MSTRG.52032"; transcript_id "MSTRG.52032.1"; exon_number "1"; scaffold_243 StringTie exon 1042123 1042275 1000 + . gene_id "MSTRG.52032"; transcript_id "MSTRG.52032.1"; exon_number "2"; scaffold_243 StringTie exon 1042480 1042634 1000 + . gene_id "MSTRG.52032"; transcript_id "MSTRG.52032.1"; exon_number "3"; scaffold_243 StringTie exon 1045767 1046011 1000 + . gene_id "MSTRG.52032"; transcript_id "MSTRG.52032.1"; exon_number "4"; scaffold_243 StringTie exon 1046245 1046523 1000 + . gene_id "MSTRG.52032"; transcript_id "MSTRG.52032.1"; exon_number "5"; scaffold_24302 StringTie exon 544 888 1000 . . gene_id "MSTRG.52051"; transcript_id "MSTRG.52051.1"; exon_number "1"; scaffold_2431 StringTie exon 7767 8620 1000 . . gene_id "MSTRG.52060"; transcript_id "MSTRG.52060.1"; exon_number "1"; scaffold_2431 StringTie exon 74164 74902 1000 . . gene_id "MSTRG.52066"; transcript_id "MSTRG.52066.1"; exon_number "1"; scaffold_24314 StringTie exon 5122 5723 1000 . . gene_id "MSTRG.52073"; transcript_id "MSTRG.52073.1"; exon_number "1"; scaffold_2432 StringTie exon 93645 93846 1000 . . gene_id "MSTRG.52080"; transcript_id "MSTRG.52080.1"; exon_number "1"; scaffold_2433 StringTie exon 23517 23653 1000 - . gene_id "MSTRG.52095"; transcript_id "MSTRG.52095.1"; exon_number "1"; scaffold_2433 StringTie exon 23920 24031 1000 - . gene_id "MSTRG.52095"; transcript_id "MSTRG.52095.1"; exon_number "2"; scaffold_2433 StringTie exon 30128 30585 1000 - . gene_id "MSTRG.52099"; transcript_id "MSTRG.52099.3"; exon_number "1"; scaffold_2433 StringTie exon 30822 31470 1000 - . gene_id "MSTRG.52099"; transcript_id "MSTRG.52099.3"; exon_number "2"; scaffold_2435 StringTie exon 97288 97639 1000 . . gene_id "MSTRG.52132"; transcript_id "MSTRG.52132.1"; exon_number "1"; scaffold_2437 StringTie exon 60003 60375 1000 . . gene_id "MSTRG.52151"; transcript_id "MSTRG.52151.1"; exon_number "1"; scaffold_24370 StringTie exon 1476 1718 1000 . . gene_id "MSTRG.52154"; transcript_id "MSTRG.52154.1"; exon_number "1"; scaffold_2438 StringTie exon 88985 89414 1000 . . gene_id "MSTRG.52170"; transcript_id "MSTRG.52170.1"; exon_number "1"; scaffold_244 StringTie exon 101766 102002 1000 . . gene_id "MSTRG.52185"; transcript_id "MSTRG.52185.1"; exon_number "1"; scaffold_244 StringTie exon 491911 492534 1000 + . gene_id "MSTRG.52212"; transcript_id "MSTRG.52212.1"; exon_number "1"; scaffold_244 StringTie exon 493776 493816 1000 + . gene_id "MSTRG.52212"; transcript_id "MSTRG.52212.1"; exon_number "2"; scaffold_244 StringTie exon 581641 581856 1000 . . gene_id "MSTRG.52220"; transcript_id "MSTRG.52220.1"; exon_number "1"; scaffold_244 StringTie exon 594890 595622 1000 . . gene_id "MSTRG.52223"; transcript_id "MSTRG.52223.1"; exon_number "1"; scaffold_244 StringTie exon 635216 635558 1000 . . gene_id "MSTRG.52230"; transcript_id "MSTRG.52230.1"; exon_number "1"; scaffold_244 StringTie exon 832832 833309 1000 + . gene_id "MSTRG.52242"; transcript_id "MSTRG.52242.1"; exon_number "1"; scaffold_244 StringTie exon 834246 834328 1000 + . gene_id "MSTRG.52242"; transcript_id "MSTRG.52242.1"; exon_number "2"; scaffold_244 StringTie exon 834477 834633 1000 + . gene_id "MSTRG.52242"; transcript_id "MSTRG.52242.1"; exon_number "3"; scaffold_244 StringTie exon 834764 834925 1000 + . gene_id "MSTRG.52242"; transcript_id "MSTRG.52242.1"; exon_number "4"; scaffold_244 StringTie exon 835246 835466 1000 + . gene_id "MSTRG.52242"; transcript_id "MSTRG.52242.1"; exon_number "5"; scaffold_244 StringTie exon 835581 835803 1000 + . gene_id "MSTRG.52242"; transcript_id "MSTRG.52242.1"; exon_number "6"; scaffold_244 StringTie exon 1145196 1145429 1000 . . gene_id "MSTRG.52279"; transcript_id "MSTRG.52279.1"; exon_number "1"; scaffold_2441 StringTie exon 42708 42988 1000 . . gene_id "MSTRG.52290"; transcript_id "MSTRG.52290.1"; exon_number "1"; scaffold_2443 StringTie exon 20492 20743 1000 . . gene_id "MSTRG.52316"; transcript_id "MSTRG.52316.1"; exon_number "1"; scaffold_2444 StringTie exon 31724 32178 1000 . . gene_id "MSTRG.52325"; transcript_id "MSTRG.52325.1"; exon_number "1"; scaffold_24443 StringTie exon 3199 3837 1000 . . gene_id "MSTRG.52334"; transcript_id "MSTRG.52334.1"; exon_number "1"; scaffold_24454 StringTie exon 1737 2938 1000 . . gene_id "MSTRG.52345"; transcript_id "MSTRG.52345.1"; exon_number "1"; scaffold_24459 StringTie exon 4678 5043 1000 . . gene_id "MSTRG.52347"; transcript_id "MSTRG.52347.1"; exon_number "1"; scaffold_24490 StringTie exon 4668 4969 1000 . . gene_id "MSTRG.52382"; transcript_id "MSTRG.52382.1"; exon_number "1"; scaffold_24497 StringTie exon 5122 5393 1000 . . gene_id "MSTRG.52386"; transcript_id "MSTRG.52386.1"; exon_number "1"; scaffold_24499 StringTie exon 31 260 1000 . . gene_id "MSTRG.52387"; transcript_id "MSTRG.52387.1"; exon_number "1"; scaffold_245 StringTie exon 1344 1657 1000 . . gene_id "MSTRG.52389"; transcript_id "MSTRG.52389.1"; exon_number "1"; scaffold_245 StringTie exon 146671 147125 1000 . . gene_id "MSTRG.52411"; transcript_id "MSTRG.52411.1"; exon_number "1"; scaffold_245 StringTie exon 170180 170550 1000 . . gene_id "MSTRG.52416"; transcript_id "MSTRG.52416.1"; exon_number "1"; scaffold_245 StringTie exon 457384 457610 1000 . . gene_id "MSTRG.52447"; transcript_id "MSTRG.52447.1"; exon_number "1"; scaffold_245 StringTie exon 483772 483971 1000 . . gene_id "MSTRG.52449"; transcript_id "MSTRG.52449.1"; exon_number "1"; scaffold_245 StringTie exon 748160 748470 1000 . . gene_id "MSTRG.52484"; transcript_id "MSTRG.52484.1"; exon_number "1"; scaffold_245 StringTie exon 757585 757880 1000 . . gene_id "MSTRG.52485"; transcript_id "MSTRG.52485.1"; exon_number "1"; scaffold_245 StringTie exon 894542 894938 1000 . . gene_id "MSTRG.52495"; transcript_id "MSTRG.52495.1"; exon_number "1"; scaffold_245 StringTie exon 1044635 1045293 1000 . . gene_id "MSTRG.52507"; transcript_id "MSTRG.52507.1"; exon_number "1"; scaffold_2450 StringTie exon 8389 10037 1000 . . gene_id "MSTRG.52513"; transcript_id "MSTRG.52513.1"; exon_number "1"; scaffold_2450 StringTie exon 42320 42430 1000 + . gene_id "MSTRG.52520"; transcript_id "MSTRG.52520.1"; exon_number "1"; scaffold_2450 StringTie exon 42688 42726 1000 + . gene_id "MSTRG.52520"; transcript_id "MSTRG.52520.1"; exon_number "2"; scaffold_2450 StringTie exon 45394 45792 1000 + . gene_id "MSTRG.52520"; transcript_id "MSTRG.52520.1"; exon_number "3"; scaffold_2450 StringTie exon 46443 46751 1000 + . gene_id "MSTRG.52520"; transcript_id "MSTRG.52520.1"; exon_number "4"; scaffold_2450 StringTie exon 56474 56736 1000 . . gene_id "MSTRG.52523"; transcript_id "MSTRG.52523.1"; exon_number "1"; scaffold_2450 StringTie exon 69158 69945 1000 - . gene_id "MSTRG.52525"; transcript_id "MSTRG.52525.1"; exon_number "1"; scaffold_2450 StringTie exon 91606 91881 1000 . . gene_id "MSTRG.52528"; transcript_id "MSTRG.52528.1"; exon_number "1"; scaffold_2451 StringTie exon 50460 50871 1000 . . gene_id "MSTRG.52543"; transcript_id "MSTRG.52543.1"; exon_number "1"; scaffold_2451 StringTie exon 56874 57194 1000 . . gene_id "MSTRG.52545"; transcript_id "MSTRG.52545.1"; exon_number "1"; scaffold_2451 StringTie exon 90999 91571 1000 - . gene_id "MSTRG.52549"; transcript_id "MSTRG.52549.1"; exon_number "1"; scaffold_2451 StringTie exon 91804 91846 1000 - . gene_id "MSTRG.52549"; transcript_id "MSTRG.52549.1"; exon_number "2"; scaffold_2454 StringTie exon 33670 33805 1000 + . gene_id "MSTRG.52572"; transcript_id "MSTRG.52572.1"; exon_number "1"; scaffold_2454 StringTie exon 34703 35011 1000 + . gene_id "MSTRG.52572"; transcript_id "MSTRG.52572.1"; exon_number "2"; scaffold_2454 StringTie exon 44949 45598 1000 . . gene_id "MSTRG.52575"; transcript_id "MSTRG.52575.1"; exon_number "1"; scaffold_2454 StringTie exon 53153 53373 1000 . . gene_id "MSTRG.52578"; transcript_id "MSTRG.52578.1"; exon_number "1"; scaffold_24548 StringTie exon 2274 2513 1000 . . gene_id "MSTRG.52587"; transcript_id "MSTRG.52587.1"; exon_number "1"; scaffold_24549 StringTie exon 4804 5382 1000 . . gene_id "MSTRG.52588"; transcript_id "MSTRG.52588.1"; exon_number "1"; scaffold_2455 StringTie exon 84746 85101 1000 . . gene_id "MSTRG.52593"; transcript_id "MSTRG.52593.1"; exon_number "1"; scaffold_24564 StringTie exon 665 929 1000 . . gene_id "MSTRG.52613"; transcript_id "MSTRG.52613.1"; exon_number "1"; scaffold_2458 StringTie exon 70347 70620 1000 . . gene_id "MSTRG.52639"; transcript_id "MSTRG.52639.1"; exon_number "1"; scaffold_246 StringTie exon 67329 67596 1000 . . gene_id "MSTRG.52658"; transcript_id "MSTRG.52658.1"; exon_number "1"; scaffold_246 StringTie exon 808326 808796 1000 . . gene_id "MSTRG.52695"; transcript_id "MSTRG.52695.1"; exon_number "1"; scaffold_246 StringTie exon 1060282 1060519 1000 . . gene_id "MSTRG.52722"; transcript_id "MSTRG.52722.1"; exon_number "1"; scaffold_2461 StringTie exon 89764 90080 1000 . . gene_id "MSTRG.52745"; transcript_id "MSTRG.52745.1"; exon_number "1"; scaffold_2462 StringTie exon 21658 21913 1000 . . gene_id "MSTRG.52751"; transcript_id "MSTRG.52751.1"; exon_number "1"; scaffold_24628 StringTie exon 5229 5522 1000 . . gene_id "MSTRG.52760"; transcript_id "MSTRG.52760.1"; exon_number "1"; scaffold_24634 StringTie exon 32 407 1000 . . gene_id "MSTRG.52766"; transcript_id "MSTRG.52766.1"; exon_number "1"; scaffold_24635 StringTie exon 5258 5460 1000 . . gene_id "MSTRG.52767"; transcript_id "MSTRG.52767.1"; exon_number "1"; scaffold_24638 StringTie exon 3930 4143 1000 . . gene_id "MSTRG.52768"; transcript_id "MSTRG.52768.1"; exon_number "1"; scaffold_2464 StringTie exon 7604 7641 1000 - . gene_id "MSTRG.52770"; transcript_id "MSTRG.52770.1"; exon_number "1"; scaffold_2464 StringTie exon 7747 7956 1000 - . gene_id "MSTRG.52770"; transcript_id "MSTRG.52770.1"; exon_number "2"; scaffold_2466 StringTie exon 86254 86839 1000 . . gene_id "MSTRG.52804"; transcript_id "MSTRG.52804.1"; exon_number "1"; scaffold_2466 StringTie exon 87732 87979 1000 . . gene_id "MSTRG.52805"; transcript_id "MSTRG.52805.1"; exon_number "1"; scaffold_24695 StringTie exon 1096 1482 1000 . . gene_id "MSTRG.52840"; transcript_id "MSTRG.52840.1"; exon_number "1"; scaffold_247 StringTie exon 31909 31937 1000 - . gene_id "MSTRG.52847"; transcript_id "MSTRG.52847.1"; exon_number "1"; scaffold_247 StringTie exon 32361 33002 1000 - . gene_id "MSTRG.52847"; transcript_id "MSTRG.52847.1"; exon_number "2"; scaffold_247 StringTie exon 233270 233440 1000 + . gene_id "MSTRG.52855"; transcript_id "MSTRG.52855.1"; exon_number "1"; scaffold_247 StringTie exon 244175 244219 1000 + . gene_id "MSTRG.52855"; transcript_id "MSTRG.52855.1"; exon_number "2"; scaffold_247 StringTie exon 253608 253626 1000 + . gene_id "MSTRG.52855"; transcript_id "MSTRG.52855.1"; exon_number "3"; scaffold_247 StringTie exon 416342 417489 1000 . . gene_id "MSTRG.52879"; transcript_id "MSTRG.52879.1"; exon_number "1"; scaffold_247 StringTie exon 418346 418400 1000 - . gene_id "MSTRG.52880"; transcript_id "MSTRG.52880.2"; exon_number "1"; scaffold_247 StringTie exon 418534 418624 1000 - . gene_id "MSTRG.52880"; transcript_id "MSTRG.52880.2"; exon_number "2"; scaffold_247 StringTie exon 418757 418850 1000 - . gene_id "MSTRG.52880"; transcript_id "MSTRG.52880.2"; exon_number "3"; scaffold_247 StringTie exon 425391 425439 1000 - . gene_id "MSTRG.52880"; transcript_id "MSTRG.52880.2"; exon_number "4"; scaffold_247 StringTie exon 425624 425712 1000 - . gene_id "MSTRG.52880"; transcript_id "MSTRG.52880.2"; exon_number "5"; scaffold_247 StringTie exon 425976 426066 1000 - . gene_id "MSTRG.52880"; transcript_id "MSTRG.52880.2"; exon_number "6"; scaffold_247 StringTie exon 582586 582772 1000 + . gene_id "MSTRG.52901"; transcript_id "MSTRG.52901.1"; exon_number "1"; scaffold_247 StringTie exon 583063 583143 1000 + . gene_id "MSTRG.52901"; transcript_id "MSTRG.52901.1"; exon_number "2"; scaffold_247 StringTie exon 600427 600641 1000 . . gene_id "MSTRG.52910"; transcript_id "MSTRG.52910.1"; exon_number "1"; scaffold_247 StringTie exon 628885 629057 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "1"; scaffold_247 StringTie exon 634128 634214 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "2"; scaffold_247 StringTie exon 634538 634614 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "3"; scaffold_247 StringTie exon 640327 640459 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "4"; scaffold_247 StringTie exon 640668 640742 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "5"; scaffold_247 StringTie exon 640857 640906 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "6"; scaffold_247 StringTie exon 642483 642557 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "7"; scaffold_247 StringTie exon 642705 642821 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "8"; scaffold_247 StringTie exon 644867 644984 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "9"; scaffold_247 StringTie exon 645354 645442 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "10"; scaffold_247 StringTie exon 645616 645735 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "11"; scaffold_247 StringTie exon 650428 650526 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "12"; scaffold_247 StringTie exon 650786 650872 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "13"; scaffold_247 StringTie exon 652744 652817 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "14"; scaffold_247 StringTie exon 652926 653000 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "15"; scaffold_247 StringTie exon 655775 655860 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "16"; scaffold_247 StringTie exon 656834 656923 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "17"; scaffold_247 StringTie exon 659264 659424 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "18"; scaffold_247 StringTie exon 659617 659681 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "19"; scaffold_247 StringTie exon 659804 659894 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "20"; scaffold_247 StringTie exon 667434 667623 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "21"; scaffold_247 StringTie exon 667843 667960 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "22"; scaffold_247 StringTie exon 669447 669507 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "23"; scaffold_247 StringTie exon 669714 670073 1000 + . gene_id "MSTRG.52913"; transcript_id "MSTRG.52913.1"; exon_number "24"; scaffold_247 StringTie exon 670644 671321 1000 . . gene_id "MSTRG.52914"; transcript_id "MSTRG.52914.1"; exon_number "1"; scaffold_247 StringTie exon 802017 802426 1000 - . gene_id "MSTRG.52929"; transcript_id "MSTRG.52929.2"; exon_number "1"; scaffold_247 StringTie exon 802585 802736 1000 - . gene_id "MSTRG.52929"; transcript_id "MSTRG.52929.2"; exon_number "2"; scaffold_247 StringTie exon 802916 803089 1000 - . gene_id "MSTRG.52929"; transcript_id "MSTRG.52929.2"; exon_number "3"; scaffold_247 StringTie exon 804025 804055 1000 - . gene_id "MSTRG.52929"; transcript_id "MSTRG.52929.2"; exon_number "4"; scaffold_247 StringTie exon 903139 904953 1000 . . gene_id "MSTRG.52931"; transcript_id "MSTRG.52931.1"; exon_number "1"; scaffold_2470 StringTie exon 48667 48912 1000 . . gene_id "MSTRG.52950"; transcript_id "MSTRG.52950.1"; exon_number "1"; scaffold_2470 StringTie exon 61309 61537 1000 . . gene_id "MSTRG.52951"; transcript_id "MSTRG.52951.1"; exon_number "1"; scaffold_2471 StringTie exon 55810 56105 1000 . . gene_id "MSTRG.52962"; transcript_id "MSTRG.52962.1"; exon_number "1"; scaffold_24715 StringTie exon 5239 5534 1000 . . gene_id "MSTRG.52968"; transcript_id "MSTRG.52968.1"; exon_number "1"; scaffold_2476 StringTie exon 42227 42485 1000 . . gene_id "MSTRG.53020"; transcript_id "MSTRG.53020.1"; exon_number "1"; scaffold_24792 StringTie exon 907 1157 1000 . . gene_id "MSTRG.53064"; transcript_id "MSTRG.53064.1"; exon_number "1"; scaffold_248 StringTie exon 355136 355374 1000 . . gene_id "MSTRG.53079"; transcript_id "MSTRG.53079.1"; exon_number "1"; scaffold_248 StringTie exon 999475 999699 1000 . . gene_id "MSTRG.53112"; transcript_id "MSTRG.53112.1"; exon_number "1"; scaffold_248 StringTie exon 1129075 1130320 1000 . . gene_id "MSTRG.53124"; transcript_id "MSTRG.53124.1"; exon_number "1"; scaffold_24803 StringTie exon 2507 2613 1000 - . gene_id "MSTRG.53133"; transcript_id "MSTRG.53133.1"; exon_number "1"; scaffold_24803 StringTie exon 4024 4082 1000 - . gene_id "MSTRG.53133"; transcript_id "MSTRG.53133.1"; exon_number "2"; scaffold_24803 StringTie exon 5101 5222 1000 - . gene_id "MSTRG.53133"; transcript_id "MSTRG.53133.1"; exon_number "3"; scaffold_2481 StringTie exon 48991 49826 1000 . . gene_id "MSTRG.53140"; transcript_id "MSTRG.53140.1"; exon_number "1"; scaffold_2482 StringTie exon 78675 79645 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "1"; scaffold_2482 StringTie exon 79797 79928 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "2"; scaffold_2482 StringTie exon 80275 80428 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "3"; scaffold_2482 StringTie exon 82871 82947 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "4"; scaffold_2482 StringTie exon 83287 83469 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "5"; scaffold_2482 StringTie exon 83870 84022 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "6"; scaffold_2482 StringTie exon 84652 84801 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "7"; scaffold_2482 StringTie exon 84888 84991 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "8"; scaffold_2482 StringTie exon 88423 88518 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "9"; scaffold_2482 StringTie exon 88713 88809 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "10"; scaffold_2482 StringTie exon 89446 89485 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "11"; scaffold_2482 StringTie exon 90396 90526 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "12"; scaffold_2482 StringTie exon 94888 95133 1000 - . gene_id "MSTRG.53155"; transcript_id "MSTRG.53155.1"; exon_number "13"; scaffold_2485 StringTie exon 28191 28631 1000 . . gene_id "MSTRG.53176"; transcript_id "MSTRG.53176.1"; exon_number "1"; scaffold_24850 StringTie exon 528 865 1000 . . gene_id "MSTRG.53182"; transcript_id "MSTRG.53182.1"; exon_number "1"; scaffold_24869 StringTie exon 4378 4680 1000 . . gene_id "MSTRG.53196"; transcript_id "MSTRG.53196.1"; exon_number "1"; scaffold_2487 StringTie exon 22656 22919 1000 . . gene_id "MSTRG.53197"; transcript_id "MSTRG.53197.1"; exon_number "1"; scaffold_2488 StringTie exon 91204 91641 1000 . . gene_id "MSTRG.53203"; transcript_id "MSTRG.53203.1"; exon_number "1"; scaffold_24890 StringTie exon 172 1107 1000 . . gene_id "MSTRG.53217"; transcript_id "MSTRG.53217.1"; exon_number "1"; scaffold_249 StringTie exon 74551 74642 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "1"; scaffold_249 StringTie exon 77500 77599 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "2"; scaffold_249 StringTie exon 78123 78163 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "3"; scaffold_249 StringTie exon 78296 78369 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "4"; scaffold_249 StringTie exon 78725 78776 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "5"; scaffold_249 StringTie exon 90242 90315 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "6"; scaffold_249 StringTie exon 94335 94372 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "7"; scaffold_249 StringTie exon 94460 94488 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "8"; scaffold_249 StringTie exon 101830 101898 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "9"; scaffold_249 StringTie exon 140235 140321 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "10"; scaffold_249 StringTie exon 141311 141885 1000 + . gene_id "MSTRG.53230"; transcript_id "MSTRG.53230.1"; exon_number "11"; scaffold_249 StringTie exon 214258 215121 1000 . . gene_id "MSTRG.53236"; transcript_id "MSTRG.53236.1"; exon_number "1"; scaffold_249 StringTie exon 229082 229315 1000 . . gene_id "MSTRG.53240"; transcript_id "MSTRG.53240.1"; exon_number "1"; scaffold_249 StringTie exon 534174 534390 1000 . . gene_id "MSTRG.53263"; transcript_id "MSTRG.53263.1"; exon_number "1"; scaffold_249 StringTie exon 563384 563937 1000 - . gene_id "MSTRG.53267"; transcript_id "MSTRG.53267.1"; exon_number "1"; scaffold_249 StringTie exon 564018 564068 1000 - . gene_id "MSTRG.53267"; transcript_id "MSTRG.53267.1"; exon_number "2"; scaffold_249 StringTie exon 623067 623216 1000 - . gene_id "MSTRG.53278"; transcript_id "MSTRG.53278.2"; exon_number "1"; scaffold_249 StringTie exon 623550 623669 1000 - . gene_id "MSTRG.53278"; transcript_id "MSTRG.53278.2"; exon_number "2"; scaffold_249 StringTie exon 623865 624050 1000 - . gene_id "MSTRG.53278"; transcript_id "MSTRG.53278.2"; exon_number "3"; scaffold_249 StringTie exon 624892 624924 1000 - . gene_id "MSTRG.53278"; transcript_id "MSTRG.53278.2"; exon_number "4"; scaffold_249 StringTie exon 659024 659139 1000 - . gene_id "MSTRG.53284"; transcript_id "MSTRG.53284.1"; exon_number "1"; scaffold_249 StringTie exon 660251 660367 1000 - . gene_id "MSTRG.53284"; transcript_id "MSTRG.53284.1"; exon_number "2"; scaffold_249 StringTie exon 666054 666121 1000 - . gene_id "MSTRG.53284"; transcript_id "MSTRG.53284.1"; exon_number "3"; scaffold_249 StringTie exon 669420 669908 1000 . . gene_id "MSTRG.53285"; transcript_id "MSTRG.53285.1"; exon_number "1"; scaffold_249 StringTie exon 844868 845251 1000 . . gene_id "MSTRG.53305"; transcript_id "MSTRG.53305.1"; exon_number "1"; scaffold_249 StringTie exon 1007507 1007795 1000 . . gene_id "MSTRG.53320"; transcript_id "MSTRG.53320.1"; exon_number "1"; scaffold_2490 StringTie exon 89095 89303 1000 . . gene_id "MSTRG.53334"; transcript_id "MSTRG.53334.1"; exon_number "1"; scaffold_24900 StringTie exon 4075 4323 1000 . . gene_id "MSTRG.53335"; transcript_id "MSTRG.53335.1"; exon_number "1"; scaffold_24912 StringTie exon 2204 3099 1000 - . gene_id "MSTRG.53355"; transcript_id "MSTRG.53355.1"; exon_number "1"; scaffold_24912 StringTie exon 3183 3259 1000 - . gene_id "MSTRG.53355"; transcript_id "MSTRG.53355.1"; exon_number "2"; scaffold_24912 StringTie exon 3456 3546 1000 - . gene_id "MSTRG.53355"; transcript_id "MSTRG.53355.1"; exon_number "3"; scaffold_24912 StringTie exon 3840 3982 1000 - . gene_id "MSTRG.53355"; transcript_id "MSTRG.53355.1"; exon_number "4"; scaffold_24921 StringTie exon 5132 5522 1000 . . gene_id "MSTRG.53367"; transcript_id "MSTRG.53367.1"; exon_number "1"; scaffold_2497 StringTie exon 17462 19340 1000 . . gene_id "MSTRG.53420"; transcript_id "MSTRG.53420.1"; exon_number "1"; scaffold_24971 StringTie exon 2535 2815 1000 . . gene_id "MSTRG.53436"; transcript_id "MSTRG.53436.1"; exon_number "1"; scaffold_24983 StringTie exon 3121 3393 1000 . . gene_id "MSTRG.53452"; transcript_id "MSTRG.53452.1"; exon_number "1"; scaffold_2499 StringTie exon 58262 58685 1000 . . gene_id "MSTRG.53458"; transcript_id "MSTRG.53458.1"; exon_number "1"; scaffold_25 StringTie exon 101272 101513 1000 . . gene_id "MSTRG.53477"; transcript_id "MSTRG.53477.1"; exon_number "1"; scaffold_25 StringTie exon 202201 202454 1000 - . gene_id "MSTRG.53485"; transcript_id "MSTRG.53485.1"; exon_number "1"; scaffold_25 StringTie exon 202632 202762 1000 - . gene_id "MSTRG.53485"; transcript_id "MSTRG.53485.1"; exon_number "2"; scaffold_25 StringTie exon 203159 203300 1000 - . gene_id "MSTRG.53485"; transcript_id "MSTRG.53485.1"; exon_number "3"; scaffold_25 StringTie exon 250306 250526 1000 . . gene_id "MSTRG.53498"; transcript_id "MSTRG.53498.1"; exon_number "1"; scaffold_25 StringTie exon 550586 550809 1000 . . gene_id "MSTRG.53514"; transcript_id "MSTRG.53514.1"; exon_number "1"; scaffold_25 StringTie exon 759725 760858 1000 - . gene_id "MSTRG.53546"; transcript_id "MSTRG.53546.1"; exon_number "1"; scaffold_25 StringTie exon 761057 761187 1000 - . gene_id "MSTRG.53546"; transcript_id "MSTRG.53546.1"; exon_number "2"; scaffold_25 StringTie exon 761615 762064 1000 - . gene_id "MSTRG.53546"; transcript_id "MSTRG.53546.1"; exon_number "3"; scaffold_25 StringTie exon 918115 918474 1000 + . gene_id "MSTRG.53555"; transcript_id "MSTRG.53555.1"; exon_number "1"; scaffold_25 StringTie exon 920583 920713 1000 + . gene_id "MSTRG.53555"; transcript_id "MSTRG.53555.1"; exon_number "2"; scaffold_25 StringTie exon 920911 920944 1000 + . gene_id "MSTRG.53555"; transcript_id "MSTRG.53555.1"; exon_number "3"; scaffold_25 StringTie exon 921346 921551 1000 . . gene_id "MSTRG.53556"; transcript_id "MSTRG.53556.1"; exon_number "1"; scaffold_25 StringTie exon 1059952 1060062 1000 + . gene_id "MSTRG.53570"; transcript_id "MSTRG.53570.1"; exon_number "1"; scaffold_25 StringTie exon 1061084 1061297 1000 + . gene_id "MSTRG.53570"; transcript_id "MSTRG.53570.1"; exon_number "2"; scaffold_25 StringTie exon 1263623 1263841 1000 . . gene_id "MSTRG.53602"; transcript_id "MSTRG.53602.1"; exon_number "1"; scaffold_25 StringTie exon 1282404 1282755 1000 - . gene_id "MSTRG.53607"; transcript_id "MSTRG.53607.1"; exon_number "1"; scaffold_25 StringTie exon 1282934 1283045 1000 - . gene_id "MSTRG.53607"; transcript_id "MSTRG.53607.1"; exon_number "2"; scaffold_25 StringTie exon 1283306 1283358 1000 - . gene_id "MSTRG.53607"; transcript_id "MSTRG.53607.1"; exon_number "3"; scaffold_25 StringTie exon 1409068 1409514 1000 . . gene_id "MSTRG.53622"; transcript_id "MSTRG.53622.1"; exon_number "1"; scaffold_25 StringTie exon 1664858 1665083 1000 . . gene_id "MSTRG.53640"; transcript_id "MSTRG.53640.1"; exon_number "1"; scaffold_25 StringTie exon 1815459 1815633 1000 - . gene_id "MSTRG.53661"; transcript_id "MSTRG.53661.1"; exon_number "1"; scaffold_25 StringTie exon 1816132 1816299 1000 - . gene_id "MSTRG.53661"; transcript_id "MSTRG.53661.1"; exon_number "2"; scaffold_25 StringTie exon 1816491 1816621 1000 - . gene_id "MSTRG.53661"; transcript_id "MSTRG.53661.1"; exon_number "3"; scaffold_25 StringTie exon 1818438 1818841 1000 - . gene_id "MSTRG.53661"; transcript_id "MSTRG.53661.1"; exon_number "4"; scaffold_25 StringTie exon 1958275 1958589 1000 + . gene_id "MSTRG.53665"; transcript_id "MSTRG.53665.1"; exon_number "1"; scaffold_25 StringTie exon 1969162 1969223 1000 + . gene_id "MSTRG.53665"; transcript_id "MSTRG.53665.1"; exon_number "2"; scaffold_25 StringTie exon 2014480 2014723 1000 . . gene_id "MSTRG.53668"; transcript_id "MSTRG.53668.1"; exon_number "1"; scaffold_25 StringTie exon 2076907 2077440 1000 . . gene_id "MSTRG.53675"; transcript_id "MSTRG.53675.1"; exon_number "1"; scaffold_25 StringTie exon 2144103 2144348 1000 . . gene_id "MSTRG.53682"; transcript_id "MSTRG.53682.1"; exon_number "1"; scaffold_25 StringTie exon 2336815 2337180 1000 . . gene_id "MSTRG.53699"; transcript_id "MSTRG.53699.1"; exon_number "1"; scaffold_25 StringTie exon 2525066 2525290 1000 . . gene_id "MSTRG.53714"; transcript_id "MSTRG.53714.1"; exon_number "1"; scaffold_250 StringTie exon 106512 106553 1000 - . gene_id "MSTRG.53728"; transcript_id "MSTRG.53728.1"; exon_number "1"; scaffold_250 StringTie exon 107311 107444 1000 - . gene_id "MSTRG.53728"; transcript_id "MSTRG.53728.1"; exon_number "2"; scaffold_250 StringTie exon 107591 107660 1000 - . gene_id "MSTRG.53728"; transcript_id "MSTRG.53728.1"; exon_number "3"; scaffold_250 StringTie exon 272064 272381 1000 . . gene_id "MSTRG.53743"; transcript_id "MSTRG.53743.1"; exon_number "1"; scaffold_250 StringTie exon 408466 408625 1000 + . gene_id "MSTRG.53760"; transcript_id "MSTRG.53760.1"; exon_number "1"; scaffold_250 StringTie exon 408975 409081 1000 + . gene_id "MSTRG.53760"; transcript_id "MSTRG.53760.1"; exon_number "2"; scaffold_250 StringTie exon 464317 464672 1000 + . gene_id "MSTRG.53762"; transcript_id "MSTRG.53762.1"; exon_number "1"; scaffold_250 StringTie exon 464879 464947 1000 + . gene_id "MSTRG.53762"; transcript_id "MSTRG.53762.1"; exon_number "2"; scaffold_250 StringTie exon 465422 465694 1000 + . gene_id "MSTRG.53762"; transcript_id "MSTRG.53762.1"; exon_number "3"; scaffold_250 StringTie exon 831336 831930 1000 . . gene_id "MSTRG.53800"; transcript_id "MSTRG.53800.1"; exon_number "1"; scaffold_2502 StringTie exon 10170 10231 1000 - . gene_id "MSTRG.53857"; transcript_id "MSTRG.53857.1"; exon_number "1"; scaffold_2502 StringTie exon 10339 10430 1000 - . gene_id "MSTRG.53857"; transcript_id "MSTRG.53857.1"; exon_number "2"; scaffold_2502 StringTie exon 10603 10725 1000 - . gene_id "MSTRG.53857"; transcript_id "MSTRG.53857.1"; exon_number "3"; scaffold_2502 StringTie exon 10884 11025 1000 - . gene_id "MSTRG.53857"; transcript_id "MSTRG.53857.1"; exon_number "4"; scaffold_2502 StringTie exon 11189 11354 1000 - . gene_id "MSTRG.53857"; transcript_id "MSTRG.53857.1"; exon_number "5"; scaffold_2502 StringTie exon 11618 11687 1000 - . gene_id "MSTRG.53857"; transcript_id "MSTRG.53857.1"; exon_number "6"; scaffold_2502 StringTie exon 48494 48673 1000 - . gene_id "MSTRG.53863"; transcript_id "MSTRG.53863.1"; exon_number "1"; scaffold_2502 StringTie exon 48896 48979 1000 - . gene_id "MSTRG.53863"; transcript_id "MSTRG.53863.1"; exon_number "2"; scaffold_2502 StringTie exon 49138 49218 1000 - . gene_id "MSTRG.53863"; transcript_id "MSTRG.53863.1"; exon_number "3"; scaffold_2502 StringTie exon 49368 49451 1000 - . gene_id "MSTRG.53863"; transcript_id "MSTRG.53863.1"; exon_number "4"; scaffold_2502 StringTie exon 49560 49645 1000 - . gene_id "MSTRG.53863"; transcript_id "MSTRG.53863.1"; exon_number "5"; scaffold_2503 StringTie exon 63059 63449 1000 . . gene_id "MSTRG.53880"; transcript_id "MSTRG.53880.1"; exon_number "1"; scaffold_2507 StringTie exon 62427 63460 1000 . . gene_id "MSTRG.53924"; transcript_id "MSTRG.53924.1"; exon_number "1"; scaffold_25088 StringTie exon 1069 1148 1000 - . gene_id "MSTRG.53932"; transcript_id "MSTRG.53932.1"; exon_number "1"; scaffold_25088 StringTie exon 1611 1774 1000 - . gene_id "MSTRG.53932"; transcript_id "MSTRG.53932.1"; exon_number "2"; scaffold_25089 StringTie exon 1005 1279 1000 . . gene_id "MSTRG.53934"; transcript_id "MSTRG.53934.1"; exon_number "1"; scaffold_25093 StringTie exon 4228 4448 1000 . . gene_id "MSTRG.53945"; transcript_id "MSTRG.53945.1"; exon_number "1"; scaffold_251 StringTie exon 486963 487626 1000 . . gene_id "MSTRG.53982"; transcript_id "MSTRG.53982.1"; exon_number "1"; scaffold_251 StringTie exon 561612 561843 1000 . . gene_id "MSTRG.53987"; transcript_id "MSTRG.53987.1"; exon_number "1"; scaffold_25115 StringTie exon 866 1212 1000 . . gene_id "MSTRG.54049"; transcript_id "MSTRG.54049.1"; exon_number "1"; scaffold_2512 StringTie exon 2609 3681 1000 . . gene_id "MSTRG.54055"; transcript_id "MSTRG.54055.1"; exon_number "1"; scaffold_2512 StringTie exon 89744 90525 1000 - . gene_id "MSTRG.54070"; transcript_id "MSTRG.54070.1"; exon_number "1"; scaffold_25124 StringTie exon 3699 4007 1000 . . gene_id "MSTRG.54074"; transcript_id "MSTRG.54074.1"; exon_number "1"; scaffold_25153 StringTie exon 1984 2226 1000 . . gene_id "MSTRG.54101"; transcript_id "MSTRG.54101.1"; exon_number "1"; scaffold_252 StringTie exon 40614 40897 1000 . . gene_id "MSTRG.54148"; transcript_id "MSTRG.54148.1"; exon_number "1"; scaffold_252 StringTie exon 185874 186106 1000 - . gene_id "MSTRG.54164"; transcript_id "MSTRG.54164.1"; exon_number "1"; scaffold_252 StringTie exon 326726 326945 1000 . . gene_id "MSTRG.54169"; transcript_id "MSTRG.54169.1"; exon_number "1"; scaffold_252 StringTie exon 677275 677538 1000 . . gene_id "MSTRG.54189"; transcript_id "MSTRG.54189.1"; exon_number "1"; scaffold_252 StringTie exon 1090628 1090773 1000 + . gene_id "MSTRG.54211"; transcript_id "MSTRG.54211.1"; exon_number "1"; scaffold_252 StringTie exon 1092488 1092634 1000 + . gene_id "MSTRG.54211"; transcript_id "MSTRG.54211.1"; exon_number "2"; scaffold_252 StringTie exon 1093292 1093553 1000 + . gene_id "MSTRG.54211"; transcript_id "MSTRG.54211.1"; exon_number "3"; scaffold_2520 StringTie exon 6489 6692 1000 . . gene_id "MSTRG.54215"; transcript_id "MSTRG.54215.1"; exon_number "1"; scaffold_25201 StringTie exon 209 440 1000 . . gene_id "MSTRG.54222"; transcript_id "MSTRG.54222.1"; exon_number "1"; scaffold_2521 StringTie exon 60809 61058 1000 . . gene_id "MSTRG.54227"; transcript_id "MSTRG.54227.1"; exon_number "1"; scaffold_25210 StringTie exon 1775 2891 1000 . . gene_id "MSTRG.54231"; transcript_id "MSTRG.54231.1"; exon_number "1"; scaffold_2525 StringTie exon 62795 62912 1000 + . gene_id "MSTRG.54270"; transcript_id "MSTRG.54270.2"; exon_number "1"; scaffold_2525 StringTie exon 63196 63282 1000 + . gene_id "MSTRG.54270"; transcript_id "MSTRG.54270.2"; exon_number "2"; scaffold_2525 StringTie exon 63420 63566 1000 + . gene_id "MSTRG.54270"; transcript_id "MSTRG.54270.2"; exon_number "3"; scaffold_2525 StringTie exon 67335 68289 1000 + . gene_id "MSTRG.54270"; transcript_id "MSTRG.54270.2"; exon_number "4"; scaffold_2526 StringTie exon 65546 65817 1000 . . gene_id "MSTRG.54289"; transcript_id "MSTRG.54289.1"; exon_number "1"; scaffold_25283 StringTie exon 201 286 1000 + . gene_id "MSTRG.54309"; transcript_id "MSTRG.54309.1"; exon_number "1"; scaffold_25283 StringTie exon 722 842 1000 + . gene_id "MSTRG.54309"; transcript_id "MSTRG.54309.1"; exon_number "2"; scaffold_2529 StringTie exon 75061 75408 1000 . . gene_id "MSTRG.54315"; transcript_id "MSTRG.54315.1"; exon_number "1"; scaffold_253 StringTie exon 92698 94524 1000 - . gene_id "MSTRG.54331"; transcript_id "MSTRG.54331.1"; exon_number "1"; scaffold_253 StringTie exon 94697 94739 1000 - . gene_id "MSTRG.54331"; transcript_id "MSTRG.54331.1"; exon_number "2"; scaffold_253 StringTie exon 94841 95014 1000 - . gene_id "MSTRG.54331"; transcript_id "MSTRG.54331.1"; exon_number "3"; scaffold_253 StringTie exon 97732 97935 1000 - . gene_id "MSTRG.54331"; transcript_id "MSTRG.54331.1"; exon_number "4"; scaffold_253 StringTie exon 239743 240188 1000 . . gene_id "MSTRG.54338"; transcript_id "MSTRG.54338.1"; exon_number "1"; scaffold_253 StringTie exon 265930 266267 1000 . . gene_id "MSTRG.54340"; transcript_id "MSTRG.54340.1"; exon_number "1"; scaffold_253 StringTie exon 382031 382350 1000 . . gene_id "MSTRG.54348"; transcript_id "MSTRG.54348.1"; exon_number "1"; scaffold_253 StringTie exon 389123 389452 1000 . . gene_id "MSTRG.54351"; transcript_id "MSTRG.54351.1"; exon_number "1"; scaffold_253 StringTie exon 448068 448275 1000 + . gene_id "MSTRG.54355"; transcript_id "MSTRG.54355.2"; exon_number "1"; scaffold_253 StringTie exon 455346 455435 1000 + . gene_id "MSTRG.54355"; transcript_id "MSTRG.54355.2"; exon_number "2"; scaffold_253 StringTie exon 458380 458739 1000 + . gene_id "MSTRG.54355"; transcript_id "MSTRG.54355.2"; exon_number "3"; scaffold_253 StringTie exon 478917 479336 1000 . . gene_id "MSTRG.54359"; transcript_id "MSTRG.54359.1"; exon_number "1"; scaffold_253 StringTie exon 539741 540092 1000 . . gene_id "MSTRG.54371"; transcript_id "MSTRG.54371.1"; exon_number "1"; scaffold_253 StringTie exon 552614 553152 1000 . . gene_id "MSTRG.54373"; transcript_id "MSTRG.54373.1"; exon_number "1"; scaffold_253 StringTie exon 726683 726765 1000 + . gene_id "MSTRG.54383"; transcript_id "MSTRG.54383.1"; exon_number "1"; scaffold_253 StringTie exon 726895 726976 1000 + . gene_id "MSTRG.54383"; transcript_id "MSTRG.54383.1"; exon_number "2"; scaffold_253 StringTie exon 728791 728968 1000 + . gene_id "MSTRG.54383"; transcript_id "MSTRG.54383.1"; exon_number "3"; scaffold_253 StringTie exon 905929 906233 1000 . . gene_id "MSTRG.54396"; transcript_id "MSTRG.54396.1"; exon_number "1"; scaffold_253 StringTie exon 992014 992280 1000 . . gene_id "MSTRG.54402"; transcript_id "MSTRG.54402.1"; exon_number "1"; scaffold_253 StringTie exon 1086212 1086446 1000 . . gene_id "MSTRG.54411"; transcript_id "MSTRG.54411.1"; exon_number "1"; scaffold_25307 StringTie exon 3607 4441 1000 . . gene_id "MSTRG.54428"; transcript_id "MSTRG.54428.1"; exon_number "1"; scaffold_2531 StringTie exon 4975 5571 1000 . . gene_id "MSTRG.54429"; transcript_id "MSTRG.54429.1"; exon_number "1"; scaffold_25322 StringTie exon 3643 3865 1000 . . gene_id "MSTRG.54451"; transcript_id "MSTRG.54451.1"; exon_number "1"; scaffold_2533 StringTie exon 29613 29822 1000 . . gene_id "MSTRG.54456"; transcript_id "MSTRG.54456.1"; exon_number "1"; scaffold_25378 StringTie exon 2955 3441 1000 . . gene_id "MSTRG.54508"; transcript_id "MSTRG.54508.1"; exon_number "1"; scaffold_25384 StringTie exon 676 1081 1000 . . gene_id "MSTRG.54518"; transcript_id "MSTRG.54518.1"; exon_number "1"; scaffold_2539 StringTie exon 92687 93005 1000 + . gene_id "MSTRG.54528"; transcript_id "MSTRG.54528.1"; exon_number "1"; scaffold_254 StringTie exon 72852 72933 1000 + . gene_id "MSTRG.54538"; transcript_id "MSTRG.54538.2"; exon_number "1"; scaffold_254 StringTie exon 73219 73289 1000 + . gene_id "MSTRG.54538"; transcript_id "MSTRG.54538.2"; exon_number "2"; scaffold_254 StringTie exon 73378 73432 1000 + . gene_id "MSTRG.54538"; transcript_id "MSTRG.54538.2"; exon_number "3"; scaffold_254 StringTie exon 253728 253967 1000 . . gene_id "MSTRG.54549"; transcript_id "MSTRG.54549.1"; exon_number "1"; scaffold_254 StringTie exon 781798 782041 1000 . . gene_id "MSTRG.54581"; transcript_id "MSTRG.54581.1"; exon_number "1"; scaffold_254 StringTie exon 845397 845604 1000 . . gene_id "MSTRG.54589"; transcript_id "MSTRG.54589.1"; exon_number "1"; scaffold_254 StringTie exon 970763 970964 1000 . . gene_id "MSTRG.54595"; transcript_id "MSTRG.54595.1"; exon_number "1"; scaffold_254 StringTie exon 971299 971534 1000 + . gene_id "MSTRG.54596"; transcript_id "MSTRG.54596.1"; exon_number "1"; scaffold_254 StringTie exon 993006 993097 1000 + . gene_id "MSTRG.54596"; transcript_id "MSTRG.54596.1"; exon_number "2"; scaffold_254 StringTie exon 994258 994369 1000 + . gene_id "MSTRG.54596"; transcript_id "MSTRG.54596.1"; exon_number "3"; scaffold_254 StringTie exon 994516 994587 1000 + . gene_id "MSTRG.54596"; transcript_id "MSTRG.54596.1"; exon_number "4"; scaffold_254 StringTie exon 995230 995337 1000 + . gene_id "MSTRG.54596"; transcript_id "MSTRG.54596.1"; exon_number "5"; scaffold_254 StringTie exon 1001193 1001720 1000 + . gene_id "MSTRG.54596"; transcript_id "MSTRG.54596.1"; exon_number "6"; scaffold_25431 StringTie exon 2198 2441 1000 . . gene_id "MSTRG.54646"; transcript_id "MSTRG.54646.1"; exon_number "1"; scaffold_2545 StringTie exon 16640 16884 1000 . . gene_id "MSTRG.54669"; transcript_id "MSTRG.54669.1"; exon_number "1"; scaffold_25455 StringTie exon 1536 1782 1000 . . gene_id "MSTRG.54679"; transcript_id "MSTRG.54679.1"; exon_number "1"; scaffold_2547 StringTie exon 91052 91349 1000 . . gene_id "MSTRG.54703"; transcript_id "MSTRG.54703.1"; exon_number "1"; scaffold_25496 StringTie exon 1706 3227 1000 . . gene_id "MSTRG.54729"; transcript_id "MSTRG.54729.1"; exon_number "1"; scaffold_255 StringTie exon 209155 209272 1000 + . gene_id "MSTRG.54750"; transcript_id "MSTRG.54750.1"; exon_number "1"; scaffold_255 StringTie exon 209637 209661 1000 + . gene_id "MSTRG.54750"; transcript_id "MSTRG.54750.1"; exon_number "2"; scaffold_255 StringTie exon 209954 210075 1000 + . gene_id "MSTRG.54750"; transcript_id "MSTRG.54750.1"; exon_number "3"; scaffold_255 StringTie exon 210313 210395 1000 + . gene_id "MSTRG.54750"; transcript_id "MSTRG.54750.1"; exon_number "4"; scaffold_255 StringTie exon 210782 210834 1000 + . gene_id "MSTRG.54750"; transcript_id "MSTRG.54750.1"; exon_number "5"; scaffold_255 StringTie exon 211122 211158 1000 + . gene_id "MSTRG.54750"; transcript_id "MSTRG.54750.1"; exon_number "6"; scaffold_255 StringTie exon 211402 212036 1000 + . gene_id "MSTRG.54750"; transcript_id "MSTRG.54750.1"; exon_number "7"; scaffold_255 StringTie exon 317648 317874 1000 . . gene_id "MSTRG.54757"; transcript_id "MSTRG.54757.1"; exon_number "1"; scaffold_255 StringTie exon 405775 406065 1000 . . gene_id "MSTRG.54760"; transcript_id "MSTRG.54760.1"; exon_number "1"; scaffold_255 StringTie exon 755037 755055 1000 - . gene_id "MSTRG.54786"; transcript_id "MSTRG.54786.1"; exon_number "1"; scaffold_255 StringTie exon 756280 756408 1000 - . gene_id "MSTRG.54786"; transcript_id "MSTRG.54786.1"; exon_number "2"; scaffold_255 StringTie exon 779812 779979 1000 - . gene_id "MSTRG.54786"; transcript_id "MSTRG.54786.1"; exon_number "3"; scaffold_255 StringTie exon 790670 790898 1000 - . gene_id "MSTRG.54786"; transcript_id "MSTRG.54786.1"; exon_number "4"; scaffold_2551 StringTie exon 7736 8003 1000 . . gene_id "MSTRG.54834"; transcript_id "MSTRG.54834.1"; exon_number "1"; scaffold_2552 StringTie exon 78250 78561 1000 . . gene_id "MSTRG.54849"; transcript_id "MSTRG.54849.1"; exon_number "1"; scaffold_25524 StringTie exon 3652 4363 1000 . . gene_id "MSTRG.54855"; transcript_id "MSTRG.54855.1"; exon_number "1"; scaffold_25527 StringTie exon 104 226 1000 + . gene_id "MSTRG.54856"; transcript_id "MSTRG.54856.1"; exon_number "1"; scaffold_25527 StringTie exon 651 826 1000 + . gene_id "MSTRG.54856"; transcript_id "MSTRG.54856.1"; exon_number "2"; scaffold_25530 StringTie exon 4179 4450 1000 . . gene_id "MSTRG.54870"; transcript_id "MSTRG.54870.1"; exon_number "1"; scaffold_2554 StringTie exon 77929 78026 1000 - . gene_id "MSTRG.54882"; transcript_id "MSTRG.54882.1"; exon_number "1"; scaffold_2554 StringTie exon 84570 85049 1000 - . gene_id "MSTRG.54882"; transcript_id "MSTRG.54882.1"; exon_number "2"; scaffold_25543 StringTie exon 101 270 1000 - . gene_id "MSTRG.54888"; transcript_id "MSTRG.54888.1"; exon_number "1"; scaffold_25543 StringTie exon 1975 2057 1000 - . gene_id "MSTRG.54888"; transcript_id "MSTRG.54888.1"; exon_number "2"; scaffold_25543 StringTie exon 4122 4511 1000 - . gene_id "MSTRG.54888"; transcript_id "MSTRG.54888.1"; exon_number "3"; scaffold_25590 StringTie exon 4684 4940 1000 . . gene_id "MSTRG.54949"; transcript_id "MSTRG.54949.1"; exon_number "1"; scaffold_256 StringTie exon 222024 222341 1000 . . gene_id "MSTRG.54975"; transcript_id "MSTRG.54975.1"; exon_number "1"; scaffold_256 StringTie exon 633224 633685 1000 . . gene_id "MSTRG.54994"; transcript_id "MSTRG.54994.1"; exon_number "1"; scaffold_25613 StringTie exon 11 231 1000 . . gene_id "MSTRG.55031"; transcript_id "MSTRG.55031.1"; exon_number "1"; scaffold_2562 StringTie exon 56105 56203 1000 - . gene_id "MSTRG.55039"; transcript_id "MSTRG.55039.2"; exon_number "1"; scaffold_2562 StringTie exon 57404 57457 1000 - . gene_id "MSTRG.55039"; transcript_id "MSTRG.55039.2"; exon_number "2"; scaffold_2562 StringTie exon 61696 61866 1000 - . gene_id "MSTRG.55039"; transcript_id "MSTRG.55039.2"; exon_number "3"; scaffold_2562 StringTie exon 62485 62537 1000 - . gene_id "MSTRG.55039"; transcript_id "MSTRG.55039.2"; exon_number "4"; scaffold_2562 StringTie exon 64144 64200 1000 - . gene_id "MSTRG.55039"; transcript_id "MSTRG.55039.2"; exon_number "5"; scaffold_2562 StringTie exon 66326 66697 1000 - . gene_id "MSTRG.55039"; transcript_id "MSTRG.55039.2"; exon_number "6"; scaffold_2564 StringTie exon 20805 21034 1000 . . gene_id "MSTRG.55054"; transcript_id "MSTRG.55054.1"; exon_number "1"; scaffold_25641 StringTie exon 1484 1720 1000 . . gene_id "MSTRG.55057"; transcript_id "MSTRG.55057.1"; exon_number "1"; scaffold_2565 StringTie exon 2832 3098 1000 . . gene_id "MSTRG.55062"; transcript_id "MSTRG.55062.1"; exon_number "1"; scaffold_25653 StringTie exon 1291 1601 1000 . . gene_id "MSTRG.55069"; transcript_id "MSTRG.55069.1"; exon_number "1"; scaffold_2566 StringTie exon 45239 45466 1000 . . gene_id "MSTRG.55071"; transcript_id "MSTRG.55071.1"; exon_number "1"; scaffold_2568 StringTie exon 66429 66527 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "1"; scaffold_2568 StringTie exon 66761 66855 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "2"; scaffold_2568 StringTie exon 66967 67069 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "3"; scaffold_2568 StringTie exon 67242 67344 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "4"; scaffold_2568 StringTie exon 67602 67665 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "5"; scaffold_2568 StringTie exon 67779 67888 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "6"; scaffold_2568 StringTie exon 69198 69334 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "7"; scaffold_2568 StringTie exon 69530 69596 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "8"; scaffold_2568 StringTie exon 69743 69874 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "9"; scaffold_2568 StringTie exon 70080 70231 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "10"; scaffold_2568 StringTie exon 71068 71182 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "11"; scaffold_2568 StringTie exon 71377 71709 1000 + . gene_id "MSTRG.55097"; transcript_id "MSTRG.55097.1"; exon_number "12"; scaffold_257 StringTie exon 235715 235806 1000 - . gene_id "MSTRG.55142"; transcript_id "MSTRG.55142.1"; exon_number "1"; scaffold_257 StringTie exon 236808 237178 1000 - . gene_id "MSTRG.55142"; transcript_id "MSTRG.55142.1"; exon_number "2"; scaffold_257 StringTie exon 310758 311037 1000 . . gene_id "MSTRG.55146"; transcript_id "MSTRG.55146.1"; exon_number "1"; scaffold_257 StringTie exon 363184 363414 1000 . . gene_id "MSTRG.55152"; transcript_id "MSTRG.55152.1"; exon_number "1"; scaffold_257 StringTie exon 383855 383869 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "1"; scaffold_257 StringTie exon 384641 384695 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "2"; scaffold_257 StringTie exon 386259 386349 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "3"; scaffold_257 StringTie exon 386682 386834 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "4"; scaffold_257 StringTie exon 391088 391630 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "5"; scaffold_257 StringTie exon 391749 391871 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "6"; scaffold_257 StringTie exon 391966 392067 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "7"; scaffold_257 StringTie exon 392158 392399 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "8"; scaffold_257 StringTie exon 392577 392726 1000 + . gene_id "MSTRG.55154"; transcript_id "MSTRG.55154.2"; exon_number "9"; scaffold_257 StringTie exon 686001 686205 1000 + . gene_id "MSTRG.55181"; transcript_id "MSTRG.55181.1"; exon_number "1"; scaffold_257 StringTie exon 686824 686894 1000 + . gene_id "MSTRG.55181"; transcript_id "MSTRG.55181.1"; exon_number "2"; scaffold_257 StringTie exon 828853 829197 1000 - . gene_id "MSTRG.55191"; transcript_id "MSTRG.55191.1"; exon_number "1"; scaffold_257 StringTie exon 829339 830026 1000 - . gene_id "MSTRG.55191"; transcript_id "MSTRG.55191.1"; exon_number "2"; scaffold_257 StringTie exon 830328 830452 1000 - . gene_id "MSTRG.55191"; transcript_id "MSTRG.55191.1"; exon_number "3"; scaffold_257 StringTie exon 830700 831055 1000 - . gene_id "MSTRG.55191"; transcript_id "MSTRG.55191.1"; exon_number "4"; scaffold_257 StringTie exon 831949 832264 1000 . . gene_id "MSTRG.55192"; transcript_id "MSTRG.55192.1"; exon_number "1"; scaffold_257 StringTie exon 840804 841037 1000 . . gene_id "MSTRG.55194"; transcript_id "MSTRG.55194.1"; exon_number "1"; scaffold_257 StringTie exon 1065966 1066099 1000 + . gene_id "MSTRG.55213"; transcript_id "MSTRG.55213.1"; exon_number "1"; scaffold_257 StringTie exon 1109166 1109290 1000 + . gene_id "MSTRG.55213"; transcript_id "MSTRG.55213.1"; exon_number "2"; scaffold_257 StringTie exon 1111263 1111467 1000 + . gene_id "MSTRG.55213"; transcript_id "MSTRG.55213.1"; exon_number "3"; scaffold_2571 StringTie exon 7004 7491 1000 - . gene_id "MSTRG.55237"; transcript_id "MSTRG.55237.1"; exon_number "1"; scaffold_2571 StringTie exon 9220 9290 1000 - . gene_id "MSTRG.55237"; transcript_id "MSTRG.55237.1"; exon_number "2"; scaffold_2571 StringTie exon 9638 9717 1000 - . gene_id "MSTRG.55237"; transcript_id "MSTRG.55237.1"; exon_number "3"; scaffold_2571 StringTie exon 10434 10507 1000 - . gene_id "MSTRG.55237"; transcript_id "MSTRG.55237.1"; exon_number "4"; scaffold_2571 StringTie exon 19774 19825 1000 - . gene_id "MSTRG.55237"; transcript_id "MSTRG.55237.1"; exon_number "5"; scaffold_2571 StringTie exon 20697 20856 1000 - . gene_id "MSTRG.55237"; transcript_id "MSTRG.55237.1"; exon_number "6"; scaffold_25712 StringTie exon 165 627 1000 . . gene_id "MSTRG.55245"; transcript_id "MSTRG.55245.1"; exon_number "1"; scaffold_25736 StringTie exon 3688 3969 1000 . . gene_id "MSTRG.55267"; transcript_id "MSTRG.55267.1"; exon_number "1"; scaffold_2575 StringTie exon 60495 60845 1000 . . gene_id "MSTRG.55286"; transcript_id "MSTRG.55286.1"; exon_number "1"; scaffold_25788 StringTie exon 541 1469 1000 . . gene_id "MSTRG.55318"; transcript_id "MSTRG.55318.1"; exon_number "1"; scaffold_25796 StringTie exon 1812 2162 1000 . . gene_id "MSTRG.55333"; transcript_id "MSTRG.55333.1"; exon_number "1"; scaffold_258 StringTie exon 37197 37412 1000 . . gene_id "MSTRG.55337"; transcript_id "MSTRG.55337.1"; exon_number "1"; scaffold_258 StringTie exon 143669 144527 1000 - . gene_id "MSTRG.55343"; transcript_id "MSTRG.55343.1"; exon_number "1"; scaffold_258 StringTie exon 145360 145550 1000 - . gene_id "MSTRG.55343"; transcript_id "MSTRG.55343.1"; exon_number "2"; scaffold_258 StringTie exon 146018 146199 1000 - . gene_id "MSTRG.55343"; transcript_id "MSTRG.55343.1"; exon_number "3"; scaffold_258 StringTie exon 146523 146640 1000 - . gene_id "MSTRG.55343"; transcript_id "MSTRG.55343.1"; exon_number "4"; scaffold_258 StringTie exon 147175 147280 1000 - . gene_id "MSTRG.55343"; transcript_id "MSTRG.55343.1"; exon_number "5"; scaffold_258 StringTie exon 147540 147827 1000 - . gene_id "MSTRG.55343"; transcript_id "MSTRG.55343.1"; exon_number "6"; scaffold_258 StringTie exon 148015 148040 1000 - . gene_id "MSTRG.55343"; transcript_id "MSTRG.55343.1"; exon_number "7"; scaffold_258 StringTie exon 299785 300149 1000 . . gene_id "MSTRG.55365"; transcript_id "MSTRG.55365.1"; exon_number "1"; scaffold_258 StringTie exon 416331 417030 1000 . . gene_id "MSTRG.55372"; transcript_id "MSTRG.55372.1"; exon_number "1"; scaffold_258 StringTie exon 897290 897439 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "1"; scaffold_258 StringTie exon 897643 897776 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "2"; scaffold_258 StringTie exon 898135 898229 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "3"; scaffold_258 StringTie exon 901642 901845 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "4"; scaffold_258 StringTie exon 902010 902102 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "5"; scaffold_258 StringTie exon 902750 902872 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "6"; scaffold_258 StringTie exon 903096 903183 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "7"; scaffold_258 StringTie exon 914911 915087 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "8"; scaffold_258 StringTie exon 916132 916248 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "9"; scaffold_258 StringTie exon 921914 922062 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "10"; scaffold_258 StringTie exon 922405 922514 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "11"; scaffold_258 StringTie exon 926443 926632 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "12"; scaffold_258 StringTie exon 926976 927059 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "13"; scaffold_258 StringTie exon 929997 930141 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "14"; scaffold_258 StringTie exon 930261 930403 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "15"; scaffold_258 StringTie exon 930790 930935 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "16"; scaffold_258 StringTie exon 942257 942533 1000 - . gene_id "MSTRG.55415"; transcript_id "MSTRG.55415.1"; exon_number "17"; scaffold_2582 StringTie exon 65203 65264 1000 - . gene_id "MSTRG.55453"; transcript_id "MSTRG.55453.1"; exon_number "1"; scaffold_2582 StringTie exon 65524 65658 1000 - . gene_id "MSTRG.55453"; transcript_id "MSTRG.55453.1"; exon_number "2"; scaffold_2582 StringTie exon 65781 65930 1000 - . gene_id "MSTRG.55453"; transcript_id "MSTRG.55453.1"; exon_number "3"; scaffold_2582 StringTie exon 66089 66177 1000 - . gene_id "MSTRG.55453"; transcript_id "MSTRG.55453.1"; exon_number "4"; scaffold_2583 StringTie exon 30306 30716 1000 . . gene_id "MSTRG.55467"; transcript_id "MSTRG.55467.1"; exon_number "1"; scaffold_25869 StringTie exon 3857 4099 1000 . . gene_id "MSTRG.55509"; transcript_id "MSTRG.55509.1"; exon_number "1"; scaffold_25884 StringTie exon 1574 1866 1000 . . gene_id "MSTRG.55531"; transcript_id "MSTRG.55531.1"; exon_number "1"; scaffold_2589 StringTie exon 59383 59743 1000 . . gene_id "MSTRG.55543"; transcript_id "MSTRG.55543.1"; exon_number "1"; scaffold_25899 StringTie exon 4676 5047 1000 . . gene_id "MSTRG.55552"; transcript_id "MSTRG.55552.1"; exon_number "1"; scaffold_259 StringTie exon 180952 181204 1000 . . gene_id "MSTRG.55578"; transcript_id "MSTRG.55578.1"; exon_number "1"; scaffold_259 StringTie exon 698353 698607 1000 . . gene_id "MSTRG.55607"; transcript_id "MSTRG.55607.1"; exon_number "1"; scaffold_259 StringTie exon 707677 707886 1000 . . gene_id "MSTRG.55608"; transcript_id "MSTRG.55608.1"; exon_number "1"; scaffold_259 StringTie exon 743046 743507 1000 . . gene_id "MSTRG.55610"; transcript_id "MSTRG.55610.1"; exon_number "1"; scaffold_259 StringTie exon 785093 785306 1000 . . gene_id "MSTRG.55613"; transcript_id "MSTRG.55613.1"; exon_number "1"; scaffold_259 StringTie exon 996010 996483 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "1"; scaffold_259 StringTie exon 996697 996817 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "2"; scaffold_259 StringTie exon 997449 997692 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "3"; scaffold_259 StringTie exon 999547 999646 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "4"; scaffold_259 StringTie exon 1006476 1006565 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "5"; scaffold_259 StringTie exon 1006990 1007045 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "6"; scaffold_259 StringTie exon 1011403 1011545 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "7"; scaffold_259 StringTie exon 1011722 1011913 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "8"; scaffold_259 StringTie exon 1018717 1018874 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "9"; scaffold_259 StringTie exon 1019054 1019177 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "10"; scaffold_259 StringTie exon 1019534 1019613 1000 + . gene_id "MSTRG.55627"; transcript_id "MSTRG.55627.1"; exon_number "11"; scaffold_2590 StringTie exon 50484 50900 1000 + . gene_id "MSTRG.55645"; transcript_id "MSTRG.55645.1"; exon_number "1"; scaffold_2590 StringTie exon 53114 53151 1000 + . gene_id "MSTRG.55645"; transcript_id "MSTRG.55645.1"; exon_number "2"; scaffold_2590 StringTie exon 66015 66371 1000 . . gene_id "MSTRG.55649"; transcript_id "MSTRG.55649.1"; exon_number "1"; scaffold_2592 StringTie exon 19242 19684 1000 . . gene_id "MSTRG.55675"; transcript_id "MSTRG.55675.1"; exon_number "1"; scaffold_25940 StringTie exon 3448 5053 1000 . . gene_id "MSTRG.55708"; transcript_id "MSTRG.55708.1"; exon_number "1"; scaffold_25942 StringTie exon 4515 5047 1000 . . gene_id "MSTRG.55711"; transcript_id "MSTRG.55711.1"; exon_number "1"; scaffold_25945 StringTie exon 3181 3486 1000 . . gene_id "MSTRG.55712"; transcript_id "MSTRG.55712.1"; exon_number "1"; scaffold_25958 StringTie exon 4635 5167 1000 . . gene_id "MSTRG.55733"; transcript_id "MSTRG.55733.1"; exon_number "1"; scaffold_2596 StringTie exon 89091 89466 1000 . . gene_id "MSTRG.55739"; transcript_id "MSTRG.55739.1"; exon_number "1"; scaffold_25963 StringTie exon 1360 1410 1000 + . gene_id "MSTRG.55742"; transcript_id "MSTRG.55742.1"; exon_number "1"; scaffold_25963 StringTie exon 1660 1742 1000 + . gene_id "MSTRG.55742"; transcript_id "MSTRG.55742.1"; exon_number "2"; scaffold_25963 StringTie exon 1938 2072 1000 + . gene_id "MSTRG.55742"; transcript_id "MSTRG.55742.1"; exon_number "3"; scaffold_25963 StringTie exon 2182 2316 1000 + . gene_id "MSTRG.55742"; transcript_id "MSTRG.55742.1"; exon_number "4"; scaffold_25963 StringTie exon 2754 2834 1000 + . gene_id "MSTRG.55742"; transcript_id "MSTRG.55742.1"; exon_number "5"; scaffold_2597 StringTie exon 36495 36726 1000 . . gene_id "MSTRG.55752"; transcript_id "MSTRG.55752.1"; exon_number "1"; scaffold_2598 StringTie exon 17457 17584 1000 - . gene_id "MSTRG.55769"; transcript_id "MSTRG.55769.1"; exon_number "1"; scaffold_2598 StringTie exon 17884 17993 1000 - . gene_id "MSTRG.55769"; transcript_id "MSTRG.55769.1"; exon_number "2"; scaffold_2599 StringTie exon 12137 12242 1000 - . gene_id "MSTRG.55780"; transcript_id "MSTRG.55780.1"; exon_number "1"; scaffold_2599 StringTie exon 14083 14388 1000 - . gene_id "MSTRG.55780"; transcript_id "MSTRG.55780.1"; exon_number "2"; scaffold_2599 StringTie exon 69965 70175 1000 . . gene_id "MSTRG.55785"; transcript_id "MSTRG.55785.1"; exon_number "1"; scaffold_26 StringTie exon 414506 414733 1000 . . gene_id "MSTRG.55816"; transcript_id "MSTRG.55816.1"; exon_number "1"; scaffold_26 StringTie exon 524927 525162 1000 . . gene_id "MSTRG.55821"; transcript_id "MSTRG.55821.1"; exon_number "1"; scaffold_26 StringTie exon 679163 679461 1000 . . gene_id "MSTRG.55833"; transcript_id "MSTRG.55833.1"; exon_number "1"; scaffold_26 StringTie exon 841846 842505 1000 - . gene_id "MSTRG.55840"; transcript_id "MSTRG.55840.1"; exon_number "1"; scaffold_26 StringTie exon 842583 842676 1000 - . gene_id "MSTRG.55840"; transcript_id "MSTRG.55840.1"; exon_number "2"; scaffold_26 StringTie exon 842884 842934 1000 - . gene_id "MSTRG.55840"; transcript_id "MSTRG.55840.1"; exon_number "3"; scaffold_26 StringTie exon 941700 941911 1000 . . gene_id "MSTRG.55847"; transcript_id "MSTRG.55847.1"; exon_number "1"; scaffold_26 StringTie exon 1554777 1555128 1000 . . gene_id "MSTRG.55885"; transcript_id "MSTRG.55885.1"; exon_number "1"; scaffold_26 StringTie exon 1779145 1779385 1000 . . gene_id "MSTRG.55906"; transcript_id "MSTRG.55906.1"; exon_number "1"; scaffold_26 StringTie exon 1838462 1838486 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "1"; scaffold_26 StringTie exon 1838572 1838661 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "2"; scaffold_26 StringTie exon 1838934 1839025 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "3"; scaffold_26 StringTie exon 1839119 1839200 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "4"; scaffold_26 StringTie exon 1839506 1839603 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "5"; scaffold_26 StringTie exon 1839971 1840037 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "6"; scaffold_26 StringTie exon 1840151 1840339 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "7"; scaffold_26 StringTie exon 1840580 1840716 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "8"; scaffold_26 StringTie exon 1840858 1840968 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "9"; scaffold_26 StringTie exon 1841260 1841352 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "10"; scaffold_26 StringTie exon 1841431 1841460 1000 - . gene_id "MSTRG.55915"; transcript_id "MSTRG.55915.1"; exon_number "11"; scaffold_26 StringTie exon 1892609 1892838 1000 . . gene_id "MSTRG.55921"; transcript_id "MSTRG.55921.1"; exon_number "1"; scaffold_26 StringTie exon 1911908 1912050 1000 + . gene_id "MSTRG.55924"; transcript_id "MSTRG.55924.1"; exon_number "1"; scaffold_26 StringTie exon 1915595 1915735 1000 + . gene_id "MSTRG.55924"; transcript_id "MSTRG.55924.1"; exon_number "2"; scaffold_26 StringTie exon 1915983 1916108 1000 + . gene_id "MSTRG.55924"; transcript_id "MSTRG.55924.1"; exon_number "3"; scaffold_26 StringTie exon 1916666 1917089 1000 + . gene_id "MSTRG.55924"; transcript_id "MSTRG.55924.1"; exon_number "4"; scaffold_26 StringTie exon 2399698 2399857 1000 + . gene_id "MSTRG.55952"; transcript_id "MSTRG.55952.1"; exon_number "1"; scaffold_26 StringTie exon 2399991 2400172 1000 + . gene_id "MSTRG.55952"; transcript_id "MSTRG.55952.1"; exon_number "2"; scaffold_26 StringTie exon 2400327 2400526 1000 + . gene_id "MSTRG.55952"; transcript_id "MSTRG.55952.1"; exon_number "3"; scaffold_26 StringTie exon 2400618 2400830 1000 + . gene_id "MSTRG.55952"; transcript_id "MSTRG.55952.1"; exon_number "4"; scaffold_26 StringTie exon 2401136 2401298 1000 + . gene_id "MSTRG.55952"; transcript_id "MSTRG.55952.1"; exon_number "5"; scaffold_26 StringTie exon 2401409 2401590 1000 + . gene_id "MSTRG.55952"; transcript_id "MSTRG.55952.1"; exon_number "6"; scaffold_260 StringTie exon 96855 97162 1000 . . gene_id "MSTRG.55970"; transcript_id "MSTRG.55970.1"; exon_number "1"; scaffold_260 StringTie exon 462902 463337 1000 . . gene_id "MSTRG.56002"; transcript_id "MSTRG.56002.1"; exon_number "1"; scaffold_260 StringTie exon 477418 477658 1000 . . gene_id "MSTRG.56004"; transcript_id "MSTRG.56004.1"; exon_number "1"; scaffold_260 StringTie exon 830304 830529 1000 . . gene_id "MSTRG.56035"; transcript_id "MSTRG.56035.1"; exon_number "1"; scaffold_26011 StringTie exon 3332 3549 1000 . . gene_id "MSTRG.56076"; transcript_id "MSTRG.56076.1"; exon_number "1"; scaffold_26032 StringTie exon 4939 5151 1000 . . gene_id "MSTRG.56102"; transcript_id "MSTRG.56102.1"; exon_number "1"; scaffold_2606 StringTie exon 17063 17151 1000 + . gene_id "MSTRG.56128"; transcript_id "MSTRG.56128.1"; exon_number "1"; scaffold_2606 StringTie exon 17559 17712 1000 + . gene_id "MSTRG.56128"; transcript_id "MSTRG.56128.1"; exon_number "2"; scaffold_2606 StringTie exon 17851 17955 1000 + . gene_id "MSTRG.56128"; transcript_id "MSTRG.56128.1"; exon_number "3"; scaffold_2606 StringTie exon 18317 18394 1000 + . gene_id "MSTRG.56128"; transcript_id "MSTRG.56128.1"; exon_number "4"; scaffold_2606 StringTie exon 33632 33651 1000 + . gene_id "MSTRG.56130"; transcript_id "MSTRG.56130.1"; exon_number "1"; scaffold_2606 StringTie exon 33743 33907 1000 + . gene_id "MSTRG.56130"; transcript_id "MSTRG.56130.1"; exon_number "2"; scaffold_2606 StringTie exon 34076 34115 1000 + . gene_id "MSTRG.56130"; transcript_id "MSTRG.56130.1"; exon_number "3"; scaffold_2609 StringTie exon 55199 55474 1000 . . gene_id "MSTRG.56181"; transcript_id "MSTRG.56181.1"; exon_number "1"; scaffold_261 StringTie exon 307059 307178 1000 + . gene_id "MSTRG.56215"; transcript_id "MSTRG.56215.1"; exon_number "1"; scaffold_261 StringTie exon 308079 308268 1000 + . gene_id "MSTRG.56215"; transcript_id "MSTRG.56215.1"; exon_number "2"; scaffold_261 StringTie exon 308516 308658 1000 + . gene_id "MSTRG.56215"; transcript_id "MSTRG.56215.1"; exon_number "3"; scaffold_261 StringTie exon 310779 310942 1000 + . gene_id "MSTRG.56215"; transcript_id "MSTRG.56215.1"; exon_number "4"; scaffold_261 StringTie exon 311393 312081 1000 + . gene_id "MSTRG.56215"; transcript_id "MSTRG.56215.1"; exon_number "5"; scaffold_261 StringTie exon 335303 335640 1000 . . gene_id "MSTRG.56218"; transcript_id "MSTRG.56218.1"; exon_number "1"; scaffold_261 StringTie exon 695879 696811 1000 - . gene_id "MSTRG.56246"; transcript_id "MSTRG.56246.1"; exon_number "1"; scaffold_261 StringTie exon 710028 710288 1000 . . gene_id "MSTRG.56248"; transcript_id "MSTRG.56248.1"; exon_number "1"; scaffold_2610 StringTie exon 28179 28497 1000 . . gene_id "MSTRG.56273"; transcript_id "MSTRG.56273.1"; exon_number "1"; scaffold_2611 StringTie exon 74769 75002 1000 . . gene_id "MSTRG.56291"; transcript_id "MSTRG.56291.1"; exon_number "1"; scaffold_2613 StringTie exon 67820 68115 1000 . . gene_id "MSTRG.56308"; transcript_id "MSTRG.56308.1"; exon_number "1"; scaffold_26148 StringTie exon 483 889 1000 . . gene_id "MSTRG.56328"; transcript_id "MSTRG.56328.1"; exon_number "1"; scaffold_2617 StringTie exon 37293 37572 1000 . . gene_id "MSTRG.56361"; transcript_id "MSTRG.56361.1"; exon_number "1"; scaffold_2618 StringTie exon 67384 67647 1000 . . gene_id "MSTRG.56372"; transcript_id "MSTRG.56372.1"; exon_number "1"; scaffold_26182 StringTie exon 1082 1420 1000 . . gene_id "MSTRG.56378"; transcript_id "MSTRG.56378.1"; exon_number "1"; scaffold_262 StringTie exon 97733 98027 1000 . . gene_id "MSTRG.56403"; transcript_id "MSTRG.56403.1"; exon_number "1"; scaffold_262 StringTie exon 441803 442155 1000 . . gene_id "MSTRG.56420"; transcript_id "MSTRG.56420.1"; exon_number "1"; scaffold_262 StringTie exon 904946 905287 1000 . . gene_id "MSTRG.56453"; transcript_id "MSTRG.56453.1"; exon_number "1"; scaffold_262 StringTie exon 1000843 1001111 1000 . . gene_id "MSTRG.56456"; transcript_id "MSTRG.56456.1"; exon_number "1"; scaffold_26205 StringTie exon 2153 5095 1000 . . gene_id "MSTRG.56466"; transcript_id "MSTRG.56466.1"; exon_number "1"; scaffold_2622 StringTie exon 74164 74469 1000 . . gene_id "MSTRG.56479"; transcript_id "MSTRG.56479.1"; exon_number "1"; scaffold_26220 StringTie exon 4033 4377 1000 . . gene_id "MSTRG.56481"; transcript_id "MSTRG.56481.1"; exon_number "1"; scaffold_26246 StringTie exon 4830 5089 1000 - . gene_id "MSTRG.56499"; transcript_id "MSTRG.56499.1"; exon_number "1"; scaffold_2626 StringTie exon 15514 15728 1000 . . gene_id "MSTRG.56515"; transcript_id "MSTRG.56515.1"; exon_number "1"; scaffold_2626 StringTie exon 19189 19282 1000 + . gene_id "MSTRG.56516"; transcript_id "MSTRG.56516.1"; exon_number "1"; scaffold_2626 StringTie exon 23401 23893 1000 + . gene_id "MSTRG.56516"; transcript_id "MSTRG.56516.1"; exon_number "2"; scaffold_2626 StringTie exon 54255 54466 1000 . . gene_id "MSTRG.56520"; transcript_id "MSTRG.56520.1"; exon_number "1"; scaffold_2626 StringTie exon 55616 55669 1000 - . gene_id "MSTRG.56521"; transcript_id "MSTRG.56521.1"; exon_number "1"; scaffold_2626 StringTie exon 55999 56115 1000 - . gene_id "MSTRG.56521"; transcript_id "MSTRG.56521.1"; exon_number "2"; scaffold_2626 StringTie exon 57472 57632 1000 - . gene_id "MSTRG.56521"; transcript_id "MSTRG.56521.1"; exon_number "3"; scaffold_2626 StringTie exon 57893 57979 1000 - . gene_id "MSTRG.56521"; transcript_id "MSTRG.56521.1"; exon_number "4"; scaffold_2627 StringTie exon 63489 63786 1000 . . gene_id "MSTRG.56533"; transcript_id "MSTRG.56533.1"; exon_number "1"; scaffold_2628 StringTie exon 13565 13921 1000 . . gene_id "MSTRG.56542"; transcript_id "MSTRG.56542.1"; exon_number "1"; scaffold_2629 StringTie exon 59412 59627 1000 . . gene_id "MSTRG.56552"; transcript_id "MSTRG.56552.1"; exon_number "1"; scaffold_26295 StringTie exon 2651 2927 1000 . . gene_id "MSTRG.56555"; transcript_id "MSTRG.56555.1"; exon_number "1"; scaffold_263 StringTie exon 28461 28764 1000 . . gene_id "MSTRG.56560"; transcript_id "MSTRG.56560.1"; exon_number "1"; scaffold_263 StringTie exon 325100 325490 1000 . . gene_id "MSTRG.56567"; transcript_id "MSTRG.56567.1"; exon_number "1"; scaffold_263 StringTie exon 333248 333477 1000 . . gene_id "MSTRG.56568"; transcript_id "MSTRG.56568.1"; exon_number "1"; scaffold_263 StringTie exon 446193 446574 1000 . . gene_id "MSTRG.56574"; transcript_id "MSTRG.56574.1"; exon_number "1"; scaffold_263 StringTie exon 541382 541628 1000 . . gene_id "MSTRG.56580"; transcript_id "MSTRG.56580.1"; exon_number "1"; scaffold_263 StringTie exon 856721 857803 1000 . . gene_id "MSTRG.56604"; transcript_id "MSTRG.56604.1"; exon_number "1"; scaffold_263 StringTie exon 1043285 1043554 1000 . . gene_id "MSTRG.56624"; transcript_id "MSTRG.56624.1"; exon_number "1"; scaffold_26331 StringTie exon 1796 2051 1000 . . gene_id "MSTRG.56668"; transcript_id "MSTRG.56668.1"; exon_number "1"; scaffold_2634 StringTie exon 31662 31979 1000 . . gene_id "MSTRG.56679"; transcript_id "MSTRG.56679.1"; exon_number "1"; scaffold_26341 StringTie exon 3333 3571 1000 . . gene_id "MSTRG.56685"; transcript_id "MSTRG.56685.1"; exon_number "1"; scaffold_2635 StringTie exon 56931 57141 1000 . . gene_id "MSTRG.56692"; transcript_id "MSTRG.56692.1"; exon_number "1"; scaffold_2638 StringTie exon 40436 40525 1000 - . gene_id "MSTRG.56732"; transcript_id "MSTRG.56732.1"; exon_number "1"; scaffold_2638 StringTie exon 41299 41609 1000 - . gene_id "MSTRG.56732"; transcript_id "MSTRG.56732.1"; exon_number "2"; scaffold_2639 StringTie exon 28092 28337 1000 . . gene_id "MSTRG.56742"; transcript_id "MSTRG.56742.1"; exon_number "1"; scaffold_264 StringTie exon 59438 59648 1000 . . gene_id "MSTRG.56751"; transcript_id "MSTRG.56751.1"; exon_number "1"; scaffold_264 StringTie exon 636853 637268 1000 . . gene_id "MSTRG.56782"; transcript_id "MSTRG.56782.1"; exon_number "1"; scaffold_264 StringTie exon 866100 866312 1000 . . gene_id "MSTRG.56792"; transcript_id "MSTRG.56792.1"; exon_number "1"; scaffold_264 StringTie exon 894189 894418 1000 . . gene_id "MSTRG.56793"; transcript_id "MSTRG.56793.1"; exon_number "1"; scaffold_264 StringTie exon 945235 945525 1000 . . gene_id "MSTRG.56794"; transcript_id "MSTRG.56794.1"; exon_number "1"; scaffold_264 StringTie exon 1014928 1015195 1000 . . gene_id "MSTRG.56796"; transcript_id "MSTRG.56796.1"; exon_number "1"; scaffold_2641 StringTie exon 85 433 1000 . . gene_id "MSTRG.56808"; transcript_id "MSTRG.56808.1"; exon_number "1"; scaffold_26410 StringTie exon 656 990 1000 . . gene_id "MSTRG.56811"; transcript_id "MSTRG.56811.1"; exon_number "1"; scaffold_2642 StringTie exon 55092 56103 1000 . . gene_id "MSTRG.56819"; transcript_id "MSTRG.56819.1"; exon_number "1"; scaffold_2646 StringTie exon 34200 34416 1000 . . gene_id "MSTRG.56849"; transcript_id "MSTRG.56849.1"; exon_number "1"; scaffold_2648 StringTie exon 27268 27639 1000 + . gene_id "MSTRG.56866"; transcript_id "MSTRG.56866.1"; exon_number "1"; scaffold_2648 StringTie exon 51233 51250 1000 + . gene_id "MSTRG.56866"; transcript_id "MSTRG.56866.1"; exon_number "2"; scaffold_2648 StringTie exon 53182 53266 1000 + . gene_id "MSTRG.56866"; transcript_id "MSTRG.56866.1"; exon_number "3"; scaffold_26490 StringTie exon 1519 1682 1000 - . gene_id "MSTRG.56880"; transcript_id "MSTRG.56880.1"; exon_number "1"; scaffold_26490 StringTie exon 1875 1937 1000 - . gene_id "MSTRG.56880"; transcript_id "MSTRG.56880.1"; exon_number "2"; scaffold_26490 StringTie exon 2121 2358 1000 - . gene_id "MSTRG.56880"; transcript_id "MSTRG.56880.1"; exon_number "3"; scaffold_26497 StringTie exon 3196 3509 1000 . . gene_id "MSTRG.56889"; transcript_id "MSTRG.56889.1"; exon_number "1"; scaffold_265 StringTie exon 79992 80227 1000 . . gene_id "MSTRG.56898"; transcript_id "MSTRG.56898.1"; exon_number "1"; scaffold_265 StringTie exon 301790 302277 1000 . . gene_id "MSTRG.56912"; transcript_id "MSTRG.56912.1"; exon_number "1"; scaffold_265 StringTie exon 304760 304870 1000 + . gene_id "MSTRG.56914"; transcript_id "MSTRG.56914.1"; exon_number "1"; scaffold_265 StringTie exon 306722 307026 1000 + . gene_id "MSTRG.56914"; transcript_id "MSTRG.56914.1"; exon_number "2"; scaffold_265 StringTie exon 308398 309278 1000 . . gene_id "MSTRG.56915"; transcript_id "MSTRG.56915.1"; exon_number "1"; scaffold_265 StringTie exon 500852 501184 1000 . . gene_id "MSTRG.56939"; transcript_id "MSTRG.56939.1"; exon_number "1"; scaffold_265 StringTie exon 879161 879443 1000 . . gene_id "MSTRG.56964"; transcript_id "MSTRG.56964.1"; exon_number "1"; scaffold_265 StringTie exon 927730 927956 1000 . . gene_id "MSTRG.56968"; transcript_id "MSTRG.56968.1"; exon_number "1"; scaffold_265 StringTie exon 1043075 1043298 1000 . . gene_id "MSTRG.56983"; transcript_id "MSTRG.56983.1"; exon_number "1"; scaffold_26508 StringTie exon 487 748 1000 . . gene_id "MSTRG.57002"; transcript_id "MSTRG.57002.1"; exon_number "1"; scaffold_2652 StringTie exon 7904 8241 1000 . . gene_id "MSTRG.57009"; transcript_id "MSTRG.57009.1"; exon_number "1"; scaffold_2656 StringTie exon 34683 34744 1000 + . gene_id "MSTRG.57063"; transcript_id "MSTRG.57063.1"; exon_number "1"; scaffold_2656 StringTie exon 35076 35304 1000 + . gene_id "MSTRG.57063"; transcript_id "MSTRG.57063.1"; exon_number "2"; scaffold_26565 StringTie exon 168 250 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "1"; scaffold_26565 StringTie exon 402 512 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "2"; scaffold_26565 StringTie exon 643 741 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "3"; scaffold_26565 StringTie exon 842 949 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "4"; scaffold_26565 StringTie exon 1315 1398 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "5"; scaffold_26565 StringTie exon 1676 1835 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "6"; scaffold_26565 StringTie exon 2560 2753 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "7"; scaffold_26565 StringTie exon 2941 3079 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "8"; scaffold_26565 StringTie exon 4177 4355 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "9"; scaffold_26565 StringTie exon 4538 4701 1000 - . gene_id "MSTRG.57072"; transcript_id "MSTRG.57072.1"; exon_number "10"; scaffold_26586 StringTie exon 4340 4986 1000 . . gene_id "MSTRG.57098"; transcript_id "MSTRG.57098.1"; exon_number "1"; scaffold_266 StringTie exon 237097 237354 1000 . . gene_id "MSTRG.57128"; transcript_id "MSTRG.57128.1"; exon_number "1"; scaffold_266 StringTie exon 266590 266654 1000 - . gene_id "MSTRG.57133"; transcript_id "MSTRG.57133.1"; exon_number "1"; scaffold_266 StringTie exon 266809 266944 1000 - . gene_id "MSTRG.57133"; transcript_id "MSTRG.57133.1"; exon_number "2"; scaffold_266 StringTie exon 267092 267294 1000 - . gene_id "MSTRG.57133"; transcript_id "MSTRG.57133.1"; exon_number "3"; scaffold_266 StringTie exon 267464 267476 1000 - . gene_id "MSTRG.57133"; transcript_id "MSTRG.57133.1"; exon_number "4"; scaffold_266 StringTie exon 657337 657354 1000 + . gene_id "MSTRG.57160"; transcript_id "MSTRG.57160.1"; exon_number "1"; scaffold_266 StringTie exon 657507 657614 1000 + . gene_id "MSTRG.57160"; transcript_id "MSTRG.57160.1"; exon_number "2"; scaffold_266 StringTie exon 657766 657902 1000 + . gene_id "MSTRG.57160"; transcript_id "MSTRG.57160.1"; exon_number "3"; scaffold_266 StringTie exon 657987 658097 1000 + . gene_id "MSTRG.57160"; transcript_id "MSTRG.57160.1"; exon_number "4"; scaffold_266 StringTie exon 658239 658267 1000 + . gene_id "MSTRG.57160"; transcript_id "MSTRG.57160.1"; exon_number "5"; scaffold_266 StringTie exon 659351 659388 1000 + . gene_id "MSTRG.57161"; transcript_id "MSTRG.57161.1"; exon_number "1"; scaffold_266 StringTie exon 659500 659600 1000 + . gene_id "MSTRG.57161"; transcript_id "MSTRG.57161.1"; exon_number "2"; scaffold_266 StringTie exon 659715 659820 1000 + . gene_id "MSTRG.57161"; transcript_id "MSTRG.57161.1"; exon_number "3"; scaffold_266 StringTie exon 661732 661855 1000 + . gene_id "MSTRG.57161"; transcript_id "MSTRG.57161.1"; exon_number "4"; scaffold_266 StringTie exon 661962 662023 1000 + . gene_id "MSTRG.57161"; transcript_id "MSTRG.57161.1"; exon_number "5"; scaffold_266 StringTie exon 662110 662165 1000 + . gene_id "MSTRG.57161"; transcript_id "MSTRG.57161.1"; exon_number "6"; scaffold_266 StringTie exon 662703 663791 1000 . . gene_id "MSTRG.57162"; transcript_id "MSTRG.57162.1"; exon_number "1"; scaffold_266 StringTie exon 784618 784630 1000 + . gene_id "MSTRG.57175"; transcript_id "MSTRG.57175.1"; exon_number "1"; scaffold_266 StringTie exon 785712 785876 1000 + . gene_id "MSTRG.57175"; transcript_id "MSTRG.57175.1"; exon_number "2"; scaffold_266 StringTie exon 786968 787169 1000 + . gene_id "MSTRG.57175"; transcript_id "MSTRG.57175.1"; exon_number "3"; scaffold_266 StringTie exon 979401 979673 1000 . . gene_id "MSTRG.57192"; transcript_id "MSTRG.57192.1"; exon_number "1"; scaffold_26605 StringTie exon 3832 4108 1000 . . gene_id "MSTRG.57210"; transcript_id "MSTRG.57210.1"; exon_number "1"; scaffold_2662 StringTie exon 65716 66107 1000 . . gene_id "MSTRG.57224"; transcript_id "MSTRG.57224.1"; exon_number "1"; scaffold_2664 StringTie exon 17198 17419 1000 . . gene_id "MSTRG.57241"; transcript_id "MSTRG.57241.1"; exon_number "1"; scaffold_2664 StringTie exon 82215 82438 1000 . . gene_id "MSTRG.57243"; transcript_id "MSTRG.57243.1"; exon_number "1"; scaffold_2665 StringTie exon 3687 3899 1000 . . gene_id "MSTRG.57247"; transcript_id "MSTRG.57247.1"; exon_number "1"; scaffold_26659 StringTie exon 4146 4537 1000 . . gene_id "MSTRG.57258"; transcript_id "MSTRG.57258.1"; exon_number "1"; scaffold_2666 StringTie exon 1396 1597 1000 . . gene_id "MSTRG.57259"; transcript_id "MSTRG.57259.1"; exon_number "1"; scaffold_2666 StringTie exon 9613 10113 1000 . . gene_id "MSTRG.57260"; transcript_id "MSTRG.57260.1"; exon_number "1"; scaffold_2666 StringTie exon 66669 66987 1000 . . gene_id "MSTRG.57270"; transcript_id "MSTRG.57270.1"; exon_number "1"; scaffold_26662 StringTie exon 2267 2298 1000 - . gene_id "MSTRG.57275"; transcript_id "MSTRG.57275.1"; exon_number "1"; scaffold_26662 StringTie exon 2431 2589 1000 - . gene_id "MSTRG.57275"; transcript_id "MSTRG.57275.1"; exon_number "2"; scaffold_26662 StringTie exon 2749 2826 1000 - . gene_id "MSTRG.57275"; transcript_id "MSTRG.57275.1"; exon_number "3"; scaffold_2667 StringTie exon 57858 58135 1000 . . gene_id "MSTRG.57282"; transcript_id "MSTRG.57282.1"; exon_number "1"; scaffold_2667 StringTie exon 84280 84498 1000 . . gene_id "MSTRG.57284"; transcript_id "MSTRG.57284.1"; exon_number "1"; scaffold_267 StringTie exon 102184 102387 1000 . . gene_id "MSTRG.57312"; transcript_id "MSTRG.57312.1"; exon_number "1"; scaffold_267 StringTie exon 356285 356666 1000 . . gene_id "MSTRG.57327"; transcript_id "MSTRG.57327.1"; exon_number "1"; scaffold_267 StringTie exon 418736 419067 1000 . . gene_id "MSTRG.57330"; transcript_id "MSTRG.57330.1"; exon_number "1"; scaffold_267 StringTie exon 548734 548962 1000 . . gene_id "MSTRG.57336"; transcript_id "MSTRG.57336.1"; exon_number "1"; scaffold_267 StringTie exon 664137 664388 1000 . . gene_id "MSTRG.57339"; transcript_id "MSTRG.57339.1"; exon_number "1"; scaffold_267 StringTie exon 784589 785049 1000 . . gene_id "MSTRG.57343"; transcript_id "MSTRG.57343.1"; exon_number "1"; scaffold_267 StringTie exon 1062774 1062924 1000 + . gene_id "MSTRG.57350"; transcript_id "MSTRG.57350.1"; exon_number "1"; scaffold_267 StringTie exon 1063162 1063459 1000 + . gene_id "MSTRG.57350"; transcript_id "MSTRG.57350.1"; exon_number "2"; scaffold_267 StringTie exon 1063561 1063609 1000 + . gene_id "MSTRG.57350"; transcript_id "MSTRG.57350.1"; exon_number "3"; scaffold_267 StringTie exon 1066342 1066525 1000 + . gene_id "MSTRG.57352"; transcript_id "MSTRG.57352.1"; exon_number "1"; scaffold_267 StringTie exon 1066687 1066856 1000 + . gene_id "MSTRG.57352"; transcript_id "MSTRG.57352.1"; exon_number "2"; scaffold_267 StringTie exon 1075254 1075361 1000 + . gene_id "MSTRG.57352"; transcript_id "MSTRG.57352.1"; exon_number "3"; scaffold_2670 StringTie exon 69840 69857 1000 - . gene_id "MSTRG.57359"; transcript_id "MSTRG.57359.1"; exon_number "1"; scaffold_2670 StringTie exon 69994 70056 1000 - . gene_id "MSTRG.57359"; transcript_id "MSTRG.57359.1"; exon_number "2"; scaffold_2670 StringTie exon 70275 70390 1000 - . gene_id "MSTRG.57359"; transcript_id "MSTRG.57359.1"; exon_number "3"; scaffold_2670 StringTie exon 71006 71353 1000 - . gene_id "MSTRG.57359"; transcript_id "MSTRG.57359.1"; exon_number "4"; scaffold_2670 StringTie exon 73413 73608 1000 - . gene_id "MSTRG.57359"; transcript_id "MSTRG.57359.1"; exon_number "5"; scaffold_26767 StringTie exon 4704 4939 1000 . . gene_id "MSTRG.57425"; transcript_id "MSTRG.57425.1"; exon_number "1"; scaffold_2677 StringTie exon 9282 9834 1000 . . gene_id "MSTRG.57429"; transcript_id "MSTRG.57429.1"; exon_number "1"; scaffold_26792 StringTie exon 24 2873 1000 . . gene_id "MSTRG.57459"; transcript_id "MSTRG.57459.1"; exon_number "1"; scaffold_268 StringTie exon 18310 18537 1000 . . gene_id "MSTRG.57465"; transcript_id "MSTRG.57465.1"; exon_number "1"; scaffold_268 StringTie exon 248037 248284 1000 . . gene_id "MSTRG.57484"; transcript_id "MSTRG.57484.1"; exon_number "1"; scaffold_268 StringTie exon 504440 504642 1000 . . gene_id "MSTRG.57510"; transcript_id "MSTRG.57510.1"; exon_number "1"; scaffold_268 StringTie exon 649795 650031 1000 . . gene_id "MSTRG.57517"; transcript_id "MSTRG.57517.1"; exon_number "1"; scaffold_268 StringTie exon 889212 889426 1000 + . gene_id "MSTRG.57537"; transcript_id "MSTRG.57537.1"; exon_number "1"; scaffold_268 StringTie exon 906359 906588 1000 + . gene_id "MSTRG.57537"; transcript_id "MSTRG.57537.1"; exon_number "2"; scaffold_268 StringTie exon 913334 913492 1000 + . gene_id "MSTRG.57537"; transcript_id "MSTRG.57537.1"; exon_number "3"; scaffold_268 StringTie exon 922641 922686 1000 - . gene_id "MSTRG.57546"; transcript_id "MSTRG.57546.1"; exon_number "1"; scaffold_268 StringTie exon 922769 922854 1000 - . gene_id "MSTRG.57546"; transcript_id "MSTRG.57546.1"; exon_number "2"; scaffold_268 StringTie exon 923793 923877 1000 - . gene_id "MSTRG.57546"; transcript_id "MSTRG.57546.1"; exon_number "3"; scaffold_268 StringTie exon 1010621 1010705 1000 - . gene_id "MSTRG.57560"; transcript_id "MSTRG.57560.2"; exon_number "1"; scaffold_268 StringTie exon 1015252 1015382 1000 - . gene_id "MSTRG.57560"; transcript_id "MSTRG.57560.2"; exon_number "2"; scaffold_26813 StringTie exon 703 1052 1000 . . gene_id "MSTRG.57587"; transcript_id "MSTRG.57587.1"; exon_number "1"; scaffold_2682 StringTie exon 1989 2232 1000 . . gene_id "MSTRG.57592"; transcript_id "MSTRG.57592.1"; exon_number "1"; scaffold_2682 StringTie exon 61541 61778 1000 . . gene_id "MSTRG.57601"; transcript_id "MSTRG.57601.1"; exon_number "1"; scaffold_26821 StringTie exon 1976 2229 1000 . . gene_id "MSTRG.57605"; transcript_id "MSTRG.57605.1"; exon_number "1"; scaffold_26828 StringTie exon 1475 2131 1000 . . gene_id "MSTRG.57606"; transcript_id "MSTRG.57606.1"; exon_number "1"; scaffold_2685 StringTie exon 78344 78555 1000 . . gene_id "MSTRG.57641"; transcript_id "MSTRG.57641.1"; exon_number "1"; scaffold_26856 StringTie exon 860 1049 1000 + . gene_id "MSTRG.57646"; transcript_id "MSTRG.57646.1"; exon_number "1"; scaffold_26856 StringTie exon 1199 1281 1000 + . gene_id "MSTRG.57646"; transcript_id "MSTRG.57646.1"; exon_number "2"; scaffold_26856 StringTie exon 1390 1544 1000 + . gene_id "MSTRG.57646"; transcript_id "MSTRG.57646.1"; exon_number "3"; scaffold_26856 StringTie exon 3112 3323 1000 + . gene_id "MSTRG.57646"; transcript_id "MSTRG.57646.1"; exon_number "4"; scaffold_26856 StringTie exon 3649 4137 1000 + . gene_id "MSTRG.57646"; transcript_id "MSTRG.57646.1"; exon_number "5"; scaffold_2687 StringTie exon 6109 6605 1000 . . gene_id "MSTRG.57657"; transcript_id "MSTRG.57657.1"; exon_number "1"; scaffold_26876 StringTie exon 1965 2319 1000 . . gene_id "MSTRG.57662"; transcript_id "MSTRG.57662.1"; exon_number "1"; scaffold_26877 StringTie exon 2562 2762 1000 . . gene_id "MSTRG.57663"; transcript_id "MSTRG.57663.1"; exon_number "1"; scaffold_26889 StringTie exon 845 2234 1000 . . gene_id "MSTRG.57671"; transcript_id "MSTRG.57671.1"; exon_number "1"; scaffold_269 StringTie exon 75774 76406 1000 - . gene_id "MSTRG.57686"; transcript_id "MSTRG.57686.2"; exon_number "1"; scaffold_269 StringTie exon 78773 78876 1000 - . gene_id "MSTRG.57686"; transcript_id "MSTRG.57686.2"; exon_number "2"; scaffold_269 StringTie exon 79124 79237 1000 - . gene_id "MSTRG.57686"; transcript_id "MSTRG.57686.2"; exon_number "3"; scaffold_269 StringTie exon 141549 141764 1000 . . gene_id "MSTRG.57688"; transcript_id "MSTRG.57688.1"; exon_number "1"; scaffold_269 StringTie exon 273672 273791 1000 + . gene_id "MSTRG.57695"; transcript_id "MSTRG.57695.1"; exon_number "1"; scaffold_269 StringTie exon 274026 274141 1000 + . gene_id "MSTRG.57695"; transcript_id "MSTRG.57695.1"; exon_number "2"; scaffold_269 StringTie exon 277906 277980 1000 + . gene_id "MSTRG.57695"; transcript_id "MSTRG.57695.1"; exon_number "3"; scaffold_269 StringTie exon 278323 278407 1000 + . gene_id "MSTRG.57695"; transcript_id "MSTRG.57695.1"; exon_number "4"; scaffold_269 StringTie exon 279453 279595 1000 + . gene_id "MSTRG.57695"; transcript_id "MSTRG.57695.1"; exon_number "5"; scaffold_269 StringTie exon 282813 283070 1000 + . gene_id "MSTRG.57695"; transcript_id "MSTRG.57695.1"; exon_number "6"; scaffold_269 StringTie exon 338216 338447 1000 . . gene_id "MSTRG.57702"; transcript_id "MSTRG.57702.1"; exon_number "1"; scaffold_269 StringTie exon 390175 390197 1000 + . gene_id "MSTRG.57704"; transcript_id "MSTRG.57704.1"; exon_number "1"; scaffold_269 StringTie exon 390428 390553 1000 + . gene_id "MSTRG.57704"; transcript_id "MSTRG.57704.1"; exon_number "2"; scaffold_269 StringTie exon 390657 390761 1000 + . gene_id "MSTRG.57704"; transcript_id "MSTRG.57704.1"; exon_number "3"; scaffold_269 StringTie exon 390936 391000 1000 + . gene_id "MSTRG.57704"; transcript_id "MSTRG.57704.1"; exon_number "4"; scaffold_269 StringTie exon 391144 391203 1000 + . gene_id "MSTRG.57704"; transcript_id "MSTRG.57704.1"; exon_number "5"; scaffold_269 StringTie exon 524312 524633 1000 . . gene_id "MSTRG.57710"; transcript_id "MSTRG.57710.1"; exon_number "1"; scaffold_269 StringTie exon 774680 774859 1000 - . gene_id "MSTRG.57732"; transcript_id "MSTRG.57732.1"; exon_number "1"; scaffold_269 StringTie exon 775060 775093 1000 - . gene_id "MSTRG.57732"; transcript_id "MSTRG.57732.1"; exon_number "2"; scaffold_269 StringTie exon 793492 793913 1000 + . gene_id "MSTRG.57735"; transcript_id "MSTRG.57735.1"; exon_number "1"; scaffold_269 StringTie exon 797225 797365 1000 + . gene_id "MSTRG.57735"; transcript_id "MSTRG.57735.1"; exon_number "2"; scaffold_269 StringTie exon 798590 800424 1000 + . gene_id "MSTRG.57735"; transcript_id "MSTRG.57735.1"; exon_number "3"; scaffold_26903 StringTie exon 1744 2233 1000 . . gene_id "MSTRG.57772"; transcript_id "MSTRG.57772.1"; exon_number "1"; scaffold_26937 StringTie exon 3513 3763 1000 . . gene_id "MSTRG.57809"; transcript_id "MSTRG.57809.1"; exon_number "1"; scaffold_2694 StringTie exon 35111 35919 1000 . . gene_id "MSTRG.57815"; transcript_id "MSTRG.57815.1"; exon_number "1"; scaffold_2694 StringTie exon 82887 83224 1000 . . gene_id "MSTRG.57821"; transcript_id "MSTRG.57821.1"; exon_number "1"; scaffold_26948 StringTie exon 581 896 1000 . . gene_id "MSTRG.57829"; transcript_id "MSTRG.57829.1"; exon_number "1"; scaffold_2695 StringTie exon 24235 24557 1000 + . gene_id "MSTRG.57832"; transcript_id "MSTRG.57832.1"; exon_number "1"; scaffold_2698 StringTie exon 33660 34006 1000 . . gene_id "MSTRG.57875"; transcript_id "MSTRG.57875.1"; exon_number "1"; scaffold_2698 StringTie exon 71223 71516 1000 . . gene_id "MSTRG.57878"; transcript_id "MSTRG.57878.1"; exon_number "1"; scaffold_2699 StringTie exon 85039 85404 1000 . . gene_id "MSTRG.57882"; transcript_id "MSTRG.57882.1"; exon_number "1"; scaffold_27 StringTie exon 189321 189450 1000 - . gene_id "MSTRG.57902"; transcript_id "MSTRG.57902.1"; exon_number "1"; scaffold_27 StringTie exon 192822 192960 1000 - . gene_id "MSTRG.57902"; transcript_id "MSTRG.57902.1"; exon_number "2"; scaffold_27 StringTie exon 193478 193576 1000 - . gene_id "MSTRG.57902"; transcript_id "MSTRG.57902.1"; exon_number "3"; scaffold_27 StringTie exon 193734 193835 1000 - . gene_id "MSTRG.57902"; transcript_id "MSTRG.57902.1"; exon_number "4"; scaffold_27 StringTie exon 194063 194226 1000 - . gene_id "MSTRG.57902"; transcript_id "MSTRG.57902.1"; exon_number "5"; scaffold_27 StringTie exon 194628 194757 1000 - . gene_id "MSTRG.57902"; transcript_id "MSTRG.57902.1"; exon_number "6"; scaffold_27 StringTie exon 194980 195062 1000 - . gene_id "MSTRG.57902"; transcript_id "MSTRG.57902.1"; exon_number "7"; scaffold_27 StringTie exon 195185 195251 1000 - . gene_id "MSTRG.57903"; transcript_id "MSTRG.57903.1"; exon_number "1"; scaffold_27 StringTie exon 196825 197005 1000 - . gene_id "MSTRG.57903"; transcript_id "MSTRG.57903.1"; exon_number "2"; scaffold_27 StringTie exon 203321 203423 1000 - . gene_id "MSTRG.57906"; transcript_id "MSTRG.57906.1"; exon_number "1"; scaffold_27 StringTie exon 203697 203846 1000 - . gene_id "MSTRG.57906"; transcript_id "MSTRG.57906.1"; exon_number "2"; scaffold_27 StringTie exon 206262 206316 1000 - . gene_id "MSTRG.57906"; transcript_id "MSTRG.57906.1"; exon_number "3"; scaffold_27 StringTie exon 842439 842721 1000 . . gene_id "MSTRG.57952"; transcript_id "MSTRG.57952.1"; exon_number "1"; scaffold_27 StringTie exon 1062410 1062685 1000 . . gene_id "MSTRG.57962"; transcript_id "MSTRG.57962.1"; exon_number "1"; scaffold_27 StringTie exon 1274779 1274824 1000 + . gene_id "MSTRG.57981"; transcript_id "MSTRG.57981.1"; exon_number "1"; scaffold_27 StringTie exon 1275316 1275444 1000 + . gene_id "MSTRG.57981"; transcript_id "MSTRG.57981.1"; exon_number "2"; scaffold_27 StringTie exon 1277285 1277420 1000 + . gene_id "MSTRG.57981"; transcript_id "MSTRG.57981.1"; exon_number "3"; scaffold_27 StringTie exon 1279800 1279898 1000 + . gene_id "MSTRG.57981"; transcript_id "MSTRG.57981.1"; exon_number "4"; scaffold_27 StringTie exon 1280123 1280294 1000 + . gene_id "MSTRG.57981"; transcript_id "MSTRG.57981.1"; exon_number "5"; scaffold_27 StringTie exon 1284983 1285068 1000 + . gene_id "MSTRG.57981"; transcript_id "MSTRG.57981.1"; exon_number "6"; scaffold_27 StringTie exon 1286211 1286362 1000 + . gene_id "MSTRG.57981"; transcript_id "MSTRG.57981.1"; exon_number "7"; scaffold_27 StringTie exon 1286498 1286644 1000 + . gene_id "MSTRG.57981"; transcript_id "MSTRG.57981.1"; exon_number "8"; scaffold_27 StringTie exon 1491605 1491809 1000 + . gene_id "MSTRG.58012"; transcript_id "MSTRG.58012.1"; exon_number "1"; scaffold_27 StringTie exon 1496811 1496864 1000 + . gene_id "MSTRG.58012"; transcript_id "MSTRG.58012.1"; exon_number "2"; scaffold_27 StringTie exon 1496963 1497038 1000 + . gene_id "MSTRG.58012"; transcript_id "MSTRG.58012.1"; exon_number "3"; scaffold_27 StringTie exon 1497129 1497293 1000 + . gene_id "MSTRG.58012"; transcript_id "MSTRG.58012.1"; exon_number "4"; scaffold_27 StringTie exon 1549768 1550203 1000 . . gene_id "MSTRG.58017"; transcript_id "MSTRG.58017.1"; exon_number "1"; scaffold_27 StringTie exon 1577614 1578001 1000 . . gene_id "MSTRG.58021"; transcript_id "MSTRG.58021.1"; exon_number "1"; scaffold_27 StringTie exon 1745542 1745755 1000 . . gene_id "MSTRG.58035"; transcript_id "MSTRG.58035.1"; exon_number "1"; scaffold_27 StringTie exon 1755002 1755329 1000 . . gene_id "MSTRG.58036"; transcript_id "MSTRG.58036.1"; exon_number "1"; scaffold_27 StringTie exon 1976131 1976297 1000 - . gene_id "MSTRG.58069"; transcript_id "MSTRG.58069.1"; exon_number "1"; scaffold_27 StringTie exon 1976682 1976893 1000 - . gene_id "MSTRG.58069"; transcript_id "MSTRG.58069.1"; exon_number "2"; scaffold_27 StringTie exon 1977188 1977407 1000 - . gene_id "MSTRG.58069"; transcript_id "MSTRG.58069.1"; exon_number "3"; scaffold_27 StringTie exon 1977589 1977821 1000 - . gene_id "MSTRG.58069"; transcript_id "MSTRG.58069.1"; exon_number "4"; scaffold_27 StringTie exon 1978145 1978338 1000 - . gene_id "MSTRG.58069"; transcript_id "MSTRG.58069.1"; exon_number "5"; scaffold_27 StringTie exon 1978627 1978740 1000 - . gene_id "MSTRG.58069"; transcript_id "MSTRG.58069.1"; exon_number "6"; scaffold_27 StringTie exon 1979740 1979782 1000 - . gene_id "MSTRG.58070"; transcript_id "MSTRG.58070.1"; exon_number "1"; scaffold_27 StringTie exon 1979977 1980135 1000 - . gene_id "MSTRG.58070"; transcript_id "MSTRG.58070.1"; exon_number "2"; scaffold_27 StringTie exon 1981148 1981389 1000 - . gene_id "MSTRG.58070"; transcript_id "MSTRG.58070.1"; exon_number "3"; scaffold_27 StringTie exon 1981664 1981674 1000 - . gene_id "MSTRG.58070"; transcript_id "MSTRG.58070.1"; exon_number "4"; scaffold_27 StringTie exon 2086135 2086424 1000 . . gene_id "MSTRG.58076"; transcript_id "MSTRG.58076.1"; exon_number "1"; scaffold_27 StringTie exon 2179229 2179572 1000 . . gene_id "MSTRG.58081"; transcript_id "MSTRG.58081.1"; exon_number "1"; scaffold_270 StringTie exon 303391 303684 1000 - . gene_id "MSTRG.58125"; transcript_id "MSTRG.58125.2"; exon_number "1"; scaffold_270 StringTie exon 304048 304063 1000 - . gene_id "MSTRG.58125"; transcript_id "MSTRG.58125.2"; exon_number "2"; scaffold_270 StringTie exon 858729 859134 1000 . . gene_id "MSTRG.58154"; transcript_id "MSTRG.58154.1"; exon_number "1"; scaffold_2703 StringTie exon 67500 67593 1000 - . gene_id "MSTRG.58212"; transcript_id "MSTRG.58212.1"; exon_number "1"; scaffold_2703 StringTie exon 67828 67947 1000 - . gene_id "MSTRG.58212"; transcript_id "MSTRG.58212.1"; exon_number "2"; scaffold_2703 StringTie exon 68759 68838 1000 - . gene_id "MSTRG.58212"; transcript_id "MSTRG.58212.1"; exon_number "3"; scaffold_2706 StringTie exon 75039 75284 1000 . . gene_id "MSTRG.58248"; transcript_id "MSTRG.58248.1"; exon_number "1"; scaffold_27060 StringTie exon 3447 4093 1000 . . gene_id "MSTRG.58249"; transcript_id "MSTRG.58249.1"; exon_number "1"; scaffold_271 StringTie exon 190567 190893 1000 . . gene_id "MSTRG.58308"; transcript_id "MSTRG.58308.1"; exon_number "1"; scaffold_271 StringTie exon 282952 283244 1000 . . gene_id "MSTRG.58312"; transcript_id "MSTRG.58312.1"; exon_number "1"; scaffold_271 StringTie exon 407111 407120 1000 - . gene_id "MSTRG.58321"; transcript_id "MSTRG.58321.1"; exon_number "1"; scaffold_271 StringTie exon 407330 407391 1000 - . gene_id "MSTRG.58321"; transcript_id "MSTRG.58321.1"; exon_number "2"; scaffold_271 StringTie exon 407693 407855 1000 - . gene_id "MSTRG.58321"; transcript_id "MSTRG.58321.1"; exon_number "3"; scaffold_271 StringTie exon 446837 447235 1000 . . gene_id "MSTRG.58327"; transcript_id "MSTRG.58327.1"; exon_number "1"; scaffold_271 StringTie exon 497599 497812 1000 . . gene_id "MSTRG.58333"; transcript_id "MSTRG.58333.1"; exon_number "1"; scaffold_271 StringTie exon 547160 547460 1000 . . gene_id "MSTRG.58341"; transcript_id "MSTRG.58341.1"; exon_number "1"; scaffold_271 StringTie exon 566803 567028 1000 . . gene_id "MSTRG.58343"; transcript_id "MSTRG.58343.1"; exon_number "1"; scaffold_271 StringTie exon 1087508 1087764 1000 . . gene_id "MSTRG.58370"; transcript_id "MSTRG.58370.1"; exon_number "1"; scaffold_27114 StringTie exon 3805 4171 1000 + . gene_id "MSTRG.58389"; transcript_id "MSTRG.58389.1"; exon_number "1"; scaffold_2713 StringTie exon 32294 32739 1000 + . gene_id "MSTRG.58402"; transcript_id "MSTRG.58402.1"; exon_number "1"; scaffold_27132 StringTie exon 3986 4455 1000 . . gene_id "MSTRG.58407"; transcript_id "MSTRG.58407.1"; exon_number "1"; scaffold_27139 StringTie exon 878 1123 1000 . . gene_id "MSTRG.58412"; transcript_id "MSTRG.58412.1"; exon_number "1"; scaffold_2715 StringTie exon 39910 40171 1000 . . gene_id "MSTRG.58433"; transcript_id "MSTRG.58433.1"; exon_number "1"; scaffold_2718 StringTie exon 6249 6259 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "1"; scaffold_2718 StringTie exon 77328 77723 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "2"; scaffold_2718 StringTie exon 77844 77905 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "3"; scaffold_2718 StringTie exon 77985 78116 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "4"; scaffold_2718 StringTie exon 78317 78425 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "5"; scaffold_2718 StringTie exon 78580 78794 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "6"; scaffold_2718 StringTie exon 78886 78954 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "7"; scaffold_2718 StringTie exon 79035 79121 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "8"; scaffold_2718 StringTie exon 79205 79319 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "9"; scaffold_2718 StringTie exon 79483 79623 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "10"; scaffold_2718 StringTie exon 80939 81102 1000 - . gene_id "MSTRG.58450"; transcript_id "MSTRG.58450.1"; exon_number "11"; scaffold_27199 StringTie exon 3614 3860 1000 . . gene_id "MSTRG.58476"; transcript_id "MSTRG.58476.1"; exon_number "1"; scaffold_272 StringTie exon 276358 276702 1000 . . gene_id "MSTRG.58498"; transcript_id "MSTRG.58498.1"; exon_number "1"; scaffold_272 StringTie exon 369182 369192 1000 + . gene_id "MSTRG.58513"; transcript_id "MSTRG.58513.2"; exon_number "1"; scaffold_272 StringTie exon 369340 369435 1000 + . gene_id "MSTRG.58513"; transcript_id "MSTRG.58513.2"; exon_number "2"; scaffold_272 StringTie exon 369684 369722 1000 + . gene_id "MSTRG.58513"; transcript_id "MSTRG.58513.2"; exon_number "3"; scaffold_272 StringTie exon 369872 370063 1000 + . gene_id "MSTRG.58513"; transcript_id "MSTRG.58513.2"; exon_number "4"; scaffold_272 StringTie exon 370149 370399 1000 + . gene_id "MSTRG.58513"; transcript_id "MSTRG.58513.2"; exon_number "5"; scaffold_272 StringTie exon 370637 370654 1000 + . gene_id "MSTRG.58513"; transcript_id "MSTRG.58513.2"; exon_number "6"; scaffold_27201 StringTie exon 2449 2536 1000 - . gene_id "MSTRG.58543"; transcript_id "MSTRG.58543.1"; exon_number "1"; scaffold_27201 StringTie exon 2796 2977 1000 - . gene_id "MSTRG.58543"; transcript_id "MSTRG.58543.1"; exon_number "2"; scaffold_2721 StringTie exon 31646 31948 1000 . . gene_id "MSTRG.58553"; transcript_id "MSTRG.58553.1"; exon_number "1"; scaffold_2721 StringTie exon 67672 67871 1000 . . gene_id "MSTRG.58554"; transcript_id "MSTRG.58554.1"; exon_number "1"; scaffold_27212 StringTie exon 440 673 1000 . . gene_id "MSTRG.58559"; transcript_id "MSTRG.58559.1"; exon_number "1"; scaffold_2722 StringTie exon 8686 8910 1000 . . gene_id "MSTRG.58562"; transcript_id "MSTRG.58562.1"; exon_number "1"; scaffold_2725 StringTie exon 30930 31123 1000 + . gene_id "MSTRG.58596"; transcript_id "MSTRG.58596.1"; exon_number "1"; scaffold_2725 StringTie exon 32567 32699 1000 + . gene_id "MSTRG.58596"; transcript_id "MSTRG.58596.1"; exon_number "2"; scaffold_2725 StringTie exon 32896 34176 1000 + . gene_id "MSTRG.58596"; transcript_id "MSTRG.58596.1"; exon_number "3"; scaffold_2725 StringTie exon 32273 32408 1000 + . gene_id "MSTRG.58596"; transcript_id "MSTRG.58596.2"; exon_number "1"; scaffold_2725 StringTie exon 32567 32699 1000 + . gene_id "MSTRG.58596"; transcript_id "MSTRG.58596.2"; exon_number "2"; scaffold_2725 StringTie exon 32896 34152 1000 + . gene_id "MSTRG.58596"; transcript_id "MSTRG.58596.2"; exon_number "3"; scaffold_2727 StringTie exon 37529 37824 1000 . . gene_id "MSTRG.58621"; transcript_id "MSTRG.58621.1"; exon_number "1"; scaffold_2727 StringTie exon 76008 76615 1000 . . gene_id "MSTRG.58626"; transcript_id "MSTRG.58626.1"; exon_number "1"; scaffold_2729 StringTie exon 46106 46343 1000 . . gene_id "MSTRG.58643"; transcript_id "MSTRG.58643.1"; exon_number "1"; scaffold_273 StringTie exon 80395 80637 1000 . . gene_id "MSTRG.58661"; transcript_id "MSTRG.58661.1"; exon_number "1"; scaffold_273 StringTie exon 134522 134709 1000 + . gene_id "MSTRG.58665"; transcript_id "MSTRG.58665.1"; exon_number "1"; scaffold_273 StringTie exon 135149 136715 1000 + . gene_id "MSTRG.58665"; transcript_id "MSTRG.58665.1"; exon_number "2"; scaffold_273 StringTie exon 217551 217947 1000 . . gene_id "MSTRG.58670"; transcript_id "MSTRG.58670.1"; exon_number "1"; scaffold_273 StringTie exon 424485 424703 1000 . . gene_id "MSTRG.58683"; transcript_id "MSTRG.58683.1"; exon_number "1"; scaffold_273 StringTie exon 512417 512791 1000 . . gene_id "MSTRG.58690"; transcript_id "MSTRG.58690.1"; exon_number "1"; scaffold_273 StringTie exon 639773 640112 1000 . . gene_id "MSTRG.58694"; transcript_id "MSTRG.58694.1"; exon_number "1"; scaffold_273 StringTie exon 810514 810970 1000 . . gene_id "MSTRG.58703"; transcript_id "MSTRG.58703.1"; exon_number "1"; scaffold_273 StringTie exon 883879 883907 1000 - . gene_id "MSTRG.58710"; transcript_id "MSTRG.58710.1"; exon_number "1"; scaffold_273 StringTie exon 885192 885287 1000 - . gene_id "MSTRG.58710"; transcript_id "MSTRG.58710.1"; exon_number "2"; scaffold_273 StringTie exon 885475 885602 1000 - . gene_id "MSTRG.58710"; transcript_id "MSTRG.58710.1"; exon_number "3"; scaffold_273 StringTie exon 892003 892157 1000 - . gene_id "MSTRG.58710"; transcript_id "MSTRG.58710.1"; exon_number "4"; scaffold_273 StringTie exon 895173 895246 1000 - . gene_id "MSTRG.58710"; transcript_id "MSTRG.58710.1"; exon_number "5"; scaffold_273 StringTie exon 895557 895633 1000 - . gene_id "MSTRG.58710"; transcript_id "MSTRG.58710.1"; exon_number "6"; scaffold_273 StringTie exon 898033 898120 1000 - . gene_id "MSTRG.58710"; transcript_id "MSTRG.58710.1"; exon_number "7"; scaffold_27303 StringTie exon 2505 2570 1000 + . gene_id "MSTRG.58738"; transcript_id "MSTRG.58738.1"; exon_number "1"; scaffold_27303 StringTie exon 3193 3270 1000 + . gene_id "MSTRG.58738"; transcript_id "MSTRG.58738.1"; exon_number "2"; scaffold_27303 StringTie exon 3998 4056 1000 + . gene_id "MSTRG.58738"; transcript_id "MSTRG.58738.1"; exon_number "3"; scaffold_27303 StringTie exon 4420 4498 1000 + . gene_id "MSTRG.58738"; transcript_id "MSTRG.58738.1"; exon_number "4"; scaffold_27303 StringTie exon 4668 4790 1000 + . gene_id "MSTRG.58738"; transcript_id "MSTRG.58738.1"; exon_number "5"; scaffold_2732 StringTie exon 45276 45488 1000 . . gene_id "MSTRG.58754"; transcript_id "MSTRG.58754.1"; exon_number "1"; scaffold_2733 StringTie exon 12652 13230 1000 . . gene_id "MSTRG.58766"; transcript_id "MSTRG.58766.1"; exon_number "1"; scaffold_27342 StringTie exon 4342 4562 1000 . . gene_id "MSTRG.58785"; transcript_id "MSTRG.58785.1"; exon_number "1"; scaffold_27347 StringTie exon 1242 1590 1000 + . gene_id "MSTRG.58786"; transcript_id "MSTRG.58786.1"; exon_number "1"; scaffold_27347 StringTie exon 1717 2710 1000 + . gene_id "MSTRG.58786"; transcript_id "MSTRG.58786.1"; exon_number "2"; scaffold_27347 StringTie exon 2886 3525 1000 + . gene_id "MSTRG.58786"; transcript_id "MSTRG.58786.1"; exon_number "3"; scaffold_2736 StringTie exon 6451 6654 1000 . . gene_id "MSTRG.58801"; transcript_id "MSTRG.58801.1"; exon_number "1"; scaffold_2736 StringTie exon 20366 21439 1000 . . gene_id "MSTRG.58802"; transcript_id "MSTRG.58802.1"; exon_number "1"; scaffold_27363 StringTie exon 3736 4006 1000 . . gene_id "MSTRG.58810"; transcript_id "MSTRG.58810.1"; exon_number "1"; scaffold_27376 StringTie exon 171 572 1000 . . gene_id "MSTRG.58825"; transcript_id "MSTRG.58825.1"; exon_number "1"; scaffold_2738 StringTie exon 29872 30072 1000 . . gene_id "MSTRG.58835"; transcript_id "MSTRG.58835.1"; exon_number "1"; scaffold_2739 StringTie exon 11873 12186 1000 . . gene_id "MSTRG.58845"; transcript_id "MSTRG.58845.1"; exon_number "1"; scaffold_274 StringTie exon 281515 282491 1000 . . gene_id "MSTRG.58864"; transcript_id "MSTRG.58864.1"; exon_number "1"; scaffold_274 StringTie exon 371947 372763 1000 + . gene_id "MSTRG.58875"; transcript_id "MSTRG.58875.1"; exon_number "1"; scaffold_274 StringTie exon 391557 391860 1000 . . gene_id "MSTRG.58879"; transcript_id "MSTRG.58879.1"; exon_number "1"; scaffold_274 StringTie exon 874312 874360 1000 + . gene_id "MSTRG.58905"; transcript_id "MSTRG.58905.1"; exon_number "1"; scaffold_274 StringTie exon 874616 874831 1000 + . gene_id "MSTRG.58905"; transcript_id "MSTRG.58905.1"; exon_number "2"; scaffold_274 StringTie exon 874942 875138 1000 + . gene_id "MSTRG.58905"; transcript_id "MSTRG.58905.1"; exon_number "3"; scaffold_274 StringTie exon 877731 877848 1000 + . gene_id "MSTRG.58905"; transcript_id "MSTRG.58905.1"; exon_number "4"; scaffold_274 StringTie exon 877953 878141 1000 + . gene_id "MSTRG.58905"; transcript_id "MSTRG.58905.1"; exon_number "5"; scaffold_2741 StringTie exon 62490 62779 1000 . . gene_id "MSTRG.58940"; transcript_id "MSTRG.58940.1"; exon_number "1"; scaffold_27420 StringTie exon 3348 3558 1000 . . gene_id "MSTRG.58947"; transcript_id "MSTRG.58947.1"; exon_number "1"; scaffold_27426 StringTie exon 1615 1836 1000 . . gene_id "MSTRG.58951"; transcript_id "MSTRG.58951.1"; exon_number "1"; scaffold_2743 StringTie exon 83762 83978 1000 . . gene_id "MSTRG.58964"; transcript_id "MSTRG.58964.1"; exon_number "1"; scaffold_2747 StringTie exon 45139 45442 1000 - . gene_id "MSTRG.58999"; transcript_id "MSTRG.58999.1"; exon_number "1"; scaffold_2747 StringTie exon 45558 45776 1000 - . gene_id "MSTRG.58999"; transcript_id "MSTRG.58999.1"; exon_number "2"; scaffold_2747 StringTie exon 46004 46081 1000 - . gene_id "MSTRG.58999"; transcript_id "MSTRG.58999.1"; exon_number "3"; scaffold_2747 StringTie exon 46573 46800 1000 - . gene_id "MSTRG.58999"; transcript_id "MSTRG.58999.1"; exon_number "4"; scaffold_2747 StringTie exon 46990 47063 1000 - . gene_id "MSTRG.58999"; transcript_id "MSTRG.58999.1"; exon_number "5"; scaffold_2747 StringTie exon 66715 66963 1000 . . gene_id "MSTRG.59004"; transcript_id "MSTRG.59004.1"; exon_number "1"; scaffold_2748 StringTie exon 46055 46444 1000 . . gene_id "MSTRG.59013"; transcript_id "MSTRG.59013.1"; exon_number "1"; scaffold_2749 StringTie exon 23056 23304 1000 . . gene_id "MSTRG.59022"; transcript_id "MSTRG.59022.1"; exon_number "1"; scaffold_27499 StringTie exon 692 960 1000 . . gene_id "MSTRG.59031"; transcript_id "MSTRG.59031.1"; exon_number "1"; scaffold_275 StringTie exon 129999 130050 1000 - . gene_id "MSTRG.59040"; transcript_id "MSTRG.59040.11"; exon_number "1"; scaffold_275 StringTie exon 130375 130457 1000 - . gene_id "MSTRG.59040"; transcript_id "MSTRG.59040.11"; exon_number "2"; scaffold_275 StringTie exon 137596 137836 1000 - . gene_id "MSTRG.59040"; transcript_id "MSTRG.59040.11"; exon_number "3"; scaffold_275 StringTie exon 422105 422344 1000 . . gene_id "MSTRG.59062"; transcript_id "MSTRG.59062.1"; exon_number "1"; scaffold_275 StringTie exon 768231 768565 1000 - . gene_id "MSTRG.59096"; transcript_id "MSTRG.59096.1"; exon_number "1"; scaffold_275 StringTie exon 771270 771412 1000 - . gene_id "MSTRG.59096"; transcript_id "MSTRG.59096.1"; exon_number "2"; scaffold_275 StringTie exon 771621 771780 1000 - . gene_id "MSTRG.59096"; transcript_id "MSTRG.59096.1"; exon_number "3"; scaffold_275 StringTie exon 771965 772116 1000 - . gene_id "MSTRG.59096"; transcript_id "MSTRG.59096.1"; exon_number "4"; scaffold_275 StringTie exon 773278 773459 1000 - . gene_id "MSTRG.59096"; transcript_id "MSTRG.59096.1"; exon_number "5"; scaffold_275 StringTie exon 773828 773852 1000 - . gene_id "MSTRG.59096"; transcript_id "MSTRG.59096.1"; exon_number "6"; scaffold_2751 StringTie exon 24225 24604 1000 . . gene_id "MSTRG.59133"; transcript_id "MSTRG.59133.1"; exon_number "1"; scaffold_27559 StringTie exon 2151 2370 1000 . . gene_id "MSTRG.59186"; transcript_id "MSTRG.59186.1"; exon_number "1"; scaffold_2757 StringTie exon 72266 72612 1000 . . gene_id "MSTRG.59197"; transcript_id "MSTRG.59197.1"; exon_number "1"; scaffold_276 StringTie exon 171042 171281 1000 . . gene_id "MSTRG.59232"; transcript_id "MSTRG.59232.1"; exon_number "1"; scaffold_276 StringTie exon 992844 993245 1000 . . gene_id "MSTRG.59292"; transcript_id "MSTRG.59292.1"; exon_number "1"; scaffold_2764 StringTie exon 75439 75676 1000 . . gene_id "MSTRG.59345"; transcript_id "MSTRG.59345.1"; exon_number "1"; scaffold_27667 StringTie exon 4431 4643 1000 . . gene_id "MSTRG.59379"; transcript_id "MSTRG.59379.1"; exon_number "1"; scaffold_27671 StringTie exon 3610 4032 1000 . . gene_id "MSTRG.59384"; transcript_id "MSTRG.59384.1"; exon_number "1"; scaffold_27675 StringTie exon 2624 2870 1000 . . gene_id "MSTRG.59385"; transcript_id "MSTRG.59385.1"; exon_number "1"; scaffold_2768 StringTie exon 82448 82661 1000 . . gene_id "MSTRG.59395"; transcript_id "MSTRG.59395.1"; exon_number "1"; scaffold_2769 StringTie exon 13775 14444 1000 . . gene_id "MSTRG.59407"; transcript_id "MSTRG.59407.1"; exon_number "1"; scaffold_277 StringTie exon 288679 289007 1000 . . gene_id "MSTRG.59436"; transcript_id "MSTRG.59436.1"; exon_number "1"; scaffold_277 StringTie exon 932621 932870 1000 . . gene_id "MSTRG.59467"; transcript_id "MSTRG.59467.1"; exon_number "1"; scaffold_2770 StringTie exon 70681 70928 1000 . . gene_id "MSTRG.59488"; transcript_id "MSTRG.59488.1"; exon_number "1"; scaffold_2772 StringTie exon 78118 78353 1000 . . gene_id "MSTRG.59512"; transcript_id "MSTRG.59512.1"; exon_number "1"; scaffold_27741 StringTie exon 3020 3227 1000 . . gene_id "MSTRG.59533"; transcript_id "MSTRG.59533.1"; exon_number "1"; scaffold_27756 StringTie exon 1321 1453 1000 + . gene_id "MSTRG.59545"; transcript_id "MSTRG.59545.1"; exon_number "1"; scaffold_27756 StringTie exon 1549 1668 1000 + . gene_id "MSTRG.59545"; transcript_id "MSTRG.59545.1"; exon_number "2"; scaffold_27756 StringTie exon 1788 1922 1000 + . gene_id "MSTRG.59545"; transcript_id "MSTRG.59545.1"; exon_number "3"; scaffold_27756 StringTie exon 2071 2133 1000 + . gene_id "MSTRG.59545"; transcript_id "MSTRG.59545.1"; exon_number "4"; scaffold_27765 StringTie exon 563 821 1000 . . gene_id "MSTRG.59553"; transcript_id "MSTRG.59553.1"; exon_number "1"; scaffold_2778 StringTie exon 44032 44264 1000 . . gene_id "MSTRG.59565"; transcript_id "MSTRG.59565.1"; exon_number "1"; scaffold_27790 StringTie exon 594 653 1000 - . gene_id "MSTRG.59576"; transcript_id "MSTRG.59576.1"; exon_number "1"; scaffold_27790 StringTie exon 853 1003 1000 - . gene_id "MSTRG.59576"; transcript_id "MSTRG.59576.1"; exon_number "2"; scaffold_27791 StringTie exon 3967 4203 1000 . . gene_id "MSTRG.59579"; transcript_id "MSTRG.59579.1"; exon_number "1"; scaffold_278 StringTie exon 65764 65987 1000 . . gene_id "MSTRG.59589"; transcript_id "MSTRG.59589.1"; exon_number "1"; scaffold_278 StringTie exon 66631 67224 1000 . . gene_id "MSTRG.59590"; transcript_id "MSTRG.59590.1"; exon_number "1"; scaffold_278 StringTie exon 127445 127687 1000 . . gene_id "MSTRG.59592"; transcript_id "MSTRG.59592.1"; exon_number "1"; scaffold_278 StringTie exon 173832 173860 1000 - . gene_id "MSTRG.59601"; transcript_id "MSTRG.59601.1"; exon_number "1"; scaffold_278 StringTie exon 175587 175718 1000 - . gene_id "MSTRG.59601"; transcript_id "MSTRG.59601.1"; exon_number "2"; scaffold_278 StringTie exon 177208 177282 1000 - . gene_id "MSTRG.59601"; transcript_id "MSTRG.59601.1"; exon_number "3"; scaffold_278 StringTie exon 186214 186292 1000 - . gene_id "MSTRG.59601"; transcript_id "MSTRG.59601.1"; exon_number "4"; scaffold_27814 StringTie exon 4406 4653 1000 . . gene_id "MSTRG.59683"; transcript_id "MSTRG.59683.1"; exon_number "1"; scaffold_2786 StringTie exon 12457 12665 1000 . . gene_id "MSTRG.59728"; transcript_id "MSTRG.59728.1"; exon_number "1"; scaffold_2787 StringTie exon 33381 33531 1000 - . gene_id "MSTRG.59741"; transcript_id "MSTRG.59741.2"; exon_number "1"; scaffold_2787 StringTie exon 37275 37433 1000 - . gene_id "MSTRG.59741"; transcript_id "MSTRG.59741.2"; exon_number "2"; scaffold_2789 StringTie exon 46860 46948 1000 - . gene_id "MSTRG.59767"; transcript_id "MSTRG.59767.1"; exon_number "1"; scaffold_2789 StringTie exon 47285 47417 1000 - . gene_id "MSTRG.59767"; transcript_id "MSTRG.59767.1"; exon_number "2"; scaffold_279 StringTie exon 374409 374875 1000 . . gene_id "MSTRG.59807"; transcript_id "MSTRG.59807.1"; exon_number "1"; scaffold_279 StringTie exon 378878 379385 1000 . . gene_id "MSTRG.59808"; transcript_id "MSTRG.59808.1"; exon_number "1"; scaffold_279 StringTie exon 436003 436232 1000 . . gene_id "MSTRG.59816"; transcript_id "MSTRG.59816.1"; exon_number "1"; scaffold_279 StringTie exon 551184 551496 1000 . . gene_id "MSTRG.59823"; transcript_id "MSTRG.59823.1"; exon_number "1"; scaffold_279 StringTie exon 1001961 1002333 1000 . . gene_id "MSTRG.59849"; transcript_id "MSTRG.59849.1"; exon_number "1"; scaffold_2793 StringTie exon 34879 35255 1000 . . gene_id "MSTRG.59898"; transcript_id "MSTRG.59898.1"; exon_number "1"; scaffold_27936 StringTie exon 1573 1805 1000 . . gene_id "MSTRG.59903"; transcript_id "MSTRG.59903.1"; exon_number "1"; scaffold_27942 StringTie exon 52 294 1000 . . gene_id "MSTRG.59911"; transcript_id "MSTRG.59911.1"; exon_number "1"; scaffold_2796 StringTie exon 25359 26824 1000 . . gene_id "MSTRG.59926"; transcript_id "MSTRG.59926.1"; exon_number "1"; scaffold_2796 StringTie exon 43415 43729 1000 . . gene_id "MSTRG.59927"; transcript_id "MSTRG.59927.1"; exon_number "1"; scaffold_2796 StringTie exon 79827 80102 1000 . . gene_id "MSTRG.59931"; transcript_id "MSTRG.59931.1"; exon_number "1"; scaffold_2797 StringTie exon 24222 24470 1000 . . gene_id "MSTRG.59937"; transcript_id "MSTRG.59937.1"; exon_number "1"; scaffold_27984 StringTie exon 2319 2535 1000 . . gene_id "MSTRG.59967"; transcript_id "MSTRG.59967.1"; exon_number "1"; scaffold_28 StringTie exon 282089 282415 1000 . . gene_id "MSTRG.60007"; transcript_id "MSTRG.60007.1"; exon_number "1"; scaffold_28 StringTie exon 332702 332967 1000 + . gene_id "MSTRG.60011"; transcript_id "MSTRG.60011.1"; exon_number "1"; scaffold_28 StringTie exon 361746 361766 1000 + . gene_id "MSTRG.60011"; transcript_id "MSTRG.60011.1"; exon_number "2"; scaffold_28 StringTie exon 724486 724703 1000 . . gene_id "MSTRG.60047"; transcript_id "MSTRG.60047.1"; exon_number "1"; scaffold_28 StringTie exon 1489364 1489485 1000 + . gene_id "MSTRG.60107"; transcript_id "MSTRG.60107.1"; exon_number "1"; scaffold_28 StringTie exon 1490494 1490615 1000 + . gene_id "MSTRG.60107"; transcript_id "MSTRG.60107.1"; exon_number "2"; scaffold_28 StringTie exon 1490846 1490987 1000 + . gene_id "MSTRG.60107"; transcript_id "MSTRG.60107.1"; exon_number "3"; scaffold_28 StringTie exon 1493027 1493067 1000 + . gene_id "MSTRG.60107"; transcript_id "MSTRG.60107.1"; exon_number "4"; scaffold_28 StringTie exon 1754977 1755293 1000 . . gene_id "MSTRG.60128"; transcript_id "MSTRG.60128.1"; exon_number "1"; scaffold_28 StringTie exon 1839226 1839433 1000 . . gene_id "MSTRG.60133"; transcript_id "MSTRG.60133.1"; exon_number "1"; scaffold_28 StringTie exon 1940282 1940599 1000 . . gene_id "MSTRG.60135"; transcript_id "MSTRG.60135.1"; exon_number "1"; scaffold_28 StringTie exon 2388371 2388614 1000 - . gene_id "MSTRG.60186"; transcript_id "MSTRG.60186.1"; exon_number "1"; scaffold_280 StringTie exon 16358 16647 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "1"; scaffold_280 StringTie exon 32523 33148 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "2"; scaffold_280 StringTie exon 33437 33595 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "3"; scaffold_280 StringTie exon 33786 33890 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "4"; scaffold_280 StringTie exon 34987 35222 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "5"; scaffold_280 StringTie exon 35358 35489 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "6"; scaffold_280 StringTie exon 35852 35958 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "7"; scaffold_280 StringTie exon 40419 40563 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "8"; scaffold_280 StringTie exon 40974 41070 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "9"; scaffold_280 StringTie exon 41255 41433 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "10"; scaffold_280 StringTie exon 41723 41791 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "11"; scaffold_280 StringTie exon 41902 41939 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "12"; scaffold_280 StringTie exon 42100 42190 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "13"; scaffold_280 StringTie exon 42595 42663 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "14"; scaffold_280 StringTie exon 42801 42838 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "15"; scaffold_280 StringTie exon 43082 43172 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "16"; scaffold_280 StringTie exon 43290 43358 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "17"; scaffold_280 StringTie exon 43467 43504 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "18"; scaffold_280 StringTie exon 43618 43708 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "19"; scaffold_280 StringTie exon 44520 44629 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "20"; scaffold_280 StringTie exon 44715 44814 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "21"; scaffold_280 StringTie exon 44914 44951 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "22"; scaffold_280 StringTie exon 45086 45176 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "23"; scaffold_280 StringTie exon 48395 48484 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "24"; scaffold_280 StringTie exon 52793 52912 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "25"; scaffold_280 StringTie exon 53015 53104 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "26"; scaffold_280 StringTie exon 53199 53291 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "27"; scaffold_280 StringTie exon 53407 53475 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "28"; scaffold_280 StringTie exon 53582 53665 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "29"; scaffold_280 StringTie exon 58129 58212 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "30"; scaffold_280 StringTie exon 59512 59601 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "31"; scaffold_280 StringTie exon 59850 59960 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "32"; scaffold_280 StringTie exon 62214 63168 1000 + . gene_id "MSTRG.60196"; transcript_id "MSTRG.60196.1"; exon_number "33"; scaffold_280 StringTie exon 247907 249246 1000 . . gene_id "MSTRG.60204"; transcript_id "MSTRG.60204.1"; exon_number "1"; scaffold_280 StringTie exon 356926 357164 1000 . . gene_id "MSTRG.60216"; transcript_id "MSTRG.60216.1"; exon_number "1"; scaffold_280 StringTie exon 542786 542924 1000 - . gene_id "MSTRG.60226"; transcript_id "MSTRG.60226.1"; exon_number "1"; scaffold_280 StringTie exon 543224 543322 1000 - . gene_id "MSTRG.60226"; transcript_id "MSTRG.60226.1"; exon_number "2"; scaffold_280 StringTie exon 545217 545396 1000 - . gene_id "MSTRG.60226"; transcript_id "MSTRG.60226.1"; exon_number "3"; scaffold_280 StringTie exon 545497 545596 1000 - . gene_id "MSTRG.60226"; transcript_id "MSTRG.60226.1"; exon_number "4"; scaffold_280 StringTie exon 567094 568569 1000 - . gene_id "MSTRG.60231"; transcript_id "MSTRG.60231.1"; exon_number "1"; scaffold_280 StringTie exon 568731 569024 1000 - . gene_id "MSTRG.60231"; transcript_id "MSTRG.60231.1"; exon_number "2"; scaffold_280 StringTie exon 569262 569358 1000 - . gene_id "MSTRG.60231"; transcript_id "MSTRG.60231.1"; exon_number "3"; scaffold_280 StringTie exon 569458 569557 1000 - . gene_id "MSTRG.60231"; transcript_id "MSTRG.60231.1"; exon_number "4"; scaffold_280 StringTie exon 569778 569889 1000 - . gene_id "MSTRG.60231"; transcript_id "MSTRG.60231.1"; exon_number "5"; scaffold_280 StringTie exon 570869 571103 1000 - . gene_id "MSTRG.60231"; transcript_id "MSTRG.60231.1"; exon_number "6"; scaffold_280 StringTie exon 603842 603896 1000 + . gene_id "MSTRG.60234"; transcript_id "MSTRG.60234.2"; exon_number "1"; scaffold_280 StringTie exon 604385 604511 1000 + . gene_id "MSTRG.60234"; transcript_id "MSTRG.60234.2"; exon_number "2"; scaffold_280 StringTie exon 604681 604797 1000 + . gene_id "MSTRG.60234"; transcript_id "MSTRG.60234.2"; exon_number "3"; scaffold_280 StringTie exon 979232 979576 1000 . . gene_id "MSTRG.60259"; transcript_id "MSTRG.60259.1"; exon_number "1"; scaffold_2800 StringTie exon 45377 45697 1000 . . gene_id "MSTRG.60267"; transcript_id "MSTRG.60267.1"; exon_number "1"; scaffold_2801 StringTie exon 55171 55345 1000 + . gene_id "MSTRG.60282"; transcript_id "MSTRG.60282.2"; exon_number "1"; scaffold_2801 StringTie exon 55511 55606 1000 + . gene_id "MSTRG.60282"; transcript_id "MSTRG.60282.2"; exon_number "2"; scaffold_2801 StringTie exon 58994 59087 1000 + . gene_id "MSTRG.60282"; transcript_id "MSTRG.60282.2"; exon_number "3"; scaffold_2802 StringTie exon 2497 3090 1000 . . gene_id "MSTRG.60290"; transcript_id "MSTRG.60290.1"; exon_number "1"; scaffold_28028 StringTie exon 3344 3600 1000 . . gene_id "MSTRG.60303"; transcript_id "MSTRG.60303.1"; exon_number "1"; scaffold_2803 StringTie exon 40320 40559 1000 . . gene_id "MSTRG.60308"; transcript_id "MSTRG.60308.1"; exon_number "1"; scaffold_2804 StringTie exon 55636 56265 1000 + . gene_id "MSTRG.60326"; transcript_id "MSTRG.60326.1"; exon_number "1"; scaffold_2804 StringTie exon 57283 57393 1000 + . gene_id "MSTRG.60326"; transcript_id "MSTRG.60326.1"; exon_number "2"; scaffold_2804 StringTie exon 57497 57587 1000 + . gene_id "MSTRG.60326"; transcript_id "MSTRG.60326.1"; exon_number "3"; scaffold_2804 StringTie exon 60316 60429 1000 + . gene_id "MSTRG.60326"; transcript_id "MSTRG.60326.1"; exon_number "4"; scaffold_2804 StringTie exon 60578 60673 1000 + . gene_id "MSTRG.60326"; transcript_id "MSTRG.60326.1"; exon_number "5"; scaffold_2804 StringTie exon 61162 61440 1000 + . gene_id "MSTRG.60326"; transcript_id "MSTRG.60326.1"; exon_number "6"; scaffold_2804 StringTie exon 61596 62509 1000 + . gene_id "MSTRG.60326"; transcript_id "MSTRG.60326.1"; exon_number "7"; scaffold_2805 StringTie exon 80563 81152 1000 . . gene_id "MSTRG.60339"; transcript_id "MSTRG.60339.1"; exon_number "1"; scaffold_2807 StringTie exon 79567 79826 1000 . . gene_id "MSTRG.60371"; transcript_id "MSTRG.60371.1"; exon_number "1"; scaffold_28079 StringTie exon 3348 3629 1000 . . gene_id "MSTRG.60378"; transcript_id "MSTRG.60378.1"; exon_number "1"; scaffold_2808 StringTie exon 32112 32410 1000 . . gene_id "MSTRG.60380"; transcript_id "MSTRG.60380.1"; exon_number "1"; scaffold_281 StringTie exon 458877 459235 1000 . . gene_id "MSTRG.60413"; transcript_id "MSTRG.60413.1"; exon_number "1"; scaffold_281 StringTie exon 749976 750219 1000 . . gene_id "MSTRG.60429"; transcript_id "MSTRG.60429.1"; exon_number "1"; scaffold_2814 StringTie exon 58868 58893 1000 - . gene_id "MSTRG.60494"; transcript_id "MSTRG.60494.1"; exon_number "1"; scaffold_2814 StringTie exon 60392 60628 1000 - . gene_id "MSTRG.60494"; transcript_id "MSTRG.60494.1"; exon_number "2"; scaffold_2816 StringTie exon 17318 17729 1000 . . gene_id "MSTRG.60515"; transcript_id "MSTRG.60515.1"; exon_number "1"; scaffold_2818 StringTie exon 78098 78526 1000 . . gene_id "MSTRG.60534"; transcript_id "MSTRG.60534.1"; exon_number "1"; scaffold_282 StringTie exon 101805 102024 1000 . . gene_id "MSTRG.60551"; transcript_id "MSTRG.60551.1"; exon_number "1"; scaffold_282 StringTie exon 231134 231349 1000 . . gene_id "MSTRG.60565"; transcript_id "MSTRG.60565.1"; exon_number "1"; scaffold_282 StringTie exon 308182 308251 1000 - . gene_id "MSTRG.60567"; transcript_id "MSTRG.60567.1"; exon_number "1"; scaffold_282 StringTie exon 308388 308501 1000 - . gene_id "MSTRG.60567"; transcript_id "MSTRG.60567.1"; exon_number "2"; scaffold_282 StringTie exon 308695 308836 1000 - . gene_id "MSTRG.60567"; transcript_id "MSTRG.60567.1"; exon_number "3"; scaffold_282 StringTie exon 308965 309083 1000 - . gene_id "MSTRG.60567"; transcript_id "MSTRG.60567.1"; exon_number "4"; scaffold_282 StringTie exon 309201 309263 1000 - . gene_id "MSTRG.60567"; transcript_id "MSTRG.60567.1"; exon_number "5"; scaffold_282 StringTie exon 309497 309622 1000 - . gene_id "MSTRG.60567"; transcript_id "MSTRG.60567.1"; exon_number "6"; scaffold_282 StringTie exon 309878 309920 1000 - . gene_id "MSTRG.60567"; transcript_id "MSTRG.60567.1"; exon_number "7"; scaffold_282 StringTie exon 674848 675577 1000 . . gene_id "MSTRG.60590"; transcript_id "MSTRG.60590.1"; exon_number "1"; scaffold_282 StringTie exon 799460 799692 1000 + . gene_id "MSTRG.60598"; transcript_id "MSTRG.60598.1"; exon_number "1"; scaffold_282 StringTie exon 840233 840465 1000 . . gene_id "MSTRG.60600"; transcript_id "MSTRG.60600.1"; exon_number "1"; scaffold_2823 StringTie exon 41715 41728 1000 + . gene_id "MSTRG.60655"; transcript_id "MSTRG.60655.1"; exon_number "1"; scaffold_2823 StringTie exon 42232 42373 1000 + . gene_id "MSTRG.60655"; transcript_id "MSTRG.60655.1"; exon_number "2"; scaffold_2823 StringTie exon 42580 42622 1000 + . gene_id "MSTRG.60655"; transcript_id "MSTRG.60655.1"; exon_number "3"; scaffold_2823 StringTie exon 42728 42808 1000 + . gene_id "MSTRG.60655"; transcript_id "MSTRG.60655.1"; exon_number "4"; scaffold_2823 StringTie exon 42953 43020 1000 + . gene_id "MSTRG.60655"; transcript_id "MSTRG.60655.1"; exon_number "5"; scaffold_2823 StringTie exon 44183 44331 1000 + . gene_id "MSTRG.60655"; transcript_id "MSTRG.60655.1"; exon_number "6"; scaffold_28231 StringTie exon 648 1326 1000 . . gene_id "MSTRG.60665"; transcript_id "MSTRG.60665.1"; exon_number "1"; scaffold_28236 StringTie exon 2656 2873 1000 . . gene_id "MSTRG.60668"; transcript_id "MSTRG.60668.1"; exon_number "1"; scaffold_28239 StringTie exon 2194 2416 1000 . . gene_id "MSTRG.60671"; transcript_id "MSTRG.60671.1"; exon_number "1"; scaffold_2826 StringTie exon 34664 34714 1000 + . gene_id "MSTRG.60701"; transcript_id "MSTRG.60701.1"; exon_number "1"; scaffold_2826 StringTie exon 36990 37031 1000 + . gene_id "MSTRG.60701"; transcript_id "MSTRG.60701.1"; exon_number "2"; scaffold_2826 StringTie exon 37125 37173 1000 + . gene_id "MSTRG.60701"; transcript_id "MSTRG.60701.1"; exon_number "3"; scaffold_2826 StringTie exon 40179 40296 1000 + . gene_id "MSTRG.60701"; transcript_id "MSTRG.60701.1"; exon_number "4"; scaffold_2826 StringTie exon 40501 40674 1000 + . gene_id "MSTRG.60701"; transcript_id "MSTRG.60701.1"; exon_number "5"; scaffold_2826 StringTie exon 40954 41098 1000 + . gene_id "MSTRG.60701"; transcript_id "MSTRG.60701.1"; exon_number "6"; scaffold_2826 StringTie exon 41625 43070 1000 + . gene_id "MSTRG.60701"; transcript_id "MSTRG.60701.1"; exon_number "7"; scaffold_2829 StringTie exon 41259 41581 1000 . . gene_id "MSTRG.60743"; transcript_id "MSTRG.60743.1"; exon_number "1"; scaffold_283 StringTie exon 82050 82145 1000 - . gene_id "MSTRG.60759"; transcript_id "MSTRG.60759.1"; exon_number "1"; scaffold_283 StringTie exon 82595 82714 1000 - . gene_id "MSTRG.60759"; transcript_id "MSTRG.60759.1"; exon_number "2"; scaffold_283 StringTie exon 82840 82972 1000 - . gene_id "MSTRG.60759"; transcript_id "MSTRG.60759.1"; exon_number "3"; scaffold_283 StringTie exon 83080 83187 1000 - . gene_id "MSTRG.60759"; transcript_id "MSTRG.60759.1"; exon_number "4"; scaffold_283 StringTie exon 83303 83374 1000 - . gene_id "MSTRG.60759"; transcript_id "MSTRG.60759.1"; exon_number "5"; scaffold_283 StringTie exon 83657 83731 1000 - . gene_id "MSTRG.60759"; transcript_id "MSTRG.60759.1"; exon_number "6"; scaffold_283 StringTie exon 182240 182679 1000 . . gene_id "MSTRG.60764"; transcript_id "MSTRG.60764.1"; exon_number "1"; scaffold_283 StringTie exon 237064 237284 1000 . . gene_id "MSTRG.60773"; transcript_id "MSTRG.60773.1"; exon_number "1"; scaffold_283 StringTie exon 429219 430382 1000 . . gene_id "MSTRG.60781"; transcript_id "MSTRG.60781.1"; exon_number "1"; scaffold_28319 StringTie exon 2180 2202 1000 + . gene_id "MSTRG.60825"; transcript_id "MSTRG.60825.1"; exon_number "1"; scaffold_28319 StringTie exon 2366 2678 1000 + . gene_id "MSTRG.60825"; transcript_id "MSTRG.60825.1"; exon_number "2"; scaffold_28319 StringTie exon 2998 3147 1000 + . gene_id "MSTRG.60825"; transcript_id "MSTRG.60825.1"; exon_number "3"; scaffold_2832 StringTie exon 16264 16581 1000 . . gene_id "MSTRG.60828"; transcript_id "MSTRG.60828.1"; exon_number "1"; scaffold_28326 StringTie exon 1999 2413 1000 . . gene_id "MSTRG.60836"; transcript_id "MSTRG.60836.1"; exon_number "1"; scaffold_2835 StringTie exon 76853 77081 1000 . . gene_id "MSTRG.60864"; transcript_id "MSTRG.60864.1"; exon_number "1"; scaffold_2837 StringTie exon 50746 50963 1000 . . gene_id "MSTRG.60889"; transcript_id "MSTRG.60889.1"; exon_number "1"; scaffold_28372 StringTie exon 1807 2037 1000 . . gene_id "MSTRG.60895"; transcript_id "MSTRG.60895.1"; exon_number "1"; scaffold_2838 StringTie exon 16454 16689 1000 . . gene_id "MSTRG.60902"; transcript_id "MSTRG.60902.1"; exon_number "1"; scaffold_2839 StringTie exon 34438 34494 1000 + . gene_id "MSTRG.60913"; transcript_id "MSTRG.60913.1"; exon_number "1"; scaffold_2839 StringTie exon 34942 35058 1000 + . gene_id "MSTRG.60913"; transcript_id "MSTRG.60913.1"; exon_number "2"; scaffold_2839 StringTie exon 35276 35447 1000 + . gene_id "MSTRG.60913"; transcript_id "MSTRG.60913.1"; exon_number "3"; scaffold_2839 StringTie exon 37641 37773 1000 + . gene_id "MSTRG.60913"; transcript_id "MSTRG.60913.1"; exon_number "4"; scaffold_284 StringTie exon 207467 207675 1000 . . gene_id "MSTRG.60931"; transcript_id "MSTRG.60931.1"; exon_number "1"; scaffold_284 StringTie exon 231876 232269 1000 . . gene_id "MSTRG.60932"; transcript_id "MSTRG.60932.1"; exon_number "1"; scaffold_284 StringTie exon 488645 489047 1000 . . gene_id "MSTRG.60952"; transcript_id "MSTRG.60952.1"; exon_number "1"; scaffold_284 StringTie exon 851686 852041 1000 . . gene_id "MSTRG.60973"; transcript_id "MSTRG.60973.1"; exon_number "1"; scaffold_284 StringTie exon 871751 873070 1000 - . gene_id "MSTRG.60977"; transcript_id "MSTRG.60977.1"; exon_number "1"; scaffold_284 StringTie exon 874318 874426 1000 - . gene_id "MSTRG.60977"; transcript_id "MSTRG.60977.1"; exon_number "2"; scaffold_284 StringTie exon 874771 874806 1000 - . gene_id "MSTRG.60977"; transcript_id "MSTRG.60977.1"; exon_number "3"; scaffold_2840 StringTie exon 11401 11443 1000 + . gene_id "MSTRG.60986"; transcript_id "MSTRG.60986.1"; exon_number "1"; scaffold_2840 StringTie exon 11736 11780 1000 + . gene_id "MSTRG.60986"; transcript_id "MSTRG.60986.1"; exon_number "2"; scaffold_2840 StringTie exon 11947 12000 1000 + . gene_id "MSTRG.60986"; transcript_id "MSTRG.60986.1"; exon_number "3"; scaffold_2840 StringTie exon 12264 12333 1000 + . gene_id "MSTRG.60986"; transcript_id "MSTRG.60986.1"; exon_number "4"; scaffold_2840 StringTie exon 12428 12535 1000 + . gene_id "MSTRG.60986"; transcript_id "MSTRG.60986.1"; exon_number "5"; scaffold_2840 StringTie exon 12698 12847 1000 + . gene_id "MSTRG.60986"; transcript_id "MSTRG.60986.1"; exon_number "6"; scaffold_2840 StringTie exon 35584 35597 1000 + . gene_id "MSTRG.60989"; transcript_id "MSTRG.60989.1"; exon_number "1"; scaffold_2840 StringTie exon 36035 36216 1000 + . gene_id "MSTRG.60989"; transcript_id "MSTRG.60989.1"; exon_number "2"; scaffold_2840 StringTie exon 36316 36355 1000 + . gene_id "MSTRG.60989"; transcript_id "MSTRG.60989.1"; exon_number "3"; scaffold_28406 StringTie exon 1169 1424 1000 . . gene_id "MSTRG.60998"; transcript_id "MSTRG.60998.1"; exon_number "1"; scaffold_28449 StringTie exon 4057 4401 1000 . . gene_id "MSTRG.61034"; transcript_id "MSTRG.61034.1"; exon_number "1"; scaffold_2846 StringTie exon 11307 11423 1000 + . gene_id "MSTRG.61043"; transcript_id "MSTRG.61043.1"; exon_number "1"; scaffold_2846 StringTie exon 13370 13518 1000 + . gene_id "MSTRG.61043"; transcript_id "MSTRG.61043.1"; exon_number "2"; scaffold_2846 StringTie exon 17543 17698 1000 + . gene_id "MSTRG.61043"; transcript_id "MSTRG.61043.1"; exon_number "3"; scaffold_2847 StringTie exon 6887 7116 1000 . . gene_id "MSTRG.61058"; transcript_id "MSTRG.61058.1"; exon_number "1"; scaffold_2848 StringTie exon 47583 47918 1000 . . gene_id "MSTRG.61071"; transcript_id "MSTRG.61071.1"; exon_number "1"; scaffold_28487 StringTie exon 1 228 1000 . . gene_id "MSTRG.61079"; transcript_id "MSTRG.61079.1"; exon_number "1"; scaffold_285 StringTie exon 270484 270833 1000 . . gene_id "MSTRG.61115"; transcript_id "MSTRG.61115.1"; exon_number "1"; scaffold_285 StringTie exon 306295 306342 1000 + . gene_id "MSTRG.61123"; transcript_id "MSTRG.61123.1"; exon_number "1"; scaffold_285 StringTie exon 306509 306693 1000 + . gene_id "MSTRG.61123"; transcript_id "MSTRG.61123.1"; exon_number "2"; scaffold_285 StringTie exon 307996 308256 1000 + . gene_id "MSTRG.61123"; transcript_id "MSTRG.61123.1"; exon_number "3"; scaffold_285 StringTie exon 483984 484027 1000 - . gene_id "MSTRG.61142"; transcript_id "MSTRG.61142.1"; exon_number "1"; scaffold_285 StringTie exon 484099 484206 1000 - . gene_id "MSTRG.61142"; transcript_id "MSTRG.61142.1"; exon_number "2"; scaffold_285 StringTie exon 484434 484578 1000 - . gene_id "MSTRG.61142"; transcript_id "MSTRG.61142.1"; exon_number "3"; scaffold_285 StringTie exon 986232 986435 1000 . . gene_id "MSTRG.61188"; transcript_id "MSTRG.61188.1"; exon_number "1"; scaffold_2853 StringTie exon 14569 14991 1000 . . gene_id "MSTRG.61215"; transcript_id "MSTRG.61215.1"; exon_number "1"; scaffold_28542 StringTie exon 3608 3837 1000 . . gene_id "MSTRG.61232"; transcript_id "MSTRG.61232.1"; exon_number "1"; scaffold_28564 StringTie exon 4325 4551 1000 . . gene_id "MSTRG.61251"; transcript_id "MSTRG.61251.1"; exon_number "1"; scaffold_28579 StringTie exon 3114 4045 1000 . . gene_id "MSTRG.61260"; transcript_id "MSTRG.61260.1"; exon_number "1"; scaffold_2858 StringTie exon 55969 57916 1000 + . gene_id "MSTRG.61266"; transcript_id "MSTRG.61266.1"; exon_number "1"; scaffold_2859 StringTie exon 79386 79660 1000 . . gene_id "MSTRG.61283"; transcript_id "MSTRG.61283.1"; exon_number "1"; scaffold_286 StringTie exon 26071 26205 1000 - . gene_id "MSTRG.61292"; transcript_id "MSTRG.61292.1"; exon_number "1"; scaffold_286 StringTie exon 29584 29687 1000 - . gene_id "MSTRG.61292"; transcript_id "MSTRG.61292.1"; exon_number "2"; scaffold_286 StringTie exon 61591 61998 1000 - . gene_id "MSTRG.61298"; transcript_id "MSTRG.61298.1"; exon_number "1"; scaffold_286 StringTie exon 62184 62208 1000 - . gene_id "MSTRG.61298"; transcript_id "MSTRG.61298.1"; exon_number "2"; scaffold_286 StringTie exon 70868 71907 1000 . . gene_id "MSTRG.61302"; transcript_id "MSTRG.61302.1"; exon_number "1"; scaffold_286 StringTie exon 219910 220119 1000 . . gene_id "MSTRG.61315"; transcript_id "MSTRG.61315.1"; exon_number "1"; scaffold_286 StringTie exon 342597 343188 1000 . . gene_id "MSTRG.61321"; transcript_id "MSTRG.61321.1"; exon_number "1"; scaffold_286 StringTie exon 442293 442505 1000 . . gene_id "MSTRG.61332"; transcript_id "MSTRG.61332.1"; exon_number "1"; scaffold_286 StringTie exon 468427 468527 1000 - . gene_id "MSTRG.61339"; transcript_id "MSTRG.61339.1"; exon_number "1"; scaffold_286 StringTie exon 468668 468828 1000 - . gene_id "MSTRG.61339"; transcript_id "MSTRG.61339.1"; exon_number "2"; scaffold_286 StringTie exon 468930 468973 1000 - . gene_id "MSTRG.61339"; transcript_id "MSTRG.61339.1"; exon_number "3"; scaffold_286 StringTie exon 535654 536026 1000 . . gene_id "MSTRG.61349"; transcript_id "MSTRG.61349.1"; exon_number "1"; scaffold_2861 StringTie exon 45714 45942 1000 . . gene_id "MSTRG.61393"; transcript_id "MSTRG.61393.1"; exon_number "1"; scaffold_28625 StringTie exon 1399 1637 1000 . . gene_id "MSTRG.61414"; transcript_id "MSTRG.61414.1"; exon_number "1"; scaffold_28629 StringTie exon 18 241 1000 . . gene_id "MSTRG.61417"; transcript_id "MSTRG.61417.1"; exon_number "1"; scaffold_2863 StringTie exon 8068 8299 1000 . . gene_id "MSTRG.61419"; transcript_id "MSTRG.61419.1"; exon_number "1"; scaffold_2866 StringTie exon 36433 37169 1000 . . gene_id "MSTRG.61451"; transcript_id "MSTRG.61451.1"; exon_number "1"; scaffold_28675 StringTie exon 30 271 1000 . . gene_id "MSTRG.61466"; transcript_id "MSTRG.61466.1"; exon_number "1"; scaffold_287 StringTie exon 45392 45496 1000 + . gene_id "MSTRG.61489"; transcript_id "MSTRG.61489.1"; exon_number "1"; scaffold_287 StringTie exon 45673 45754 1000 + . gene_id "MSTRG.61489"; transcript_id "MSTRG.61489.1"; exon_number "2"; scaffold_287 StringTie exon 45860 45968 1000 + . gene_id "MSTRG.61489"; transcript_id "MSTRG.61489.1"; exon_number "3"; scaffold_287 StringTie exon 46065 46206 1000 + . gene_id "MSTRG.61489"; transcript_id "MSTRG.61489.1"; exon_number "4"; scaffold_287 StringTie exon 46321 46350 1000 + . gene_id "MSTRG.61489"; transcript_id "MSTRG.61489.1"; exon_number "5"; scaffold_287 StringTie exon 352847 353122 1000 . . gene_id "MSTRG.61510"; transcript_id "MSTRG.61510.1"; exon_number "1"; scaffold_287 StringTie exon 563926 564515 1000 - . gene_id "MSTRG.61527"; transcript_id "MSTRG.61527.1"; exon_number "1"; scaffold_287 StringTie exon 564700 564786 1000 - . gene_id "MSTRG.61527"; transcript_id "MSTRG.61527.1"; exon_number "2"; scaffold_287 StringTie exon 565058 565096 1000 - . gene_id "MSTRG.61527"; transcript_id "MSTRG.61527.1"; exon_number "3"; scaffold_287 StringTie exon 566811 566951 1000 - . gene_id "MSTRG.61527"; transcript_id "MSTRG.61527.1"; exon_number "4"; scaffold_287 StringTie exon 567368 567578 1000 - . gene_id "MSTRG.61527"; transcript_id "MSTRG.61527.1"; exon_number "5"; scaffold_287 StringTie exon 567814 567878 1000 - . gene_id "MSTRG.61527"; transcript_id "MSTRG.61527.1"; exon_number "6"; scaffold_287 StringTie exon 568631 568822 1000 - . gene_id "MSTRG.61527"; transcript_id "MSTRG.61527.1"; exon_number "7"; scaffold_287 StringTie exon 737768 737980 1000 . . gene_id "MSTRG.61546"; transcript_id "MSTRG.61546.1"; exon_number "1"; scaffold_287 StringTie exon 815863 816168 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "1"; scaffold_287 StringTie exon 816547 816715 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "2"; scaffold_287 StringTie exon 817717 817759 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "3"; scaffold_287 StringTie exon 817975 818116 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "4"; scaffold_287 StringTie exon 819669 819826 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "5"; scaffold_287 StringTie exon 828344 828472 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "6"; scaffold_287 StringTie exon 828722 828851 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "7"; scaffold_287 StringTie exon 828966 829119 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "8"; scaffold_287 StringTie exon 836030 836623 1000 + . gene_id "MSTRG.61551"; transcript_id "MSTRG.61551.1"; exon_number "9"; scaffold_287 StringTie exon 977609 977827 1000 . . gene_id "MSTRG.61564"; transcript_id "MSTRG.61564.1"; exon_number "1"; scaffold_2872 StringTie exon 30475 30748 1000 . . gene_id "MSTRG.61604"; transcript_id "MSTRG.61604.1"; exon_number "1"; scaffold_2873 StringTie exon 259 541 1000 . . gene_id "MSTRG.61613"; transcript_id "MSTRG.61613.1"; exon_number "1"; scaffold_2873 StringTie exon 34558 34828 1000 . . gene_id "MSTRG.61616"; transcript_id "MSTRG.61616.1"; exon_number "1"; scaffold_2874 StringTie exon 63747 64014 1000 . . gene_id "MSTRG.61624"; transcript_id "MSTRG.61624.1"; exon_number "1"; scaffold_2876 StringTie exon 74310 74669 1000 . . gene_id "MSTRG.61647"; transcript_id "MSTRG.61647.1"; exon_number "1"; scaffold_28764 StringTie exon 1640 2068 1000 . . gene_id "MSTRG.61650"; transcript_id "MSTRG.61650.1"; exon_number "1"; scaffold_28766 StringTie exon 171 497 1000 . . gene_id "MSTRG.61652"; transcript_id "MSTRG.61652.1"; exon_number "1"; scaffold_28796 StringTie exon 1782 1986 1000 . . gene_id "MSTRG.61685"; transcript_id "MSTRG.61685.1"; exon_number "1"; scaffold_288 StringTie exon 1094 1342 1000 . . gene_id "MSTRG.61688"; transcript_id "MSTRG.61688.1"; exon_number "1"; scaffold_288 StringTie exon 124040 124253 1000 . . gene_id "MSTRG.61697"; transcript_id "MSTRG.61697.1"; exon_number "1"; scaffold_288 StringTie exon 132982 133196 1000 . . gene_id "MSTRG.61699"; transcript_id "MSTRG.61699.1"; exon_number "1"; scaffold_288 StringTie exon 762493 762715 1000 - . gene_id "MSTRG.61736"; transcript_id "MSTRG.61736.1"; exon_number "1"; scaffold_288 StringTie exon 876395 876780 1000 . . gene_id "MSTRG.61745"; transcript_id "MSTRG.61745.1"; exon_number "1"; scaffold_2881 StringTie exon 1680 1814 1000 - . gene_id "MSTRG.61764"; transcript_id "MSTRG.61764.1"; exon_number "1"; scaffold_2881 StringTie exon 2700 2813 1000 - . gene_id "MSTRG.61764"; transcript_id "MSTRG.61764.1"; exon_number "2"; scaffold_2881 StringTie exon 38662 38903 1000 . . gene_id "MSTRG.61765"; transcript_id "MSTRG.61765.1"; exon_number "1"; scaffold_2884 StringTie exon 15517 15935 1000 . . gene_id "MSTRG.61790"; transcript_id "MSTRG.61790.1"; exon_number "1"; scaffold_2884 StringTie exon 39523 39929 1000 . . gene_id "MSTRG.61792"; transcript_id "MSTRG.61792.1"; exon_number "1"; scaffold_2885 StringTie exon 20194 20443 1000 . . gene_id "MSTRG.61801"; transcript_id "MSTRG.61801.1"; exon_number "1"; scaffold_2889 StringTie exon 21365 21598 1000 . . gene_id "MSTRG.61866"; transcript_id "MSTRG.61866.1"; exon_number "1"; scaffold_289 StringTie exon 3729 3947 1000 . . gene_id "MSTRG.61873"; transcript_id "MSTRG.61873.1"; exon_number "1"; scaffold_289 StringTie exon 750419 750511 1000 + . gene_id "MSTRG.61922"; transcript_id "MSTRG.61922.1"; exon_number "1"; scaffold_289 StringTie exon 753769 753856 1000 + . gene_id "MSTRG.61922"; transcript_id "MSTRG.61922.1"; exon_number "2"; scaffold_289 StringTie exon 754371 754491 1000 + . gene_id "MSTRG.61922"; transcript_id "MSTRG.61922.1"; exon_number "3"; scaffold_289 StringTie exon 755270 755883 1000 + . gene_id "MSTRG.61922"; transcript_id "MSTRG.61922.1"; exon_number "4"; scaffold_289 StringTie exon 1018224 1018496 1000 . . gene_id "MSTRG.61945"; transcript_id "MSTRG.61945.1"; exon_number "1"; scaffold_2890 StringTie exon 47236 47721 1000 . . gene_id "MSTRG.61951"; transcript_id "MSTRG.61951.1"; exon_number "1"; scaffold_2892 StringTie exon 33597 33717 1000 - . gene_id "MSTRG.61978"; transcript_id "MSTRG.61978.1"; exon_number "1"; scaffold_2892 StringTie exon 34415 34484 1000 - . gene_id "MSTRG.61978"; transcript_id "MSTRG.61978.1"; exon_number "2"; scaffold_2892 StringTie exon 34721 34808 1000 - . gene_id "MSTRG.61978"; transcript_id "MSTRG.61978.1"; exon_number "3"; scaffold_2892 StringTie exon 35976 36040 1000 - . gene_id "MSTRG.61978"; transcript_id "MSTRG.61978.1"; exon_number "4"; scaffold_2892 StringTie exon 36548 36558 1000 - . gene_id "MSTRG.61978"; transcript_id "MSTRG.61978.1"; exon_number "5"; scaffold_2893 StringTie exon 7264 7704 1000 . . gene_id "MSTRG.61989"; transcript_id "MSTRG.61989.1"; exon_number "1"; scaffold_2898 StringTie exon 53868 54119 1000 . . gene_id "MSTRG.62035"; transcript_id "MSTRG.62035.1"; exon_number "1"; scaffold_28989 StringTie exon 1469 1825 1000 . . gene_id "MSTRG.62040"; transcript_id "MSTRG.62040.1"; exon_number "1"; scaffold_28990 StringTie exon 1726 2052 1000 . . gene_id "MSTRG.62048"; transcript_id "MSTRG.62048.1"; exon_number "1"; scaffold_29 StringTie exon 121147 121355 1000 . . gene_id "MSTRG.62060"; transcript_id "MSTRG.62060.1"; exon_number "1"; scaffold_29 StringTie exon 154173 154491 1000 . . gene_id "MSTRG.62062"; transcript_id "MSTRG.62062.1"; exon_number "1"; scaffold_29 StringTie exon 276037 276221 1000 - . gene_id "MSTRG.62071"; transcript_id "MSTRG.62071.1"; exon_number "1"; scaffold_29 StringTie exon 285129 285997 1000 - . gene_id "MSTRG.62071"; transcript_id "MSTRG.62071.1"; exon_number "2"; scaffold_29 StringTie exon 364630 364918 1000 . . gene_id "MSTRG.62078"; transcript_id "MSTRG.62078.1"; exon_number "1"; scaffold_29 StringTie exon 977238 977474 1000 . . gene_id "MSTRG.62111"; transcript_id "MSTRG.62111.1"; exon_number "1"; scaffold_29 StringTie exon 1020724 1020956 1000 . . gene_id "MSTRG.62117"; transcript_id "MSTRG.62117.1"; exon_number "1"; scaffold_29 StringTie exon 1448396 1448684 1000 . . gene_id "MSTRG.62130"; transcript_id "MSTRG.62130.1"; exon_number "1"; scaffold_29 StringTie exon 1525063 1525214 1000 - . gene_id "MSTRG.62142"; transcript_id "MSTRG.62142.1"; exon_number "1"; scaffold_29 StringTie exon 1525873 1526040 1000 - . gene_id "MSTRG.62142"; transcript_id "MSTRG.62142.1"; exon_number "2"; scaffold_29 StringTie exon 1527729 1527777 1000 - . gene_id "MSTRG.62142"; transcript_id "MSTRG.62142.1"; exon_number "3"; scaffold_29 StringTie exon 1604160 1604367 1000 . . gene_id "MSTRG.62150"; transcript_id "MSTRG.62150.1"; exon_number "1"; scaffold_29 StringTie exon 1639355 1639979 1000 - . gene_id "MSTRG.62155"; transcript_id "MSTRG.62155.1"; exon_number "1"; scaffold_29 StringTie exon 1696937 1697369 1000 - . gene_id "MSTRG.62159"; transcript_id "MSTRG.62159.1"; exon_number "1"; scaffold_29 StringTie exon 1697565 1697646 1000 - . gene_id "MSTRG.62159"; transcript_id "MSTRG.62159.1"; exon_number "2"; scaffold_29 StringTie exon 1698210 1698350 1000 - . gene_id "MSTRG.62159"; transcript_id "MSTRG.62159.1"; exon_number "3"; scaffold_29 StringTie exon 1698447 1698614 1000 - . gene_id "MSTRG.62159"; transcript_id "MSTRG.62159.1"; exon_number "4"; scaffold_29 StringTie exon 1698874 1698984 1000 - . gene_id "MSTRG.62159"; transcript_id "MSTRG.62159.1"; exon_number "5"; scaffold_29 StringTie exon 1699074 1699162 1000 - . gene_id "MSTRG.62159"; transcript_id "MSTRG.62159.1"; exon_number "6"; scaffold_29 StringTie exon 1699285 1699415 1000 - . gene_id "MSTRG.62159"; transcript_id "MSTRG.62159.1"; exon_number "7"; scaffold_29 StringTie exon 2027918 2028472 1000 . . gene_id "MSTRG.62184"; transcript_id "MSTRG.62184.1"; exon_number "1"; scaffold_29 StringTie exon 2085579 2085968 1000 . . gene_id "MSTRG.62194"; transcript_id "MSTRG.62194.1"; exon_number "1"; scaffold_29 StringTie exon 2179717 2179940 1000 . . gene_id "MSTRG.62206"; transcript_id "MSTRG.62206.1"; exon_number "1"; scaffold_29 StringTie exon 2420619 2421788 1000 . . gene_id "MSTRG.62227"; transcript_id "MSTRG.62227.1"; exon_number "1"; scaffold_290 StringTie exon 96091 96338 1000 . . gene_id "MSTRG.62232"; transcript_id "MSTRG.62232.1"; exon_number "1"; scaffold_290 StringTie exon 725427 725446 1000 - . gene_id "MSTRG.62280"; transcript_id "MSTRG.62280.1"; exon_number "1"; scaffold_290 StringTie exon 727596 727658 1000 - . gene_id "MSTRG.62280"; transcript_id "MSTRG.62280.1"; exon_number "2"; scaffold_290 StringTie exon 727738 727915 1000 - . gene_id "MSTRG.62280"; transcript_id "MSTRG.62280.1"; exon_number "3"; scaffold_290 StringTie exon 728010 728084 1000 - . gene_id "MSTRG.62280"; transcript_id "MSTRG.62280.1"; exon_number "4"; scaffold_290 StringTie exon 728248 728379 1000 - . gene_id "MSTRG.62280"; transcript_id "MSTRG.62280.1"; exon_number "5"; scaffold_290 StringTie exon 925151 925371 1000 . . gene_id "MSTRG.62303"; transcript_id "MSTRG.62303.1"; exon_number "1"; scaffold_29013 StringTie exon 476 688 1000 . . gene_id "MSTRG.62335"; transcript_id "MSTRG.62335.1"; exon_number "1"; scaffold_29028 StringTie exon 2259 2515 1000 . . gene_id "MSTRG.62345"; transcript_id "MSTRG.62345.1"; exon_number "1"; scaffold_2903 StringTie exon 23793 23882 1000 - . gene_id "MSTRG.62349"; transcript_id "MSTRG.62349.1"; exon_number "1"; scaffold_2903 StringTie exon 24061 24277 1000 - . gene_id "MSTRG.62349"; transcript_id "MSTRG.62349.1"; exon_number "2"; scaffold_2907 StringTie exon 13500 13811 1000 . . gene_id "MSTRG.62384"; transcript_id "MSTRG.62384.1"; exon_number "1"; scaffold_2908 StringTie exon 63677 63999 1000 . . gene_id "MSTRG.62395"; transcript_id "MSTRG.62395.1"; exon_number "1"; scaffold_29093 StringTie exon 38 399 1000 . . gene_id "MSTRG.62401"; transcript_id "MSTRG.62401.1"; exon_number "1"; scaffold_291 StringTie exon 91487 91730 1000 . . gene_id "MSTRG.62423"; transcript_id "MSTRG.62423.1"; exon_number "1"; scaffold_291 StringTie exon 313639 313652 1000 - . gene_id "MSTRG.62448"; transcript_id "MSTRG.62448.1"; exon_number "1"; scaffold_291 StringTie exon 324794 324923 1000 - . gene_id "MSTRG.62448"; transcript_id "MSTRG.62448.1"; exon_number "2"; scaffold_291 StringTie exon 325210 325423 1000 - . gene_id "MSTRG.62448"; transcript_id "MSTRG.62448.1"; exon_number "3"; scaffold_291 StringTie exon 328610 328625 1000 - . gene_id "MSTRG.62448"; transcript_id "MSTRG.62448.1"; exon_number "4"; scaffold_291 StringTie exon 410059 410258 1000 . . gene_id "MSTRG.62453"; transcript_id "MSTRG.62453.1"; exon_number "1"; scaffold_291 StringTie exon 578924 579155 1000 . . gene_id "MSTRG.62462"; transcript_id "MSTRG.62462.1"; exon_number "1"; scaffold_291 StringTie exon 606991 607211 1000 . . gene_id "MSTRG.62465"; transcript_id "MSTRG.62465.1"; exon_number "1"; scaffold_291 StringTie exon 979185 979384 1000 . . gene_id "MSTRG.62486"; transcript_id "MSTRG.62486.1"; exon_number "1"; scaffold_2910 StringTie exon 56021 56319 1000 . . gene_id "MSTRG.62496"; transcript_id "MSTRG.62496.1"; exon_number "1"; scaffold_2912 StringTie exon 68111 68377 1000 . . gene_id "MSTRG.62510"; transcript_id "MSTRG.62510.1"; exon_number "1"; scaffold_29122 StringTie exon 1406 1605 1000 - . gene_id "MSTRG.62514"; transcript_id "MSTRG.62514.1"; exon_number "1"; scaffold_29122 StringTie exon 3477 3690 1000 - . gene_id "MSTRG.62514"; transcript_id "MSTRG.62514.1"; exon_number "2"; scaffold_29122 StringTie exon 3871 3957 1000 - . gene_id "MSTRG.62514"; transcript_id "MSTRG.62514.1"; exon_number "3"; scaffold_29144 StringTie exon 2690 3283 1000 + . gene_id "MSTRG.62538"; transcript_id "MSTRG.62538.1"; exon_number "1"; scaffold_29144 StringTie exon 3305 3584 1000 + . gene_id "MSTRG.62538"; transcript_id "MSTRG.62538.1"; exon_number "2"; scaffold_29144 StringTie exon 3757 3903 1000 + . gene_id "MSTRG.62539"; transcript_id "MSTRG.62539.1"; exon_number "1"; scaffold_29144 StringTie exon 4045 4122 1000 + . gene_id "MSTRG.62539"; transcript_id "MSTRG.62539.1"; exon_number "2"; scaffold_2916 StringTie exon 13109 13751 1000 . . gene_id "MSTRG.62556"; transcript_id "MSTRG.62556.1"; exon_number "1"; scaffold_292 StringTie exon 266651 266775 1000 + . gene_id "MSTRG.62600"; transcript_id "MSTRG.62600.2"; exon_number "1"; scaffold_292 StringTie exon 296583 296690 1000 + . gene_id "MSTRG.62600"; transcript_id "MSTRG.62600.2"; exon_number "2"; scaffold_292 StringTie exon 298421 298526 1000 + . gene_id "MSTRG.62600"; transcript_id "MSTRG.62600.2"; exon_number "3"; scaffold_292 StringTie exon 299335 299530 1000 + . gene_id "MSTRG.62600"; transcript_id "MSTRG.62600.2"; exon_number "4"; scaffold_292 StringTie exon 300458 300558 1000 + . gene_id "MSTRG.62600"; transcript_id "MSTRG.62600.2"; exon_number "5"; scaffold_292 StringTie exon 301241 301353 1000 + . gene_id "MSTRG.62600"; transcript_id "MSTRG.62600.2"; exon_number "6"; scaffold_292 StringTie exon 301514 301565 1000 + . gene_id "MSTRG.62600"; transcript_id "MSTRG.62600.2"; exon_number "7"; scaffold_292 StringTie exon 301714 301730 1000 + . gene_id "MSTRG.62600"; transcript_id "MSTRG.62600.2"; exon_number "8"; scaffold_292 StringTie exon 302846 303873 1000 . . gene_id "MSTRG.62602"; transcript_id "MSTRG.62602.1"; exon_number "1"; scaffold_292 StringTie exon 304222 304562 1000 . . gene_id "MSTRG.62603"; transcript_id "MSTRG.62603.1"; exon_number "1"; scaffold_292 StringTie exon 499305 499517 1000 . . gene_id "MSTRG.62614"; transcript_id "MSTRG.62614.1"; exon_number "1"; scaffold_292 StringTie exon 711302 711537 1000 . . gene_id "MSTRG.62620"; transcript_id "MSTRG.62620.1"; exon_number "1"; scaffold_292 StringTie exon 754355 754793 1000 . . gene_id "MSTRG.62626"; transcript_id "MSTRG.62626.1"; exon_number "1"; scaffold_292 StringTie exon 799739 799960 1000 . . gene_id "MSTRG.62630"; transcript_id "MSTRG.62630.1"; exon_number "1"; scaffold_2920 StringTie exon 57611 57827 1000 . . gene_id "MSTRG.62641"; transcript_id "MSTRG.62641.1"; exon_number "1"; scaffold_29206 StringTie exon 2794 3355 1000 - . gene_id "MSTRG.62643"; transcript_id "MSTRG.62643.1"; exon_number "1"; scaffold_29206 StringTie exon 3772 3891 1000 - . gene_id "MSTRG.62643"; transcript_id "MSTRG.62643.1"; exon_number "2"; scaffold_29206 StringTie exon 4037 4255 1000 - . gene_id "MSTRG.62643"; transcript_id "MSTRG.62643.1"; exon_number "3"; scaffold_2921 StringTie exon 34073 34214 1000 + . gene_id "MSTRG.62648"; transcript_id "MSTRG.62648.1"; exon_number "1"; scaffold_2921 StringTie exon 34439 34803 1000 + . gene_id "MSTRG.62648"; transcript_id "MSTRG.62648.1"; exon_number "2"; scaffold_2921 StringTie exon 41629 41753 1000 + . gene_id "MSTRG.62648"; transcript_id "MSTRG.62648.1"; exon_number "3"; scaffold_2921 StringTie exon 41931 42015 1000 + . gene_id "MSTRG.62648"; transcript_id "MSTRG.62648.1"; exon_number "4"; scaffold_2921 StringTie exon 55414 55822 1000 - . gene_id "MSTRG.62652"; transcript_id "MSTRG.62652.1"; exon_number "1"; scaffold_2921 StringTie exon 56019 56176 1000 - . gene_id "MSTRG.62652"; transcript_id "MSTRG.62652.1"; exon_number "2"; scaffold_2921 StringTie exon 60355 60469 1000 - . gene_id "MSTRG.62652"; transcript_id "MSTRG.62652.1"; exon_number "3"; scaffold_2921 StringTie exon 60601 60629 1000 - . gene_id "MSTRG.62652"; transcript_id "MSTRG.62652.1"; exon_number "4"; scaffold_29252 StringTie exon 173 209 1000 + . gene_id "MSTRG.62700"; transcript_id "MSTRG.62700.1"; exon_number "1"; scaffold_29252 StringTie exon 480 564 1000 + . gene_id "MSTRG.62700"; transcript_id "MSTRG.62700.1"; exon_number "2"; scaffold_29252 StringTie exon 690 900 1000 + . gene_id "MSTRG.62700"; transcript_id "MSTRG.62700.1"; exon_number "3"; scaffold_2926 StringTie exon 37576 37817 1000 . . gene_id "MSTRG.62710"; transcript_id "MSTRG.62710.1"; exon_number "1"; scaffold_29262 StringTie exon 2696 2905 1000 . . gene_id "MSTRG.62713"; transcript_id "MSTRG.62713.1"; exon_number "1"; scaffold_29266 StringTie exon 4007 4289 1000 . . gene_id "MSTRG.62717"; transcript_id "MSTRG.62717.1"; exon_number "1"; scaffold_2928 StringTie exon 73552 73832 1000 . . gene_id "MSTRG.62731"; transcript_id "MSTRG.62731.1"; exon_number "1"; scaffold_293 StringTie exon 440933 441131 1000 - . gene_id "MSTRG.62776"; transcript_id "MSTRG.62776.1"; exon_number "1"; scaffold_293 StringTie exon 441270 441386 1000 - . gene_id "MSTRG.62776"; transcript_id "MSTRG.62776.1"; exon_number "2"; scaffold_293 StringTie exon 539566 539919 1000 . . gene_id "MSTRG.62793"; transcript_id "MSTRG.62793.1"; exon_number "1"; scaffold_293 StringTie exon 715682 716365 1000 . . gene_id "MSTRG.62806"; transcript_id "MSTRG.62806.1"; exon_number "1"; scaffold_293 StringTie exon 929934 930208 1000 . . gene_id "MSTRG.62816"; transcript_id "MSTRG.62816.1"; exon_number "1"; scaffold_293 StringTie exon 939051 939702 1000 . . gene_id "MSTRG.62817"; transcript_id "MSTRG.62817.1"; exon_number "1"; scaffold_29302 StringTie exon 566 846 1000 . . gene_id "MSTRG.62829"; transcript_id "MSTRG.62829.1"; exon_number "1"; scaffold_2931 StringTie exon 16657 16841 1000 + . gene_id "MSTRG.62834"; transcript_id "MSTRG.62834.1"; exon_number "1"; scaffold_2931 StringTie exon 73621 73746 1000 + . gene_id "MSTRG.62834"; transcript_id "MSTRG.62834.1"; exon_number "2"; scaffold_29320 StringTie exon 1759 1975 1000 . . gene_id "MSTRG.62848"; transcript_id "MSTRG.62848.1"; exon_number "1"; scaffold_29341 StringTie exon 831 1135 1000 . . gene_id "MSTRG.62862"; transcript_id "MSTRG.62862.1"; exon_number "1"; scaffold_2936 StringTie exon 49121 49231 1000 + . gene_id "MSTRG.62894"; transcript_id "MSTRG.62894.1"; exon_number "1"; scaffold_2936 StringTie exon 49549 49646 1000 + . gene_id "MSTRG.62894"; transcript_id "MSTRG.62894.1"; exon_number "2"; scaffold_2936 StringTie exon 51590 51672 1000 + . gene_id "MSTRG.62894"; transcript_id "MSTRG.62894.1"; exon_number "3"; scaffold_2939 StringTie exon 15434 15657 1000 . . gene_id "MSTRG.62934"; transcript_id "MSTRG.62934.1"; exon_number "1"; scaffold_294 StringTie exon 101505 101741 1000 . . gene_id "MSTRG.62954"; transcript_id "MSTRG.62954.1"; exon_number "1"; scaffold_294 StringTie exon 117351 117591 1000 . . gene_id "MSTRG.62955"; transcript_id "MSTRG.62955.1"; exon_number "1"; scaffold_294 StringTie exon 126128 126752 1000 . . gene_id "MSTRG.62956"; transcript_id "MSTRG.62956.1"; exon_number "1"; scaffold_294 StringTie exon 186684 186944 1000 . . gene_id "MSTRG.62959"; transcript_id "MSTRG.62959.1"; exon_number "1"; scaffold_294 StringTie exon 500168 500371 1000 . . gene_id "MSTRG.62970"; transcript_id "MSTRG.62970.1"; exon_number "1"; scaffold_294 StringTie exon 757541 757777 1000 . . gene_id "MSTRG.62983"; transcript_id "MSTRG.62983.1"; exon_number "1"; scaffold_29405 StringTie exon 1967 2196 1000 . . gene_id "MSTRG.63001"; transcript_id "MSTRG.63001.1"; exon_number "1"; scaffold_2945 StringTie exon 38843 39159 1000 . . gene_id "MSTRG.63034"; transcript_id "MSTRG.63034.1"; exon_number "1"; scaffold_2946 StringTie exon 1971 2165 1000 + . gene_id "MSTRG.63042"; transcript_id "MSTRG.63042.1"; exon_number "1"; scaffold_2946 StringTie exon 15099 15259 1000 + . gene_id "MSTRG.63042"; transcript_id "MSTRG.63042.1"; exon_number "2"; scaffold_2946 StringTie exon 27275 27411 1000 + . gene_id "MSTRG.63042"; transcript_id "MSTRG.63042.1"; exon_number "3"; scaffold_2946 StringTie exon 31526 31748 1000 + . gene_id "MSTRG.63042"; transcript_id "MSTRG.63042.1"; exon_number "4"; scaffold_2946 StringTie exon 37426 37537 1000 + . gene_id "MSTRG.63042"; transcript_id "MSTRG.63042.1"; exon_number "5"; scaffold_2946 StringTie exon 44026 44822 1000 + . gene_id "MSTRG.63042"; transcript_id "MSTRG.63042.1"; exon_number "6"; scaffold_29461 StringTie exon 2085 2178 1000 + . gene_id "MSTRG.63046"; transcript_id "MSTRG.63046.1"; exon_number "1"; scaffold_29461 StringTie exon 3270 3412 1000 + . gene_id "MSTRG.63046"; transcript_id "MSTRG.63046.1"; exon_number "2"; scaffold_29478 StringTie exon 2304 2806 1000 + . gene_id "MSTRG.63055"; transcript_id "MSTRG.63055.1"; exon_number "1"; scaffold_29482 StringTie exon 2154 2518 1000 . . gene_id "MSTRG.63068"; transcript_id "MSTRG.63068.1"; exon_number "1"; scaffold_295 StringTie exon 326695 326948 1000 . . gene_id "MSTRG.63104"; transcript_id "MSTRG.63104.1"; exon_number "1"; scaffold_295 StringTie exon 481589 481744 1000 + . gene_id "MSTRG.63124"; transcript_id "MSTRG.63124.1"; exon_number "1"; scaffold_295 StringTie exon 484423 484482 1000 + . gene_id "MSTRG.63124"; transcript_id "MSTRG.63124.1"; exon_number "2"; scaffold_295 StringTie exon 865556 865831 1000 . . gene_id "MSTRG.63151"; transcript_id "MSTRG.63151.1"; exon_number "1"; scaffold_295 StringTie exon 868710 868911 1000 . . gene_id "MSTRG.63152"; transcript_id "MSTRG.63152.1"; exon_number "1"; scaffold_29518 StringTie exon 73 453 1000 . . gene_id "MSTRG.63182"; transcript_id "MSTRG.63182.1"; exon_number "1"; scaffold_2953 StringTie exon 74309 76214 1000 . . gene_id "MSTRG.63209"; transcript_id "MSTRG.63209.1"; exon_number "1"; scaffold_2957 StringTie exon 62385 62690 1000 - . gene_id "MSTRG.63249"; transcript_id "MSTRG.63249.1"; exon_number "1"; scaffold_2957 StringTie exon 64741 64875 1000 - . gene_id "MSTRG.63249"; transcript_id "MSTRG.63249.1"; exon_number "2"; scaffold_29570 StringTie exon 1612 1834 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "1"; scaffold_29570 StringTie exon 1946 1956 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "2"; scaffold_29570 StringTie exon 2217 2238 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "3"; scaffold_29570 StringTie exon 2694 2751 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "4"; scaffold_29570 StringTie exon 3147 3263 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "5"; scaffold_29570 StringTie exon 3371 3448 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "6"; scaffold_29570 StringTie exon 3689 3802 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "7"; scaffold_29570 StringTie exon 3967 4079 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "8"; scaffold_29570 StringTie exon 4290 4369 1000 + . gene_id "MSTRG.63251"; transcript_id "MSTRG.63251.1"; exon_number "9"; scaffold_29576 StringTie exon 3652 3871 1000 . . gene_id "MSTRG.63255"; transcript_id "MSTRG.63255.1"; exon_number "1"; scaffold_2958 StringTie exon 69573 69898 1000 . . gene_id "MSTRG.63268"; transcript_id "MSTRG.63268.1"; exon_number "1"; scaffold_296 StringTie exon 52146 52446 1000 . . gene_id "MSTRG.63282"; transcript_id "MSTRG.63282.1"; exon_number "1"; scaffold_296 StringTie exon 72727 73026 1000 . . gene_id "MSTRG.63287"; transcript_id "MSTRG.63287.1"; exon_number "1"; scaffold_296 StringTie exon 771867 772099 1000 . . gene_id "MSTRG.63323"; transcript_id "MSTRG.63323.1"; exon_number "1"; scaffold_296 StringTie exon 1024611 1024830 1000 . . gene_id "MSTRG.63335"; transcript_id "MSTRG.63335.1"; exon_number "1"; scaffold_2961 StringTie exon 7196 7503 1000 . . gene_id "MSTRG.63344"; transcript_id "MSTRG.63344.1"; exon_number "1"; scaffold_2962 StringTie exon 37642 37845 1000 . . gene_id "MSTRG.63359"; transcript_id "MSTRG.63359.1"; exon_number "1"; scaffold_2964 StringTie exon 1061 1401 1000 . . gene_id "MSTRG.63372"; transcript_id "MSTRG.63372.1"; exon_number "1"; scaffold_2964 StringTie exon 5852 6272 1000 . . gene_id "MSTRG.63373"; transcript_id "MSTRG.63373.1"; exon_number "1"; scaffold_2965 StringTie exon 42448 42659 1000 . . gene_id "MSTRG.63388"; transcript_id "MSTRG.63388.1"; exon_number "1"; scaffold_2968 StringTie exon 8842 9082 1000 . . gene_id "MSTRG.63412"; transcript_id "MSTRG.63412.1"; exon_number "1"; scaffold_2969 StringTie exon 11 380 1000 . . gene_id "MSTRG.63418"; transcript_id "MSTRG.63418.1"; exon_number "1"; scaffold_297 StringTie exon 99540 99798 1000 . . gene_id "MSTRG.63432"; transcript_id "MSTRG.63432.1"; exon_number "1"; scaffold_297 StringTie exon 462654 462939 1000 . . gene_id "MSTRG.63447"; transcript_id "MSTRG.63447.1"; exon_number "1"; scaffold_297 StringTie exon 520249 520473 1000 . . gene_id "MSTRG.63451"; transcript_id "MSTRG.63451.1"; exon_number "1"; scaffold_297 StringTie exon 534541 534743 1000 . . gene_id "MSTRG.63452"; transcript_id "MSTRG.63452.1"; exon_number "1"; scaffold_297 StringTie exon 775543 776213 1000 . . gene_id "MSTRG.63460"; transcript_id "MSTRG.63460.1"; exon_number "1"; scaffold_297 StringTie exon 991618 992431 1000 . . gene_id "MSTRG.63473"; transcript_id "MSTRG.63473.1"; exon_number "1"; scaffold_2970 StringTie exon 64655 66418 1000 . . gene_id "MSTRG.63479"; transcript_id "MSTRG.63479.1"; exon_number "1"; scaffold_2970 StringTie exon 75663 75984 1000 . . gene_id "MSTRG.63480"; transcript_id "MSTRG.63480.1"; exon_number "1"; scaffold_29746 StringTie exon 3789 4312 1000 . . gene_id "MSTRG.63521"; transcript_id "MSTRG.63521.1"; exon_number "1"; scaffold_2977 StringTie exon 11380 12149 1000 . . gene_id "MSTRG.63544"; transcript_id "MSTRG.63544.1"; exon_number "1"; scaffold_298 StringTie exon 62010 62094 1000 + . gene_id "MSTRG.63581"; transcript_id "MSTRG.63581.1"; exon_number "1"; scaffold_298 StringTie exon 62710 62802 1000 + . gene_id "MSTRG.63581"; transcript_id "MSTRG.63581.1"; exon_number "2"; scaffold_298 StringTie exon 62887 63042 1000 + . gene_id "MSTRG.63581"; transcript_id "MSTRG.63581.1"; exon_number "3"; scaffold_298 StringTie exon 63185 65080 1000 + . gene_id "MSTRG.63581"; transcript_id "MSTRG.63581.1"; exon_number "4"; scaffold_298 StringTie exon 92963 93220 1000 . . gene_id "MSTRG.63584"; transcript_id "MSTRG.63584.1"; exon_number "1"; scaffold_298 StringTie exon 130732 131044 1000 . . gene_id "MSTRG.63587"; transcript_id "MSTRG.63587.1"; exon_number "1"; scaffold_298 StringTie exon 156946 157091 1000 - . gene_id "MSTRG.63598"; transcript_id "MSTRG.63598.1"; exon_number "1"; scaffold_298 StringTie exon 158770 158854 1000 - . gene_id "MSTRG.63598"; transcript_id "MSTRG.63598.1"; exon_number "2"; scaffold_298 StringTie exon 160591 160695 1000 - . gene_id "MSTRG.63598"; transcript_id "MSTRG.63598.1"; exon_number "3"; scaffold_298 StringTie exon 161769 161863 1000 - . gene_id "MSTRG.63598"; transcript_id "MSTRG.63598.1"; exon_number "4"; scaffold_298 StringTie exon 162064 162196 1000 - . gene_id "MSTRG.63598"; transcript_id "MSTRG.63598.1"; exon_number "5"; scaffold_298 StringTie exon 163988 164151 1000 - . gene_id "MSTRG.63598"; transcript_id "MSTRG.63598.1"; exon_number "6"; scaffold_298 StringTie exon 165124 165140 1000 - . gene_id "MSTRG.63598"; transcript_id "MSTRG.63598.1"; exon_number "7"; scaffold_298 StringTie exon 311446 312154 1000 - . gene_id "MSTRG.63609"; transcript_id "MSTRG.63609.1"; exon_number "1"; scaffold_298 StringTie exon 312269 312558 1000 - . gene_id "MSTRG.63610"; transcript_id "MSTRG.63610.1"; exon_number "1"; scaffold_298 StringTie exon 312824 312950 1000 - . gene_id "MSTRG.63610"; transcript_id "MSTRG.63610.1"; exon_number "2"; scaffold_298 StringTie exon 402956 403312 1000 . . gene_id "MSTRG.63622"; transcript_id "MSTRG.63622.1"; exon_number "1"; scaffold_298 StringTie exon 415968 416454 1000 . . gene_id "MSTRG.63623"; transcript_id "MSTRG.63623.1"; exon_number "1"; scaffold_298 StringTie exon 580846 580866 1000 - . gene_id "MSTRG.63633"; transcript_id "MSTRG.63633.1"; exon_number "1"; scaffold_298 StringTie exon 581036 581174 1000 - . gene_id "MSTRG.63633"; transcript_id "MSTRG.63633.1"; exon_number "2"; scaffold_298 StringTie exon 583583 583657 1000 - . gene_id "MSTRG.63633"; transcript_id "MSTRG.63633.1"; exon_number "3"; scaffold_298 StringTie exon 583813 583930 1000 - . gene_id "MSTRG.63633"; transcript_id "MSTRG.63633.1"; exon_number "4"; scaffold_298 StringTie exon 584035 584147 1000 - . gene_id "MSTRG.63633"; transcript_id "MSTRG.63633.1"; exon_number "5"; scaffold_298 StringTie exon 584843 584963 1000 - . gene_id "MSTRG.63633"; transcript_id "MSTRG.63633.1"; exon_number "6"; scaffold_298 StringTie exon 919945 920233 1000 . . gene_id "MSTRG.63652"; transcript_id "MSTRG.63652.1"; exon_number "1"; scaffold_298 StringTie exon 942009 942220 1000 + . gene_id "MSTRG.63655"; transcript_id "MSTRG.63655.1"; exon_number "1"; scaffold_298 StringTie exon 945787 945922 1000 + . gene_id "MSTRG.63655"; transcript_id "MSTRG.63655.1"; exon_number "2"; scaffold_298 StringTie exon 974260 974480 1000 . . gene_id "MSTRG.63660"; transcript_id "MSTRG.63660.1"; exon_number "1"; scaffold_2982 StringTie exon 18229 20250 1000 . . gene_id "MSTRG.63693"; transcript_id "MSTRG.63693.1"; exon_number "1"; scaffold_2982 StringTie exon 24177 24279 1000 - . gene_id "MSTRG.63694"; transcript_id "MSTRG.63694.1"; exon_number "1"; scaffold_2982 StringTie exon 24440 24573 1000 - . gene_id "MSTRG.63694"; transcript_id "MSTRG.63694.1"; exon_number "2"; scaffold_2982 StringTie exon 25039 25078 1000 - . gene_id "MSTRG.63694"; transcript_id "MSTRG.63694.1"; exon_number "3"; scaffold_29831 StringTie exon 2353 2750 1000 . . gene_id "MSTRG.63710"; transcript_id "MSTRG.63710.1"; exon_number "1"; scaffold_29849 StringTie exon 214 430 1000 . . gene_id "MSTRG.63721"; transcript_id "MSTRG.63721.1"; exon_number "1"; scaffold_29857 StringTie exon 2943 3076 1000 + . gene_id "MSTRG.63742"; transcript_id "MSTRG.63742.1"; exon_number "1"; scaffold_29857 StringTie exon 3803 3925 1000 + . gene_id "MSTRG.63742"; transcript_id "MSTRG.63742.1"; exon_number "2"; scaffold_29857 StringTie exon 4029 4132 1000 + . gene_id "MSTRG.63742"; transcript_id "MSTRG.63742.1"; exon_number "3"; scaffold_2986 StringTie exon 17756 18015 1000 . . gene_id "MSTRG.63744"; transcript_id "MSTRG.63744.1"; exon_number "1"; scaffold_2986 StringTie exon 74271 74511 1000 . . gene_id "MSTRG.63749"; transcript_id "MSTRG.63749.1"; exon_number "1"; scaffold_299 StringTie exon 241873 242121 1000 . . gene_id "MSTRG.63792"; transcript_id "MSTRG.63792.1"; exon_number "1"; scaffold_299 StringTie exon 280377 280640 1000 . . gene_id "MSTRG.63796"; transcript_id "MSTRG.63796.1"; exon_number "1"; scaffold_299 StringTie exon 982447 982504 1000 + . gene_id "MSTRG.63838"; transcript_id "MSTRG.63838.1"; exon_number "1"; scaffold_299 StringTie exon 982751 982904 1000 + . gene_id "MSTRG.63838"; transcript_id "MSTRG.63838.1"; exon_number "2"; scaffold_299 StringTie exon 984280 984324 1000 + . gene_id "MSTRG.63838"; transcript_id "MSTRG.63838.1"; exon_number "3"; scaffold_2990 StringTie exon 68157 68813 1000 . . gene_id "MSTRG.63846"; transcript_id "MSTRG.63846.1"; exon_number "1"; scaffold_2991 StringTie exon 33032 33158 1000 - . gene_id "MSTRG.63853"; transcript_id "MSTRG.63853.1"; exon_number "1"; scaffold_2991 StringTie exon 36299 36412 1000 - . gene_id "MSTRG.63853"; transcript_id "MSTRG.63853.1"; exon_number "2"; scaffold_2991 StringTie exon 47061 47177 1000 - . gene_id "MSTRG.63853"; transcript_id "MSTRG.63853.1"; exon_number "3"; scaffold_2991 StringTie exon 66296 67074 1000 - . gene_id "MSTRG.63853"; transcript_id "MSTRG.63853.1"; exon_number "4"; scaffold_2993 StringTie exon 26653 26816 1000 - . gene_id "MSTRG.63870"; transcript_id "MSTRG.63870.1"; exon_number "1"; scaffold_2993 StringTie exon 26926 27093 1000 - . gene_id "MSTRG.63870"; transcript_id "MSTRG.63870.1"; exon_number "2"; scaffold_2993 StringTie exon 37274 37462 1000 - . gene_id "MSTRG.63870"; transcript_id "MSTRG.63870.1"; exon_number "3"; scaffold_2993 StringTie exon 38031 38408 1000 - . gene_id "MSTRG.63870"; transcript_id "MSTRG.63870.1"; exon_number "4"; scaffold_29930 StringTie exon 775 1083 1000 . . gene_id "MSTRG.63879"; transcript_id "MSTRG.63879.1"; exon_number "1"; scaffold_3 StringTie exon 278051 278280 1000 . . gene_id "MSTRG.63938"; transcript_id "MSTRG.63938.1"; exon_number "1"; scaffold_3 StringTie exon 554878 555640 1000 . . gene_id "MSTRG.63950"; transcript_id "MSTRG.63950.1"; exon_number "1"; scaffold_3 StringTie exon 642239 642293 1000 + . gene_id "MSTRG.63957"; transcript_id "MSTRG.63957.2"; exon_number "1"; scaffold_3 StringTie exon 642491 642710 1000 + . gene_id "MSTRG.63957"; transcript_id "MSTRG.63957.2"; exon_number "2"; scaffold_3 StringTie exon 741605 741874 1000 + . gene_id "MSTRG.63968"; transcript_id "MSTRG.63968.1"; exon_number "1"; scaffold_3 StringTie exon 742457 742609 1000 + . gene_id "MSTRG.63968"; transcript_id "MSTRG.63968.1"; exon_number "2"; scaffold_3 StringTie exon 759078 759212 1000 + . gene_id "MSTRG.63968"; transcript_id "MSTRG.63968.1"; exon_number "3"; scaffold_3 StringTie exon 762933 763042 1000 + . gene_id "MSTRG.63968"; transcript_id "MSTRG.63968.1"; exon_number "4"; scaffold_3 StringTie exon 1368152 1368430 1000 . . gene_id "MSTRG.64020"; transcript_id "MSTRG.64020.1"; exon_number "1"; scaffold_3 StringTie exon 1459963 1460130 1000 + . gene_id "MSTRG.64030"; transcript_id "MSTRG.64030.1"; exon_number "1"; scaffold_3 StringTie exon 1461037 1461112 1000 + . gene_id "MSTRG.64030"; transcript_id "MSTRG.64030.1"; exon_number "2"; scaffold_3 StringTie exon 1492359 1492903 1000 . . gene_id "MSTRG.64038"; transcript_id "MSTRG.64038.1"; exon_number "1"; scaffold_3 StringTie exon 1512634 1512700 1000 + . gene_id "MSTRG.64042"; transcript_id "MSTRG.64042.1"; exon_number "1"; scaffold_3 StringTie exon 1512810 1512880 1000 + . gene_id "MSTRG.64042"; transcript_id "MSTRG.64042.1"; exon_number "2"; scaffold_3 StringTie exon 1520122 1520292 1000 + . gene_id "MSTRG.64042"; transcript_id "MSTRG.64042.1"; exon_number "3"; scaffold_3 StringTie exon 1520529 1520649 1000 + . gene_id "MSTRG.64042"; transcript_id "MSTRG.64042.1"; exon_number "4"; scaffold_3 StringTie exon 1525154 1525262 1000 + . gene_id "MSTRG.64042"; transcript_id "MSTRG.64042.1"; exon_number "5"; scaffold_3 StringTie exon 1903078 1903220 1000 + . gene_id "MSTRG.64085"; transcript_id "MSTRG.64085.1"; exon_number "1"; scaffold_3 StringTie exon 1903901 1904000 1000 + . gene_id "MSTRG.64085"; transcript_id "MSTRG.64085.1"; exon_number "2"; scaffold_3 StringTie exon 1906015 1906127 1000 + . gene_id "MSTRG.64085"; transcript_id "MSTRG.64085.1"; exon_number "3"; scaffold_3 StringTie exon 1906232 1906379 1000 + . gene_id "MSTRG.64085"; transcript_id "MSTRG.64085.1"; exon_number "4"; scaffold_3 StringTie exon 1906536 1906586 1000 + . gene_id "MSTRG.64085"; transcript_id "MSTRG.64085.1"; exon_number "5"; scaffold_3 StringTie exon 1921785 1921845 1000 - . gene_id "MSTRG.64089"; transcript_id "MSTRG.64089.1"; exon_number "1"; scaffold_3 StringTie exon 1923245 1923377 1000 - . gene_id "MSTRG.64089"; transcript_id "MSTRG.64089.1"; exon_number "2"; scaffold_3 StringTie exon 1923517 1923671 1000 - . gene_id "MSTRG.64089"; transcript_id "MSTRG.64089.1"; exon_number "3"; scaffold_3 StringTie exon 1925300 1925501 1000 - . gene_id "MSTRG.64089"; transcript_id "MSTRG.64089.1"; exon_number "4"; scaffold_3 StringTie exon 1926133 1926166 1000 - . gene_id "MSTRG.64089"; transcript_id "MSTRG.64089.1"; exon_number "5"; scaffold_3 StringTie exon 2055528 2056360 1000 . . gene_id "MSTRG.64102"; transcript_id "MSTRG.64102.1"; exon_number "1"; scaffold_3 StringTie exon 2397646 2397945 1000 . . gene_id "MSTRG.64129"; transcript_id "MSTRG.64129.1"; exon_number "1"; scaffold_3 StringTie exon 2406716 2406843 1000 - . gene_id "MSTRG.64132"; transcript_id "MSTRG.64132.1"; exon_number "1"; scaffold_3 StringTie exon 2407031 2407184 1000 - . gene_id "MSTRG.64132"; transcript_id "MSTRG.64132.1"; exon_number "2"; scaffold_3 StringTie exon 2407351 2407360 1000 - . gene_id "MSTRG.64134"; transcript_id "MSTRG.64134.1"; exon_number "1"; scaffold_3 StringTie exon 2407558 2407797 1000 - . gene_id "MSTRG.64134"; transcript_id "MSTRG.64134.1"; exon_number "2"; scaffold_3 StringTie exon 2595009 2595604 1000 . . gene_id "MSTRG.64148"; transcript_id "MSTRG.64148.1"; exon_number "1"; scaffold_3 StringTie exon 2751155 2751273 1000 - . gene_id "MSTRG.64163"; transcript_id "MSTRG.64163.1"; exon_number "1"; scaffold_3 StringTie exon 2757497 2757560 1000 - . gene_id "MSTRG.64163"; transcript_id "MSTRG.64163.1"; exon_number "2"; scaffold_3 StringTie exon 2766745 2767082 1000 - . gene_id "MSTRG.64163"; transcript_id "MSTRG.64163.1"; exon_number "3"; scaffold_3 StringTie exon 2872751 2873009 1000 . . gene_id "MSTRG.64172"; transcript_id "MSTRG.64172.1"; exon_number "1"; scaffold_3 StringTie exon 2902625 2902841 1000 . . gene_id "MSTRG.64175"; transcript_id "MSTRG.64175.1"; exon_number "1"; scaffold_3 StringTie exon 2957589 2958211 1000 . . gene_id "MSTRG.64184"; transcript_id "MSTRG.64184.1"; exon_number "1"; scaffold_3 StringTie exon 3115132 3115237 1000 - . gene_id "MSTRG.64198"; transcript_id "MSTRG.64198.1"; exon_number "1"; scaffold_3 StringTie exon 3126295 3126345 1000 - . gene_id "MSTRG.64198"; transcript_id "MSTRG.64198.1"; exon_number "2"; scaffold_3 StringTie exon 3126851 3127000 1000 - . gene_id "MSTRG.64198"; transcript_id "MSTRG.64198.1"; exon_number "3"; scaffold_3 StringTie exon 3169123 3169354 1000 . . gene_id "MSTRG.64206"; transcript_id "MSTRG.64206.1"; exon_number "1"; scaffold_3 StringTie exon 3227957 3228181 1000 . . gene_id "MSTRG.64221"; transcript_id "MSTRG.64221.1"; exon_number "1"; scaffold_3 StringTie exon 3266918 3266968 1000 + . gene_id "MSTRG.64224"; transcript_id "MSTRG.64224.1"; exon_number "1"; scaffold_3 StringTie exon 3267231 3267393 1000 + . gene_id "MSTRG.64224"; transcript_id "MSTRG.64224.1"; exon_number "2"; scaffold_3 StringTie exon 3267666 3267810 1000 + . gene_id "MSTRG.64224"; transcript_id "MSTRG.64224.1"; exon_number "3"; scaffold_3 StringTie exon 3267928 3268333 1000 + . gene_id "MSTRG.64224"; transcript_id "MSTRG.64224.1"; exon_number "4"; scaffold_3 StringTie exon 3592981 3593386 1000 . . gene_id "MSTRG.64254"; transcript_id "MSTRG.64254.1"; exon_number "1"; scaffold_30 StringTie exon 24057 24139 1000 - . gene_id "MSTRG.64279"; transcript_id "MSTRG.64279.1"; exon_number "1"; scaffold_30 StringTie exon 28572 28988 1000 - . gene_id "MSTRG.64279"; transcript_id "MSTRG.64279.1"; exon_number "2"; scaffold_30 StringTie exon 30618 30705 1000 - . gene_id "MSTRG.64279"; transcript_id "MSTRG.64279.1"; exon_number "3"; scaffold_30 StringTie exon 55721 55864 1000 - . gene_id "MSTRG.64279"; transcript_id "MSTRG.64279.1"; exon_number "4"; scaffold_30 StringTie exon 67673 67789 1000 - . gene_id "MSTRG.64279"; transcript_id "MSTRG.64279.1"; exon_number "5"; scaffold_30 StringTie exon 81845 81987 1000 - . gene_id "MSTRG.64279"; transcript_id "MSTRG.64279.1"; exon_number "6"; scaffold_30 StringTie exon 104436 104920 1000 - . gene_id "MSTRG.64279"; transcript_id "MSTRG.64279.1"; exon_number "7"; scaffold_30 StringTie exon 983971 984062 1000 - . gene_id "MSTRG.64310"; transcript_id "MSTRG.64310.1"; exon_number "1"; scaffold_30 StringTie exon 984177 984284 1000 - . gene_id "MSTRG.64310"; transcript_id "MSTRG.64310.1"; exon_number "2"; scaffold_30 StringTie exon 984388 984506 1000 - . gene_id "MSTRG.64310"; transcript_id "MSTRG.64310.1"; exon_number "3"; scaffold_30 StringTie exon 985103 985260 1000 - . gene_id "MSTRG.64310"; transcript_id "MSTRG.64310.1"; exon_number "4"; scaffold_30 StringTie exon 988048 988236 1000 - . gene_id "MSTRG.64310"; transcript_id "MSTRG.64310.1"; exon_number "5"; scaffold_30 StringTie exon 1385291 1385490 1000 . . gene_id "MSTRG.64339"; transcript_id "MSTRG.64339.1"; exon_number "1"; scaffold_30 StringTie exon 1955545 1955854 1000 . . gene_id "MSTRG.64370"; transcript_id "MSTRG.64370.1"; exon_number "1"; scaffold_300 StringTie exon 602522 602916 1000 . . gene_id "MSTRG.64423"; transcript_id "MSTRG.64423.1"; exon_number "1"; scaffold_300 StringTie exon 605087 605190 1000 + . gene_id "MSTRG.64424"; transcript_id "MSTRG.64424.1"; exon_number "1"; scaffold_300 StringTie exon 607658 607789 1000 + . gene_id "MSTRG.64424"; transcript_id "MSTRG.64424.1"; exon_number "2"; scaffold_300 StringTie exon 608118 608178 1000 + . gene_id "MSTRG.64424"; transcript_id "MSTRG.64424.1"; exon_number "3"; scaffold_300 StringTie exon 767477 767738 1000 . . gene_id "MSTRG.64436"; transcript_id "MSTRG.64436.1"; exon_number "1"; scaffold_300 StringTie exon 854756 854991 1000 + . gene_id "MSTRG.64447"; transcript_id "MSTRG.64447.1"; exon_number "1"; scaffold_300 StringTie exon 855216 855253 1000 + . gene_id "MSTRG.64447"; transcript_id "MSTRG.64447.1"; exon_number "2"; scaffold_300 StringTie exon 965014 965454 1000 . . gene_id "MSTRG.64464"; transcript_id "MSTRG.64464.1"; exon_number "1"; scaffold_3000 StringTie exon 24345 24390 1000 - . gene_id "MSTRG.64472"; transcript_id "MSTRG.64472.1"; exon_number "1"; scaffold_3000 StringTie exon 24648 24869 1000 - . gene_id "MSTRG.64472"; transcript_id "MSTRG.64472.1"; exon_number "2"; scaffold_3000 StringTie exon 25356 25502 1000 - . gene_id "MSTRG.64472"; transcript_id "MSTRG.64472.1"; exon_number "3"; scaffold_3000 StringTie exon 25673 25735 1000 - . gene_id "MSTRG.64472"; transcript_id "MSTRG.64472.1"; exon_number "4"; scaffold_30023 StringTie exon 2416 2719 1000 . . gene_id "MSTRG.64495"; transcript_id "MSTRG.64495.1"; exon_number "1"; scaffold_3004 StringTie exon 60485 60687 1000 . . gene_id "MSTRG.64504"; transcript_id "MSTRG.64504.1"; exon_number "1"; scaffold_3004 StringTie exon 63418 63698 1000 . . gene_id "MSTRG.64505"; transcript_id "MSTRG.64505.1"; exon_number "1"; scaffold_3005 StringTie exon 41864 43687 1000 . . gene_id "MSTRG.64512"; transcript_id "MSTRG.64512.1"; exon_number "1"; scaffold_301 StringTie exon 96952 97166 1000 . . gene_id "MSTRG.64578"; transcript_id "MSTRG.64578.1"; exon_number "1"; scaffold_301 StringTie exon 511151 511458 1000 . . gene_id "MSTRG.64608"; transcript_id "MSTRG.64608.1"; exon_number "1"; scaffold_301 StringTie exon 686949 687329 1000 . . gene_id "MSTRG.64615"; transcript_id "MSTRG.64615.1"; exon_number "1"; scaffold_301 StringTie exon 856872 857096 1000 . . gene_id "MSTRG.64622"; transcript_id "MSTRG.64622.1"; exon_number "1"; scaffold_301 StringTie exon 938108 938375 1000 . . gene_id "MSTRG.64629"; transcript_id "MSTRG.64629.1"; exon_number "1"; scaffold_3010 StringTie exon 37450 37746 1000 . . gene_id "MSTRG.64634"; transcript_id "MSTRG.64634.1"; exon_number "1"; scaffold_30102 StringTie exon 10 446 1000 . . gene_id "MSTRG.64639"; transcript_id "MSTRG.64639.1"; exon_number "1"; scaffold_3011 StringTie exon 74470 74693 1000 . . gene_id "MSTRG.64646"; transcript_id "MSTRG.64646.1"; exon_number "1"; scaffold_30118 StringTie exon 1399 1886 1000 . . gene_id "MSTRG.64650"; transcript_id "MSTRG.64650.1"; exon_number "1"; scaffold_3015 StringTie exon 88 371 1000 . . gene_id "MSTRG.64678"; transcript_id "MSTRG.64678.1"; exon_number "1"; scaffold_30152 StringTie exon 1612 2121 1000 . . gene_id "MSTRG.64687"; transcript_id "MSTRG.64687.1"; exon_number "1"; scaffold_3018 StringTie exon 13377 13589 1000 . . gene_id "MSTRG.64698"; transcript_id "MSTRG.64698.1"; exon_number "1"; scaffold_302 StringTie exon 455792 455864 1000 - . gene_id "MSTRG.64747"; transcript_id "MSTRG.64747.3"; exon_number "1"; scaffold_302 StringTie exon 456563 456757 1000 - . gene_id "MSTRG.64747"; transcript_id "MSTRG.64747.3"; exon_number "2"; scaffold_302 StringTie exon 496297 496975 1000 . . gene_id "MSTRG.64750"; transcript_id "MSTRG.64750.1"; exon_number "1"; scaffold_302 StringTie exon 525672 525776 1000 + . gene_id "MSTRG.64757"; transcript_id "MSTRG.64757.1"; exon_number "1"; scaffold_302 StringTie exon 526108 526269 1000 + . gene_id "MSTRG.64757"; transcript_id "MSTRG.64757.1"; exon_number "2"; scaffold_302 StringTie exon 570609 570825 1000 + . gene_id "MSTRG.64761"; transcript_id "MSTRG.64761.1"; exon_number "1"; scaffold_302 StringTie exon 570936 571039 1000 + . gene_id "MSTRG.64761"; transcript_id "MSTRG.64761.1"; exon_number "2"; scaffold_302 StringTie exon 571288 571362 1000 + . gene_id "MSTRG.64761"; transcript_id "MSTRG.64761.1"; exon_number "3"; scaffold_302 StringTie exon 572796 572994 1000 + . gene_id "MSTRG.64762"; transcript_id "MSTRG.64762.1"; exon_number "1"; scaffold_302 StringTie exon 573192 573278 1000 + . gene_id "MSTRG.64762"; transcript_id "MSTRG.64762.1"; exon_number "2"; scaffold_302 StringTie exon 573378 573410 1000 + . gene_id "MSTRG.64762"; transcript_id "MSTRG.64762.1"; exon_number "3"; scaffold_302 StringTie exon 573522 573581 1000 + . gene_id "MSTRG.64762"; transcript_id "MSTRG.64762.1"; exon_number "4"; scaffold_302 StringTie exon 642023 642046 1000 + . gene_id "MSTRG.64777"; transcript_id "MSTRG.64777.1"; exon_number "1"; scaffold_302 StringTie exon 642204 642380 1000 + . gene_id "MSTRG.64777"; transcript_id "MSTRG.64777.1"; exon_number "2"; scaffold_302 StringTie exon 734017 734407 1000 + . gene_id "MSTRG.64784"; transcript_id "MSTRG.64784.1"; exon_number "1"; scaffold_302 StringTie exon 952403 952775 1000 . . gene_id "MSTRG.64808"; transcript_id "MSTRG.64808.1"; exon_number "1"; scaffold_302 StringTie exon 977466 977762 1000 . . gene_id "MSTRG.64810"; transcript_id "MSTRG.64810.1"; exon_number "1"; scaffold_3021 StringTie exon 2693 3078 1000 . . gene_id "MSTRG.64819"; transcript_id "MSTRG.64819.1"; exon_number "1"; scaffold_3021 StringTie exon 38817 41658 1000 - . gene_id "MSTRG.64823"; transcript_id "MSTRG.64823.1"; exon_number "1"; scaffold_30238 StringTie exon 1025 1117 1000 - . gene_id "MSTRG.64844"; transcript_id "MSTRG.64844.1"; exon_number "1"; scaffold_30238 StringTie exon 1243 1328 1000 - . gene_id "MSTRG.64844"; transcript_id "MSTRG.64844.1"; exon_number "2"; scaffold_30238 StringTie exon 1970 2095 1000 - . gene_id "MSTRG.64844"; transcript_id "MSTRG.64844.1"; exon_number "3"; scaffold_30248 StringTie exon 2411 2688 1000 . . gene_id "MSTRG.64856"; transcript_id "MSTRG.64856.1"; exon_number "1"; scaffold_3026 StringTie exon 20511 20749 1000 . . gene_id "MSTRG.64869"; transcript_id "MSTRG.64869.1"; exon_number "1"; scaffold_30295 StringTie exon 2182 2512 1000 . . gene_id "MSTRG.64899"; transcript_id "MSTRG.64899.1"; exon_number "1"; scaffold_303 StringTie exon 25359 25409 1000 + . gene_id "MSTRG.64906"; transcript_id "MSTRG.64906.1"; exon_number "1"; scaffold_303 StringTie exon 25604 27191 1000 + . gene_id "MSTRG.64906"; transcript_id "MSTRG.64906.1"; exon_number "2"; scaffold_303 StringTie exon 116662 116887 1000 . . gene_id "MSTRG.64915"; transcript_id "MSTRG.64915.1"; exon_number "1"; scaffold_303 StringTie exon 608346 609072 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "1"; scaffold_303 StringTie exon 610130 610190 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "2"; scaffold_303 StringTie exon 610850 611042 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "3"; scaffold_303 StringTie exon 614154 614206 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "4"; scaffold_303 StringTie exon 615190 615330 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "5"; scaffold_303 StringTie exon 615670 615746 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "6"; scaffold_303 StringTie exon 615900 615943 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "7"; scaffold_303 StringTie exon 616165 616331 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "8"; scaffold_303 StringTie exon 616971 617077 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "9"; scaffold_303 StringTie exon 617362 617482 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "10"; scaffold_303 StringTie exon 617749 618769 1000 + . gene_id "MSTRG.64950"; transcript_id "MSTRG.64950.1"; exon_number "11"; scaffold_303 StringTie exon 676348 676953 1000 . . gene_id "MSTRG.64952"; transcript_id "MSTRG.64952.1"; exon_number "1"; scaffold_303 StringTie exon 735015 735470 1000 . . gene_id "MSTRG.64961"; transcript_id "MSTRG.64961.1"; exon_number "1"; scaffold_303 StringTie exon 803391 803445 1000 - . gene_id "MSTRG.64969"; transcript_id "MSTRG.64969.1"; exon_number "1"; scaffold_303 StringTie exon 803891 804016 1000 - . gene_id "MSTRG.64969"; transcript_id "MSTRG.64969.1"; exon_number "2"; scaffold_303 StringTie exon 804336 804372 1000 - . gene_id "MSTRG.64969"; transcript_id "MSTRG.64969.1"; exon_number "3"; scaffold_30325 StringTie exon 3798 3999 1000 . . gene_id "MSTRG.65004"; transcript_id "MSTRG.65004.1"; exon_number "1"; scaffold_3036 StringTie exon 45272 45485 1000 . . gene_id "MSTRG.65035"; transcript_id "MSTRG.65035.1"; exon_number "1"; scaffold_3037 StringTie exon 57482 57860 1000 . . gene_id "MSTRG.65047"; transcript_id "MSTRG.65047.1"; exon_number "1"; scaffold_30374 StringTie exon 908 1176 1000 . . gene_id "MSTRG.65051"; transcript_id "MSTRG.65051.1"; exon_number "1"; scaffold_30385 StringTie exon 2455 3113 1000 . . gene_id "MSTRG.65059"; transcript_id "MSTRG.65059.1"; exon_number "1"; scaffold_30394 StringTie exon 1038 1436 1000 . . gene_id "MSTRG.65068"; transcript_id "MSTRG.65068.1"; exon_number "1"; scaffold_304 StringTie exon 238797 241709 1000 . . gene_id "MSTRG.65082"; transcript_id "MSTRG.65082.1"; exon_number "1"; scaffold_304 StringTie exon 439741 439790 1000 + . gene_id "MSTRG.65095"; transcript_id "MSTRG.65095.1"; exon_number "1"; scaffold_304 StringTie exon 440019 440273 1000 + . gene_id "MSTRG.65095"; transcript_id "MSTRG.65095.1"; exon_number "2"; scaffold_304 StringTie exon 440451 440547 1000 + . gene_id "MSTRG.65095"; transcript_id "MSTRG.65095.1"; exon_number "3"; scaffold_304 StringTie exon 529020 529374 1000 - . gene_id "MSTRG.65105"; transcript_id "MSTRG.65105.1"; exon_number "1"; scaffold_304 StringTie exon 533491 533549 1000 - . gene_id "MSTRG.65105"; transcript_id "MSTRG.65105.1"; exon_number "2"; scaffold_304 StringTie exon 533697 533805 1000 - . gene_id "MSTRG.65105"; transcript_id "MSTRG.65105.1"; exon_number "3"; scaffold_304 StringTie exon 536352 536553 1000 - . gene_id "MSTRG.65105"; transcript_id "MSTRG.65105.1"; exon_number "4"; scaffold_304 StringTie exon 537534 537609 1000 - . gene_id "MSTRG.65105"; transcript_id "MSTRG.65105.1"; exon_number "5"; scaffold_304 StringTie exon 661878 662454 1000 . . gene_id "MSTRG.65122"; transcript_id "MSTRG.65122.1"; exon_number "1"; scaffold_304 StringTie exon 923475 923690 1000 . . gene_id "MSTRG.65139"; transcript_id "MSTRG.65139.1"; exon_number "1"; scaffold_3040 StringTie exon 56442 56723 1000 . . gene_id "MSTRG.65144"; transcript_id "MSTRG.65144.1"; exon_number "1"; scaffold_3045 StringTie exon 2671 2886 1000 . . gene_id "MSTRG.65189"; transcript_id "MSTRG.65189.1"; exon_number "1"; scaffold_3047 StringTie exon 5850 5974 1000 + . gene_id "MSTRG.65211"; transcript_id "MSTRG.65211.1"; exon_number "1"; scaffold_3047 StringTie exon 6131 6254 1000 + . gene_id "MSTRG.65211"; transcript_id "MSTRG.65211.1"; exon_number "2"; scaffold_3047 StringTie exon 6444 6692 1000 + . gene_id "MSTRG.65211"; transcript_id "MSTRG.65211.1"; exon_number "3"; scaffold_3048 StringTie exon 31622 31840 1000 . . gene_id "MSTRG.65229"; transcript_id "MSTRG.65229.1"; exon_number "1"; scaffold_3049 StringTie exon 6357 6586 1000 . . gene_id "MSTRG.65236"; transcript_id "MSTRG.65236.1"; exon_number "1"; scaffold_305 StringTie exon 195565 195966 1000 . . gene_id "MSTRG.65255"; transcript_id "MSTRG.65255.1"; exon_number "1"; scaffold_305 StringTie exon 370753 370805 1000 + . gene_id "MSTRG.65275"; transcript_id "MSTRG.65275.1"; exon_number "1"; scaffold_305 StringTie exon 379048 379238 1000 + . gene_id "MSTRG.65275"; transcript_id "MSTRG.65275.1"; exon_number "2"; scaffold_305 StringTie exon 916278 916403 1000 - . gene_id "MSTRG.65317"; transcript_id "MSTRG.65317.1"; exon_number "1"; scaffold_305 StringTie exon 916992 917156 1000 - . gene_id "MSTRG.65317"; transcript_id "MSTRG.65317.1"; exon_number "2"; scaffold_305 StringTie exon 917474 917599 1000 - . gene_id "MSTRG.65317"; transcript_id "MSTRG.65317.1"; exon_number "3"; scaffold_3050 StringTie exon 49172 49403 1000 . . gene_id "MSTRG.65327"; transcript_id "MSTRG.65327.1"; exon_number "1"; scaffold_3051 StringTie exon 26754 26895 1000 + . gene_id "MSTRG.65334"; transcript_id "MSTRG.65334.1"; exon_number "1"; scaffold_3051 StringTie exon 29902 29985 1000 + . gene_id "MSTRG.65334"; transcript_id "MSTRG.65334.1"; exon_number "2"; scaffold_30512 StringTie exon 2843 3209 1000 . . gene_id "MSTRG.65337"; transcript_id "MSTRG.65337.1"; exon_number "1"; scaffold_3054 StringTie exon 69131 69340 1000 . . gene_id "MSTRG.65370"; transcript_id "MSTRG.65370.1"; exon_number "1"; scaffold_3056 StringTie exon 46302 46458 1000 - . gene_id "MSTRG.65388"; transcript_id "MSTRG.65388.1"; exon_number "1"; scaffold_3056 StringTie exon 46669 46747 1000 - . gene_id "MSTRG.65388"; transcript_id "MSTRG.65388.1"; exon_number "2"; scaffold_3056 StringTie exon 47807 47922 1000 - . gene_id "MSTRG.65388"; transcript_id "MSTRG.65388.1"; exon_number "3"; scaffold_3056 StringTie exon 48203 48431 1000 - . gene_id "MSTRG.65388"; transcript_id "MSTRG.65388.1"; exon_number "4"; scaffold_30592 StringTie exon 1273 1463 1000 - . gene_id "MSTRG.65419"; transcript_id "MSTRG.65419.1"; exon_number "1"; scaffold_30592 StringTie exon 1626 1638 1000 - . gene_id "MSTRG.65419"; transcript_id "MSTRG.65419.1"; exon_number "2"; scaffold_306 StringTie exon 108381 108608 1000 . . gene_id "MSTRG.65428"; transcript_id "MSTRG.65428.1"; exon_number "1"; scaffold_306 StringTie exon 113831 114095 1000 . . gene_id "MSTRG.65429"; transcript_id "MSTRG.65429.1"; exon_number "1"; scaffold_306 StringTie exon 280386 280601 1000 . . gene_id "MSTRG.65438"; transcript_id "MSTRG.65438.1"; exon_number "1"; scaffold_306 StringTie exon 446660 446878 1000 . . gene_id "MSTRG.65448"; transcript_id "MSTRG.65448.1"; exon_number "1"; scaffold_306 StringTie exon 928203 928598 1000 + . gene_id "MSTRG.65486"; transcript_id "MSTRG.65486.1"; exon_number "1"; scaffold_306 StringTie exon 929023 929275 1000 + . gene_id "MSTRG.65486"; transcript_id "MSTRG.65486.1"; exon_number "2"; scaffold_306 StringTie exon 929962 930074 1000 + . gene_id "MSTRG.65486"; transcript_id "MSTRG.65486.1"; exon_number "3"; scaffold_306 StringTie exon 930606 930731 1000 + . gene_id "MSTRG.65486"; transcript_id "MSTRG.65486.1"; exon_number "4"; scaffold_306 StringTie exon 931848 933274 1000 + . gene_id "MSTRG.65486"; transcript_id "MSTRG.65486.1"; exon_number "5"; scaffold_3060 StringTie exon 46577 46819 1000 . . gene_id "MSTRG.65499"; transcript_id "MSTRG.65499.1"; exon_number "1"; scaffold_30613 StringTie exon 3006 3325 1000 . . gene_id "MSTRG.65516"; transcript_id "MSTRG.65516.1"; exon_number "1"; scaffold_3064 StringTie exon 3674 4407 1000 . . gene_id "MSTRG.65537"; transcript_id "MSTRG.65537.1"; exon_number "1"; scaffold_30652 StringTie exon 763 1370 1000 . . gene_id "MSTRG.65557"; transcript_id "MSTRG.65557.1"; exon_number "1"; scaffold_30653 StringTie exon 1247 1504 1000 . . gene_id "MSTRG.65558"; transcript_id "MSTRG.65558.1"; exon_number "1"; scaffold_3067 StringTie exon 37164 37465 1000 . . gene_id "MSTRG.65568"; transcript_id "MSTRG.65568.1"; exon_number "1"; scaffold_3067 StringTie exon 69720 70021 1000 . . gene_id "MSTRG.65570"; transcript_id "MSTRG.65570.1"; exon_number "1"; scaffold_3069 StringTie exon 69923 70172 1000 . . gene_id "MSTRG.65593"; transcript_id "MSTRG.65593.1"; exon_number "1"; scaffold_307 StringTie exon 348606 348860 1000 . . gene_id "MSTRG.65616"; transcript_id "MSTRG.65616.1"; exon_number "1"; scaffold_307 StringTie exon 391828 392216 1000 . . gene_id "MSTRG.65621"; transcript_id "MSTRG.65621.1"; exon_number "1"; scaffold_307 StringTie exon 523152 523352 1000 . . gene_id "MSTRG.65628"; transcript_id "MSTRG.65628.1"; exon_number "1"; scaffold_307 StringTie exon 534478 534738 1000 . . gene_id "MSTRG.65630"; transcript_id "MSTRG.65630.1"; exon_number "1"; scaffold_307 StringTie exon 721673 721952 1000 . . gene_id "MSTRG.65649"; transcript_id "MSTRG.65649.1"; exon_number "1"; scaffold_307 StringTie exon 869744 870110 1000 . . gene_id "MSTRG.65657"; transcript_id "MSTRG.65657.1"; exon_number "1"; scaffold_307 StringTie exon 882981 883220 1000 . . gene_id "MSTRG.65663"; transcript_id "MSTRG.65663.1"; exon_number "1"; scaffold_3071 StringTie exon 919 2306 1000 . . gene_id "MSTRG.65682"; transcript_id "MSTRG.65682.1"; exon_number "1"; scaffold_3072 StringTie exon 66276 66638 1000 . . gene_id "MSTRG.65708"; transcript_id "MSTRG.65708.1"; exon_number "1"; scaffold_3074 StringTie exon 38110 38351 1000 . . gene_id "MSTRG.65728"; transcript_id "MSTRG.65728.1"; exon_number "1"; scaffold_3079 StringTie exon 65756 66614 1000 . . gene_id "MSTRG.65772"; transcript_id "MSTRG.65772.1"; exon_number "1"; scaffold_30791 StringTie exon 1 1004 1000 . . gene_id "MSTRG.65775"; transcript_id "MSTRG.65775.1"; exon_number "1"; scaffold_30798 StringTie exon 3816 4186 1000 . . gene_id "MSTRG.65780"; transcript_id "MSTRG.65780.1"; exon_number "1"; scaffold_308 StringTie exon 187579 188270 1000 . . gene_id "MSTRG.65789"; transcript_id "MSTRG.65789.1"; exon_number "1"; scaffold_308 StringTie exon 868728 868976 1000 . . gene_id "MSTRG.65824"; transcript_id "MSTRG.65824.1"; exon_number "1"; scaffold_308 StringTie exon 944131 944427 1000 . . gene_id "MSTRG.65830"; transcript_id "MSTRG.65830.1"; exon_number "1"; scaffold_308 StringTie exon 972180 972431 1000 - . gene_id "MSTRG.65837"; transcript_id "MSTRG.65837.1"; exon_number "1"; scaffold_308 StringTie exon 972529 972660 1000 - . gene_id "MSTRG.65837"; transcript_id "MSTRG.65837.1"; exon_number "2"; scaffold_308 StringTie exon 972924 973032 1000 - . gene_id "MSTRG.65837"; transcript_id "MSTRG.65837.1"; exon_number "3"; scaffold_308 StringTie exon 973246 973258 1000 - . gene_id "MSTRG.65837"; transcript_id "MSTRG.65837.1"; exon_number "4"; scaffold_3080 StringTie exon 12994 13311 1000 . . gene_id "MSTRG.65841"; transcript_id "MSTRG.65841.1"; exon_number "1"; scaffold_30809 StringTie exon 1711 1968 1000 . . gene_id "MSTRG.65856"; transcript_id "MSTRG.65856.1"; exon_number "1"; scaffold_30827 StringTie exon 3051 3405 1000 . . gene_id "MSTRG.65869"; transcript_id "MSTRG.65869.1"; exon_number "1"; scaffold_30840 StringTie exon 765 889 1000 + . gene_id "MSTRG.65884"; transcript_id "MSTRG.65884.1"; exon_number "1"; scaffold_30840 StringTie exon 1314 1392 1000 + . gene_id "MSTRG.65884"; transcript_id "MSTRG.65884.1"; exon_number "2"; scaffold_30840 StringTie exon 3273 3397 1000 + . gene_id "MSTRG.65884"; transcript_id "MSTRG.65884.1"; exon_number "3"; scaffold_30840 StringTie exon 3503 3595 1000 + . gene_id "MSTRG.65884"; transcript_id "MSTRG.65884.1"; exon_number "4"; scaffold_30840 StringTie exon 3677 3839 1000 + . gene_id "MSTRG.65884"; transcript_id "MSTRG.65884.1"; exon_number "5"; scaffold_30847 StringTie exon 1296 1608 1000 . . gene_id "MSTRG.65891"; transcript_id "MSTRG.65891.1"; exon_number "1"; scaffold_3085 StringTie exon 69595 69881 1000 . . gene_id "MSTRG.65902"; transcript_id "MSTRG.65902.1"; exon_number "1"; scaffold_30859 StringTie exon 1296 1648 1000 + . gene_id "MSTRG.65906"; transcript_id "MSTRG.65906.1"; exon_number "1"; scaffold_3086 StringTie exon 66476 66696 1000 . . gene_id "MSTRG.65913"; transcript_id "MSTRG.65913.1"; exon_number "1"; scaffold_3087 StringTie exon 66163 66365 1000 . . gene_id "MSTRG.65924"; transcript_id "MSTRG.65924.1"; exon_number "1"; scaffold_30879 StringTie exon 3328 4165 1000 . . gene_id "MSTRG.65927"; transcript_id "MSTRG.65927.1"; exon_number "1"; scaffold_3089 StringTie exon 51259 51490 1000 . . gene_id "MSTRG.65942"; transcript_id "MSTRG.65942.1"; exon_number "1"; scaffold_30896 StringTie exon 1488 1769 1000 . . gene_id "MSTRG.65945"; transcript_id "MSTRG.65945.1"; exon_number "1"; scaffold_309 StringTie exon 59363 59480 1000 - . gene_id "MSTRG.65954"; transcript_id "MSTRG.65954.1"; exon_number "1"; scaffold_309 StringTie exon 59690 59715 1000 - . gene_id "MSTRG.65954"; transcript_id "MSTRG.65954.1"; exon_number "2"; scaffold_309 StringTie exon 65421 65586 1000 - . gene_id "MSTRG.65954"; transcript_id "MSTRG.65954.1"; exon_number "3"; scaffold_309 StringTie exon 65847 65953 1000 - . gene_id "MSTRG.65954"; transcript_id "MSTRG.65954.1"; exon_number "4"; scaffold_309 StringTie exon 68823 68998 1000 - . gene_id "MSTRG.65954"; transcript_id "MSTRG.65954.1"; exon_number "5"; scaffold_309 StringTie exon 75389 75597 1000 - . gene_id "MSTRG.65954"; transcript_id "MSTRG.65954.1"; exon_number "6"; scaffold_309 StringTie exon 555197 555974 1000 . . gene_id "MSTRG.65986"; transcript_id "MSTRG.65986.1"; exon_number "1"; scaffold_309 StringTie exon 643679 643930 1000 . . gene_id "MSTRG.65992"; transcript_id "MSTRG.65992.1"; exon_number "1"; scaffold_309 StringTie exon 686860 687050 1000 - . gene_id "MSTRG.65995"; transcript_id "MSTRG.65995.2"; exon_number "1"; scaffold_309 StringTie exon 690398 690584 1000 - . gene_id "MSTRG.65995"; transcript_id "MSTRG.65995.2"; exon_number "2"; scaffold_309 StringTie exon 771952 772282 1000 . . gene_id "MSTRG.66001"; transcript_id "MSTRG.66001.1"; exon_number "1"; scaffold_3091 StringTie exon 3613 4255 1000 - . gene_id "MSTRG.66015"; transcript_id "MSTRG.66015.1"; exon_number "1"; scaffold_3092 StringTie exon 28493 29619 1000 - . gene_id "MSTRG.66026"; transcript_id "MSTRG.66026.1"; exon_number "1"; scaffold_3092 StringTie exon 30016 30206 1000 - . gene_id "MSTRG.66026"; transcript_id "MSTRG.66026.1"; exon_number "2"; scaffold_3092 StringTie exon 39755 39877 1000 - . gene_id "MSTRG.66026"; transcript_id "MSTRG.66026.1"; exon_number "3"; scaffold_3092 StringTie exon 47288 47476 1000 - . gene_id "MSTRG.66026"; transcript_id "MSTRG.66026.1"; exon_number "4"; scaffold_3092 StringTie exon 47794 47964 1000 - . gene_id "MSTRG.66026"; transcript_id "MSTRG.66026.1"; exon_number "5"; scaffold_3092 StringTie exon 52521 52716 1000 - . gene_id "MSTRG.66027"; transcript_id "MSTRG.66027.1"; exon_number "1"; scaffold_3092 StringTie exon 54427 54548 1000 - . gene_id "MSTRG.66027"; transcript_id "MSTRG.66027.1"; exon_number "2"; scaffold_3092 StringTie exon 60540 60567 1000 - . gene_id "MSTRG.66027"; transcript_id "MSTRG.66027.1"; exon_number "3"; scaffold_3093 StringTie exon 58270 58474 1000 . . gene_id "MSTRG.66037"; transcript_id "MSTRG.66037.1"; exon_number "1"; scaffold_3094 StringTie exon 22172 22433 1000 . . gene_id "MSTRG.66042"; transcript_id "MSTRG.66042.1"; exon_number "1"; scaffold_3094 StringTie exon 69202 69506 1000 . . gene_id "MSTRG.66051"; transcript_id "MSTRG.66051.1"; exon_number "1"; scaffold_30958 StringTie exon 2 278 1000 . . gene_id "MSTRG.66063"; transcript_id "MSTRG.66063.1"; exon_number "1"; scaffold_30965 StringTie exon 3793 4141 1000 . . gene_id "MSTRG.66070"; transcript_id "MSTRG.66070.1"; exon_number "1"; scaffold_30980 StringTie exon 2189 2425 1000 . . gene_id "MSTRG.66088"; transcript_id "MSTRG.66088.1"; exon_number "1"; scaffold_30986 StringTie exon 365 487 1000 - . gene_id "MSTRG.66092"; transcript_id "MSTRG.66092.1"; exon_number "1"; scaffold_30986 StringTie exon 641 715 1000 - . gene_id "MSTRG.66092"; transcript_id "MSTRG.66092.1"; exon_number "2"; scaffold_30986 StringTie exon 916 1062 1000 - . gene_id "MSTRG.66092"; transcript_id "MSTRG.66092.1"; exon_number "3"; scaffold_30986 StringTie exon 1187 1302 1000 - . gene_id "MSTRG.66092"; transcript_id "MSTRG.66092.1"; exon_number "4"; scaffold_30986 StringTie exon 1686 1821 1000 - . gene_id "MSTRG.66092"; transcript_id "MSTRG.66092.1"; exon_number "5"; scaffold_31 StringTie exon 321304 321684 1000 . . gene_id "MSTRG.66121"; transcript_id "MSTRG.66121.1"; exon_number "1"; scaffold_31 StringTie exon 364537 364767 1000 . . gene_id "MSTRG.66122"; transcript_id "MSTRG.66122.1"; exon_number "1"; scaffold_31 StringTie exon 398858 399080 1000 . . gene_id "MSTRG.66127"; transcript_id "MSTRG.66127.1"; exon_number "1"; scaffold_31 StringTie exon 448657 449044 1000 . . gene_id "MSTRG.66132"; transcript_id "MSTRG.66132.1"; exon_number "1"; scaffold_31 StringTie exon 508283 509063 1000 . . gene_id "MSTRG.66134"; transcript_id "MSTRG.66134.1"; exon_number "1"; scaffold_31 StringTie exon 517820 518074 1000 . . gene_id "MSTRG.66135"; transcript_id "MSTRG.66135.1"; exon_number "1"; scaffold_31 StringTie exon 625964 626225 1000 . . gene_id "MSTRG.66143"; transcript_id "MSTRG.66143.1"; exon_number "1"; scaffold_31 StringTie exon 662503 662723 1000 . . gene_id "MSTRG.66149"; transcript_id "MSTRG.66149.1"; exon_number "1"; scaffold_31 StringTie exon 1108080 1108255 1000 - . gene_id "MSTRG.66173"; transcript_id "MSTRG.66173.2"; exon_number "1"; scaffold_31 StringTie exon 1110820 1110893 1000 - . gene_id "MSTRG.66173"; transcript_id "MSTRG.66173.2"; exon_number "2"; scaffold_31 StringTie exon 1457245 1457480 1000 . . gene_id "MSTRG.66209"; transcript_id "MSTRG.66209.1"; exon_number "1"; scaffold_31 StringTie exon 1562069 1562304 1000 . . gene_id "MSTRG.66221"; transcript_id "MSTRG.66221.1"; exon_number "1"; scaffold_31 StringTie exon 1683891 1684121 1000 . . gene_id "MSTRG.66236"; transcript_id "MSTRG.66236.1"; exon_number "1"; scaffold_31 StringTie exon 1794250 1794562 1000 - . gene_id "MSTRG.66242"; transcript_id "MSTRG.66242.1"; exon_number "1"; scaffold_31 StringTie exon 1794901 1795017 1000 - . gene_id "MSTRG.66242"; transcript_id "MSTRG.66242.1"; exon_number "2"; scaffold_31 StringTie exon 1795385 1795474 1000 - . gene_id "MSTRG.66242"; transcript_id "MSTRG.66242.1"; exon_number "3"; scaffold_31 StringTie exon 1796071 1796200 1000 - . gene_id "MSTRG.66242"; transcript_id "MSTRG.66242.1"; exon_number "4"; scaffold_31 StringTie exon 1796520 1796668 1000 - . gene_id "MSTRG.66242"; transcript_id "MSTRG.66242.1"; exon_number "5"; scaffold_31 StringTie exon 1796883 1797027 1000 - . gene_id "MSTRG.66242"; transcript_id "MSTRG.66242.1"; exon_number "6"; scaffold_31 StringTie exon 1798298 1798744 1000 - . gene_id "MSTRG.66242"; transcript_id "MSTRG.66242.1"; exon_number "7"; scaffold_31 StringTie exon 1856539 1856622 1000 - . gene_id "MSTRG.66251"; transcript_id "MSTRG.66251.1"; exon_number "1"; scaffold_31 StringTie exon 1856810 1856917 1000 - . gene_id "MSTRG.66251"; transcript_id "MSTRG.66251.1"; exon_number "2"; scaffold_31 StringTie exon 1858281 1858373 1000 - . gene_id "MSTRG.66251"; transcript_id "MSTRG.66251.1"; exon_number "3"; scaffold_31 StringTie exon 1858763 1858848 1000 - . gene_id "MSTRG.66251"; transcript_id "MSTRG.66251.1"; exon_number "4"; scaffold_31 StringTie exon 1968101 1968238 1000 + . gene_id "MSTRG.66263"; transcript_id "MSTRG.66263.1"; exon_number "1"; scaffold_31 StringTie exon 1968541 1968628 1000 + . gene_id "MSTRG.66263"; transcript_id "MSTRG.66263.1"; exon_number "2"; scaffold_31 StringTie exon 1971444 1971502 1000 + . gene_id "MSTRG.66263"; transcript_id "MSTRG.66263.1"; exon_number "3"; scaffold_31 StringTie exon 1973320 1973414 1000 + . gene_id "MSTRG.66263"; transcript_id "MSTRG.66263.1"; exon_number "4"; scaffold_31 StringTie exon 1973767 1973895 1000 + . gene_id "MSTRG.66263"; transcript_id "MSTRG.66263.1"; exon_number "5"; scaffold_31 StringTie exon 1974561 1975676 1000 + . gene_id "MSTRG.66263"; transcript_id "MSTRG.66263.1"; exon_number "6"; scaffold_31 StringTie exon 2361883 2362332 1000 . . gene_id "MSTRG.66290"; transcript_id "MSTRG.66290.1"; exon_number "1"; scaffold_310 StringTie exon 67337 68127 1000 . . gene_id "MSTRG.66294"; transcript_id "MSTRG.66294.1"; exon_number "1"; scaffold_310 StringTie exon 371935 372180 1000 . . gene_id "MSTRG.66308"; transcript_id "MSTRG.66308.1"; exon_number "1"; scaffold_310 StringTie exon 789794 790123 1000 . . gene_id "MSTRG.66329"; transcript_id "MSTRG.66329.1"; exon_number "1"; scaffold_310 StringTie exon 837211 837430 1000 . . gene_id "MSTRG.66334"; transcript_id "MSTRG.66334.1"; exon_number "1"; scaffold_3100 StringTie exon 40629 41123 1000 + . gene_id "MSTRG.66355"; transcript_id "MSTRG.66355.1"; exon_number "1"; scaffold_3100 StringTie exon 41387 41538 1000 + . gene_id "MSTRG.66355"; transcript_id "MSTRG.66355.1"; exon_number "2"; scaffold_3100 StringTie exon 42357 42532 1000 + . gene_id "MSTRG.66355"; transcript_id "MSTRG.66355.1"; exon_number "3"; scaffold_3100 StringTie exon 42780 42881 1000 + . gene_id "MSTRG.66355"; transcript_id "MSTRG.66355.1"; exon_number "4"; scaffold_3100 StringTie exon 43321 43474 1000 + . gene_id "MSTRG.66355"; transcript_id "MSTRG.66355.1"; exon_number "5"; scaffold_3100 StringTie exon 47424 47944 1000 . . gene_id "MSTRG.66357"; transcript_id "MSTRG.66357.1"; exon_number "1"; scaffold_31008 StringTie exon 2374 2586 1000 . . gene_id "MSTRG.66362"; transcript_id "MSTRG.66362.1"; exon_number "1"; scaffold_3101 StringTie exon 61439 61671 1000 . . gene_id "MSTRG.66368"; transcript_id "MSTRG.66368.1"; exon_number "1"; scaffold_3102 StringTie exon 25965 26086 1000 - . gene_id "MSTRG.66381"; transcript_id "MSTRG.66381.1"; exon_number "1"; scaffold_3102 StringTie exon 26352 26514 1000 - . gene_id "MSTRG.66381"; transcript_id "MSTRG.66381.1"; exon_number "2"; scaffold_3102 StringTie exon 26940 27083 1000 - . gene_id "MSTRG.66381"; transcript_id "MSTRG.66381.1"; exon_number "3"; scaffold_3103 StringTie exon 35160 35378 1000 + . gene_id "MSTRG.66388"; transcript_id "MSTRG.66388.1"; exon_number "1"; scaffold_3103 StringTie exon 38369 38378 1000 + . gene_id "MSTRG.66388"; transcript_id "MSTRG.66388.1"; exon_number "2"; scaffold_3103 StringTie exon 49016 49375 1000 - . gene_id "MSTRG.66391"; transcript_id "MSTRG.66391.1"; exon_number "1"; scaffold_3103 StringTie exon 50196 50305 1000 - . gene_id "MSTRG.66391"; transcript_id "MSTRG.66391.1"; exon_number "2"; scaffold_3103 StringTie exon 50512 50572 1000 - . gene_id "MSTRG.66391"; transcript_id "MSTRG.66391.1"; exon_number "3"; scaffold_3103 StringTie exon 50893 50976 1000 - . gene_id "MSTRG.66391"; transcript_id "MSTRG.66391.1"; exon_number "4"; scaffold_3103 StringTie exon 51469 51640 1000 - . gene_id "MSTRG.66391"; transcript_id "MSTRG.66391.1"; exon_number "5"; scaffold_3105 StringTie exon 53630 53640 1000 + . gene_id "MSTRG.66419"; transcript_id "MSTRG.66419.1"; exon_number "1"; scaffold_3105 StringTie exon 54318 54491 1000 + . gene_id "MSTRG.66419"; transcript_id "MSTRG.66419.1"; exon_number "2"; scaffold_3105 StringTie exon 56114 56165 1000 + . gene_id "MSTRG.66419"; transcript_id "MSTRG.66419.1"; exon_number "3"; scaffold_3106 StringTie exon 18892 19116 1000 . . gene_id "MSTRG.66426"; transcript_id "MSTRG.66426.1"; exon_number "1"; scaffold_31091 StringTie exon 3823 4064 1000 . . gene_id "MSTRG.66461"; transcript_id "MSTRG.66461.1"; exon_number "1"; scaffold_311 StringTie exon 120267 120821 1000 . . gene_id "MSTRG.66480"; transcript_id "MSTRG.66480.1"; exon_number "1"; scaffold_311 StringTie exon 123847 124303 1000 . . gene_id "MSTRG.66483"; transcript_id "MSTRG.66483.1"; exon_number "1"; scaffold_311 StringTie exon 153024 153257 1000 . . gene_id "MSTRG.66486"; transcript_id "MSTRG.66486.1"; exon_number "1"; scaffold_311 StringTie exon 253137 253542 1000 . . gene_id "MSTRG.66490"; transcript_id "MSTRG.66490.1"; exon_number "1"; scaffold_311 StringTie exon 453398 453625 1000 - . gene_id "MSTRG.66508"; transcript_id "MSTRG.66508.1"; exon_number "1"; scaffold_311 StringTie exon 462451 462554 1000 - . gene_id "MSTRG.66508"; transcript_id "MSTRG.66508.1"; exon_number "2"; scaffold_311 StringTie exon 468971 469487 1000 - . gene_id "MSTRG.66508"; transcript_id "MSTRG.66508.1"; exon_number "3"; scaffold_311 StringTie exon 668451 668667 1000 . . gene_id "MSTRG.66523"; transcript_id "MSTRG.66523.1"; exon_number "1"; scaffold_311 StringTie exon 965733 965950 1000 . . gene_id "MSTRG.66530"; transcript_id "MSTRG.66530.1"; exon_number "1"; scaffold_31105 StringTie exon 3409 3631 1000 . . gene_id "MSTRG.66541"; transcript_id "MSTRG.66541.1"; exon_number "1"; scaffold_31111 StringTie exon 260 593 1000 . . gene_id "MSTRG.66552"; transcript_id "MSTRG.66552.1"; exon_number "1"; scaffold_3112 StringTie exon 59260 59541 1000 . . gene_id "MSTRG.66561"; transcript_id "MSTRG.66561.1"; exon_number "1"; scaffold_3113 StringTie exon 53456 53663 1000 . . gene_id "MSTRG.66571"; transcript_id "MSTRG.66571.1"; exon_number "1"; scaffold_3115 StringTie exon 30531 30752 1000 . . gene_id "MSTRG.66583"; transcript_id "MSTRG.66583.1"; exon_number "1"; scaffold_31155 StringTie exon 2079 2648 1000 . . gene_id "MSTRG.66588"; transcript_id "MSTRG.66588.1"; exon_number "1"; scaffold_31169 StringTie exon 1092 1349 1000 - . gene_id "MSTRG.66596"; transcript_id "MSTRG.66596.1"; exon_number "1"; scaffold_31169 StringTie exon 1652 1796 1000 - . gene_id "MSTRG.66596"; transcript_id "MSTRG.66596.1"; exon_number "2"; scaffold_31169 StringTie exon 1895 2024 1000 - . gene_id "MSTRG.66596"; transcript_id "MSTRG.66596.1"; exon_number "3"; scaffold_31169 StringTie exon 2302 2869 1000 - . gene_id "MSTRG.66596"; transcript_id "MSTRG.66596.1"; exon_number "4"; scaffold_3117 StringTie exon 11727 11769 1000 - . gene_id "MSTRG.66601"; transcript_id "MSTRG.66601.1"; exon_number "1"; scaffold_3117 StringTie exon 12068 12175 1000 - . gene_id "MSTRG.66601"; transcript_id "MSTRG.66601.1"; exon_number "2"; scaffold_3117 StringTie exon 12295 12372 1000 - . gene_id "MSTRG.66601"; transcript_id "MSTRG.66601.1"; exon_number "3"; scaffold_3117 StringTie exon 12495 12558 1000 - . gene_id "MSTRG.66601"; transcript_id "MSTRG.66601.1"; exon_number "4"; scaffold_3117 StringTie exon 13487 13508 1000 - . gene_id "MSTRG.66601"; transcript_id "MSTRG.66601.1"; exon_number "5"; scaffold_31178 StringTie exon 2611 2821 1000 . . gene_id "MSTRG.66609"; transcript_id "MSTRG.66609.1"; exon_number "1"; scaffold_31186 StringTie exon 3656 3858 1000 . . gene_id "MSTRG.66618"; transcript_id "MSTRG.66618.1"; exon_number "1"; scaffold_3119 StringTie exon 1154 1371 1000 . . gene_id "MSTRG.66620"; transcript_id "MSTRG.66620.1"; exon_number "1"; scaffold_312 StringTie exon 4620 4905 1000 . . gene_id "MSTRG.66633"; transcript_id "MSTRG.66633.1"; exon_number "1"; scaffold_312 StringTie exon 209703 210171 1000 . . gene_id "MSTRG.66654"; transcript_id "MSTRG.66654.1"; exon_number "1"; scaffold_312 StringTie exon 275942 276167 1000 . . gene_id "MSTRG.66670"; transcript_id "MSTRG.66670.1"; exon_number "1"; scaffold_312 StringTie exon 429650 430242 1000 . . gene_id "MSTRG.66689"; transcript_id "MSTRG.66689.1"; exon_number "1"; scaffold_312 StringTie exon 578385 578696 1000 . . gene_id "MSTRG.66713"; transcript_id "MSTRG.66713.1"; exon_number "1"; scaffold_312 StringTie exon 593404 593649 1000 . . gene_id "MSTRG.66714"; transcript_id "MSTRG.66714.1"; exon_number "1"; scaffold_312 StringTie exon 800937 801290 1000 . . gene_id "MSTRG.66742"; transcript_id "MSTRG.66742.1"; exon_number "1"; scaffold_312 StringTie exon 810419 810850 1000 . . gene_id "MSTRG.66745"; transcript_id "MSTRG.66745.1"; exon_number "1"; scaffold_3120 StringTie exon 42440 43154 1000 . . gene_id "MSTRG.66764"; transcript_id "MSTRG.66764.1"; exon_number "1"; scaffold_31221 StringTie exon 2924 3130 1000 . . gene_id "MSTRG.66790"; transcript_id "MSTRG.66790.1"; exon_number "1"; scaffold_31232 StringTie exon 2273 2548 1000 . . gene_id "MSTRG.66803"; transcript_id "MSTRG.66803.1"; exon_number "1"; scaffold_31238 StringTie exon 2794 3023 1000 + . gene_id "MSTRG.66804"; transcript_id "MSTRG.66804.1"; exon_number "1"; scaffold_3124 StringTie exon 70092 70304 1000 . . gene_id "MSTRG.66811"; transcript_id "MSTRG.66811.1"; exon_number "1"; scaffold_3125 StringTie exon 68029 68332 1000 . . gene_id "MSTRG.66823"; transcript_id "MSTRG.66823.1"; exon_number "1"; scaffold_31265 StringTie exon 2946 3372 1000 . . gene_id "MSTRG.66835"; transcript_id "MSTRG.66835.1"; exon_number "1"; scaffold_3127 StringTie exon 18427 19191 1000 - . gene_id "MSTRG.66840"; transcript_id "MSTRG.66840.1"; exon_number "1"; scaffold_3127 StringTie exon 20146 20238 1000 - . gene_id "MSTRG.66840"; transcript_id "MSTRG.66840.1"; exon_number "2"; scaffold_3127 StringTie exon 20424 20526 1000 - . gene_id "MSTRG.66840"; transcript_id "MSTRG.66840.1"; exon_number "3"; scaffold_31277 StringTie exon 3868 4089 1000 . . gene_id "MSTRG.66845"; transcript_id "MSTRG.66845.1"; exon_number "1"; scaffold_3128 StringTie exon 26068 26338 1000 - . gene_id "MSTRG.66856"; transcript_id "MSTRG.66856.1"; exon_number "1"; scaffold_3128 StringTie exon 27508 27520 1000 - . gene_id "MSTRG.66856"; transcript_id "MSTRG.66856.1"; exon_number "2"; scaffold_3128 StringTie exon 48334 48601 1000 . . gene_id "MSTRG.66859"; transcript_id "MSTRG.66859.1"; exon_number "1"; scaffold_3129 StringTie exon 58938 59175 1000 . . gene_id "MSTRG.66876"; transcript_id "MSTRG.66876.1"; exon_number "1"; scaffold_313 StringTie exon 462281 462350 1000 + . gene_id "MSTRG.66904"; transcript_id "MSTRG.66904.1"; exon_number "1"; scaffold_313 StringTie exon 465886 466318 1000 + . gene_id "MSTRG.66904"; transcript_id "MSTRG.66904.1"; exon_number "2"; scaffold_31312 StringTie exon 47 386 1000 . . gene_id "MSTRG.66954"; transcript_id "MSTRG.66954.1"; exon_number "1"; scaffold_3133 StringTie exon 34617 34880 1000 . . gene_id "MSTRG.66971"; transcript_id "MSTRG.66971.1"; exon_number "1"; scaffold_3134 StringTie exon 11022 11263 1000 . . gene_id "MSTRG.66978"; transcript_id "MSTRG.66978.1"; exon_number "1"; scaffold_31340 StringTie exon 1713 1924 1000 . . gene_id "MSTRG.66982"; transcript_id "MSTRG.66982.1"; exon_number "1"; scaffold_3138 StringTie exon 21924 22124 1000 . . gene_id "MSTRG.67019"; transcript_id "MSTRG.67019.1"; exon_number "1"; scaffold_314 StringTie exon 44251 44753 1000 . . gene_id "MSTRG.67033"; transcript_id "MSTRG.67033.1"; exon_number "1"; scaffold_314 StringTie exon 157606 157872 1000 . . gene_id "MSTRG.67043"; transcript_id "MSTRG.67043.1"; exon_number "1"; scaffold_314 StringTie exon 537318 537373 1000 + . gene_id "MSTRG.67078"; transcript_id "MSTRG.67078.1"; exon_number "1"; scaffold_314 StringTie exon 537781 537938 1000 + . gene_id "MSTRG.67078"; transcript_id "MSTRG.67078.1"; exon_number "2"; scaffold_314 StringTie exon 538960 539084 1000 + . gene_id "MSTRG.67078"; transcript_id "MSTRG.67078.1"; exon_number "3"; scaffold_314 StringTie exon 540520 540699 1000 + . gene_id "MSTRG.67078"; transcript_id "MSTRG.67078.1"; exon_number "4"; scaffold_314 StringTie exon 540958 541139 1000 + . gene_id "MSTRG.67078"; transcript_id "MSTRG.67078.1"; exon_number "5"; scaffold_314 StringTie exon 541790 541962 1000 + . gene_id "MSTRG.67078"; transcript_id "MSTRG.67078.1"; exon_number "6"; scaffold_314 StringTie exon 542676 542786 1000 + . gene_id "MSTRG.67078"; transcript_id "MSTRG.67078.1"; exon_number "7"; scaffold_314 StringTie exon 544558 545008 1000 + . gene_id "MSTRG.67078"; transcript_id "MSTRG.67078.1"; exon_number "8"; scaffold_314 StringTie exon 561011 561232 1000 + . gene_id "MSTRG.67080"; transcript_id "MSTRG.67080.1"; exon_number "1"; scaffold_314 StringTie exon 561616 561739 1000 + . gene_id "MSTRG.67080"; transcript_id "MSTRG.67080.1"; exon_number "2"; scaffold_314 StringTie exon 561888 562651 1000 + . gene_id "MSTRG.67080"; transcript_id "MSTRG.67080.1"; exon_number "3"; scaffold_314 StringTie exon 592559 592640 1000 - . gene_id "MSTRG.67085"; transcript_id "MSTRG.67085.1"; exon_number "1"; scaffold_314 StringTie exon 593409 593490 1000 - . gene_id "MSTRG.67085"; transcript_id "MSTRG.67085.1"; exon_number "2"; scaffold_314 StringTie exon 593747 593925 1000 - . gene_id "MSTRG.67085"; transcript_id "MSTRG.67085.1"; exon_number "3"; scaffold_314 StringTie exon 598342 598357 1000 - . gene_id "MSTRG.67085"; transcript_id "MSTRG.67085.1"; exon_number "4"; scaffold_314 StringTie exon 612586 613065 1000 . . gene_id "MSTRG.67086"; transcript_id "MSTRG.67086.1"; exon_number "1"; scaffold_314 StringTie exon 739544 739787 1000 . . gene_id "MSTRG.67094"; transcript_id "MSTRG.67094.1"; exon_number "1"; scaffold_314 StringTie exon 809321 809646 1000 . . gene_id "MSTRG.67096"; transcript_id "MSTRG.67096.1"; exon_number "1"; scaffold_31402 StringTie exon 2392 2606 1000 . . gene_id "MSTRG.67107"; transcript_id "MSTRG.67107.1"; exon_number "1"; scaffold_31428 StringTie exon 1660 3834 1000 . . gene_id "MSTRG.67129"; transcript_id "MSTRG.67129.1"; exon_number "1"; scaffold_31434 StringTie exon 1676 1876 1000 . . gene_id "MSTRG.67136"; transcript_id "MSTRG.67136.1"; exon_number "1"; scaffold_31468 StringTie exon 1387 1800 1000 . . gene_id "MSTRG.67161"; transcript_id "MSTRG.67161.1"; exon_number "1"; scaffold_3147 StringTie exon 11448 12093 1000 . . gene_id "MSTRG.67163"; transcript_id "MSTRG.67163.1"; exon_number "1"; scaffold_315 StringTie exon 438016 438246 1000 . . gene_id "MSTRG.67214"; transcript_id "MSTRG.67214.1"; exon_number "1"; scaffold_315 StringTie exon 489524 489822 1000 . . gene_id "MSTRG.67217"; transcript_id "MSTRG.67217.1"; exon_number "1"; scaffold_315 StringTie exon 710319 710524 1000 . . gene_id "MSTRG.67229"; transcript_id "MSTRG.67229.1"; exon_number "1"; scaffold_315 StringTie exon 747796 748155 1000 . . gene_id "MSTRG.67232"; transcript_id "MSTRG.67232.1"; exon_number "1"; scaffold_3150 StringTie exon 10657 10866 1000 . . gene_id "MSTRG.67267"; transcript_id "MSTRG.67267.1"; exon_number "1"; scaffold_3151 StringTie exon 68229 68437 1000 . . gene_id "MSTRG.67277"; transcript_id "MSTRG.67277.1"; exon_number "1"; scaffold_3152 StringTie exon 18576 18975 1000 . . gene_id "MSTRG.67282"; transcript_id "MSTRG.67282.1"; exon_number "1"; scaffold_31542 StringTie exon 1076 1339 1000 . . gene_id "MSTRG.67307"; transcript_id "MSTRG.67307.1"; exon_number "1"; scaffold_3157 StringTie exon 24653 24751 1000 + . gene_id "MSTRG.67333"; transcript_id "MSTRG.67333.2"; exon_number "1"; scaffold_3157 StringTie exon 25678 25773 1000 + . gene_id "MSTRG.67333"; transcript_id "MSTRG.67333.2"; exon_number "2"; scaffold_3157 StringTie exon 25978 26164 1000 + . gene_id "MSTRG.67333"; transcript_id "MSTRG.67333.2"; exon_number "3"; scaffold_3157 StringTie exon 26639 26673 1000 + . gene_id "MSTRG.67333"; transcript_id "MSTRG.67333.2"; exon_number "4"; scaffold_31572 StringTie exon 337 546 1000 . . gene_id "MSTRG.67339"; transcript_id "MSTRG.67339.1"; exon_number "1"; scaffold_31579 StringTie exon 3772 4054 1000 . . gene_id "MSTRG.67341"; transcript_id "MSTRG.67341.1"; exon_number "1"; scaffold_31589 StringTie exon 1 396 1000 . . gene_id "MSTRG.67352"; transcript_id "MSTRG.67352.1"; exon_number "1"; scaffold_31589 StringTie exon 3805 4056 1000 - . gene_id "MSTRG.67353"; transcript_id "MSTRG.67353.1"; exon_number "1"; scaffold_31590 StringTie exon 1722 1939 1000 . . gene_id "MSTRG.67359"; transcript_id "MSTRG.67359.1"; exon_number "1"; scaffold_31594 StringTie exon 708 1765 1000 - . gene_id "MSTRG.67361"; transcript_id "MSTRG.67361.1"; exon_number "1"; scaffold_31594 StringTie exon 2063 2223 1000 - . gene_id "MSTRG.67361"; transcript_id "MSTRG.67361.1"; exon_number "2"; scaffold_31594 StringTie exon 2509 2599 1000 - . gene_id "MSTRG.67361"; transcript_id "MSTRG.67361.1"; exon_number "3"; scaffold_31594 StringTie exon 3018 3045 1000 - . gene_id "MSTRG.67361"; transcript_id "MSTRG.67361.1"; exon_number "4"; scaffold_316 StringTie exon 192804 193016 1000 . . gene_id "MSTRG.67381"; transcript_id "MSTRG.67381.1"; exon_number "1"; scaffold_316 StringTie exon 259166 259736 1000 . . gene_id "MSTRG.67388"; transcript_id "MSTRG.67388.1"; exon_number "1"; scaffold_316 StringTie exon 492780 493011 1000 - . gene_id "MSTRG.67400"; transcript_id "MSTRG.67400.1"; exon_number "1"; scaffold_316 StringTie exon 802762 802850 1000 - . gene_id "MSTRG.67427"; transcript_id "MSTRG.67427.1"; exon_number "1"; scaffold_316 StringTie exon 803022 803189 1000 - . gene_id "MSTRG.67427"; transcript_id "MSTRG.67427.1"; exon_number "2"; scaffold_316 StringTie exon 803475 803627 1000 - . gene_id "MSTRG.67427"; transcript_id "MSTRG.67427.1"; exon_number "3"; scaffold_316 StringTie exon 803830 803938 1000 - . gene_id "MSTRG.67427"; transcript_id "MSTRG.67427.1"; exon_number "4"; scaffold_316 StringTie exon 817304 817430 1000 - . gene_id "MSTRG.67430"; transcript_id "MSTRG.67430.1"; exon_number "1"; scaffold_316 StringTie exon 818701 818837 1000 - . gene_id "MSTRG.67430"; transcript_id "MSTRG.67430.1"; exon_number "2"; scaffold_316 StringTie exon 822546 822839 1000 - . gene_id "MSTRG.67430"; transcript_id "MSTRG.67430.1"; exon_number "3"; scaffold_316 StringTie exon 860556 861342 1000 - . gene_id "MSTRG.67436"; transcript_id "MSTRG.67436.1"; exon_number "1"; scaffold_3160 StringTie exon 2887 3106 1000 . . gene_id "MSTRG.67447"; transcript_id "MSTRG.67447.1"; exon_number "1"; scaffold_31603 StringTie exon 238 624 1000 . . gene_id "MSTRG.67454"; transcript_id "MSTRG.67454.1"; exon_number "1"; scaffold_3161 StringTie exon 61310 61549 1000 . . gene_id "MSTRG.67460"; transcript_id "MSTRG.67460.1"; exon_number "1"; scaffold_3162 StringTie exon 1174 1262 1000 + . gene_id "MSTRG.67464"; transcript_id "MSTRG.67464.1"; exon_number "1"; scaffold_3162 StringTie exon 1903 2182 1000 + . gene_id "MSTRG.67464"; transcript_id "MSTRG.67464.1"; exon_number "2"; scaffold_3162 StringTie exon 28373 28794 1000 - . gene_id "MSTRG.67469"; transcript_id "MSTRG.67469.1"; exon_number "1"; scaffold_3162 StringTie exon 29524 29643 1000 - . gene_id "MSTRG.67469"; transcript_id "MSTRG.67469.1"; exon_number "2"; scaffold_31643 StringTie exon 3 364 1000 . . gene_id "MSTRG.67499"; transcript_id "MSTRG.67499.1"; exon_number "1"; scaffold_31663 StringTie exon 830 1065 1000 . . gene_id "MSTRG.67524"; transcript_id "MSTRG.67524.1"; exon_number "1"; scaffold_3167 StringTie exon 13113 13444 1000 . . gene_id "MSTRG.67533"; transcript_id "MSTRG.67533.1"; exon_number "1"; scaffold_3167 StringTie exon 65214 65742 1000 . . gene_id "MSTRG.67542"; transcript_id "MSTRG.67542.1"; exon_number "1"; scaffold_3168 StringTie exon 5007 5228 1000 . . gene_id "MSTRG.67551"; transcript_id "MSTRG.67551.1"; exon_number "1"; scaffold_3169 StringTie exon 66184 66401 1000 . . gene_id "MSTRG.67567"; transcript_id "MSTRG.67567.1"; exon_number "1"; scaffold_317 StringTie exon 180411 181892 1000 - . gene_id "MSTRG.67582"; transcript_id "MSTRG.67582.1"; exon_number "1"; scaffold_317 StringTie exon 190539 190608 1000 - . gene_id "MSTRG.67582"; transcript_id "MSTRG.67582.1"; exon_number "2"; scaffold_317 StringTie exon 190724 190786 1000 - . gene_id "MSTRG.67582"; transcript_id "MSTRG.67582.1"; exon_number "3"; scaffold_317 StringTie exon 193629 193704 1000 - . gene_id "MSTRG.67582"; transcript_id "MSTRG.67582.1"; exon_number "4"; scaffold_317 StringTie exon 194383 194453 1000 - . gene_id "MSTRG.67582"; transcript_id "MSTRG.67582.1"; exon_number "5"; scaffold_317 StringTie exon 194630 194747 1000 - . gene_id "MSTRG.67582"; transcript_id "MSTRG.67582.1"; exon_number "6"; scaffold_317 StringTie exon 195276 195409 1000 - . gene_id "MSTRG.67582"; transcript_id "MSTRG.67582.1"; exon_number "7"; scaffold_317 StringTie exon 200555 201308 1000 - . gene_id "MSTRG.67582"; transcript_id "MSTRG.67582.1"; exon_number "8"; scaffold_317 StringTie exon 542096 542305 1000 . . gene_id "MSTRG.67627"; transcript_id "MSTRG.67627.1"; exon_number "1"; scaffold_317 StringTie exon 587479 587812 1000 . . gene_id "MSTRG.67631"; transcript_id "MSTRG.67631.1"; exon_number "1"; scaffold_317 StringTie exon 691619 691964 1000 - . gene_id "MSTRG.67646"; transcript_id "MSTRG.67646.1"; exon_number "1"; scaffold_317 StringTie exon 692460 692607 1000 - . gene_id "MSTRG.67646"; transcript_id "MSTRG.67646.1"; exon_number "2"; scaffold_317 StringTie exon 692717 692792 1000 - . gene_id "MSTRG.67646"; transcript_id "MSTRG.67646.1"; exon_number "3"; scaffold_317 StringTie exon 693230 693671 1000 - . gene_id "MSTRG.67646"; transcript_id "MSTRG.67646.1"; exon_number "4"; scaffold_31718 StringTie exon 2669 2885 1000 . . gene_id "MSTRG.67679"; transcript_id "MSTRG.67679.1"; exon_number "1"; scaffold_31719 StringTie exon 2566 3957 1000 . . gene_id "MSTRG.67680"; transcript_id "MSTRG.67680.1"; exon_number "1"; scaffold_3173 StringTie exon 231 537 1000 . . gene_id "MSTRG.67686"; transcript_id "MSTRG.67686.1"; exon_number "1"; scaffold_31745 StringTie exon 3222 3915 1000 . . gene_id "MSTRG.67698"; transcript_id "MSTRG.67698.1"; exon_number "1"; scaffold_3177 StringTie exon 69586 70035 1000 . . gene_id "MSTRG.67725"; transcript_id "MSTRG.67725.1"; exon_number "1"; scaffold_31795 StringTie exon 2249 2323 1000 - . gene_id "MSTRG.67750"; transcript_id "MSTRG.67750.1"; exon_number "1"; scaffold_31795 StringTie exon 3529 3669 1000 - . gene_id "MSTRG.67750"; transcript_id "MSTRG.67750.1"; exon_number "2"; scaffold_318 StringTie exon 7866 8117 1000 . . gene_id "MSTRG.67753"; transcript_id "MSTRG.67753.1"; exon_number "1"; scaffold_318 StringTie exon 483478 483748 1000 . . gene_id "MSTRG.67784"; transcript_id "MSTRG.67784.1"; exon_number "1"; scaffold_318 StringTie exon 961346 962046 1000 . . gene_id "MSTRG.67820"; transcript_id "MSTRG.67820.1"; exon_number "1"; scaffold_31812 StringTie exon 1869 2568 1000 . . gene_id "MSTRG.67834"; transcript_id "MSTRG.67834.1"; exon_number "1"; scaffold_31819 StringTie exon 2520 2830 1000 . . gene_id "MSTRG.67840"; transcript_id "MSTRG.67840.1"; exon_number "1"; scaffold_31827 StringTie exon 2089 2295 1000 . . gene_id "MSTRG.67847"; transcript_id "MSTRG.67847.1"; exon_number "1"; scaffold_31833 StringTie exon 107 416 1000 . . gene_id "MSTRG.67853"; transcript_id "MSTRG.67853.1"; exon_number "1"; scaffold_3184 StringTie exon 50157 50315 1000 + . gene_id "MSTRG.67863"; transcript_id "MSTRG.67863.1"; exon_number "1"; scaffold_3184 StringTie exon 59609 59746 1000 + . gene_id "MSTRG.67863"; transcript_id "MSTRG.67863.1"; exon_number "2"; scaffold_3186 StringTie exon 1558 1814 1000 . . gene_id "MSTRG.67882"; transcript_id "MSTRG.67882.1"; exon_number "1"; scaffold_31887 StringTie exon 2958 3269 1000 . . gene_id "MSTRG.67906"; transcript_id "MSTRG.67906.1"; exon_number "1"; scaffold_319 StringTie exon 36072 36277 1000 . . gene_id "MSTRG.67916"; transcript_id "MSTRG.67916.1"; exon_number "1"; scaffold_319 StringTie exon 315069 315337 1000 . . gene_id "MSTRG.67938"; transcript_id "MSTRG.67938.1"; exon_number "1"; scaffold_319 StringTie exon 533058 533346 1000 . . gene_id "MSTRG.67948"; transcript_id "MSTRG.67948.1"; exon_number "1"; scaffold_319 StringTie exon 809396 809482 1000 - . gene_id "MSTRG.67965"; transcript_id "MSTRG.67965.1"; exon_number "1"; scaffold_319 StringTie exon 815838 816048 1000 - . gene_id "MSTRG.67965"; transcript_id "MSTRG.67965.1"; exon_number "2"; scaffold_319 StringTie exon 816595 816756 1000 - . gene_id "MSTRG.67965"; transcript_id "MSTRG.67965.1"; exon_number "3"; scaffold_319 StringTie exon 817017 817030 1000 - . gene_id "MSTRG.67965"; transcript_id "MSTRG.67965.1"; exon_number "4"; scaffold_31905 StringTie exon 3512 3800 1000 . . gene_id "MSTRG.67982"; transcript_id "MSTRG.67982.1"; exon_number "1"; scaffold_3191 StringTie exon 7069 7745 1000 . . gene_id "MSTRG.67986"; transcript_id "MSTRG.67986.1"; exon_number "1"; scaffold_3191 StringTie exon 27537 27592 1000 + . gene_id "MSTRG.67992"; transcript_id "MSTRG.67992.1"; exon_number "1"; scaffold_3191 StringTie exon 27831 28034 1000 + . gene_id "MSTRG.67992"; transcript_id "MSTRG.67992.1"; exon_number "2"; scaffold_3191 StringTie exon 28340 28496 1000 + . gene_id "MSTRG.67992"; transcript_id "MSTRG.67992.1"; exon_number "3"; scaffold_3191 StringTie exon 28605 28816 1000 + . gene_id "MSTRG.67993"; transcript_id "MSTRG.67993.1"; exon_number "1"; scaffold_3191 StringTie exon 56940 57012 1000 + . gene_id "MSTRG.67993"; transcript_id "MSTRG.67993.1"; exon_number "2"; scaffold_3192 StringTie exon 2700 3005 1000 . . gene_id "MSTRG.68006"; transcript_id "MSTRG.68006.1"; exon_number "1"; scaffold_3193 StringTie exon 44479 46230 1000 . . gene_id "MSTRG.68011"; transcript_id "MSTRG.68011.1"; exon_number "1"; scaffold_31990 StringTie exon 604 829 1000 . . gene_id "MSTRG.68064"; transcript_id "MSTRG.68064.1"; exon_number "1"; scaffold_32 StringTie exon 449205 449487 1000 . . gene_id "MSTRG.68110"; transcript_id "MSTRG.68110.1"; exon_number "1"; scaffold_32 StringTie exon 601343 601578 1000 . . gene_id "MSTRG.68117"; transcript_id "MSTRG.68117.1"; exon_number "1"; scaffold_32 StringTie exon 792152 792419 1000 . . gene_id "MSTRG.68124"; transcript_id "MSTRG.68124.1"; exon_number "1"; scaffold_32 StringTie exon 1521751 1521778 1000 + . gene_id "MSTRG.68182"; transcript_id "MSTRG.68182.1"; exon_number "1"; scaffold_32 StringTie exon 1522024 1522323 1000 + . gene_id "MSTRG.68182"; transcript_id "MSTRG.68182.1"; exon_number "2"; scaffold_32 StringTie exon 1523408 1523472 1000 + . gene_id "MSTRG.68182"; transcript_id "MSTRG.68182.1"; exon_number "3"; scaffold_32 StringTie exon 1523615 1523664 1000 + . gene_id "MSTRG.68182"; transcript_id "MSTRG.68182.1"; exon_number "4"; scaffold_32 StringTie exon 2077324 2077645 1000 . . gene_id "MSTRG.68222"; transcript_id "MSTRG.68222.1"; exon_number "1"; scaffold_32 StringTie exon 2116735 2117005 1000 . . gene_id "MSTRG.68226"; transcript_id "MSTRG.68226.1"; exon_number "1"; scaffold_32 StringTie exon 2412834 2413116 1000 . . gene_id "MSTRG.68251"; transcript_id "MSTRG.68251.1"; exon_number "1"; scaffold_320 StringTie exon 128440 128498 1000 + . gene_id "MSTRG.68263"; transcript_id "MSTRG.68263.1"; exon_number "1"; scaffold_320 StringTie exon 129170 129251 1000 + . gene_id "MSTRG.68263"; transcript_id "MSTRG.68263.1"; exon_number "2"; scaffold_320 StringTie exon 129420 129564 1000 + . gene_id "MSTRG.68263"; transcript_id "MSTRG.68263.1"; exon_number "3"; scaffold_320 StringTie exon 130066 130121 1000 + . gene_id "MSTRG.68263"; transcript_id "MSTRG.68263.1"; exon_number "4"; scaffold_320 StringTie exon 130321 130553 1000 + . gene_id "MSTRG.68263"; transcript_id "MSTRG.68263.1"; exon_number "5"; scaffold_320 StringTie exon 487007 487514 1000 . . gene_id "MSTRG.68280"; transcript_id "MSTRG.68280.1"; exon_number "1"; scaffold_3200 StringTie exon 14767 15066 1000 + . gene_id "MSTRG.68313"; transcript_id "MSTRG.68313.1"; exon_number "1"; scaffold_3200 StringTie exon 34383 34405 1000 + . gene_id "MSTRG.68313"; transcript_id "MSTRG.68313.1"; exon_number "2"; scaffold_3200 StringTie exon 39828 39908 1000 + . gene_id "MSTRG.68315"; transcript_id "MSTRG.68315.1"; exon_number "1"; scaffold_3200 StringTie exon 41736 42390 1000 + . gene_id "MSTRG.68315"; transcript_id "MSTRG.68315.1"; exon_number "2"; scaffold_3200 StringTie exon 41070 41318 1000 . . gene_id "MSTRG.68316"; transcript_id "MSTRG.68316.1"; exon_number "1"; scaffold_3200 StringTie exon 69622 69952 1000 + . gene_id "MSTRG.68323"; transcript_id "MSTRG.68323.1"; exon_number "1"; scaffold_32007 StringTie exon 1 694 1000 . . gene_id "MSTRG.68326"; transcript_id "MSTRG.68326.1"; exon_number "1"; scaffold_3201 StringTie exon 1 205 1000 . . gene_id "MSTRG.68327"; transcript_id "MSTRG.68327.1"; exon_number "1"; scaffold_32013 StringTie exon 3565 3899 1000 . . gene_id "MSTRG.68331"; transcript_id "MSTRG.68331.1"; exon_number "1"; scaffold_3202 StringTie exon 52998 54533 1000 . . gene_id "MSTRG.68340"; transcript_id "MSTRG.68340.1"; exon_number "1"; scaffold_32046 StringTie exon 1876 2114 1000 . . gene_id "MSTRG.68368"; transcript_id "MSTRG.68368.1"; exon_number "1"; scaffold_32081 StringTie exon 27 497 1000 . . gene_id "MSTRG.68405"; transcript_id "MSTRG.68405.1"; exon_number "1"; scaffold_321 StringTie exon 46179 46276 1000 + . gene_id "MSTRG.68416"; transcript_id "MSTRG.68416.2"; exon_number "1"; scaffold_321 StringTie exon 47774 48043 1000 + . gene_id "MSTRG.68416"; transcript_id "MSTRG.68416.2"; exon_number "2"; scaffold_321 StringTie exon 48167 48201 1000 + . gene_id "MSTRG.68416"; transcript_id "MSTRG.68416.2"; exon_number "3"; scaffold_321 StringTie exon 48316 48422 1000 + . gene_id "MSTRG.68416"; transcript_id "MSTRG.68416.2"; exon_number "4"; scaffold_321 StringTie exon 48855 48917 1000 + . gene_id "MSTRG.68416"; transcript_id "MSTRG.68416.2"; exon_number "5"; scaffold_321 StringTie exon 52245 52280 1000 + . gene_id "MSTRG.68416"; transcript_id "MSTRG.68416.2"; exon_number "6"; scaffold_321 StringTie exon 61952 62803 1000 . . gene_id "MSTRG.68418"; transcript_id "MSTRG.68418.1"; exon_number "1"; scaffold_321 StringTie exon 231370 231668 1000 . . gene_id "MSTRG.68439"; transcript_id "MSTRG.68439.1"; exon_number "1"; scaffold_321 StringTie exon 683920 684164 1000 . . gene_id "MSTRG.68462"; transcript_id "MSTRG.68462.1"; exon_number "1"; scaffold_321 StringTie exon 766257 766520 1000 . . gene_id "MSTRG.68468"; transcript_id "MSTRG.68468.1"; exon_number "1"; scaffold_32118 StringTie exon 1711 2061 1000 . . gene_id "MSTRG.68497"; transcript_id "MSTRG.68497.1"; exon_number "1"; scaffold_32152 StringTie exon 1642 1881 1000 . . gene_id "MSTRG.68520"; transcript_id "MSTRG.68520.1"; exon_number "1"; scaffold_32187 StringTie exon 3126 3386 1000 . . gene_id "MSTRG.68544"; transcript_id "MSTRG.68544.1"; exon_number "1"; scaffold_322 StringTie exon 281250 281457 1000 . . gene_id "MSTRG.68582"; transcript_id "MSTRG.68582.1"; exon_number "1"; scaffold_322 StringTie exon 335889 336200 1000 . . gene_id "MSTRG.68589"; transcript_id "MSTRG.68589.1"; exon_number "1"; scaffold_322 StringTie exon 622257 624883 1000 . . gene_id "MSTRG.68623"; transcript_id "MSTRG.68623.1"; exon_number "1"; scaffold_322 StringTie exon 693839 694073 1000 . . gene_id "MSTRG.68630"; transcript_id "MSTRG.68630.1"; exon_number "1"; scaffold_322 StringTie exon 780015 780588 1000 . . gene_id "MSTRG.68636"; transcript_id "MSTRG.68636.1"; exon_number "1"; scaffold_3220 StringTie exon 13041 13110 1000 + . gene_id "MSTRG.68664"; transcript_id "MSTRG.68664.1"; exon_number "1"; scaffold_3220 StringTie exon 13705 13985 1000 + . gene_id "MSTRG.68664"; transcript_id "MSTRG.68664.1"; exon_number "2"; scaffold_3220 StringTie exon 35320 36059 1000 . . gene_id "MSTRG.68665"; transcript_id "MSTRG.68665.1"; exon_number "1"; scaffold_3224 StringTie exon 54351 55774 1000 . . gene_id "MSTRG.68701"; transcript_id "MSTRG.68701.1"; exon_number "1"; scaffold_32244 StringTie exon 1871 3371 1000 . . gene_id "MSTRG.68705"; transcript_id "MSTRG.68705.1"; exon_number "1"; scaffold_32245 StringTie exon 79 174 1000 - . gene_id "MSTRG.68706"; transcript_id "MSTRG.68706.1"; exon_number "1"; scaffold_32245 StringTie exon 534 986 1000 - . gene_id "MSTRG.68706"; transcript_id "MSTRG.68706.1"; exon_number "2"; scaffold_3229 StringTie exon 4216 4435 1000 . . gene_id "MSTRG.68730"; transcript_id "MSTRG.68730.1"; exon_number "1"; scaffold_323 StringTie exon 261661 261898 1000 . . gene_id "MSTRG.68755"; transcript_id "MSTRG.68755.1"; exon_number "1"; scaffold_323 StringTie exon 379820 380192 1000 . . gene_id "MSTRG.68758"; transcript_id "MSTRG.68758.1"; exon_number "1"; scaffold_323 StringTie exon 689792 690389 1000 - . gene_id "MSTRG.68788"; transcript_id "MSTRG.68788.1"; exon_number "1"; scaffold_323 StringTie exon 789097 789385 1000 . . gene_id "MSTRG.68799"; transcript_id "MSTRG.68799.1"; exon_number "1"; scaffold_323 StringTie exon 831923 831970 1000 + . gene_id "MSTRG.68801"; transcript_id "MSTRG.68801.1"; exon_number "1"; scaffold_323 StringTie exon 832900 833413 1000 + . gene_id "MSTRG.68801"; transcript_id "MSTRG.68801.1"; exon_number "2"; scaffold_323 StringTie exon 834222 834273 1000 + . gene_id "MSTRG.68801"; transcript_id "MSTRG.68801.1"; exon_number "3"; scaffold_323 StringTie exon 834375 834570 1000 + . gene_id "MSTRG.68801"; transcript_id "MSTRG.68801.1"; exon_number "4"; scaffold_323 StringTie exon 835828 835980 1000 + . gene_id "MSTRG.68801"; transcript_id "MSTRG.68801.1"; exon_number "5"; scaffold_323 StringTie exon 836096 836267 1000 + . gene_id "MSTRG.68801"; transcript_id "MSTRG.68801.1"; exon_number "6"; scaffold_323 StringTie exon 836704 836804 1000 + . gene_id "MSTRG.68801"; transcript_id "MSTRG.68801.1"; exon_number "7"; scaffold_323 StringTie exon 836967 838420 1000 + . gene_id "MSTRG.68801"; transcript_id "MSTRG.68801.1"; exon_number "8"; scaffold_3230 StringTie exon 62148 62377 1000 . . gene_id "MSTRG.68811"; transcript_id "MSTRG.68811.1"; exon_number "1"; scaffold_32305 StringTie exon 8 560 1000 . . gene_id "MSTRG.68813"; transcript_id "MSTRG.68813.1"; exon_number "1"; scaffold_3231 StringTie exon 42983 43387 1000 . . gene_id "MSTRG.68819"; transcript_id "MSTRG.68819.1"; exon_number "1"; scaffold_3235 StringTie exon 24956 25160 1000 . . gene_id "MSTRG.68852"; transcript_id "MSTRG.68852.1"; exon_number "1"; scaffold_3235 StringTie exon 28308 28369 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "1"; scaffold_3235 StringTie exon 30706 30753 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "2"; scaffold_3235 StringTie exon 31078 31267 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "3"; scaffold_3235 StringTie exon 35690 35775 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "4"; scaffold_3235 StringTie exon 36765 36893 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "5"; scaffold_3235 StringTie exon 37198 37359 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "6"; scaffold_3235 StringTie exon 37746 37883 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "7"; scaffold_3235 StringTie exon 38005 38046 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "8"; scaffold_3235 StringTie exon 38387 38528 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "9"; scaffold_3235 StringTie exon 38890 39012 1000 - . gene_id "MSTRG.68855"; transcript_id "MSTRG.68855.1"; exon_number "10"; scaffold_3236 StringTie exon 16385 17100 1000 . . gene_id "MSTRG.68865"; transcript_id "MSTRG.68865.1"; exon_number "1"; scaffold_3236 StringTie exon 27735 28057 1000 . . gene_id "MSTRG.68869"; transcript_id "MSTRG.68869.1"; exon_number "1"; scaffold_3237 StringTie exon 19596 19942 1000 - . gene_id "MSTRG.68888"; transcript_id "MSTRG.68888.1"; exon_number "1"; scaffold_3238 StringTie exon 52448 52723 1000 . . gene_id "MSTRG.68899"; transcript_id "MSTRG.68899.1"; exon_number "1"; scaffold_324 StringTie exon 67077 67102 1000 + . gene_id "MSTRG.68926"; transcript_id "MSTRG.68926.1"; exon_number "1"; scaffold_324 StringTie exon 67479 67656 1000 + . gene_id "MSTRG.68926"; transcript_id "MSTRG.68926.1"; exon_number "2"; scaffold_324 StringTie exon 824814 824979 1000 + . gene_id "MSTRG.68988"; transcript_id "MSTRG.68988.1"; exon_number "1"; scaffold_324 StringTie exon 825418 825490 1000 + . gene_id "MSTRG.68988"; transcript_id "MSTRG.68988.1"; exon_number "2"; scaffold_324 StringTie exon 826041 826171 1000 + . gene_id "MSTRG.68988"; transcript_id "MSTRG.68988.1"; exon_number "3"; scaffold_324 StringTie exon 826381 826435 1000 + . gene_id "MSTRG.68988"; transcript_id "MSTRG.68988.1"; exon_number "4"; scaffold_324 StringTie exon 826582 826649 1000 + . gene_id "MSTRG.68988"; transcript_id "MSTRG.68988.1"; exon_number "5"; scaffold_324 StringTie exon 826775 827082 1000 + . gene_id "MSTRG.68988"; transcript_id "MSTRG.68988.1"; exon_number "6"; scaffold_3241 StringTie exon 13124 13354 1000 . . gene_id "MSTRG.69008"; transcript_id "MSTRG.69008.1"; exon_number "1"; scaffold_3242 StringTie exon 48465 48768 1000 . . gene_id "MSTRG.69015"; transcript_id "MSTRG.69015.1"; exon_number "1"; scaffold_3244 StringTie exon 5278 5494 1000 . . gene_id "MSTRG.69031"; transcript_id "MSTRG.69031.1"; exon_number "1"; scaffold_32444 StringTie exon 1517 1982 1000 . . gene_id "MSTRG.69040"; transcript_id "MSTRG.69040.1"; exon_number "1"; scaffold_3245 StringTie exon 13372 13802 1000 . . gene_id "MSTRG.69045"; transcript_id "MSTRG.69045.1"; exon_number "1"; scaffold_32454 StringTie exon 2475 2694 1000 . . gene_id "MSTRG.69053"; transcript_id "MSTRG.69053.1"; exon_number "1"; scaffold_32482 StringTie exon 1833 2070 1000 . . gene_id "MSTRG.69085"; transcript_id "MSTRG.69085.1"; exon_number "1"; scaffold_32486 StringTie exon 3689 3970 1000 + . gene_id "MSTRG.69091"; transcript_id "MSTRG.69091.1"; exon_number "1"; scaffold_3249 StringTie exon 25865 26083 1000 - . gene_id "MSTRG.69093"; transcript_id "MSTRG.69093.1"; exon_number "1"; scaffold_325 StringTie exon 1554 1964 1000 . . gene_id "MSTRG.69099"; transcript_id "MSTRG.69099.1"; exon_number "1"; scaffold_325 StringTie exon 354537 354833 1000 . . gene_id "MSTRG.69126"; transcript_id "MSTRG.69126.1"; exon_number "1"; scaffold_325 StringTie exon 484217 484437 1000 . . gene_id "MSTRG.69138"; transcript_id "MSTRG.69138.1"; exon_number "1"; scaffold_325 StringTie exon 597211 597481 1000 . . gene_id "MSTRG.69147"; transcript_id "MSTRG.69147.1"; exon_number "1"; scaffold_325 StringTie exon 687532 689162 1000 - . gene_id "MSTRG.69154"; transcript_id "MSTRG.69154.1"; exon_number "1"; scaffold_325 StringTie exon 689282 689320 1000 - . gene_id "MSTRG.69154"; transcript_id "MSTRG.69154.1"; exon_number "2"; scaffold_32503 StringTie exon 2045 2281 1000 . . gene_id "MSTRG.69182"; transcript_id "MSTRG.69182.1"; exon_number "1"; scaffold_32504 StringTie exon 1112 1277 1000 - . gene_id "MSTRG.69183"; transcript_id "MSTRG.69183.1"; exon_number "1"; scaffold_32504 StringTie exon 1777 1878 1000 - . gene_id "MSTRG.69183"; transcript_id "MSTRG.69183.1"; exon_number "2"; scaffold_32504 StringTie exon 2321 2521 1000 - . gene_id "MSTRG.69183"; transcript_id "MSTRG.69183.1"; exon_number "3"; scaffold_32540 StringTie exon 2697 3007 1000 . . gene_id "MSTRG.69226"; transcript_id "MSTRG.69226.1"; exon_number "1"; scaffold_3256 StringTie exon 2772 2975 1000 . . gene_id "MSTRG.69234"; transcript_id "MSTRG.69234.1"; exon_number "1"; scaffold_326 StringTie exon 164729 164966 1000 . . gene_id "MSTRG.69290"; transcript_id "MSTRG.69290.1"; exon_number "1"; scaffold_326 StringTie exon 417287 417412 1000 - . gene_id "MSTRG.69310"; transcript_id "MSTRG.69310.1"; exon_number "1"; scaffold_326 StringTie exon 417544 417642 1000 - . gene_id "MSTRG.69310"; transcript_id "MSTRG.69310.1"; exon_number "2"; scaffold_326 StringTie exon 484393 484875 1000 - . gene_id "MSTRG.69319"; transcript_id "MSTRG.69319.1"; exon_number "1"; scaffold_326 StringTie exon 485740 485887 1000 - . gene_id "MSTRG.69319"; transcript_id "MSTRG.69319.1"; exon_number "2"; scaffold_326 StringTie exon 486802 487088 1000 - . gene_id "MSTRG.69319"; transcript_id "MSTRG.69319.1"; exon_number "3"; scaffold_326 StringTie exon 487470 487800 1000 - . gene_id "MSTRG.69319"; transcript_id "MSTRG.69319.1"; exon_number "4"; scaffold_326 StringTie exon 487936 488117 1000 - . gene_id "MSTRG.69319"; transcript_id "MSTRG.69319.1"; exon_number "5"; scaffold_326 StringTie exon 488372 488515 1000 - . gene_id "MSTRG.69319"; transcript_id "MSTRG.69319.1"; exon_number "6"; scaffold_326 StringTie exon 488778 488925 1000 - . gene_id "MSTRG.69319"; transcript_id "MSTRG.69319.1"; exon_number "7"; scaffold_326 StringTie exon 533597 533842 1000 . . gene_id "MSTRG.69325"; transcript_id "MSTRG.69325.1"; exon_number "1"; scaffold_326 StringTie exon 873712 874372 1000 . . gene_id "MSTRG.69349"; transcript_id "MSTRG.69349.1"; exon_number "1"; scaffold_32618 StringTie exon 316 703 1000 . . gene_id "MSTRG.69383"; transcript_id "MSTRG.69383.1"; exon_number "1"; scaffold_32684 StringTie exon 277 496 1000 . . gene_id "MSTRG.69440"; transcript_id "MSTRG.69440.1"; exon_number "1"; scaffold_327 StringTie exon 361116 361339 1000 - . gene_id "MSTRG.69458"; transcript_id "MSTRG.69458.1"; exon_number "1"; scaffold_327 StringTie exon 466076 466363 1000 . . gene_id "MSTRG.69469"; transcript_id "MSTRG.69469.1"; exon_number "1"; scaffold_3270 StringTie exon 38479 38553 1000 + . gene_id "MSTRG.69500"; transcript_id "MSTRG.69500.1"; exon_number "1"; scaffold_3270 StringTie exon 39748 39867 1000 + . gene_id "MSTRG.69500"; transcript_id "MSTRG.69500.1"; exon_number "2"; scaffold_3270 StringTie exon 42262 42364 1000 + . gene_id "MSTRG.69500"; transcript_id "MSTRG.69500.1"; exon_number "3"; scaffold_3270 StringTie exon 42591 42640 1000 + . gene_id "MSTRG.69500"; transcript_id "MSTRG.69500.1"; exon_number "4"; scaffold_3271 StringTie exon 18649 18883 1000 . . gene_id "MSTRG.69505"; transcript_id "MSTRG.69505.1"; exon_number "1"; scaffold_3273 StringTie exon 25059 25261 1000 - . gene_id "MSTRG.69525"; transcript_id "MSTRG.69525.1"; exon_number "1"; scaffold_3273 StringTie exon 67235 68499 1000 . . gene_id "MSTRG.69530"; transcript_id "MSTRG.69530.1"; exon_number "1"; scaffold_32748 StringTie exon 1804 1934 1000 - . gene_id "MSTRG.69544"; transcript_id "MSTRG.69544.2"; exon_number "1"; scaffold_32748 StringTie exon 1976 2338 1000 - . gene_id "MSTRG.69544"; transcript_id "MSTRG.69544.2"; exon_number "2"; scaffold_3276 StringTie exon 47582 47868 1000 . . gene_id "MSTRG.69559"; transcript_id "MSTRG.69559.1"; exon_number "1"; scaffold_32770 StringTie exon 2618 2828 1000 . . gene_id "MSTRG.69569"; transcript_id "MSTRG.69569.1"; exon_number "1"; scaffold_32772 StringTie exon 2331 3732 1000 . . gene_id "MSTRG.69571"; transcript_id "MSTRG.69571.1"; exon_number "1"; scaffold_3279 StringTie exon 2780 2979 1000 . . gene_id "MSTRG.69581"; transcript_id "MSTRG.69581.1"; exon_number "1"; scaffold_3279 StringTie exon 47652 47897 1000 . . gene_id "MSTRG.69584"; transcript_id "MSTRG.69584.1"; exon_number "1"; scaffold_328 StringTie exon 507323 507563 1000 + . gene_id "MSTRG.69620"; transcript_id "MSTRG.69620.3"; exon_number "1"; scaffold_328 StringTie exon 507977 508114 1000 + . gene_id "MSTRG.69620"; transcript_id "MSTRG.69620.3"; exon_number "2"; scaffold_328 StringTie exon 508251 508368 1000 + . gene_id "MSTRG.69620"; transcript_id "MSTRG.69620.3"; exon_number "3"; scaffold_328 StringTie exon 510124 510280 1000 + . gene_id "MSTRG.69620"; transcript_id "MSTRG.69620.6"; exon_number "1"; scaffold_328 StringTie exon 510594 510731 1000 + . gene_id "MSTRG.69620"; transcript_id "MSTRG.69620.6"; exon_number "2"; scaffold_328 StringTie exon 511024 511355 1000 + . gene_id "MSTRG.69620"; transcript_id "MSTRG.69620.6"; exon_number "3"; scaffold_328 StringTie exon 754771 755034 1000 . . gene_id "MSTRG.69639"; transcript_id "MSTRG.69639.1"; exon_number "1"; scaffold_328 StringTie exon 875318 875382 1000 - . gene_id "MSTRG.69655"; transcript_id "MSTRG.69655.1"; exon_number "1"; scaffold_328 StringTie exon 875900 875963 1000 - . gene_id "MSTRG.69655"; transcript_id "MSTRG.69655.1"; exon_number "2"; scaffold_328 StringTie exon 876054 876230 1000 - . gene_id "MSTRG.69655"; transcript_id "MSTRG.69655.1"; exon_number "3"; scaffold_328 StringTie exon 876284 876309 1000 - . gene_id "MSTRG.69656"; transcript_id "MSTRG.69656.1"; exon_number "1"; scaffold_328 StringTie exon 876395 876528 1000 - . gene_id "MSTRG.69656"; transcript_id "MSTRG.69656.1"; exon_number "2"; scaffold_328 StringTie exon 876677 876770 1000 - . gene_id "MSTRG.69656"; transcript_id "MSTRG.69656.1"; exon_number "3"; scaffold_32809 StringTie exon 3353 3822 1000 . . gene_id "MSTRG.69672"; transcript_id "MSTRG.69672.1"; exon_number "1"; scaffold_32829 StringTie exon 2887 3151 1000 . . gene_id "MSTRG.69694"; transcript_id "MSTRG.69694.1"; exon_number "1"; scaffold_3287 StringTie exon 55519 55888 1000 . . gene_id "MSTRG.69735"; transcript_id "MSTRG.69735.1"; exon_number "1"; scaffold_329 StringTie exon 156848 157070 1000 . . gene_id "MSTRG.69762"; transcript_id "MSTRG.69762.1"; exon_number "1"; scaffold_329 StringTie exon 179439 179458 1000 + . gene_id "MSTRG.69765"; transcript_id "MSTRG.69765.1"; exon_number "1"; scaffold_329 StringTie exon 179545 179674 1000 + . gene_id "MSTRG.69765"; transcript_id "MSTRG.69765.1"; exon_number "2"; scaffold_329 StringTie exon 180377 180439 1000 + . gene_id "MSTRG.69765"; transcript_id "MSTRG.69765.1"; exon_number "3"; scaffold_329 StringTie exon 180541 180605 1000 + . gene_id "MSTRG.69765"; transcript_id "MSTRG.69765.1"; exon_number "4"; scaffold_329 StringTie exon 184213 184413 1000 + . gene_id "MSTRG.69765"; transcript_id "MSTRG.69765.1"; exon_number "5"; scaffold_329 StringTie exon 192353 193236 1000 + . gene_id "MSTRG.69765"; transcript_id "MSTRG.69765.1"; exon_number "6"; scaffold_329 StringTie exon 549901 551294 1000 . . gene_id "MSTRG.69789"; transcript_id "MSTRG.69789.1"; exon_number "1"; scaffold_329 StringTie exon 624072 624089 1000 + . gene_id "MSTRG.69793"; transcript_id "MSTRG.69793.1"; exon_number "1"; scaffold_329 StringTie exon 625892 626960 1000 + . gene_id "MSTRG.69793"; transcript_id "MSTRG.69793.1"; exon_number "2"; scaffold_329 StringTie exon 694757 695075 1000 . . gene_id "MSTRG.69800"; transcript_id "MSTRG.69800.1"; exon_number "1"; scaffold_3291 StringTie exon 19340 19894 1000 . . gene_id "MSTRG.69823"; transcript_id "MSTRG.69823.1"; exon_number "1"; scaffold_3294 StringTie exon 43092 43318 1000 . . gene_id "MSTRG.69852"; transcript_id "MSTRG.69852.1"; exon_number "1"; scaffold_3294 StringTie exon 66776 67095 1000 . . gene_id "MSTRG.69854"; transcript_id "MSTRG.69854.1"; exon_number "1"; scaffold_32954 StringTie exon 3431 3695 1000 . . gene_id "MSTRG.69866"; transcript_id "MSTRG.69866.1"; exon_number "1"; scaffold_3296 StringTie exon 4930 6174 1000 . . gene_id "MSTRG.69867"; transcript_id "MSTRG.69867.1"; exon_number "1"; scaffold_32983 StringTie exon 266 557 1000 . . gene_id "MSTRG.69885"; transcript_id "MSTRG.69885.1"; exon_number "1"; scaffold_33 StringTie exon 454606 454922 1000 . . gene_id "MSTRG.69921"; transcript_id "MSTRG.69921.1"; exon_number "1"; scaffold_33 StringTie exon 762470 762772 1000 . . gene_id "MSTRG.69939"; transcript_id "MSTRG.69939.1"; exon_number "1"; scaffold_33 StringTie exon 1383644 1383979 1000 . . gene_id "MSTRG.69959"; transcript_id "MSTRG.69959.1"; exon_number "1"; scaffold_33 StringTie exon 1577255 1577510 1000 . . gene_id "MSTRG.69978"; transcript_id "MSTRG.69978.1"; exon_number "1"; scaffold_33 StringTie exon 1798733 1799222 1000 . . gene_id "MSTRG.69994"; transcript_id "MSTRG.69994.1"; exon_number "1"; scaffold_33 StringTie exon 1969076 1969338 1000 . . gene_id "MSTRG.70012"; transcript_id "MSTRG.70012.1"; exon_number "1"; scaffold_33 StringTie exon 2201048 2201279 1000 . . gene_id "MSTRG.70027"; transcript_id "MSTRG.70027.1"; exon_number "1"; scaffold_330 StringTie exon 68538 68873 1000 + . gene_id "MSTRG.70059"; transcript_id "MSTRG.70059.1"; exon_number "1"; scaffold_330 StringTie exon 69350 69398 1000 + . gene_id "MSTRG.70059"; transcript_id "MSTRG.70059.1"; exon_number "2"; scaffold_330 StringTie exon 69663 70016 1000 + . gene_id "MSTRG.70059"; transcript_id "MSTRG.70059.1"; exon_number "3"; scaffold_330 StringTie exon 121854 122238 1000 . . gene_id "MSTRG.70068"; transcript_id "MSTRG.70068.1"; exon_number "1"; scaffold_330 StringTie exon 572008 572885 1000 . . gene_id "MSTRG.70098"; transcript_id "MSTRG.70098.1"; exon_number "1"; scaffold_330 StringTie exon 830364 830947 1000 . . gene_id "MSTRG.70112"; transcript_id "MSTRG.70112.1"; exon_number "1"; scaffold_3300 StringTie exon 18568 18811 1000 . . gene_id "MSTRG.70114"; transcript_id "MSTRG.70114.1"; exon_number "1"; scaffold_3303 StringTie exon 53679 53969 1000 . . gene_id "MSTRG.70148"; transcript_id "MSTRG.70148.1"; exon_number "1"; scaffold_3305 StringTie exon 32206 32405 1000 . . gene_id "MSTRG.70160"; transcript_id "MSTRG.70160.1"; exon_number "1"; scaffold_33077 StringTie exon 1122 1228 1000 + . gene_id "MSTRG.70182"; transcript_id "MSTRG.70182.1"; exon_number "1"; scaffold_33077 StringTie exon 1369 1511 1000 + . gene_id "MSTRG.70182"; transcript_id "MSTRG.70182.1"; exon_number "2"; scaffold_33077 StringTie exon 1657 1746 1000 + . gene_id "MSTRG.70182"; transcript_id "MSTRG.70182.1"; exon_number "3"; scaffold_33077 StringTie exon 1883 2232 1000 + . gene_id "MSTRG.70182"; transcript_id "MSTRG.70182.1"; exon_number "4"; scaffold_331 StringTie exon 133849 134048 1000 . . gene_id "MSTRG.70213"; transcript_id "MSTRG.70213.1"; exon_number "1"; scaffold_33115 StringTie exon 1988 2241 1000 . . gene_id "MSTRG.70263"; transcript_id "MSTRG.70263.1"; exon_number "1"; scaffold_3312 StringTie exon 1114 1465 1000 + . gene_id "MSTRG.70267"; transcript_id "MSTRG.70267.1"; exon_number "1"; scaffold_3312 StringTie exon 3682 3748 1000 + . gene_id "MSTRG.70267"; transcript_id "MSTRG.70267.1"; exon_number "2"; scaffold_3312 StringTie exon 65135 65703 1000 + . gene_id "MSTRG.70275"; transcript_id "MSTRG.70275.1"; exon_number "1"; scaffold_3312 StringTie exon 66253 66391 1000 + . gene_id "MSTRG.70275"; transcript_id "MSTRG.70275.1"; exon_number "2"; scaffold_3312 StringTie exon 66595 66825 1000 + . gene_id "MSTRG.70275"; transcript_id "MSTRG.70275.1"; exon_number "3"; scaffold_3312 StringTie exon 67122 67209 1000 + . gene_id "MSTRG.70275"; transcript_id "MSTRG.70275.1"; exon_number "4"; scaffold_3312 StringTie exon 67491 67579 1000 + . gene_id "MSTRG.70275"; transcript_id "MSTRG.70275.1"; exon_number "5"; scaffold_3313 StringTie exon 7904 8137 1000 . . gene_id "MSTRG.70280"; transcript_id "MSTRG.70280.1"; exon_number "1"; scaffold_3317 StringTie exon 590 791 1000 . . gene_id "MSTRG.70311"; transcript_id "MSTRG.70311.1"; exon_number "1"; scaffold_3318 StringTie exon 2862 3105 1000 . . gene_id "MSTRG.70317"; transcript_id "MSTRG.70317.1"; exon_number "1"; scaffold_33189 StringTie exon 1122 1300 1000 - . gene_id "MSTRG.70334"; transcript_id "MSTRG.70334.2"; exon_number "1"; scaffold_33189 StringTie exon 1562 1758 1000 - . gene_id "MSTRG.70334"; transcript_id "MSTRG.70334.2"; exon_number "2"; scaffold_332 StringTie exon 65623 65860 1000 . . gene_id "MSTRG.70346"; transcript_id "MSTRG.70346.1"; exon_number "1"; scaffold_332 StringTie exon 139908 139972 1000 + . gene_id "MSTRG.70360"; transcript_id "MSTRG.70360.1"; exon_number "1"; scaffold_332 StringTie exon 140070 140247 1000 + . gene_id "MSTRG.70360"; transcript_id "MSTRG.70360.1"; exon_number "2"; scaffold_332 StringTie exon 141011 141123 1000 + . gene_id "MSTRG.70360"; transcript_id "MSTRG.70360.1"; exon_number "3"; scaffold_332 StringTie exon 145281 145435 1000 + . gene_id "MSTRG.70360"; transcript_id "MSTRG.70360.1"; exon_number "4"; scaffold_332 StringTie exon 146541 146711 1000 + . gene_id "MSTRG.70360"; transcript_id "MSTRG.70360.1"; exon_number "5"; scaffold_332 StringTie exon 147513 147690 1000 + . gene_id "MSTRG.70360"; transcript_id "MSTRG.70360.1"; exon_number "6"; scaffold_332 StringTie exon 292512 292715 1000 . . gene_id "MSTRG.70371"; transcript_id "MSTRG.70371.1"; exon_number "1"; scaffold_332 StringTie exon 304333 304567 1000 . . gene_id "MSTRG.70372"; transcript_id "MSTRG.70372.1"; exon_number "1"; scaffold_332 StringTie exon 348760 349000 1000 . . gene_id "MSTRG.70380"; transcript_id "MSTRG.70380.1"; exon_number "1"; scaffold_332 StringTie exon 452877 453148 1000 . . gene_id "MSTRG.70384"; transcript_id "MSTRG.70384.1"; exon_number "1"; scaffold_332 StringTie exon 498224 498448 1000 . . gene_id "MSTRG.70388"; transcript_id "MSTRG.70388.1"; exon_number "1"; scaffold_33239 StringTie exon 2963 3106 1000 - . gene_id "MSTRG.70458"; transcript_id "MSTRG.70458.1"; exon_number "1"; scaffold_33239 StringTie exon 3214 3323 1000 - . gene_id "MSTRG.70458"; transcript_id "MSTRG.70458.1"; exon_number "2"; scaffold_33239 StringTie exon 3646 3683 1000 - . gene_id "MSTRG.70458"; transcript_id "MSTRG.70458.1"; exon_number "3"; scaffold_3325 StringTie exon 16668 18583 1000 . . gene_id "MSTRG.70463"; transcript_id "MSTRG.70463.1"; exon_number "1"; scaffold_3325 StringTie exon 45747 46376 1000 - . gene_id "MSTRG.70474"; transcript_id "MSTRG.70474.1"; exon_number "1"; scaffold_3325 StringTie exon 51776 51926 1000 - . gene_id "MSTRG.70474"; transcript_id "MSTRG.70474.1"; exon_number "2"; scaffold_3326 StringTie exon 43332 43712 1000 . . gene_id "MSTRG.70494"; transcript_id "MSTRG.70494.1"; exon_number "1"; scaffold_33264 StringTie exon 1579 1778 1000 . . gene_id "MSTRG.70497"; transcript_id "MSTRG.70497.1"; exon_number "1"; scaffold_333 StringTie exon 29455 29487 1000 - . gene_id "MSTRG.70532"; transcript_id "MSTRG.70532.1"; exon_number "1"; scaffold_333 StringTie exon 29710 29789 1000 - . gene_id "MSTRG.70532"; transcript_id "MSTRG.70532.1"; exon_number "2"; scaffold_333 StringTie exon 30230 30399 1000 - . gene_id "MSTRG.70532"; transcript_id "MSTRG.70532.1"; exon_number "3"; scaffold_333 StringTie exon 115602 117559 1000 + . gene_id "MSTRG.70540"; transcript_id "MSTRG.70540.1"; exon_number "1"; scaffold_333 StringTie exon 121475 121507 1000 + . gene_id "MSTRG.70540"; transcript_id "MSTRG.70540.1"; exon_number "2"; scaffold_333 StringTie exon 368426 368662 1000 . . gene_id "MSTRG.70561"; transcript_id "MSTRG.70561.1"; exon_number "1"; scaffold_333 StringTie exon 530759 531008 1000 - . gene_id "MSTRG.70567"; transcript_id "MSTRG.70567.1"; exon_number "1"; scaffold_333 StringTie exon 532030 532151 1000 - . gene_id "MSTRG.70567"; transcript_id "MSTRG.70567.1"; exon_number "2"; scaffold_333 StringTie exon 538380 538688 1000 . . gene_id "MSTRG.70568"; transcript_id "MSTRG.70568.1"; exon_number "1"; scaffold_333 StringTie exon 699319 699528 1000 . . gene_id "MSTRG.70579"; transcript_id "MSTRG.70579.1"; exon_number "1"; scaffold_333 StringTie exon 825735 826078 1000 . . gene_id "MSTRG.70585"; transcript_id "MSTRG.70585.1"; exon_number "1"; scaffold_3330 StringTie exon 15567 15789 1000 . . gene_id "MSTRG.70596"; transcript_id "MSTRG.70596.1"; exon_number "1"; scaffold_33338 StringTie exon 466 898 1000 . . gene_id "MSTRG.70616"; transcript_id "MSTRG.70616.1"; exon_number "1"; scaffold_3336 StringTie exon 45352 45563 1000 . . gene_id "MSTRG.70638"; transcript_id "MSTRG.70638.1"; exon_number "1"; scaffold_33388 StringTie exon 2081 2348 1000 . . gene_id "MSTRG.70666"; transcript_id "MSTRG.70666.1"; exon_number "1"; scaffold_334 StringTie exon 209547 210075 1000 . . gene_id "MSTRG.70682"; transcript_id "MSTRG.70682.1"; exon_number "1"; scaffold_334 StringTie exon 737597 737846 1000 . . gene_id "MSTRG.70697"; transcript_id "MSTRG.70697.1"; exon_number "1"; scaffold_334 StringTie exon 841111 841129 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "1"; scaffold_334 StringTie exon 841245 841308 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "2"; scaffold_334 StringTie exon 841414 841530 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "3"; scaffold_334 StringTie exon 841645 841724 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "4"; scaffold_334 StringTie exon 841895 842028 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "5"; scaffold_334 StringTie exon 842121 842206 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "6"; scaffold_334 StringTie exon 842358 842455 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "7"; scaffold_334 StringTie exon 842602 842743 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "8"; scaffold_334 StringTie exon 842984 843100 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "9"; scaffold_334 StringTie exon 845064 845143 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "10"; scaffold_334 StringTie exon 846573 846612 1000 + . gene_id "MSTRG.70714"; transcript_id "MSTRG.70714.1"; exon_number "11"; scaffold_334 StringTie exon 861350 861593 1000 . . gene_id "MSTRG.70715"; transcript_id "MSTRG.70715.1"; exon_number "1"; scaffold_334 StringTie exon 870066 870277 1000 . . gene_id "MSTRG.70717"; transcript_id "MSTRG.70717.1"; exon_number "1"; scaffold_33417 StringTie exon 2466 2668 1000 . . gene_id "MSTRG.70742"; transcript_id "MSTRG.70742.1"; exon_number "1"; scaffold_3342 StringTie exon 16197 16440 1000 - . gene_id "MSTRG.70746"; transcript_id "MSTRG.70746.1"; exon_number "1"; scaffold_3342 StringTie exon 41243 41408 1000 - . gene_id "MSTRG.70746"; transcript_id "MSTRG.70746.1"; exon_number "2"; scaffold_3346 StringTie exon 11387 12268 1000 - . gene_id "MSTRG.70776"; transcript_id "MSTRG.70776.1"; exon_number "1"; scaffold_3346 StringTie exon 66257 66458 1000 . . gene_id "MSTRG.70782"; transcript_id "MSTRG.70782.1"; exon_number "1"; scaffold_33484 StringTie exon 224 462 1000 . . gene_id "MSTRG.70805"; transcript_id "MSTRG.70805.1"; exon_number "1"; scaffold_33488 StringTie exon 3117 3670 1000 . . gene_id "MSTRG.70809"; transcript_id "MSTRG.70809.1"; exon_number "1"; scaffold_335 StringTie exon 366120 366419 1000 . . gene_id "MSTRG.70845"; transcript_id "MSTRG.70845.1"; exon_number "1"; scaffold_335 StringTie exon 858990 859704 1000 . . gene_id "MSTRG.70871"; transcript_id "MSTRG.70871.1"; exon_number "1"; scaffold_3351 StringTie exon 15149 15389 1000 . . gene_id "MSTRG.70887"; transcript_id "MSTRG.70887.1"; exon_number "1"; scaffold_33527 StringTie exon 2471 2514 1000 - . gene_id "MSTRG.70896"; transcript_id "MSTRG.70896.1"; exon_number "1"; scaffold_33527 StringTie exon 3038 3204 1000 - . gene_id "MSTRG.70896"; transcript_id "MSTRG.70896.1"; exon_number "2"; scaffold_3353 StringTie exon 5945 6042 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "1"; scaffold_3353 StringTie exon 14859 15004 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "2"; scaffold_3353 StringTie exon 15312 15435 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "3"; scaffold_3353 StringTie exon 15618 15772 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "4"; scaffold_3353 StringTie exon 15871 16039 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "5"; scaffold_3353 StringTie exon 16781 16931 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "6"; scaffold_3353 StringTie exon 17088 17224 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "7"; scaffold_3353 StringTie exon 17318 17493 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "8"; scaffold_3353 StringTie exon 17609 17803 1000 - . gene_id "MSTRG.70900"; transcript_id "MSTRG.70900.1"; exon_number "9"; scaffold_336 StringTie exon 266591 266645 1000 + . gene_id "MSTRG.70978"; transcript_id "MSTRG.70978.1"; exon_number "1"; scaffold_336 StringTie exon 266747 266874 1000 + . gene_id "MSTRG.70978"; transcript_id "MSTRG.70978.1"; exon_number "2"; scaffold_336 StringTie exon 267395 267473 1000 + . gene_id "MSTRG.70978"; transcript_id "MSTRG.70978.1"; exon_number "3"; scaffold_336 StringTie exon 267569 267578 1000 + . gene_id "MSTRG.70978"; transcript_id "MSTRG.70978.1"; exon_number "4"; scaffold_336 StringTie exon 755155 755369 1000 . . gene_id "MSTRG.71012"; transcript_id "MSTRG.71012.1"; exon_number "1"; scaffold_33631 StringTie exon 61 354 1000 . . gene_id "MSTRG.71067"; transcript_id "MSTRG.71067.1"; exon_number "1"; scaffold_3366 StringTie exon 1348 1466 1000 - . gene_id "MSTRG.71086"; transcript_id "MSTRG.71086.1"; exon_number "1"; scaffold_3366 StringTie exon 2022 2169 1000 - . gene_id "MSTRG.71086"; transcript_id "MSTRG.71086.1"; exon_number "2"; scaffold_33673 StringTie exon 1552 1752 1000 . . gene_id "MSTRG.71101"; transcript_id "MSTRG.71101.1"; exon_number "1"; scaffold_3369 StringTie exon 15556 15811 1000 - . gene_id "MSTRG.71124"; transcript_id "MSTRG.71124.1"; exon_number "1"; scaffold_3369 StringTie exon 16985 17167 1000 - . gene_id "MSTRG.71124"; transcript_id "MSTRG.71124.1"; exon_number "2"; scaffold_3369 StringTie exon 24757 24873 1000 - . gene_id "MSTRG.71124"; transcript_id "MSTRG.71124.1"; exon_number "3"; scaffold_3369 StringTie exon 50428 50762 1000 - . gene_id "MSTRG.71124"; transcript_id "MSTRG.71124.1"; exon_number "4"; scaffold_337 StringTie exon 168643 168918 1000 . . gene_id "MSTRG.71139"; transcript_id "MSTRG.71139.1"; exon_number "1"; scaffold_337 StringTie exon 174520 174853 1000 . . gene_id "MSTRG.71140"; transcript_id "MSTRG.71140.1"; exon_number "1"; scaffold_337 StringTie exon 512589 512801 1000 . . gene_id "MSTRG.71161"; transcript_id "MSTRG.71161.1"; exon_number "1"; scaffold_337 StringTie exon 725284 725343 1000 + . gene_id "MSTRG.71178"; transcript_id "MSTRG.71178.1"; exon_number "1"; scaffold_337 StringTie exon 725453 725561 1000 + . gene_id "MSTRG.71178"; transcript_id "MSTRG.71178.1"; exon_number "2"; scaffold_337 StringTie exon 725725 725809 1000 + . gene_id "MSTRG.71178"; transcript_id "MSTRG.71178.1"; exon_number "3"; scaffold_33716 StringTie exon 1 240 1000 . . gene_id "MSTRG.71204"; transcript_id "MSTRG.71204.1"; exon_number "1"; scaffold_3372 StringTie exon 45134 45468 1000 . . gene_id "MSTRG.71212"; transcript_id "MSTRG.71212.1"; exon_number "1"; scaffold_3373 StringTie exon 9943 10215 1000 + . gene_id "MSTRG.71218"; transcript_id "MSTRG.71218.1"; exon_number "1"; scaffold_338 StringTie exon 152783 153259 1000 . . gene_id "MSTRG.71281"; transcript_id "MSTRG.71281.1"; exon_number "1"; scaffold_338 StringTie exon 393382 393593 1000 . . gene_id "MSTRG.71294"; transcript_id "MSTRG.71294.1"; exon_number "1"; scaffold_338 StringTie exon 719628 719873 1000 . . gene_id "MSTRG.71318"; transcript_id "MSTRG.71318.1"; exon_number "1"; scaffold_33805 StringTie exon 2691 3755 1000 . . gene_id "MSTRG.71350"; transcript_id "MSTRG.71350.1"; exon_number "1"; scaffold_33836 StringTie exon 186 543 1000 . . gene_id "MSTRG.71379"; transcript_id "MSTRG.71379.1"; exon_number "1"; scaffold_3384 StringTie exon 826 1056 1000 . . gene_id "MSTRG.71381"; transcript_id "MSTRG.71381.1"; exon_number "1"; scaffold_339 StringTie exon 158461 158490 1000 + . gene_id "MSTRG.71424"; transcript_id "MSTRG.71424.1"; exon_number "1"; scaffold_339 StringTie exon 158645 158753 1000 + . gene_id "MSTRG.71424"; transcript_id "MSTRG.71424.1"; exon_number "2"; scaffold_339 StringTie exon 158933 159100 1000 + . gene_id "MSTRG.71424"; transcript_id "MSTRG.71424.1"; exon_number "3"; scaffold_339 StringTie exon 159289 159374 1000 + . gene_id "MSTRG.71424"; transcript_id "MSTRG.71424.1"; exon_number "4"; scaffold_339 StringTie exon 159566 159663 1000 + . gene_id "MSTRG.71424"; transcript_id "MSTRG.71424.1"; exon_number "5"; scaffold_339 StringTie exon 160678 160730 1000 + . gene_id "MSTRG.71424"; transcript_id "MSTRG.71424.1"; exon_number "6"; scaffold_339 StringTie exon 160752 160808 1000 + . gene_id "MSTRG.71425"; transcript_id "MSTRG.71425.1"; exon_number "1"; scaffold_339 StringTie exon 161309 161382 1000 + . gene_id "MSTRG.71425"; transcript_id "MSTRG.71425.1"; exon_number "2"; scaffold_339 StringTie exon 162044 162115 1000 + . gene_id "MSTRG.71425"; transcript_id "MSTRG.71425.1"; exon_number "3"; scaffold_339 StringTie exon 290439 290656 1000 . . gene_id "MSTRG.71435"; transcript_id "MSTRG.71435.1"; exon_number "1"; scaffold_339 StringTie exon 418509 418728 1000 + . gene_id "MSTRG.71450"; transcript_id "MSTRG.71450.1"; exon_number "1"; scaffold_339 StringTie exon 418824 418908 1000 + . gene_id "MSTRG.71450"; transcript_id "MSTRG.71450.1"; exon_number "2"; scaffold_339 StringTie exon 419815 420231 1000 + . gene_id "MSTRG.71451"; transcript_id "MSTRG.71451.1"; exon_number "1"; scaffold_339 StringTie exon 824238 824524 1000 . . gene_id "MSTRG.71470"; transcript_id "MSTRG.71470.1"; exon_number "1"; scaffold_339 StringTie exon 897144 897450 1000 . . gene_id "MSTRG.71478"; transcript_id "MSTRG.71478.1"; exon_number "1"; scaffold_339 StringTie exon 942898 943103 1000 . . gene_id "MSTRG.71479"; transcript_id "MSTRG.71479.1"; exon_number "1"; scaffold_3390 StringTie exon 8046 8163 1000 - . gene_id "MSTRG.71482"; transcript_id "MSTRG.71482.1"; exon_number "1"; scaffold_3390 StringTie exon 8949 9231 1000 - . gene_id "MSTRG.71482"; transcript_id "MSTRG.71482.1"; exon_number "2"; scaffold_3390 StringTie exon 12235 12444 1000 . . gene_id "MSTRG.71483"; transcript_id "MSTRG.71483.1"; exon_number "1"; scaffold_3391 StringTie exon 109 398 1000 . . gene_id "MSTRG.71490"; transcript_id "MSTRG.71490.1"; exon_number "1"; scaffold_3394 StringTie exon 633 907 1000 . . gene_id "MSTRG.71508"; transcript_id "MSTRG.71508.1"; exon_number "1"; scaffold_33992 StringTie exon 2558 2871 1000 . . gene_id "MSTRG.71564"; transcript_id "MSTRG.71564.1"; exon_number "1"; scaffold_34 StringTie exon 500673 500706 1000 - . gene_id "MSTRG.71614"; transcript_id "MSTRG.71614.1"; exon_number "1"; scaffold_34 StringTie exon 501062 501368 1000 - . gene_id "MSTRG.71614"; transcript_id "MSTRG.71614.1"; exon_number "2"; scaffold_34 StringTie exon 881490 881789 1000 . . gene_id "MSTRG.71638"; transcript_id "MSTRG.71638.1"; exon_number "1"; scaffold_34 StringTie exon 1495593 1495855 1000 . . gene_id "MSTRG.71676"; transcript_id "MSTRG.71676.1"; exon_number "1"; scaffold_34 StringTie exon 1727400 1727627 1000 . . gene_id "MSTRG.71699"; transcript_id "MSTRG.71699.1"; exon_number "1"; scaffold_34 StringTie exon 1817294 1817608 1000 . . gene_id "MSTRG.71703"; transcript_id "MSTRG.71703.1"; exon_number "1"; scaffold_340 StringTie exon 391503 391754 1000 . . gene_id "MSTRG.71748"; transcript_id "MSTRG.71748.1"; exon_number "1"; scaffold_340 StringTie exon 685976 686219 1000 + . gene_id "MSTRG.71767"; transcript_id "MSTRG.71767.1"; exon_number "1"; scaffold_340 StringTie exon 686457 686502 1000 + . gene_id "MSTRG.71767"; transcript_id "MSTRG.71767.1"; exon_number "2"; scaffold_340 StringTie exon 932773 933049 1000 . . gene_id "MSTRG.71781"; transcript_id "MSTRG.71781.1"; exon_number "1"; scaffold_3406 StringTie exon 1235 1288 1000 - . gene_id "MSTRG.71833"; transcript_id "MSTRG.71833.1"; exon_number "1"; scaffold_3406 StringTie exon 40393 40588 1000 - . gene_id "MSTRG.71833"; transcript_id "MSTRG.71833.1"; exon_number "2"; scaffold_34070 StringTie exon 13 131 1000 - . gene_id "MSTRG.71849"; transcript_id "MSTRG.71849.1"; exon_number "1"; scaffold_34070 StringTie exon 456 612 1000 - . gene_id "MSTRG.71849"; transcript_id "MSTRG.71849.1"; exon_number "2"; scaffold_34070 StringTie exon 821 967 1000 - . gene_id "MSTRG.71849"; transcript_id "MSTRG.71849.1"; exon_number "3"; scaffold_34070 StringTie exon 1693 1920 1000 - . gene_id "MSTRG.71849"; transcript_id "MSTRG.71849.1"; exon_number "4"; scaffold_34070 StringTie exon 2054 2106 1000 - . gene_id "MSTRG.71849"; transcript_id "MSTRG.71849.1"; exon_number "5"; scaffold_34094 StringTie exon 640 1495 1000 . . gene_id "MSTRG.71874"; transcript_id "MSTRG.71874.1"; exon_number "1"; scaffold_341 StringTie exon 52548 52826 1000 . . gene_id "MSTRG.71878"; transcript_id "MSTRG.71878.1"; exon_number "1"; scaffold_341 StringTie exon 67876 68197 1000 . . gene_id "MSTRG.71880"; transcript_id "MSTRG.71880.1"; exon_number "1"; scaffold_341 StringTie exon 218572 218838 1000 . . gene_id "MSTRG.71888"; transcript_id "MSTRG.71888.1"; exon_number "1"; scaffold_341 StringTie exon 248607 249260 1000 . . gene_id "MSTRG.71890"; transcript_id "MSTRG.71890.1"; exon_number "1"; scaffold_341 StringTie exon 390358 390740 1000 . . gene_id "MSTRG.71900"; transcript_id "MSTRG.71900.1"; exon_number "1"; scaffold_341 StringTie exon 479719 479950 1000 . . gene_id "MSTRG.71907"; transcript_id "MSTRG.71907.1"; exon_number "1"; scaffold_341 StringTie exon 571437 573398 1000 . . gene_id "MSTRG.71920"; transcript_id "MSTRG.71920.1"; exon_number "1"; scaffold_341 StringTie exon 860536 860879 1000 . . gene_id "MSTRG.71936"; transcript_id "MSTRG.71936.1"; exon_number "1"; scaffold_3410 StringTie exon 10503 10839 1000 . . gene_id "MSTRG.71945"; transcript_id "MSTRG.71945.1"; exon_number "1"; scaffold_34109 StringTie exon 1792 2165 1000 . . gene_id "MSTRG.71952"; transcript_id "MSTRG.71952.1"; exon_number "1"; scaffold_34110 StringTie exon 2704 2949 1000 . . gene_id "MSTRG.71959"; transcript_id "MSTRG.71959.1"; exon_number "1"; scaffold_3412 StringTie exon 4377 4498 1000 - . gene_id "MSTRG.71966"; transcript_id "MSTRG.71966.1"; exon_number "1"; scaffold_3412 StringTie exon 4863 5042 1000 - . gene_id "MSTRG.71966"; transcript_id "MSTRG.71966.1"; exon_number "2"; scaffold_3412 StringTie exon 5272 5285 1000 - . gene_id "MSTRG.71966"; transcript_id "MSTRG.71966.1"; exon_number "3"; scaffold_3415 StringTie exon 14953 15173 1000 . . gene_id "MSTRG.72002"; transcript_id "MSTRG.72002.1"; exon_number "1"; scaffold_34180 StringTie exon 1226 1471 1000 . . gene_id "MSTRG.72020"; transcript_id "MSTRG.72020.1"; exon_number "1"; scaffold_34186 StringTie exon 2730 3084 1000 . . gene_id "MSTRG.72024"; transcript_id "MSTRG.72024.1"; exon_number "1"; scaffold_342 StringTie exon 80160 80402 1000 . . gene_id "MSTRG.72050"; transcript_id "MSTRG.72050.1"; exon_number "1"; scaffold_342 StringTie exon 668182 668291 1000 - . gene_id "MSTRG.72075"; transcript_id "MSTRG.72075.1"; exon_number "1"; scaffold_342 StringTie exon 670679 670814 1000 - . gene_id "MSTRG.72075"; transcript_id "MSTRG.72075.1"; exon_number "2"; scaffold_342 StringTie exon 670984 671093 1000 - . gene_id "MSTRG.72075"; transcript_id "MSTRG.72075.1"; exon_number "3"; scaffold_342 StringTie exon 672339 672428 1000 - . gene_id "MSTRG.72075"; transcript_id "MSTRG.72075.1"; exon_number "4"; scaffold_342 StringTie exon 672641 672752 1000 - . gene_id "MSTRG.72075"; transcript_id "MSTRG.72075.1"; exon_number "5"; scaffold_342 StringTie exon 673026 673187 1000 - . gene_id "MSTRG.72075"; transcript_id "MSTRG.72075.1"; exon_number "6"; scaffold_342 StringTie exon 675945 676006 1000 - . gene_id "MSTRG.72075"; transcript_id "MSTRG.72075.1"; exon_number "7"; scaffold_342 StringTie exon 719126 719189 1000 - . gene_id "MSTRG.72079"; transcript_id "MSTRG.72079.1"; exon_number "1"; scaffold_342 StringTie exon 719457 719575 1000 - . gene_id "MSTRG.72079"; transcript_id "MSTRG.72079.1"; exon_number "2"; scaffold_342 StringTie exon 720353 720497 1000 - . gene_id "MSTRG.72079"; transcript_id "MSTRG.72079.1"; exon_number "3"; scaffold_342 StringTie exon 724814 724948 1000 - . gene_id "MSTRG.72079"; transcript_id "MSTRG.72079.1"; exon_number "4"; scaffold_342 StringTie exon 725125 725184 1000 - . gene_id "MSTRG.72079"; transcript_id "MSTRG.72079.1"; exon_number "5"; scaffold_342 StringTie exon 725470 725733 1000 - . gene_id "MSTRG.72079"; transcript_id "MSTRG.72079.1"; exon_number "6"; scaffold_3426 StringTie exon 20436 20502 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "1"; scaffold_3426 StringTie exon 29049 29239 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "2"; scaffold_3426 StringTie exon 30455 30587 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "3"; scaffold_3426 StringTie exon 33339 33507 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "4"; scaffold_3426 StringTie exon 35372 35468 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "5"; scaffold_3426 StringTie exon 36223 36384 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "6"; scaffold_3426 StringTie exon 38533 38719 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "7"; scaffold_3426 StringTie exon 40017 40212 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "8"; scaffold_3426 StringTie exon 42172 42286 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "9"; scaffold_3426 StringTie exon 44516 44541 1000 - . gene_id "MSTRG.72125"; transcript_id "MSTRG.72125.3"; exon_number "10"; scaffold_34276 StringTie exon 2358 2615 1000 . . gene_id "MSTRG.72144"; transcript_id "MSTRG.72144.1"; exon_number "1"; scaffold_343 StringTie exon 206920 207039 1000 - . gene_id "MSTRG.72181"; transcript_id "MSTRG.72181.1"; exon_number "1"; scaffold_343 StringTie exon 207192 207531 1000 - . gene_id "MSTRG.72181"; transcript_id "MSTRG.72181.1"; exon_number "2"; scaffold_343 StringTie exon 207742 208012 1000 - . gene_id "MSTRG.72181"; transcript_id "MSTRG.72181.1"; exon_number "3"; scaffold_343 StringTie exon 252011 252268 1000 . . gene_id "MSTRG.72189"; transcript_id "MSTRG.72189.1"; exon_number "1"; scaffold_343 StringTie exon 480322 480530 1000 + . gene_id "MSTRG.72208"; transcript_id "MSTRG.72208.1"; exon_number "1"; scaffold_343 StringTie exon 483368 483504 1000 + . gene_id "MSTRG.72208"; transcript_id "MSTRG.72208.1"; exon_number "2"; scaffold_343 StringTie exon 536332 536635 1000 . . gene_id "MSTRG.72217"; transcript_id "MSTRG.72217.1"; exon_number "1"; scaffold_343 StringTie exon 878090 878828 1000 . . gene_id "MSTRG.72240"; transcript_id "MSTRG.72240.1"; exon_number "1"; scaffold_343 StringTie exon 881888 882302 1000 . . gene_id "MSTRG.72242"; transcript_id "MSTRG.72242.1"; exon_number "1"; scaffold_3430 StringTie exon 40369 40764 1000 + . gene_id "MSTRG.72247"; transcript_id "MSTRG.72247.1"; exon_number "1"; scaffold_3432 StringTie exon 62807 63081 1000 . . gene_id "MSTRG.72259"; transcript_id "MSTRG.72259.1"; exon_number "1"; scaffold_3434 StringTie exon 33509 34361 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "1"; scaffold_3434 StringTie exon 34472 34644 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "2"; scaffold_3434 StringTie exon 34978 35068 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "3"; scaffold_3434 StringTie exon 38836 38943 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "4"; scaffold_3434 StringTie exon 46318 46414 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "5"; scaffold_3434 StringTie exon 46600 46619 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "6"; scaffold_3434 StringTie exon 47323 47351 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "7"; scaffold_3434 StringTie exon 50828 50881 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "8"; scaffold_3434 StringTie exon 51790 51860 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "9"; scaffold_3434 StringTie exon 57382 57451 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "10"; scaffold_3434 StringTie exon 57687 57777 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "11"; scaffold_3434 StringTie exon 58406 58451 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "12"; scaffold_3434 StringTie exon 58543 58652 1000 - . gene_id "MSTRG.72275"; transcript_id "MSTRG.72275.1"; exon_number "13"; scaffold_3437 StringTie exon 39970 40177 1000 . . gene_id "MSTRG.72304"; transcript_id "MSTRG.72304.1"; exon_number "1"; scaffold_344 StringTie exon 10089 10299 1000 + . gene_id "MSTRG.72328"; transcript_id "MSTRG.72328.2"; exon_number "1"; scaffold_344 StringTie exon 10504 10636 1000 + . gene_id "MSTRG.72328"; transcript_id "MSTRG.72328.2"; exon_number "2"; scaffold_344 StringTie exon 10868 11074 1000 + . gene_id "MSTRG.72328"; transcript_id "MSTRG.72328.2"; exon_number "3"; scaffold_344 StringTie exon 11194 11357 1000 + . gene_id "MSTRG.72328"; transcript_id "MSTRG.72328.2"; exon_number "4"; scaffold_344 StringTie exon 11544 12152 1000 + . gene_id "MSTRG.72328"; transcript_id "MSTRG.72328.2"; exon_number "5"; scaffold_344 StringTie exon 24120 24205 1000 - . gene_id "MSTRG.72331"; transcript_id "MSTRG.72331.1"; exon_number "1"; scaffold_344 StringTie exon 24524 24666 1000 - . gene_id "MSTRG.72331"; transcript_id "MSTRG.72331.1"; exon_number "2"; scaffold_344 StringTie exon 25719 25861 1000 - . gene_id "MSTRG.72331"; transcript_id "MSTRG.72331.1"; exon_number "3"; scaffold_344 StringTie exon 26825 26863 1000 - . gene_id "MSTRG.72331"; transcript_id "MSTRG.72331.1"; exon_number "4"; scaffold_344 StringTie exon 26987 27121 1000 - . gene_id "MSTRG.72331"; transcript_id "MSTRG.72331.1"; exon_number "5"; scaffold_344 StringTie exon 25149 25353 1000 . . gene_id "MSTRG.72332"; transcript_id "MSTRG.72332.1"; exon_number "1"; scaffold_344 StringTie exon 395607 396275 1000 . . gene_id "MSTRG.72361"; transcript_id "MSTRG.72361.1"; exon_number "1"; scaffold_344 StringTie exon 401949 402232 1000 . . gene_id "MSTRG.72362"; transcript_id "MSTRG.72362.1"; exon_number "1"; scaffold_344 StringTie exon 469244 469599 1000 . . gene_id "MSTRG.72366"; transcript_id "MSTRG.72366.1"; exon_number "1"; scaffold_344 StringTie exon 568927 569157 1000 . . gene_id "MSTRG.72373"; transcript_id "MSTRG.72373.1"; exon_number "1"; scaffold_34402 StringTie exon 1082 1713 1000 . . gene_id "MSTRG.72410"; transcript_id "MSTRG.72410.1"; exon_number "1"; scaffold_34425 StringTie exon 1 308 1000 . . gene_id "MSTRG.72426"; transcript_id "MSTRG.72426.1"; exon_number "1"; scaffold_3443 StringTie exon 12265 12933 1000 . . gene_id "MSTRG.72430"; transcript_id "MSTRG.72430.1"; exon_number "1"; scaffold_34445 StringTie exon 535 619 1000 - . gene_id "MSTRG.72450"; transcript_id "MSTRG.72450.1"; exon_number "1"; scaffold_34445 StringTie exon 714 1057 1000 - . gene_id "MSTRG.72450"; transcript_id "MSTRG.72450.1"; exon_number "2"; scaffold_3447 StringTie exon 53294 53579 1000 . . gene_id "MSTRG.72478"; transcript_id "MSTRG.72478.1"; exon_number "1"; scaffold_34471 StringTie exon 105 186 1000 - . gene_id "MSTRG.72481"; transcript_id "MSTRG.72481.1"; exon_number "1"; scaffold_34471 StringTie exon 304 482 1000 - . gene_id "MSTRG.72481"; transcript_id "MSTRG.72481.1"; exon_number "2"; scaffold_34471 StringTie exon 1517 1618 1000 - . gene_id "MSTRG.72481"; transcript_id "MSTRG.72481.1"; exon_number "3"; scaffold_34491 StringTie exon 1 1299 1000 . . gene_id "MSTRG.72503"; transcript_id "MSTRG.72503.1"; exon_number "1"; scaffold_345 StringTie exon 130399 130741 1000 . . gene_id "MSTRG.72515"; transcript_id "MSTRG.72515.1"; exon_number "1"; scaffold_345 StringTie exon 139952 140195 1000 . . gene_id "MSTRG.72516"; transcript_id "MSTRG.72516.1"; exon_number "1"; scaffold_345 StringTie exon 517465 517675 1000 . . gene_id "MSTRG.72532"; transcript_id "MSTRG.72532.1"; exon_number "1"; scaffold_34502 StringTie exon 1656 1822 1000 + . gene_id "MSTRG.72571"; transcript_id "MSTRG.72571.1"; exon_number "1"; scaffold_34502 StringTie exon 1916 2022 1000 + . gene_id "MSTRG.72571"; transcript_id "MSTRG.72571.1"; exon_number "2"; scaffold_34502 StringTie exon 2116 2145 1000 + . gene_id "MSTRG.72571"; transcript_id "MSTRG.72571.1"; exon_number "3"; scaffold_34502 StringTie exon 2270 2409 1000 + . gene_id "MSTRG.72571"; transcript_id "MSTRG.72571.1"; exon_number "4"; scaffold_34502 StringTie exon 3047 3710 1000 + . gene_id "MSTRG.72571"; transcript_id "MSTRG.72571.1"; exon_number "5"; scaffold_3452 StringTie exon 40933 41453 1000 . . gene_id "MSTRG.72585"; transcript_id "MSTRG.72585.1"; exon_number "1"; scaffold_3458 StringTie exon 21343 21556 1000 . . gene_id "MSTRG.72637"; transcript_id "MSTRG.72637.1"; exon_number "1"; scaffold_34594 StringTie exon 2436 2666 1000 . . gene_id "MSTRG.72648"; transcript_id "MSTRG.72648.1"; exon_number "1"; scaffold_346 StringTie exon 90866 91878 1000 . . gene_id "MSTRG.72662"; transcript_id "MSTRG.72662.1"; exon_number "1"; scaffold_346 StringTie exon 136242 136657 1000 . . gene_id "MSTRG.72672"; transcript_id "MSTRG.72672.1"; exon_number "1"; scaffold_346 StringTie exon 287676 287944 1000 . . gene_id "MSTRG.72684"; transcript_id "MSTRG.72684.1"; exon_number "1"; scaffold_346 StringTie exon 391827 392164 1000 . . gene_id "MSTRG.72691"; transcript_id "MSTRG.72691.1"; exon_number "1"; scaffold_346 StringTie exon 864189 864428 1000 + . gene_id "MSTRG.72708"; transcript_id "MSTRG.72708.1"; exon_number "1"; scaffold_346 StringTie exon 865646 865810 1000 + . gene_id "MSTRG.72708"; transcript_id "MSTRG.72708.1"; exon_number "2"; scaffold_346 StringTie exon 866010 866138 1000 + . gene_id "MSTRG.72708"; transcript_id "MSTRG.72708.1"; exon_number "3"; scaffold_346 StringTie exon 866384 866495 1000 + . gene_id "MSTRG.72708"; transcript_id "MSTRG.72708.1"; exon_number "4"; scaffold_346 StringTie exon 866709 866856 1000 + . gene_id "MSTRG.72708"; transcript_id "MSTRG.72708.1"; exon_number "5"; scaffold_346 StringTie exon 874159 874283 1000 + . gene_id "MSTRG.72708"; transcript_id "MSTRG.72708.1"; exon_number "6"; scaffold_3464 StringTie exon 37242 37316 1000 + . gene_id "MSTRG.72744"; transcript_id "MSTRG.72744.1"; exon_number "1"; scaffold_3464 StringTie exon 37483 37557 1000 + . gene_id "MSTRG.72744"; transcript_id "MSTRG.72744.1"; exon_number "2"; scaffold_3464 StringTie exon 39091 39188 1000 + . gene_id "MSTRG.72744"; transcript_id "MSTRG.72744.1"; exon_number "3"; scaffold_3464 StringTie exon 39865 39985 1000 + . gene_id "MSTRG.72744"; transcript_id "MSTRG.72744.1"; exon_number "4"; scaffold_3465 StringTie exon 62232 62513 1000 . . gene_id "MSTRG.72761"; transcript_id "MSTRG.72761.1"; exon_number "1"; scaffold_3466 StringTie exon 32740 32975 1000 . . gene_id "MSTRG.72765"; transcript_id "MSTRG.72765.1"; exon_number "1"; scaffold_34661 StringTie exon 1796 2098 1000 . . gene_id "MSTRG.72769"; transcript_id "MSTRG.72769.1"; exon_number "1"; scaffold_3467 StringTie exon 22212 22418 1000 . . gene_id "MSTRG.72775"; transcript_id "MSTRG.72775.1"; exon_number "1"; scaffold_3467 StringTie exon 40927 41348 1000 . . gene_id "MSTRG.72780"; transcript_id "MSTRG.72780.1"; exon_number "1"; scaffold_34688 StringTie exon 1634 2030 1000 . . gene_id "MSTRG.72791"; transcript_id "MSTRG.72791.1"; exon_number "1"; scaffold_34699 StringTie exon 2167 2423 1000 . . gene_id "MSTRG.72798"; transcript_id "MSTRG.72798.1"; exon_number "1"; scaffold_347 StringTie exon 177272 177554 1000 . . gene_id "MSTRG.72808"; transcript_id "MSTRG.72808.1"; exon_number "1"; scaffold_347 StringTie exon 317363 317415 1000 + . gene_id "MSTRG.72821"; transcript_id "MSTRG.72821.1"; exon_number "1"; scaffold_347 StringTie exon 317542 317738 1000 + . gene_id "MSTRG.72821"; transcript_id "MSTRG.72821.1"; exon_number "2"; scaffold_347 StringTie exon 317865 317939 1000 + . gene_id "MSTRG.72821"; transcript_id "MSTRG.72821.1"; exon_number "3"; scaffold_347 StringTie exon 332689 336401 1000 . . gene_id "MSTRG.72824"; transcript_id "MSTRG.72824.1"; exon_number "1"; scaffold_347 StringTie exon 521411 521429 1000 - . gene_id "MSTRG.72846"; transcript_id "MSTRG.72846.1"; exon_number "1"; scaffold_347 StringTie exon 573766 573987 1000 - . gene_id "MSTRG.72846"; transcript_id "MSTRG.72846.1"; exon_number "2"; scaffold_347 StringTie exon 591774 591902 1000 - . gene_id "MSTRG.72851"; transcript_id "MSTRG.72851.1"; exon_number "1"; scaffold_347 StringTie exon 602969 603144 1000 - . gene_id "MSTRG.72851"; transcript_id "MSTRG.72851.1"; exon_number "2"; scaffold_347 StringTie exon 603441 603591 1000 - . gene_id "MSTRG.72851"; transcript_id "MSTRG.72851.1"; exon_number "3"; scaffold_347 StringTie exon 610666 610835 1000 - . gene_id "MSTRG.72851"; transcript_id "MSTRG.72851.1"; exon_number "4"; scaffold_347 StringTie exon 611813 611964 1000 - . gene_id "MSTRG.72851"; transcript_id "MSTRG.72851.1"; exon_number "5"; scaffold_347 StringTie exon 615003 615025 1000 - . gene_id "MSTRG.72851"; transcript_id "MSTRG.72851.1"; exon_number "6"; scaffold_347 StringTie exon 827980 828289 1000 . . gene_id "MSTRG.72860"; transcript_id "MSTRG.72860.1"; exon_number "1"; scaffold_3473 StringTie exon 1818 1925 1000 - . gene_id "MSTRG.72903"; transcript_id "MSTRG.72903.1"; exon_number "1"; scaffold_3473 StringTie exon 2031 2130 1000 - . gene_id "MSTRG.72903"; transcript_id "MSTRG.72903.1"; exon_number "2"; scaffold_3473 StringTie exon 2448 2511 1000 - . gene_id "MSTRG.72903"; transcript_id "MSTRG.72903.1"; exon_number "3"; scaffold_3473 StringTie exon 63033 63065 1000 + . gene_id "MSTRG.72909"; transcript_id "MSTRG.72909.1"; exon_number "1"; scaffold_3473 StringTie exon 63202 63423 1000 + . gene_id "MSTRG.72909"; transcript_id "MSTRG.72909.1"; exon_number "2"; scaffold_3473 StringTie exon 63674 63765 1000 + . gene_id "MSTRG.72909"; transcript_id "MSTRG.72909.1"; exon_number "3"; scaffold_3473 StringTie exon 64070 64200 1000 + . gene_id "MSTRG.72909"; transcript_id "MSTRG.72909.1"; exon_number "4"; scaffold_3473 StringTie exon 64395 64670 1000 + . gene_id "MSTRG.72909"; transcript_id "MSTRG.72909.1"; exon_number "5"; scaffold_34736 StringTie exon 1078 1369 1000 . . gene_id "MSTRG.72910"; transcript_id "MSTRG.72910.1"; exon_number "1"; scaffold_3478 StringTie exon 34346 34683 1000 . . gene_id "MSTRG.72951"; transcript_id "MSTRG.72951.1"; exon_number "1"; scaffold_34798 StringTie exon 2956 3529 1000 . . gene_id "MSTRG.72968"; transcript_id "MSTRG.72968.1"; exon_number "1"; scaffold_348 StringTie exon 29023 29359 1000 . . gene_id "MSTRG.72970"; transcript_id "MSTRG.72970.1"; exon_number "1"; scaffold_348 StringTie exon 421750 422040 1000 . . gene_id "MSTRG.73001"; transcript_id "MSTRG.73001.1"; exon_number "1"; scaffold_348 StringTie exon 718716 719319 1000 . . gene_id "MSTRG.73014"; transcript_id "MSTRG.73014.1"; exon_number "1"; scaffold_3483 StringTie exon 1784 2178 1000 . . gene_id "MSTRG.73057"; transcript_id "MSTRG.73057.1"; exon_number "1"; scaffold_3483 StringTie exon 56161 56754 1000 . . gene_id "MSTRG.73067"; transcript_id "MSTRG.73067.1"; exon_number "1"; scaffold_34834 StringTie exon 437 640 1000 . . gene_id "MSTRG.73070"; transcript_id "MSTRG.73070.1"; exon_number "1"; scaffold_3484 StringTie exon 29780 30085 1000 . . gene_id "MSTRG.73077"; transcript_id "MSTRG.73077.1"; exon_number "1"; scaffold_3485 StringTie exon 9359 9569 1000 . . gene_id "MSTRG.73081"; transcript_id "MSTRG.73081.1"; exon_number "1"; scaffold_34860 StringTie exon 1876 2100 1000 . . gene_id "MSTRG.73097"; transcript_id "MSTRG.73097.1"; exon_number "1"; scaffold_349 StringTie exon 556378 556387 1000 - . gene_id "MSTRG.73168"; transcript_id "MSTRG.73168.1"; exon_number "1"; scaffold_349 StringTie exon 559461 559595 1000 - . gene_id "MSTRG.73168"; transcript_id "MSTRG.73168.1"; exon_number "2"; scaffold_349 StringTie exon 560115 560293 1000 - . gene_id "MSTRG.73168"; transcript_id "MSTRG.73168.1"; exon_number "3"; scaffold_349 StringTie exon 761279 761514 1000 . . gene_id "MSTRG.73189"; transcript_id "MSTRG.73189.1"; exon_number "1"; scaffold_34933 StringTie exon 2115 2496 1000 . . gene_id "MSTRG.73241"; transcript_id "MSTRG.73241.1"; exon_number "1"; scaffold_34953 StringTie exon 1917 2257 1000 . . gene_id "MSTRG.73255"; transcript_id "MSTRG.73255.1"; exon_number "1"; scaffold_34969 StringTie exon 529 730 1000 . . gene_id "MSTRG.73264"; transcript_id "MSTRG.73264.1"; exon_number "1"; scaffold_3498 StringTie exon 48161 48376 1000 . . gene_id "MSTRG.73279"; transcript_id "MSTRG.73279.1"; exon_number "1"; scaffold_34986 StringTie exon 2025 2239 1000 . . gene_id "MSTRG.73284"; transcript_id "MSTRG.73284.1"; exon_number "1"; scaffold_35 StringTie exon 102942 103678 1000 . . gene_id "MSTRG.73300"; transcript_id "MSTRG.73300.1"; exon_number "1"; scaffold_35 StringTie exon 595577 595786 1000 . . gene_id "MSTRG.73318"; transcript_id "MSTRG.73318.1"; exon_number "1"; scaffold_35 StringTie exon 974027 974095 1000 + . gene_id "MSTRG.73328"; transcript_id "MSTRG.73328.1"; exon_number "1"; scaffold_35 StringTie exon 975917 975985 1000 + . gene_id "MSTRG.73328"; transcript_id "MSTRG.73328.1"; exon_number "2"; scaffold_35 StringTie exon 976497 976663 1000 + . gene_id "MSTRG.73328"; transcript_id "MSTRG.73328.1"; exon_number "3"; scaffold_35 StringTie exon 980973 981045 1000 + . gene_id "MSTRG.73328"; transcript_id "MSTRG.73328.1"; exon_number "4"; scaffold_35 StringTie exon 1125215 1125450 1000 . . gene_id "MSTRG.73342"; transcript_id "MSTRG.73342.1"; exon_number "1"; scaffold_35 StringTie exon 1262613 1263027 1000 . . gene_id "MSTRG.73348"; transcript_id "MSTRG.73348.1"; exon_number "1"; scaffold_35 StringTie exon 2114662 2114972 1000 . . gene_id "MSTRG.73382"; transcript_id "MSTRG.73382.1"; exon_number "1"; scaffold_350 StringTie exon 67113 67342 1000 + . gene_id "MSTRG.73401"; transcript_id "MSTRG.73401.1"; exon_number "1"; scaffold_350 StringTie exon 67431 67445 1000 + . gene_id "MSTRG.73401"; transcript_id "MSTRG.73401.1"; exon_number "2"; scaffold_350 StringTie exon 640943 641503 1000 . . gene_id "MSTRG.73437"; transcript_id "MSTRG.73437.1"; exon_number "1"; scaffold_350 StringTie exon 832062 832263 1000 + . gene_id "MSTRG.73452"; transcript_id "MSTRG.73452.1"; exon_number "1"; scaffold_350 StringTie exon 837851 837985 1000 + . gene_id "MSTRG.73452"; transcript_id "MSTRG.73452.1"; exon_number "2"; scaffold_350 StringTie exon 841843 841955 1000 + . gene_id "MSTRG.73452"; transcript_id "MSTRG.73452.1"; exon_number "3"; scaffold_350 StringTie exon 844084 844221 1000 + . gene_id "MSTRG.73452"; transcript_id "MSTRG.73452.1"; exon_number "4"; scaffold_350 StringTie exon 844948 845050 1000 + . gene_id "MSTRG.73452"; transcript_id "MSTRG.73452.1"; exon_number "5"; scaffold_350 StringTie exon 845993 846093 1000 + . gene_id "MSTRG.73452"; transcript_id "MSTRG.73452.1"; exon_number "6"; scaffold_350 StringTie exon 846536 846706 1000 + . gene_id "MSTRG.73452"; transcript_id "MSTRG.73452.1"; exon_number "7"; scaffold_350 StringTie exon 846961 847491 1000 + . gene_id "MSTRG.73452"; transcript_id "MSTRG.73452.1"; exon_number "8"; scaffold_350 StringTie exon 889598 889934 1000 . . gene_id "MSTRG.73454"; transcript_id "MSTRG.73454.1"; exon_number "1"; scaffold_350 StringTie exon 895987 896208 1000 . . gene_id "MSTRG.73455"; transcript_id "MSTRG.73455.1"; exon_number "1"; scaffold_35019 StringTie exon 560 1276 1000 . . gene_id "MSTRG.73469"; transcript_id "MSTRG.73469.1"; exon_number "1"; scaffold_3503 StringTie exon 8172 9032 1000 . . gene_id "MSTRG.73480"; transcript_id "MSTRG.73480.1"; exon_number "1"; scaffold_3504 StringTie exon 22755 22774 1000 + . gene_id "MSTRG.73492"; transcript_id "MSTRG.73492.1"; exon_number "1"; scaffold_3504 StringTie exon 34041 34159 1000 + . gene_id "MSTRG.73492"; transcript_id "MSTRG.73492.1"; exon_number "2"; scaffold_3504 StringTie exon 34395 34570 1000 + . gene_id "MSTRG.73492"; transcript_id "MSTRG.73492.1"; exon_number "3"; scaffold_3505 StringTie exon 35514 35629 1000 + . gene_id "MSTRG.73504"; transcript_id "MSTRG.73504.1"; exon_number "1"; scaffold_3505 StringTie exon 36475 36586 1000 + . gene_id "MSTRG.73504"; transcript_id "MSTRG.73504.1"; exon_number "2"; scaffold_35058 StringTie exon 1849 2299 1000 + . gene_id "MSTRG.73512"; transcript_id "MSTRG.73512.1"; exon_number "1"; scaffold_35058 StringTie exon 2968 3010 1000 + . gene_id "MSTRG.73512"; transcript_id "MSTRG.73512.1"; exon_number "2"; scaffold_3506 StringTie exon 57629 57961 1000 . . gene_id "MSTRG.73515"; transcript_id "MSTRG.73515.1"; exon_number "1"; scaffold_35060 StringTie exon 664 919 1000 . . gene_id "MSTRG.73516"; transcript_id "MSTRG.73516.1"; exon_number "1"; scaffold_35063 StringTie exon 2262 2772 1000 . . gene_id "MSTRG.73520"; transcript_id "MSTRG.73520.1"; exon_number "1"; scaffold_35065 StringTie exon 1211 1390 1000 - . gene_id "MSTRG.73521"; transcript_id "MSTRG.73521.1"; exon_number "1"; scaffold_35065 StringTie exon 1675 1753 1000 - . gene_id "MSTRG.73521"; transcript_id "MSTRG.73521.1"; exon_number "2"; scaffold_3509 StringTie exon 30843 31177 1000 . . gene_id "MSTRG.73547"; transcript_id "MSTRG.73547.1"; exon_number "1"; scaffold_3509 StringTie exon 38558 38853 1000 . . gene_id "MSTRG.73548"; transcript_id "MSTRG.73548.1"; exon_number "1"; scaffold_35099 StringTie exon 471 964 1000 . . gene_id "MSTRG.73553"; transcript_id "MSTRG.73553.1"; exon_number "1"; scaffold_351 StringTie exon 222355 223154 1000 . . gene_id "MSTRG.73570"; transcript_id "MSTRG.73570.1"; exon_number "1"; scaffold_35183 StringTie exon 2699 3681 1000 . . gene_id "MSTRG.73645"; transcript_id "MSTRG.73645.1"; exon_number "1"; scaffold_3519 StringTie exon 915 1300 1000 . . gene_id "MSTRG.73647"; transcript_id "MSTRG.73647.1"; exon_number "1"; scaffold_3519 StringTie exon 28768 28978 1000 + . gene_id "MSTRG.73652"; transcript_id "MSTRG.73652.1"; exon_number "1"; scaffold_3519 StringTie exon 29445 29492 1000 + . gene_id "MSTRG.73652"; transcript_id "MSTRG.73652.1"; exon_number "2"; scaffold_3519 StringTie exon 30675 30808 1000 + . gene_id "MSTRG.73652"; transcript_id "MSTRG.73652.1"; exon_number "3"; scaffold_3519 StringTie exon 31358 32131 1000 + . gene_id "MSTRG.73652"; transcript_id "MSTRG.73652.1"; exon_number "4"; scaffold_352 StringTie exon 228580 228790 1000 . . gene_id "MSTRG.73679"; transcript_id "MSTRG.73679.1"; exon_number "1"; scaffold_352 StringTie exon 248381 248458 1000 + . gene_id "MSTRG.73681"; transcript_id "MSTRG.73681.1"; exon_number "1"; scaffold_352 StringTie exon 248550 248625 1000 + . gene_id "MSTRG.73681"; transcript_id "MSTRG.73681.1"; exon_number "2"; scaffold_352 StringTie exon 248796 248921 1000 + . gene_id "MSTRG.73681"; transcript_id "MSTRG.73681.1"; exon_number "3"; scaffold_352 StringTie exon 249317 249338 1000 + . gene_id "MSTRG.73681"; transcript_id "MSTRG.73681.1"; exon_number "4"; scaffold_352 StringTie exon 275737 276127 1000 . . gene_id "MSTRG.73687"; transcript_id "MSTRG.73687.1"; exon_number "1"; scaffold_352 StringTie exon 661611 661899 1000 . . gene_id "MSTRG.73717"; transcript_id "MSTRG.73717.1"; exon_number "1"; scaffold_35201 StringTie exon 801 1015 1000 . . gene_id "MSTRG.73743"; transcript_id "MSTRG.73743.1"; exon_number "1"; scaffold_3521 StringTie exon 33594 33660 1000 + . gene_id "MSTRG.73752"; transcript_id "MSTRG.73752.1"; exon_number "1"; scaffold_3521 StringTie exon 33850 33951 1000 + . gene_id "MSTRG.73752"; transcript_id "MSTRG.73752.1"; exon_number "2"; scaffold_3521 StringTie exon 34323 34394 1000 + . gene_id "MSTRG.73752"; transcript_id "MSTRG.73752.1"; exon_number "3"; scaffold_3521 StringTie exon 35310 35367 1000 + . gene_id "MSTRG.73752"; transcript_id "MSTRG.73752.1"; exon_number "4"; scaffold_35220 StringTie exon 3163 3389 1000 . . gene_id "MSTRG.73763"; transcript_id "MSTRG.73763.1"; exon_number "1"; scaffold_35239 StringTie exon 2424 3685 1000 . . gene_id "MSTRG.73771"; transcript_id "MSTRG.73771.1"; exon_number "1"; scaffold_35249 StringTie exon 1855 2084 1000 . . gene_id "MSTRG.73778"; transcript_id "MSTRG.73778.1"; exon_number "1"; scaffold_35275 StringTie exon 2704 3162 1000 . . gene_id "MSTRG.73797"; transcript_id "MSTRG.73797.1"; exon_number "1"; scaffold_353 StringTie exon 110404 110673 1000 . . gene_id "MSTRG.73818"; transcript_id "MSTRG.73818.1"; exon_number "1"; scaffold_353 StringTie exon 243061 243324 1000 - . gene_id "MSTRG.73834"; transcript_id "MSTRG.73834.2"; exon_number "1"; scaffold_353 StringTie exon 247013 247187 1000 - . gene_id "MSTRG.73834"; transcript_id "MSTRG.73834.2"; exon_number "2"; scaffold_353 StringTie exon 318042 318268 1000 . . gene_id "MSTRG.73838"; transcript_id "MSTRG.73838.1"; exon_number "1"; scaffold_353 StringTie exon 677023 677255 1000 . . gene_id "MSTRG.73854"; transcript_id "MSTRG.73854.1"; exon_number "1"; scaffold_35323 StringTie exon 3433 3674 1000 . . gene_id "MSTRG.73901"; transcript_id "MSTRG.73901.1"; exon_number "1"; scaffold_3533 StringTie exon 28263 28471 1000 . . gene_id "MSTRG.73904"; transcript_id "MSTRG.73904.1"; exon_number "1"; scaffold_35331 StringTie exon 2058 2158 1000 - . gene_id "MSTRG.73907"; transcript_id "MSTRG.73907.1"; exon_number "1"; scaffold_35331 StringTie exon 2749 3233 1000 - . gene_id "MSTRG.73907"; transcript_id "MSTRG.73907.1"; exon_number "2"; scaffold_3535 StringTie exon 3308 3661 1000 . . gene_id "MSTRG.73924"; transcript_id "MSTRG.73924.1"; exon_number "1"; scaffold_35355 StringTie exon 2191 2427 1000 . . gene_id "MSTRG.73933"; transcript_id "MSTRG.73933.1"; exon_number "1"; scaffold_3536 StringTie exon 28935 28958 1000 + . gene_id "MSTRG.73941"; transcript_id "MSTRG.73941.2"; exon_number "1"; scaffold_3536 StringTie exon 29080 29175 1000 + . gene_id "MSTRG.73941"; transcript_id "MSTRG.73941.2"; exon_number "2"; scaffold_3536 StringTie exon 30857 30946 1000 + . gene_id "MSTRG.73941"; transcript_id "MSTRG.73941.2"; exon_number "3"; scaffold_3536 StringTie exon 32897 32986 1000 + . gene_id "MSTRG.73941"; transcript_id "MSTRG.73941.2"; exon_number "4"; scaffold_3536 StringTie exon 39219 39362 1000 + . gene_id "MSTRG.73941"; transcript_id "MSTRG.73941.2"; exon_number "5"; scaffold_3536 StringTie exon 60824 61197 1000 . . gene_id "MSTRG.73943"; transcript_id "MSTRG.73943.1"; exon_number "1"; scaffold_3538 StringTie exon 51694 51778 1000 + . gene_id "MSTRG.73958"; transcript_id "MSTRG.73958.1"; exon_number "1"; scaffold_3538 StringTie exon 52444 52467 1000 + . gene_id "MSTRG.73958"; transcript_id "MSTRG.73958.1"; exon_number "2"; scaffold_3538 StringTie exon 53304 54621 1000 + . gene_id "MSTRG.73958"; transcript_id "MSTRG.73958.1"; exon_number "3"; scaffold_3539 StringTie exon 20099 20209 1000 - . gene_id "MSTRG.73963"; transcript_id "MSTRG.73963.1"; exon_number "1"; scaffold_3539 StringTie exon 20835 21007 1000 - . gene_id "MSTRG.73963"; transcript_id "MSTRG.73963.1"; exon_number "2"; scaffold_3539 StringTie exon 39448 39670 1000 . . gene_id "MSTRG.73966"; transcript_id "MSTRG.73966.1"; exon_number "1"; scaffold_354 StringTie exon 765 877 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "1"; scaffold_354 StringTie exon 967 1041 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "2"; scaffold_354 StringTie exon 1611 1663 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "3"; scaffold_354 StringTie exon 2808 2982 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "4"; scaffold_354 StringTie exon 16453 16587 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "5"; scaffold_354 StringTie exon 16881 16976 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "6"; scaffold_354 StringTie exon 19365 19434 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "7"; scaffold_354 StringTie exon 20252 20334 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "8"; scaffold_354 StringTie exon 24782 24871 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "9"; scaffold_354 StringTie exon 35348 35464 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "10"; scaffold_354 StringTie exon 97754 98287 1000 - . gene_id "MSTRG.73970"; transcript_id "MSTRG.73970.1"; exon_number "11"; scaffold_354 StringTie exon 434240 434505 1000 . . gene_id "MSTRG.73997"; transcript_id "MSTRG.73997.1"; exon_number "1"; scaffold_354 StringTie exon 652950 653197 1000 . . gene_id "MSTRG.74015"; transcript_id "MSTRG.74015.1"; exon_number "1"; scaffold_3542 StringTie exon 15868 16116 1000 + . gene_id "MSTRG.74044"; transcript_id "MSTRG.74044.1"; exon_number "1"; scaffold_3542 StringTie exon 16516 16609 1000 + . gene_id "MSTRG.74044"; transcript_id "MSTRG.74044.1"; exon_number "2"; scaffold_3542 StringTie exon 46949 47217 1000 . . gene_id "MSTRG.74045"; transcript_id "MSTRG.74045.1"; exon_number "1"; scaffold_3546 StringTie exon 1331 2089 1000 . . gene_id "MSTRG.74069"; transcript_id "MSTRG.74069.1"; exon_number "1"; scaffold_355 StringTie exon 148072 148304 1000 . . gene_id "MSTRG.74106"; transcript_id "MSTRG.74106.1"; exon_number "1"; scaffold_355 StringTie exon 618672 618750 1000 + . gene_id "MSTRG.74128"; transcript_id "MSTRG.74128.1"; exon_number "1"; scaffold_355 StringTie exon 618838 618968 1000 + . gene_id "MSTRG.74128"; transcript_id "MSTRG.74128.1"; exon_number "2"; scaffold_355 StringTie exon 709143 709303 1000 + . gene_id "MSTRG.74133"; transcript_id "MSTRG.74133.1"; exon_number "1"; scaffold_355 StringTie exon 709589 709909 1000 + . gene_id "MSTRG.74133"; transcript_id "MSTRG.74133.1"; exon_number "2"; scaffold_35515 StringTie exon 1299 1700 1000 . . gene_id "MSTRG.74168"; transcript_id "MSTRG.74168.1"; exon_number "1"; scaffold_3555 StringTie exon 42362 42459 1000 + . gene_id "MSTRG.74202"; transcript_id "MSTRG.74202.1"; exon_number "1"; scaffold_3555 StringTie exon 46293 46404 1000 + . gene_id "MSTRG.74202"; transcript_id "MSTRG.74202.1"; exon_number "2"; scaffold_3555 StringTie exon 46629 46679 1000 + . gene_id "MSTRG.74202"; transcript_id "MSTRG.74202.1"; exon_number "3"; scaffold_3555 StringTie exon 46816 46891 1000 + . gene_id "MSTRG.74202"; transcript_id "MSTRG.74202.1"; exon_number "4"; scaffold_3555 StringTie exon 47379 47526 1000 + . gene_id "MSTRG.74202"; transcript_id "MSTRG.74202.1"; exon_number "5"; scaffold_3555 StringTie exon 49864 49899 1000 + . gene_id "MSTRG.74202"; transcript_id "MSTRG.74202.1"; exon_number "6"; scaffold_3556 StringTie exon 15491 15860 1000 . . gene_id "MSTRG.74210"; transcript_id "MSTRG.74210.1"; exon_number "1"; scaffold_3556 StringTie exon 31410 31457 1000 + . gene_id "MSTRG.74211"; transcript_id "MSTRG.74211.1"; exon_number "1"; scaffold_3556 StringTie exon 31643 31813 1000 + . gene_id "MSTRG.74211"; transcript_id "MSTRG.74211.1"; exon_number "2"; scaffold_35562 StringTie exon 1871 2083 1000 . . gene_id "MSTRG.74215"; transcript_id "MSTRG.74215.1"; exon_number "1"; scaffold_3557 StringTie exon 62133 62398 1000 . . gene_id "MSTRG.74224"; transcript_id "MSTRG.74224.1"; exon_number "1"; scaffold_356 StringTie exon 50312 50711 1000 - . gene_id "MSTRG.74250"; transcript_id "MSTRG.74250.1"; exon_number "1"; scaffold_356 StringTie exon 50999 51266 1000 - . gene_id "MSTRG.74250"; transcript_id "MSTRG.74250.1"; exon_number "2"; scaffold_356 StringTie exon 51622 51648 1000 - . gene_id "MSTRG.74250"; transcript_id "MSTRG.74250.1"; exon_number "3"; scaffold_356 StringTie exon 52380 52527 1000 - . gene_id "MSTRG.74250"; transcript_id "MSTRG.74250.1"; exon_number "4"; scaffold_356 StringTie exon 53209 53442 1000 - . gene_id "MSTRG.74250"; transcript_id "MSTRG.74250.1"; exon_number "5"; scaffold_356 StringTie exon 55398 55493 1000 - . gene_id "MSTRG.74250"; transcript_id "MSTRG.74250.1"; exon_number "6"; scaffold_356 StringTie exon 58644 58839 1000 - . gene_id "MSTRG.74250"; transcript_id "MSTRG.74250.1"; exon_number "7"; scaffold_356 StringTie exon 59130 59367 1000 - . gene_id "MSTRG.74250"; transcript_id "MSTRG.74250.1"; exon_number "8"; scaffold_356 StringTie exon 330878 331120 1000 . . gene_id "MSTRG.74273"; transcript_id "MSTRG.74273.1"; exon_number "1"; scaffold_356 StringTie exon 562225 562455 1000 . . gene_id "MSTRG.74300"; transcript_id "MSTRG.74300.1"; exon_number "1"; scaffold_356 StringTie exon 695751 695939 1000 + . gene_id "MSTRG.74317"; transcript_id "MSTRG.74317.1"; exon_number "1"; scaffold_356 StringTie exon 696484 696624 1000 + . gene_id "MSTRG.74317"; transcript_id "MSTRG.74317.1"; exon_number "2"; scaffold_356 StringTie exon 777077 777230 1000 + . gene_id "MSTRG.74327"; transcript_id "MSTRG.74327.1"; exon_number "1"; scaffold_356 StringTie exon 777540 777591 1000 + . gene_id "MSTRG.74327"; transcript_id "MSTRG.74327.1"; exon_number "2"; scaffold_3560 StringTie exon 2287 2715 1000 . . gene_id "MSTRG.74343"; transcript_id "MSTRG.74343.1"; exon_number "1"; scaffold_3561 StringTie exon 18210 18297 1000 - . gene_id "MSTRG.74353"; transcript_id "MSTRG.74353.1"; exon_number "1"; scaffold_3561 StringTie exon 19324 19392 1000 - . gene_id "MSTRG.74353"; transcript_id "MSTRG.74353.1"; exon_number "2"; scaffold_3561 StringTie exon 21491 21606 1000 - . gene_id "MSTRG.74353"; transcript_id "MSTRG.74353.1"; exon_number "3"; scaffold_35627 StringTie exon 3371 3606 1000 . . gene_id "MSTRG.74366"; transcript_id "MSTRG.74366.1"; exon_number "1"; scaffold_35645 StringTie exon 1576 1781 1000 . . gene_id "MSTRG.74379"; transcript_id "MSTRG.74379.1"; exon_number "1"; scaffold_35645 StringTie exon 2928 3203 1000 . . gene_id "MSTRG.74380"; transcript_id "MSTRG.74380.1"; exon_number "1"; scaffold_35649 StringTie exon 3334 3573 1000 . . gene_id "MSTRG.74382"; transcript_id "MSTRG.74382.1"; exon_number "1"; scaffold_3566 StringTie exon 58389 58458 1000 - . gene_id "MSTRG.74395"; transcript_id "MSTRG.74395.1"; exon_number "1"; scaffold_3566 StringTie exon 61237 61705 1000 - . gene_id "MSTRG.74395"; transcript_id "MSTRG.74395.1"; exon_number "2"; scaffold_3567 StringTie exon 43121 43713 1000 . . gene_id "MSTRG.74400"; transcript_id "MSTRG.74400.1"; exon_number "1"; scaffold_3569 StringTie exon 389 498 1000 + . gene_id "MSTRG.74410"; transcript_id "MSTRG.74410.1"; exon_number "1"; scaffold_3569 StringTie exon 4297 4466 1000 + . gene_id "MSTRG.74410"; transcript_id "MSTRG.74410.1"; exon_number "2"; scaffold_357 StringTie exon 368526 368825 1000 . . gene_id "MSTRG.74448"; transcript_id "MSTRG.74448.1"; exon_number "1"; scaffold_357 StringTie exon 380888 381143 1000 . . gene_id "MSTRG.74450"; transcript_id "MSTRG.74450.1"; exon_number "1"; scaffold_3570 StringTie exon 52254 52458 1000 . . gene_id "MSTRG.74489"; transcript_id "MSTRG.74489.1"; exon_number "1"; scaffold_35710 StringTie exon 1019 1286 1000 - . gene_id "MSTRG.74494"; transcript_id "MSTRG.74494.1"; exon_number "1"; scaffold_35710 StringTie exon 1342 1895 1000 - . gene_id "MSTRG.74494"; transcript_id "MSTRG.74494.1"; exon_number "2"; scaffold_3572 StringTie exon 22461 22671 1000 . . gene_id "MSTRG.74502"; transcript_id "MSTRG.74502.1"; exon_number "1"; scaffold_35722 StringTie exon 94 296 1000 . . gene_id "MSTRG.74505"; transcript_id "MSTRG.74505.1"; exon_number "1"; scaffold_35734 StringTie exon 2305 2568 1000 . . gene_id "MSTRG.74515"; transcript_id "MSTRG.74515.1"; exon_number "1"; scaffold_3574 StringTie exon 47130 47277 1000 + . gene_id "MSTRG.74525"; transcript_id "MSTRG.74525.1"; exon_number "1"; scaffold_3574 StringTie exon 48079 48178 1000 + . gene_id "MSTRG.74525"; transcript_id "MSTRG.74525.1"; exon_number "2"; scaffold_3574 StringTie exon 48519 48671 1000 + . gene_id "MSTRG.74525"; transcript_id "MSTRG.74525.1"; exon_number "3"; scaffold_3576 StringTie exon 45820 46078 1000 . . gene_id "MSTRG.74532"; transcript_id "MSTRG.74532.1"; exon_number "1"; scaffold_35775 StringTie exon 2962 3199 1000 . . gene_id "MSTRG.74540"; transcript_id "MSTRG.74540.1"; exon_number "1"; scaffold_358 StringTie exon 173678 173957 1000 . . gene_id "MSTRG.74557"; transcript_id "MSTRG.74557.1"; exon_number "1"; scaffold_358 StringTie exon 919719 920048 1000 . . gene_id "MSTRG.74600"; transcript_id "MSTRG.74600.1"; exon_number "1"; scaffold_3580 StringTie exon 51405 51620 1000 . . gene_id "MSTRG.74605"; transcript_id "MSTRG.74605.1"; exon_number "1"; scaffold_3585 StringTie exon 28455 28539 1000 - . gene_id "MSTRG.74645"; transcript_id "MSTRG.74645.1"; exon_number "1"; scaffold_3585 StringTie exon 29030 29162 1000 - . gene_id "MSTRG.74645"; transcript_id "MSTRG.74645.1"; exon_number "2"; scaffold_3586 StringTie exon 36275 37183 1000 - . gene_id "MSTRG.74655"; transcript_id "MSTRG.74655.1"; exon_number "1"; scaffold_3587 StringTie exon 50300 50552 1000 . . gene_id "MSTRG.74662"; transcript_id "MSTRG.74662.1"; exon_number "1"; scaffold_3588 StringTie exon 11358 11591 1000 - . gene_id "MSTRG.74668"; transcript_id "MSTRG.74668.1"; exon_number "1"; scaffold_3588 StringTie exon 11796 11859 1000 - . gene_id "MSTRG.74668"; transcript_id "MSTRG.74668.1"; exon_number "2"; scaffold_3589 StringTie exon 44426 44687 1000 . . gene_id "MSTRG.74685"; transcript_id "MSTRG.74685.1"; exon_number "1"; scaffold_359 StringTie exon 9303 9544 1000 . . gene_id "MSTRG.74689"; transcript_id "MSTRG.74689.1"; exon_number "1"; scaffold_359 StringTie exon 47558 47961 1000 . . gene_id "MSTRG.74692"; transcript_id "MSTRG.74692.1"; exon_number "1"; scaffold_359 StringTie exon 481724 482067 1000 . . gene_id "MSTRG.74708"; transcript_id "MSTRG.74708.1"; exon_number "1"; scaffold_359 StringTie exon 528536 528761 1000 . . gene_id "MSTRG.74710"; transcript_id "MSTRG.74710.1"; exon_number "1"; scaffold_359 StringTie exon 573298 573762 1000 . . gene_id "MSTRG.74716"; transcript_id "MSTRG.74716.1"; exon_number "1"; scaffold_35903 StringTie exon 2355 2593 1000 . . gene_id "MSTRG.74743"; transcript_id "MSTRG.74743.1"; exon_number "1"; scaffold_35947 StringTie exon 2446 2658 1000 . . gene_id "MSTRG.74776"; transcript_id "MSTRG.74776.1"; exon_number "1"; scaffold_35981 StringTie exon 1997 2238 1000 . . gene_id "MSTRG.74801"; transcript_id "MSTRG.74801.1"; exon_number "1"; scaffold_35993 StringTie exon 1 285 1000 . . gene_id "MSTRG.74809"; transcript_id "MSTRG.74809.1"; exon_number "1"; scaffold_35994 StringTie exon 642 843 1000 . . gene_id "MSTRG.74811"; transcript_id "MSTRG.74811.1"; exon_number "1"; scaffold_36 StringTie exon 118335 118442 1000 - . gene_id "MSTRG.74829"; transcript_id "MSTRG.74829.1"; exon_number "1"; scaffold_36 StringTie exon 119271 119402 1000 - . gene_id "MSTRG.74829"; transcript_id "MSTRG.74829.1"; exon_number "2"; scaffold_36 StringTie exon 119777 119815 1000 - . gene_id "MSTRG.74829"; transcript_id "MSTRG.74829.1"; exon_number "3"; scaffold_36 StringTie exon 295500 295810 1000 . . gene_id "MSTRG.74841"; transcript_id "MSTRG.74841.1"; exon_number "1"; scaffold_36 StringTie exon 344546 344818 1000 . . gene_id "MSTRG.74850"; transcript_id "MSTRG.74850.1"; exon_number "1"; scaffold_36 StringTie exon 423559 423796 1000 . . gene_id "MSTRG.74857"; transcript_id "MSTRG.74857.1"; exon_number "1"; scaffold_36 StringTie exon 474766 474837 1000 + . gene_id "MSTRG.74864"; transcript_id "MSTRG.74864.1"; exon_number "1"; scaffold_36 StringTie exon 474962 475074 1000 + . gene_id "MSTRG.74864"; transcript_id "MSTRG.74864.1"; exon_number "2"; scaffold_36 StringTie exon 475240 475371 1000 + . gene_id "MSTRG.74864"; transcript_id "MSTRG.74864.1"; exon_number "3"; scaffold_36 StringTie exon 475636 475735 1000 + . gene_id "MSTRG.74864"; transcript_id "MSTRG.74864.1"; exon_number "4"; scaffold_36 StringTie exon 475898 475935 1000 + . gene_id "MSTRG.74864"; transcript_id "MSTRG.74864.1"; exon_number "5"; scaffold_36 StringTie exon 502828 502852 1000 + . gene_id "MSTRG.74869"; transcript_id "MSTRG.74869.1"; exon_number "1"; scaffold_36 StringTie exon 503287 503547 1000 + . gene_id "MSTRG.74869"; transcript_id "MSTRG.74869.1"; exon_number "2"; scaffold_36 StringTie exon 503764 503792 1000 + . gene_id "MSTRG.74869"; transcript_id "MSTRG.74869.1"; exon_number "3"; scaffold_36 StringTie exon 544345 544558 1000 . . gene_id "MSTRG.74874"; transcript_id "MSTRG.74874.1"; exon_number "1"; scaffold_36 StringTie exon 559606 561416 1000 - . gene_id "MSTRG.74879"; transcript_id "MSTRG.74879.1"; exon_number "1"; scaffold_36 StringTie exon 562665 563473 1000 - . gene_id "MSTRG.74879"; transcript_id "MSTRG.74879.1"; exon_number "2"; scaffold_36 StringTie exon 1720355 1720627 1000 . . gene_id "MSTRG.74951"; transcript_id "MSTRG.74951.1"; exon_number "1"; scaffold_36 StringTie exon 2015968 2016294 1000 . . gene_id "MSTRG.74972"; transcript_id "MSTRG.74972.1"; exon_number "1"; scaffold_36 StringTie exon 2220633 2220963 1000 . . gene_id "MSTRG.74979"; transcript_id "MSTRG.74979.1"; exon_number "1"; scaffold_360 StringTie exon 194196 194784 1000 - . gene_id "MSTRG.74999"; transcript_id "MSTRG.74999.1"; exon_number "1"; scaffold_360 StringTie exon 266123 266292 1000 + . gene_id "MSTRG.75005"; transcript_id "MSTRG.75005.1"; exon_number "1"; scaffold_360 StringTie exon 266422 266550 1000 + . gene_id "MSTRG.75005"; transcript_id "MSTRG.75005.1"; exon_number "2"; scaffold_360 StringTie exon 267410 267491 1000 + . gene_id "MSTRG.75005"; transcript_id "MSTRG.75005.1"; exon_number "3"; scaffold_360 StringTie exon 267629 267703 1000 + . gene_id "MSTRG.75005"; transcript_id "MSTRG.75005.1"; exon_number "4"; scaffold_360 StringTie exon 267956 268118 1000 + . gene_id "MSTRG.75005"; transcript_id "MSTRG.75005.1"; exon_number "5"; scaffold_360 StringTie exon 268304 268419 1000 + . gene_id "MSTRG.75005"; transcript_id "MSTRG.75005.1"; exon_number "6"; scaffold_360 StringTie exon 268671 268797 1000 + . gene_id "MSTRG.75005"; transcript_id "MSTRG.75005.1"; exon_number "7"; scaffold_360 StringTie exon 301985 302076 1000 + . gene_id "MSTRG.75012"; transcript_id "MSTRG.75012.1"; exon_number "1"; scaffold_360 StringTie exon 302361 302477 1000 + . gene_id "MSTRG.75012"; transcript_id "MSTRG.75012.1"; exon_number "2"; scaffold_360 StringTie exon 302726 302782 1000 + . gene_id "MSTRG.75012"; transcript_id "MSTRG.75012.1"; exon_number "3"; scaffold_360 StringTie exon 329790 329910 1000 + . gene_id "MSTRG.75019"; transcript_id "MSTRG.75019.1"; exon_number "1"; scaffold_360 StringTie exon 330385 330499 1000 + . gene_id "MSTRG.75019"; transcript_id "MSTRG.75019.1"; exon_number "2"; scaffold_360 StringTie exon 584375 584612 1000 . . gene_id "MSTRG.75041"; transcript_id "MSTRG.75041.1"; exon_number "1"; scaffold_360 StringTie exon 834759 834847 1000 - . gene_id "MSTRG.75063"; transcript_id "MSTRG.75063.1"; exon_number "1"; scaffold_360 StringTie exon 838581 838649 1000 - . gene_id "MSTRG.75063"; transcript_id "MSTRG.75063.1"; exon_number "2"; scaffold_360 StringTie exon 840185 840241 1000 - . gene_id "MSTRG.75063"; transcript_id "MSTRG.75063.1"; exon_number "3"; scaffold_360 StringTie exon 840349 840405 1000 - . gene_id "MSTRG.75063"; transcript_id "MSTRG.75063.1"; exon_number "4"; scaffold_360 StringTie exon 854532 854831 1000 - . gene_id "MSTRG.75066"; transcript_id "MSTRG.75066.1"; exon_number "1"; scaffold_360 StringTie exon 856597 856754 1000 - . gene_id "MSTRG.75066"; transcript_id "MSTRG.75066.1"; exon_number "2"; scaffold_360 StringTie exon 857958 858008 1000 - . gene_id "MSTRG.75066"; transcript_id "MSTRG.75066.1"; exon_number "3"; scaffold_360 StringTie exon 858205 858277 1000 - . gene_id "MSTRG.75066"; transcript_id "MSTRG.75066.1"; exon_number "4"; scaffold_360 StringTie exon 858506 858595 1000 - . gene_id "MSTRG.75066"; transcript_id "MSTRG.75066.1"; exon_number "5"; scaffold_360 StringTie exon 867119 867177 1000 - . gene_id "MSTRG.75066"; transcript_id "MSTRG.75066.1"; exon_number "6"; scaffold_360 StringTie exon 867323 867434 1000 - . gene_id "MSTRG.75066"; transcript_id "MSTRG.75066.1"; exon_number "7"; scaffold_360 StringTie exon 867556 867665 1000 - . gene_id "MSTRG.75066"; transcript_id "MSTRG.75066.1"; exon_number "8"; scaffold_360 StringTie exon 868497 868870 1000 . . gene_id "MSTRG.75067"; transcript_id "MSTRG.75067.1"; exon_number "1"; scaffold_3601 StringTie exon 5871 6260 1000 . . gene_id "MSTRG.75078"; transcript_id "MSTRG.75078.1"; exon_number "1"; scaffold_36022 StringTie exon 2587 2812 1000 . . gene_id "MSTRG.75094"; transcript_id "MSTRG.75094.1"; exon_number "1"; scaffold_3603 StringTie exon 60818 61949 1000 . . gene_id "MSTRG.75102"; transcript_id "MSTRG.75102.1"; exon_number "1"; scaffold_3604 StringTie exon 4858 8770 1000 . . gene_id "MSTRG.75107"; transcript_id "MSTRG.75107.1"; exon_number "1"; scaffold_3604 StringTie exon 23545 23778 1000 - . gene_id "MSTRG.75112"; transcript_id "MSTRG.75112.1"; exon_number "1"; scaffold_3604 StringTie exon 24360 24601 1000 - . gene_id "MSTRG.75112"; transcript_id "MSTRG.75112.1"; exon_number "2"; scaffold_3604 StringTie exon 48447 48499 1000 - . gene_id "MSTRG.75112"; transcript_id "MSTRG.75112.1"; exon_number "3"; scaffold_3605 StringTie exon 32573 32791 1000 . . gene_id "MSTRG.75121"; transcript_id "MSTRG.75121.1"; exon_number "1"; scaffold_36066 StringTie exon 359 626 1000 . . gene_id "MSTRG.75129"; transcript_id "MSTRG.75129.1"; exon_number "1"; scaffold_36088 StringTie exon 3190 3520 1000 . . gene_id "MSTRG.75151"; transcript_id "MSTRG.75151.1"; exon_number "1"; scaffold_36091 StringTie exon 1752 2450 1000 . . gene_id "MSTRG.75160"; transcript_id "MSTRG.75160.1"; exon_number "1"; scaffold_361 StringTie exon 561645 562234 1000 + . gene_id "MSTRG.75221"; transcript_id "MSTRG.75221.1"; exon_number "1"; scaffold_361 StringTie exon 570075 570127 1000 + . gene_id "MSTRG.75221"; transcript_id "MSTRG.75221.1"; exon_number "2"; scaffold_361 StringTie exon 576169 576543 1000 . . gene_id "MSTRG.75223"; transcript_id "MSTRG.75223.1"; exon_number "1"; scaffold_361 StringTie exon 589016 590019 1000 . . gene_id "MSTRG.75225"; transcript_id "MSTRG.75225.1"; exon_number "1"; scaffold_361 StringTie exon 622427 622902 1000 - . gene_id "MSTRG.75232"; transcript_id "MSTRG.75232.1"; exon_number "1"; scaffold_3611 StringTie exon 25719 26534 1000 - . gene_id "MSTRG.75257"; transcript_id "MSTRG.75257.1"; exon_number "1"; scaffold_3611 StringTie exon 30692 30811 1000 - . gene_id "MSTRG.75257"; transcript_id "MSTRG.75257.1"; exon_number "2"; scaffold_3611 StringTie exon 37273 37412 1000 - . gene_id "MSTRG.75257"; transcript_id "MSTRG.75257.1"; exon_number "3"; scaffold_3611 StringTie exon 37646 37831 1000 - . gene_id "MSTRG.75257"; transcript_id "MSTRG.75257.1"; exon_number "4"; scaffold_3611 StringTie exon 38741 38880 1000 - . gene_id "MSTRG.75257"; transcript_id "MSTRG.75257.1"; exon_number "5"; scaffold_3617 StringTie exon 51966 52250 1000 . . gene_id "MSTRG.75300"; transcript_id "MSTRG.75300.1"; exon_number "1"; scaffold_3619 StringTie exon 34668 35003 1000 . . gene_id "MSTRG.75318"; transcript_id "MSTRG.75318.1"; exon_number "1"; scaffold_36190 StringTie exon 1650 1930 1000 . . gene_id "MSTRG.75320"; transcript_id "MSTRG.75320.1"; exon_number "1"; scaffold_36199 StringTie exon 2587 2786 1000 . . gene_id "MSTRG.75325"; transcript_id "MSTRG.75325.1"; exon_number "1"; scaffold_362 StringTie exon 135315 135544 1000 . . gene_id "MSTRG.75334"; transcript_id "MSTRG.75334.1"; exon_number "1"; scaffold_362 StringTie exon 171248 171636 1000 . . gene_id "MSTRG.75338"; transcript_id "MSTRG.75338.1"; exon_number "1"; scaffold_362 StringTie exon 422704 422954 1000 - . gene_id "MSTRG.75352"; transcript_id "MSTRG.75352.1"; exon_number "1"; scaffold_362 StringTie exon 423148 423334 1000 - . gene_id "MSTRG.75352"; transcript_id "MSTRG.75352.1"; exon_number "2"; scaffold_362 StringTie exon 633054 633513 1000 . . gene_id "MSTRG.75370"; transcript_id "MSTRG.75370.1"; exon_number "1"; scaffold_362 StringTie exon 808578 809178 1000 . . gene_id "MSTRG.75384"; transcript_id "MSTRG.75384.1"; exon_number "1"; scaffold_362 StringTie exon 841864 842079 1000 . . gene_id "MSTRG.75386"; transcript_id "MSTRG.75386.1"; exon_number "1"; scaffold_36207 StringTie exon 1186 1613 1000 . . gene_id "MSTRG.75393"; transcript_id "MSTRG.75393.1"; exon_number "1"; scaffold_3621 StringTie exon 28215 28317 1000 - . gene_id "MSTRG.75398"; transcript_id "MSTRG.75398.1"; exon_number "1"; scaffold_3621 StringTie exon 28950 29029 1000 - . gene_id "MSTRG.75398"; transcript_id "MSTRG.75398.1"; exon_number "2"; scaffold_3621 StringTie exon 30309 30333 1000 - . gene_id "MSTRG.75398"; transcript_id "MSTRG.75398.1"; exon_number "3"; scaffold_3621 StringTie exon 30555 30901 1000 - . gene_id "MSTRG.75398"; transcript_id "MSTRG.75398.1"; exon_number "4"; scaffold_36283 StringTie exon 2674 2889 1000 . . gene_id "MSTRG.75451"; transcript_id "MSTRG.75451.1"; exon_number "1"; scaffold_363 StringTie exon 12440 12645 1000 . . gene_id "MSTRG.75461"; transcript_id "MSTRG.75461.1"; exon_number "1"; scaffold_363 StringTie exon 314264 314388 1000 + . gene_id "MSTRG.75483"; transcript_id "MSTRG.75483.1"; exon_number "1"; scaffold_363 StringTie exon 314807 314884 1000 + . gene_id "MSTRG.75483"; transcript_id "MSTRG.75483.1"; exon_number "2"; scaffold_363 StringTie exon 397250 397649 1000 . . gene_id "MSTRG.75490"; transcript_id "MSTRG.75490.1"; exon_number "1"; scaffold_363 StringTie exon 421843 421861 1000 + . gene_id "MSTRG.75493"; transcript_id "MSTRG.75493.1"; exon_number "1"; scaffold_363 StringTie exon 421961 422111 1000 + . gene_id "MSTRG.75493"; transcript_id "MSTRG.75493.1"; exon_number "2"; scaffold_363 StringTie exon 429506 429619 1000 + . gene_id "MSTRG.75493"; transcript_id "MSTRG.75493.1"; exon_number "3"; scaffold_363 StringTie exon 430407 430649 1000 + . gene_id "MSTRG.75493"; transcript_id "MSTRG.75493.1"; exon_number "4"; scaffold_363 StringTie exon 436561 436910 1000 . . gene_id "MSTRG.75494"; transcript_id "MSTRG.75494.1"; exon_number "1"; scaffold_363 StringTie exon 469563 470104 1000 - . gene_id "MSTRG.75500"; transcript_id "MSTRG.75500.1"; exon_number "1"; scaffold_363 StringTie exon 470233 470361 1000 - . gene_id "MSTRG.75500"; transcript_id "MSTRG.75500.1"; exon_number "2"; scaffold_3630 StringTie exon 32842 33051 1000 . . gene_id "MSTRG.75546"; transcript_id "MSTRG.75546.1"; exon_number "1"; scaffold_3633 StringTie exon 17510 17734 1000 . . gene_id "MSTRG.75566"; transcript_id "MSTRG.75566.1"; exon_number "1"; scaffold_3634 StringTie exon 60812 61049 1000 . . gene_id "MSTRG.75576"; transcript_id "MSTRG.75576.1"; exon_number "1"; scaffold_36366 StringTie exon 3111 3440 1000 . . gene_id "MSTRG.75600"; transcript_id "MSTRG.75600.1"; exon_number "1"; scaffold_36369 StringTie exon 2434 2653 1000 . . gene_id "MSTRG.75603"; transcript_id "MSTRG.75603.1"; exon_number "1"; scaffold_36383 StringTie exon 930 1144 1000 . . gene_id "MSTRG.75613"; transcript_id "MSTRG.75613.1"; exon_number "1"; scaffold_36394 StringTie exon 1207 1409 1000 . . gene_id "MSTRG.75618"; transcript_id "MSTRG.75618.1"; exon_number "1"; scaffold_364 StringTie exon 478837 478884 1000 - . gene_id "MSTRG.75654"; transcript_id "MSTRG.75654.1"; exon_number "1"; scaffold_364 StringTie exon 479069 479551 1000 - . gene_id "MSTRG.75654"; transcript_id "MSTRG.75654.1"; exon_number "2"; scaffold_364 StringTie exon 616893 617107 1000 . . gene_id "MSTRG.75666"; transcript_id "MSTRG.75666.1"; exon_number "1"; scaffold_3640 StringTie exon 8633 9157 1000 . . gene_id "MSTRG.75683"; transcript_id "MSTRG.75683.1"; exon_number "1"; scaffold_3640 StringTie exon 28423 28805 1000 . . gene_id "MSTRG.75685"; transcript_id "MSTRG.75685.1"; exon_number "1"; scaffold_36441 StringTie exon 1137 1478 1000 . . gene_id "MSTRG.75733"; transcript_id "MSTRG.75733.1"; exon_number "1"; scaffold_3645 StringTie exon 47276 47475 1000 . . gene_id "MSTRG.75738"; transcript_id "MSTRG.75738.1"; exon_number "1"; scaffold_36453 StringTie exon 2818 3410 1000 . . gene_id "MSTRG.75739"; transcript_id "MSTRG.75739.1"; exon_number "1"; scaffold_36458 StringTie exon 1229 1592 1000 . . gene_id "MSTRG.75740"; transcript_id "MSTRG.75740.1"; exon_number "1"; scaffold_36475 StringTie exon 1900 2190 1000 . . gene_id "MSTRG.75753"; transcript_id "MSTRG.75753.1"; exon_number "1"; scaffold_365 StringTie exon 9274 9473 1000 . . gene_id "MSTRG.75780"; transcript_id "MSTRG.75780.1"; exon_number "1"; scaffold_365 StringTie exon 209847 210170 1000 . . gene_id "MSTRG.75794"; transcript_id "MSTRG.75794.1"; exon_number "1"; scaffold_365 StringTie exon 364493 364585 1000 + . gene_id "MSTRG.75809"; transcript_id "MSTRG.75809.1"; exon_number "1"; scaffold_365 StringTie exon 364882 365115 1000 + . gene_id "MSTRG.75809"; transcript_id "MSTRG.75809.1"; exon_number "2"; scaffold_365 StringTie exon 365367 365467 1000 + . gene_id "MSTRG.75809"; transcript_id "MSTRG.75809.1"; exon_number "3"; scaffold_365 StringTie exon 365571 365654 1000 + . gene_id "MSTRG.75809"; transcript_id "MSTRG.75809.1"; exon_number "4"; scaffold_365 StringTie exon 365745 365874 1000 + . gene_id "MSTRG.75809"; transcript_id "MSTRG.75809.1"; exon_number "5"; scaffold_365 StringTie exon 729958 730039 1000 + . gene_id "MSTRG.75846"; transcript_id "MSTRG.75846.1"; exon_number "1"; scaffold_365 StringTie exon 764031 764156 1000 + . gene_id "MSTRG.75846"; transcript_id "MSTRG.75846.1"; exon_number "2"; scaffold_365 StringTie exon 740422 740783 1000 . . gene_id "MSTRG.75848"; transcript_id "MSTRG.75848.1"; exon_number "1"; scaffold_365 StringTie exon 857855 858097 1000 . . gene_id "MSTRG.75856"; transcript_id "MSTRG.75856.1"; exon_number "1"; scaffold_3650 StringTie exon 21367 22037 1000 . . gene_id "MSTRG.75865"; transcript_id "MSTRG.75865.1"; exon_number "1"; scaffold_3653 StringTie exon 12841 13104 1000 . . gene_id "MSTRG.75886"; transcript_id "MSTRG.75886.1"; exon_number "1"; scaffold_36551 StringTie exon 2094 2363 1000 . . gene_id "MSTRG.75908"; transcript_id "MSTRG.75908.1"; exon_number "1"; scaffold_366 StringTie exon 157342 157431 1000 + . gene_id "MSTRG.75945"; transcript_id "MSTRG.75945.1"; exon_number "1"; scaffold_366 StringTie exon 157885 158041 1000 + . gene_id "MSTRG.75945"; transcript_id "MSTRG.75945.1"; exon_number "2"; scaffold_366 StringTie exon 158730 158838 1000 + . gene_id "MSTRG.75945"; transcript_id "MSTRG.75945.1"; exon_number "3"; scaffold_366 StringTie exon 159274 159431 1000 + . gene_id "MSTRG.75945"; transcript_id "MSTRG.75945.1"; exon_number "4"; scaffold_366 StringTie exon 160478 160491 1000 + . gene_id "MSTRG.75945"; transcript_id "MSTRG.75945.1"; exon_number "5"; scaffold_366 StringTie exon 161269 161486 1000 + . gene_id "MSTRG.75946"; transcript_id "MSTRG.75946.1"; exon_number "1"; scaffold_366 StringTie exon 161732 162155 1000 + . gene_id "MSTRG.75947"; transcript_id "MSTRG.75947.1"; exon_number "1"; scaffold_366 StringTie exon 162260 162331 1000 + . gene_id "MSTRG.75947"; transcript_id "MSTRG.75947.1"; exon_number "2"; scaffold_366 StringTie exon 586266 586606 1000 . . gene_id "MSTRG.75990"; transcript_id "MSTRG.75990.1"; exon_number "1"; scaffold_366 StringTie exon 620897 621113 1000 . . gene_id "MSTRG.75992"; transcript_id "MSTRG.75992.1"; exon_number "1"; scaffold_366 StringTie exon 748889 749104 1000 . . gene_id "MSTRG.75996"; transcript_id "MSTRG.75996.1"; exon_number "1"; scaffold_366 StringTie exon 772670 773350 1000 . . gene_id "MSTRG.75999"; transcript_id "MSTRG.75999.1"; exon_number "1"; scaffold_3661 StringTie exon 27491 27729 1000 + . gene_id "MSTRG.76034"; transcript_id "MSTRG.76034.1"; exon_number "1"; scaffold_36647 StringTie exon 1111 1317 1000 . . gene_id "MSTRG.76056"; transcript_id "MSTRG.76056.1"; exon_number "1"; scaffold_3665 StringTie exon 24362 24862 1000 . . gene_id "MSTRG.76057"; transcript_id "MSTRG.76057.1"; exon_number "1"; scaffold_3666 StringTie exon 34264 34796 1000 . . gene_id "MSTRG.76072"; transcript_id "MSTRG.76072.1"; exon_number "1"; scaffold_3667 StringTie exon 18073 18358 1000 . . gene_id "MSTRG.76079"; transcript_id "MSTRG.76079.1"; exon_number "1"; scaffold_36687 StringTie exon 1521 1644 1000 + . gene_id "MSTRG.76086"; transcript_id "MSTRG.76086.1"; exon_number "1"; scaffold_36687 StringTie exon 1808 1885 1000 + . gene_id "MSTRG.76086"; transcript_id "MSTRG.76086.1"; exon_number "2"; scaffold_36687 StringTie exon 1940 2033 1000 + . gene_id "MSTRG.76086"; transcript_id "MSTRG.76086.1"; exon_number "3"; scaffold_367 StringTie exon 79926 80184 1000 . . gene_id "MSTRG.76098"; transcript_id "MSTRG.76098.1"; exon_number "1"; scaffold_367 StringTie exon 107036 107237 1000 . . gene_id "MSTRG.76101"; transcript_id "MSTRG.76101.1"; exon_number "1"; scaffold_367 StringTie exon 381179 382932 1000 + . gene_id "MSTRG.76122"; transcript_id "MSTRG.76122.1"; exon_number "1"; scaffold_367 StringTie exon 480171 480377 1000 . . gene_id "MSTRG.76135"; transcript_id "MSTRG.76135.1"; exon_number "1"; scaffold_367 StringTie exon 600039 600326 1000 . . gene_id "MSTRG.76144"; transcript_id "MSTRG.76144.1"; exon_number "1"; scaffold_36728 StringTie exon 1522 1751 1000 . . gene_id "MSTRG.76181"; transcript_id "MSTRG.76181.1"; exon_number "1"; scaffold_3673 StringTie exon 15768 16125 1000 . . gene_id "MSTRG.76184"; transcript_id "MSTRG.76184.1"; exon_number "1"; scaffold_3674 StringTie exon 32907 33108 1000 . . gene_id "MSTRG.76201"; transcript_id "MSTRG.76201.1"; exon_number "1"; scaffold_36740 StringTie exon 1002 1311 1000 . . gene_id "MSTRG.76205"; transcript_id "MSTRG.76205.1"; exon_number "1"; scaffold_36740 StringTie exon 2431 2714 1000 . . gene_id "MSTRG.76207"; transcript_id "MSTRG.76207.1"; exon_number "1"; scaffold_36785 StringTie exon 1991 2349 1000 . . gene_id "MSTRG.76229"; transcript_id "MSTRG.76229.1"; exon_number "1"; scaffold_36796 StringTie exon 2755 3354 1000 . . gene_id "MSTRG.76243"; transcript_id "MSTRG.76243.1"; exon_number "1"; scaffold_368 StringTie exon 92942 93211 1000 . . gene_id "MSTRG.76252"; transcript_id "MSTRG.76252.1"; exon_number "1"; scaffold_368 StringTie exon 500757 501766 1000 . . gene_id "MSTRG.76280"; transcript_id "MSTRG.76280.1"; exon_number "1"; scaffold_368 StringTie exon 564156 564308 1000 + . gene_id "MSTRG.76282"; transcript_id "MSTRG.76282.2"; exon_number "1"; scaffold_368 StringTie exon 564535 564628 1000 + . gene_id "MSTRG.76282"; transcript_id "MSTRG.76282.2"; exon_number "2"; scaffold_368 StringTie exon 565035 565194 1000 + . gene_id "MSTRG.76282"; transcript_id "MSTRG.76282.2"; exon_number "3"; scaffold_368 StringTie exon 583230 583259 1000 - . gene_id "MSTRG.76285"; transcript_id "MSTRG.76285.1"; exon_number "1"; scaffold_368 StringTie exon 583530 583587 1000 - . gene_id "MSTRG.76285"; transcript_id "MSTRG.76285.1"; exon_number "2"; scaffold_368 StringTie exon 585697 585820 1000 - . gene_id "MSTRG.76285"; transcript_id "MSTRG.76285.1"; exon_number "3"; scaffold_368 StringTie exon 587760 587836 1000 - . gene_id "MSTRG.76285"; transcript_id "MSTRG.76285.1"; exon_number "4"; scaffold_368 StringTie exon 634665 634878 1000 . . gene_id "MSTRG.76287"; transcript_id "MSTRG.76287.1"; exon_number "1"; scaffold_368 StringTie exon 654762 654810 1000 + . gene_id "MSTRG.76289"; transcript_id "MSTRG.76289.1"; exon_number "1"; scaffold_368 StringTie exon 655006 655106 1000 + . gene_id "MSTRG.76289"; transcript_id "MSTRG.76289.1"; exon_number "2"; scaffold_368 StringTie exon 655228 655313 1000 + . gene_id "MSTRG.76289"; transcript_id "MSTRG.76289.1"; exon_number "3"; scaffold_368 StringTie exon 655449 655513 1000 + . gene_id "MSTRG.76289"; transcript_id "MSTRG.76289.1"; exon_number "4"; scaffold_368 StringTie exon 663105 663177 1000 + . gene_id "MSTRG.76289"; transcript_id "MSTRG.76289.1"; exon_number "5"; scaffold_368 StringTie exon 690126 690278 1000 + . gene_id "MSTRG.76293"; transcript_id "MSTRG.76293.1"; exon_number "1"; scaffold_368 StringTie exon 690553 690629 1000 + . gene_id "MSTRG.76293"; transcript_id "MSTRG.76293.1"; exon_number "2"; scaffold_3680 StringTie exon 58538 58743 1000 . . gene_id "MSTRG.76306"; transcript_id "MSTRG.76306.1"; exon_number "1"; scaffold_3681 StringTie exon 40464 40753 1000 . . gene_id "MSTRG.76312"; transcript_id "MSTRG.76312.1"; exon_number "1"; scaffold_36811 StringTie exon 2768 3434 1000 . . gene_id "MSTRG.76314"; transcript_id "MSTRG.76314.1"; exon_number "1"; scaffold_3684 StringTie exon 43966 44172 1000 . . gene_id "MSTRG.76339"; transcript_id "MSTRG.76339.1"; exon_number "1"; scaffold_369 StringTie exon 199809 200628 1000 . . gene_id "MSTRG.76405"; transcript_id "MSTRG.76405.1"; exon_number "1"; scaffold_369 StringTie exon 352274 352293 1000 - . gene_id "MSTRG.76419"; transcript_id "MSTRG.76419.1"; exon_number "1"; scaffold_369 StringTie exon 353253 353320 1000 - . gene_id "MSTRG.76419"; transcript_id "MSTRG.76419.1"; exon_number "2"; scaffold_369 StringTie exon 353790 353951 1000 - . gene_id "MSTRG.76419"; transcript_id "MSTRG.76419.1"; exon_number "3"; scaffold_369 StringTie exon 357024 357158 1000 - . gene_id "MSTRG.76419"; transcript_id "MSTRG.76419.1"; exon_number "4"; scaffold_369 StringTie exon 358613 358729 1000 - . gene_id "MSTRG.76419"; transcript_id "MSTRG.76419.1"; exon_number "5"; scaffold_369 StringTie exon 370069 370443 1000 - . gene_id "MSTRG.76419"; transcript_id "MSTRG.76419.1"; exon_number "6"; scaffold_369 StringTie exon 515302 515519 1000 . . gene_id "MSTRG.76428"; transcript_id "MSTRG.76428.1"; exon_number "1"; scaffold_3693 StringTie exon 21148 21412 1000 . . gene_id "MSTRG.76485"; transcript_id "MSTRG.76485.1"; exon_number "1"; scaffold_36937 StringTie exon 2478 2726 1000 . . gene_id "MSTRG.76490"; transcript_id "MSTRG.76490.1"; exon_number "1"; scaffold_3695 StringTie exon 2833 3072 1000 . . gene_id "MSTRG.76509"; transcript_id "MSTRG.76509.1"; exon_number "1"; scaffold_37 StringTie exon 52491 52781 1000 . . gene_id "MSTRG.76534"; transcript_id "MSTRG.76534.1"; exon_number "1"; scaffold_37 StringTie exon 993194 993401 1000 . . gene_id "MSTRG.76574"; transcript_id "MSTRG.76574.1"; exon_number "1"; scaffold_37 StringTie exon 1049183 1049477 1000 . . gene_id "MSTRG.76578"; transcript_id "MSTRG.76578.1"; exon_number "1"; scaffold_37 StringTie exon 1388073 1388618 1000 . . gene_id "MSTRG.76603"; transcript_id "MSTRG.76603.1"; exon_number "1"; scaffold_37 StringTie exon 1401701 1401929 1000 . . gene_id "MSTRG.76605"; transcript_id "MSTRG.76605.1"; exon_number "1"; scaffold_37 StringTie exon 1430166 1430389 1000 . . gene_id "MSTRG.76611"; transcript_id "MSTRG.76611.1"; exon_number "1"; scaffold_37 StringTie exon 1769402 1769568 1000 - . gene_id "MSTRG.76639"; transcript_id "MSTRG.76639.1"; exon_number "1"; scaffold_37 StringTie exon 1769744 1769921 1000 - . gene_id "MSTRG.76639"; transcript_id "MSTRG.76639.1"; exon_number "2"; scaffold_37 StringTie exon 1871704 1871782 1000 + . gene_id "MSTRG.76648"; transcript_id "MSTRG.76648.2"; exon_number "1"; scaffold_37 StringTie exon 1873265 1873473 1000 + . gene_id "MSTRG.76648"; transcript_id "MSTRG.76648.2"; exon_number "2"; scaffold_37 StringTie exon 1876527 1876681 1000 + . gene_id "MSTRG.76648"; transcript_id "MSTRG.76648.2"; exon_number "3"; scaffold_37 StringTie exon 1876873 1877005 1000 + . gene_id "MSTRG.76648"; transcript_id "MSTRG.76648.2"; exon_number "4"; scaffold_37 StringTie exon 1877696 1877867 1000 + . gene_id "MSTRG.76648"; transcript_id "MSTRG.76648.2"; exon_number "5"; scaffold_37 StringTie exon 1877994 1878117 1000 + . gene_id "MSTRG.76648"; transcript_id "MSTRG.76648.2"; exon_number "6"; scaffold_37 StringTie exon 1878658 1878847 1000 + . gene_id "MSTRG.76648"; transcript_id "MSTRG.76648.2"; exon_number "7"; scaffold_37 StringTie exon 1888581 1888627 1000 + . gene_id "MSTRG.76648"; transcript_id "MSTRG.76648.2"; exon_number "8"; scaffold_37 StringTie exon 2177097 2177876 1000 . . gene_id "MSTRG.76664"; transcript_id "MSTRG.76664.1"; exon_number "1"; scaffold_370 StringTie exon 570607 570874 1000 . . gene_id "MSTRG.76703"; transcript_id "MSTRG.76703.1"; exon_number "1"; scaffold_370 StringTie exon 718012 718064 1000 - . gene_id "MSTRG.76711"; transcript_id "MSTRG.76711.1"; exon_number "1"; scaffold_370 StringTie exon 719012 719097 1000 - . gene_id "MSTRG.76711"; transcript_id "MSTRG.76711.1"; exon_number "2"; scaffold_370 StringTie exon 720488 720529 1000 - . gene_id "MSTRG.76711"; transcript_id "MSTRG.76711.1"; exon_number "3"; scaffold_370 StringTie exon 720718 720825 1000 - . gene_id "MSTRG.76711"; transcript_id "MSTRG.76711.1"; exon_number "4"; scaffold_370 StringTie exon 838143 838330 1000 + . gene_id "MSTRG.76721"; transcript_id "MSTRG.76721.1"; exon_number "1"; scaffold_370 StringTie exon 838515 838607 1000 + . gene_id "MSTRG.76721"; transcript_id "MSTRG.76721.1"; exon_number "2"; scaffold_370 StringTie exon 838784 838972 1000 + . gene_id "MSTRG.76721"; transcript_id "MSTRG.76721.1"; exon_number "3"; scaffold_370 StringTie exon 839116 839263 1000 + . gene_id "MSTRG.76721"; transcript_id "MSTRG.76721.1"; exon_number "4"; scaffold_370 StringTie exon 839386 839565 1000 + . gene_id "MSTRG.76721"; transcript_id "MSTRG.76721.1"; exon_number "5"; scaffold_37049 StringTie exon 1288 1367 1000 + . gene_id "MSTRG.76763"; transcript_id "MSTRG.76763.1"; exon_number "1"; scaffold_37049 StringTie exon 3073 3181 1000 + . gene_id "MSTRG.76763"; transcript_id "MSTRG.76763.1"; exon_number "2"; scaffold_37049 StringTie exon 3370 3414 1000 + . gene_id "MSTRG.76763"; transcript_id "MSTRG.76763.1"; exon_number "3"; scaffold_3707 StringTie exon 45206 46108 1000 - . gene_id "MSTRG.76785"; transcript_id "MSTRG.76785.1"; exon_number "1"; scaffold_3707 StringTie exon 46261 46354 1000 - . gene_id "MSTRG.76785"; transcript_id "MSTRG.76785.1"; exon_number "2"; scaffold_3707 StringTie exon 47048 47208 1000 - . gene_id "MSTRG.76785"; transcript_id "MSTRG.76785.1"; exon_number "3"; scaffold_3707 StringTie exon 47350 47401 1000 - . gene_id "MSTRG.76785"; transcript_id "MSTRG.76785.1"; exon_number "4"; scaffold_3707 StringTie exon 58747 58985 1000 - . gene_id "MSTRG.76785"; transcript_id "MSTRG.76785.1"; exon_number "5"; scaffold_371 StringTie exon 634002 634202 1000 . . gene_id "MSTRG.76835"; transcript_id "MSTRG.76835.1"; exon_number "1"; scaffold_371 StringTie exon 673721 673807 1000 - . gene_id "MSTRG.76837"; transcript_id "MSTRG.76837.1"; exon_number "1"; scaffold_371 StringTie exon 683423 683648 1000 - . gene_id "MSTRG.76837"; transcript_id "MSTRG.76837.1"; exon_number "2"; scaffold_371 StringTie exon 683845 683937 1000 - . gene_id "MSTRG.76837"; transcript_id "MSTRG.76837.1"; exon_number "3"; scaffold_371 StringTie exon 684448 684548 1000 - . gene_id "MSTRG.76837"; transcript_id "MSTRG.76837.1"; exon_number "4"; scaffold_371 StringTie exon 793762 793928 1000 - . gene_id "MSTRG.76845"; transcript_id "MSTRG.76845.1"; exon_number "1"; scaffold_371 StringTie exon 795846 795936 1000 - . gene_id "MSTRG.76845"; transcript_id "MSTRG.76845.1"; exon_number "2"; scaffold_37126 StringTie exon 1313 1741 1000 . . gene_id "MSTRG.76871"; transcript_id "MSTRG.76871.1"; exon_number "1"; scaffold_3713 StringTie exon 9847 10165 1000 . . gene_id "MSTRG.76873"; transcript_id "MSTRG.76873.1"; exon_number "1"; scaffold_37141 StringTie exon 2039 2288 1000 . . gene_id "MSTRG.76876"; transcript_id "MSTRG.76876.1"; exon_number "1"; scaffold_37150 StringTie exon 2113 2988 1000 . . gene_id "MSTRG.76881"; transcript_id "MSTRG.76881.1"; exon_number "1"; scaffold_37154 StringTie exon 35 428 1000 . . gene_id "MSTRG.76883"; transcript_id "MSTRG.76883.1"; exon_number "1"; scaffold_3716 StringTie exon 47204 47480 1000 . . gene_id "MSTRG.76887"; transcript_id "MSTRG.76887.1"; exon_number "1"; scaffold_3717 StringTie exon 3036 3246 1000 . . gene_id "MSTRG.76891"; transcript_id "MSTRG.76891.1"; exon_number "1"; scaffold_3718 StringTie exon 28695 28958 1000 . . gene_id "MSTRG.76898"; transcript_id "MSTRG.76898.1"; exon_number "1"; scaffold_3718 StringTie exon 37614 37878 1000 . . gene_id "MSTRG.76899"; transcript_id "MSTRG.76899.1"; exon_number "1"; scaffold_372 StringTie exon 49720 49919 1000 . . gene_id "MSTRG.76919"; transcript_id "MSTRG.76919.1"; exon_number "1"; scaffold_372 StringTie exon 211067 212473 1000 - . gene_id "MSTRG.76936"; transcript_id "MSTRG.76936.1"; exon_number "1"; scaffold_372 StringTie exon 397172 397470 1000 . . gene_id "MSTRG.76952"; transcript_id "MSTRG.76952.1"; exon_number "1"; scaffold_372 StringTie exon 428409 428418 1000 - . gene_id "MSTRG.76954"; transcript_id "MSTRG.76954.1"; exon_number "1"; scaffold_372 StringTie exon 478097 479001 1000 - . gene_id "MSTRG.76954"; transcript_id "MSTRG.76954.1"; exon_number "2"; scaffold_372 StringTie exon 516203 516622 1000 . . gene_id "MSTRG.76959"; transcript_id "MSTRG.76959.1"; exon_number "1"; scaffold_372 StringTie exon 647349 647578 1000 . . gene_id "MSTRG.76977"; transcript_id "MSTRG.76977.1"; exon_number "1"; scaffold_372 StringTie exon 863214 863435 1000 . . gene_id "MSTRG.76988"; transcript_id "MSTRG.76988.1"; exon_number "1"; scaffold_37268 StringTie exon 2482 2700 1000 . . gene_id "MSTRG.77034"; transcript_id "MSTRG.77034.1"; exon_number "1"; scaffold_3727 StringTie exon 23947 24341 1000 . . gene_id "MSTRG.77036"; transcript_id "MSTRG.77036.1"; exon_number "1"; scaffold_3728 StringTie exon 14247 14610 1000 . . gene_id "MSTRG.77044"; transcript_id "MSTRG.77044.1"; exon_number "1"; scaffold_3728 StringTie exon 35123 35258 1000 - . gene_id "MSTRG.77046"; transcript_id "MSTRG.77046.1"; exon_number "1"; scaffold_3728 StringTie exon 38739 38901 1000 - . gene_id "MSTRG.77046"; transcript_id "MSTRG.77046.1"; exon_number "2"; scaffold_3728 StringTie exon 44557 44907 1000 - . gene_id "MSTRG.77046"; transcript_id "MSTRG.77046.1"; exon_number "3"; scaffold_3729 StringTie exon 24784 25108 1000 . . gene_id "MSTRG.77052"; transcript_id "MSTRG.77052.1"; exon_number "1"; scaffold_373 StringTie exon 64066 64109 1000 + . gene_id "MSTRG.77065"; transcript_id "MSTRG.77065.1"; exon_number "1"; scaffold_373 StringTie exon 65257 65330 1000 + . gene_id "MSTRG.77065"; transcript_id "MSTRG.77065.1"; exon_number "2"; scaffold_373 StringTie exon 65431 65515 1000 + . gene_id "MSTRG.77065"; transcript_id "MSTRG.77065.1"; exon_number "3"; scaffold_373 StringTie exon 65670 65779 1000 + . gene_id "MSTRG.77065"; transcript_id "MSTRG.77065.1"; exon_number "4"; scaffold_373 StringTie exon 65942 66005 1000 + . gene_id "MSTRG.77065"; transcript_id "MSTRG.77065.1"; exon_number "5"; scaffold_373 StringTie exon 66177 66315 1000 + . gene_id "MSTRG.77065"; transcript_id "MSTRG.77065.1"; exon_number "6"; scaffold_373 StringTie exon 67913 67995 1000 + . gene_id "MSTRG.77065"; transcript_id "MSTRG.77065.1"; exon_number "7"; scaffold_373 StringTie exon 68128 68501 1000 + . gene_id "MSTRG.77065"; transcript_id "MSTRG.77065.1"; exon_number "8"; scaffold_373 StringTie exon 230317 230574 1000 . . gene_id "MSTRG.77083"; transcript_id "MSTRG.77083.1"; exon_number "1"; scaffold_373 StringTie exon 233402 233476 1000 + . gene_id "MSTRG.77084"; transcript_id "MSTRG.77084.1"; exon_number "1"; scaffold_373 StringTie exon 234019 234081 1000 + . gene_id "MSTRG.77084"; transcript_id "MSTRG.77084.1"; exon_number "2"; scaffold_373 StringTie exon 236297 236339 1000 + . gene_id "MSTRG.77084"; transcript_id "MSTRG.77084.1"; exon_number "3"; scaffold_373 StringTie exon 238944 239058 1000 + . gene_id "MSTRG.77084"; transcript_id "MSTRG.77084.1"; exon_number "4"; scaffold_373 StringTie exon 240378 240464 1000 + . gene_id "MSTRG.77084"; transcript_id "MSTRG.77084.1"; exon_number "5"; scaffold_373 StringTie exon 240654 240777 1000 + . gene_id "MSTRG.77084"; transcript_id "MSTRG.77084.1"; exon_number "6"; scaffold_373 StringTie exon 241174 241298 1000 + . gene_id "MSTRG.77084"; transcript_id "MSTRG.77084.1"; exon_number "7"; scaffold_373 StringTie exon 702307 702362 1000 + . gene_id "MSTRG.77129"; transcript_id "MSTRG.77129.1"; exon_number "1"; scaffold_373 StringTie exon 702444 702581 1000 + . gene_id "MSTRG.77129"; transcript_id "MSTRG.77129.1"; exon_number "2"; scaffold_373 StringTie exon 702838 702979 1000 + . gene_id "MSTRG.77129"; transcript_id "MSTRG.77129.1"; exon_number "3"; scaffold_373 StringTie exon 754478 754746 1000 . . gene_id "MSTRG.77134"; transcript_id "MSTRG.77134.1"; exon_number "1"; scaffold_373 StringTie exon 869240 869350 1000 - . gene_id "MSTRG.77144"; transcript_id "MSTRG.77144.1"; exon_number "1"; scaffold_373 StringTie exon 869585 869721 1000 - . gene_id "MSTRG.77144"; transcript_id "MSTRG.77144.1"; exon_number "2"; scaffold_373 StringTie exon 870116 870180 1000 - . gene_id "MSTRG.77144"; transcript_id "MSTRG.77144.1"; exon_number "3"; scaffold_37305 StringTie exon 2917 3135 1000 . . gene_id "MSTRG.77157"; transcript_id "MSTRG.77157.1"; exon_number "1"; scaffold_3737 StringTie exon 13501 13540 1000 + . gene_id "MSTRG.77208"; transcript_id "MSTRG.77208.2"; exon_number "1"; scaffold_3737 StringTie exon 16554 16705 1000 + . gene_id "MSTRG.77208"; transcript_id "MSTRG.77208.2"; exon_number "2"; scaffold_3737 StringTie exon 16988 17230 1000 + . gene_id "MSTRG.77208"; transcript_id "MSTRG.77208.2"; exon_number "3"; scaffold_3737 StringTie exon 17827 17887 1000 + . gene_id "MSTRG.77208"; transcript_id "MSTRG.77208.2"; exon_number "4"; scaffold_3737 StringTie exon 22016 22216 1000 . . gene_id "MSTRG.77213"; transcript_id "MSTRG.77213.1"; exon_number "1"; scaffold_3738 StringTie exon 11987 12189 1000 . . gene_id "MSTRG.77228"; transcript_id "MSTRG.77228.1"; exon_number "1"; scaffold_3738 StringTie exon 34326 34582 1000 . . gene_id "MSTRG.77232"; transcript_id "MSTRG.77232.1"; exon_number "1"; scaffold_374 StringTie exon 164159 164379 1000 . . gene_id "MSTRG.77252"; transcript_id "MSTRG.77252.1"; exon_number "1"; scaffold_374 StringTie exon 318804 319070 1000 . . gene_id "MSTRG.77268"; transcript_id "MSTRG.77268.1"; exon_number "1"; scaffold_374 StringTie exon 459640 460256 1000 . . gene_id "MSTRG.77278"; transcript_id "MSTRG.77278.1"; exon_number "1"; scaffold_374 StringTie exon 729488 729740 1000 . . gene_id "MSTRG.77308"; transcript_id "MSTRG.77308.1"; exon_number "1"; scaffold_374 StringTie exon 732643 733422 1000 . . gene_id "MSTRG.77311"; transcript_id "MSTRG.77311.1"; exon_number "1"; scaffold_374 StringTie exon 749075 749281 1000 . . gene_id "MSTRG.77318"; transcript_id "MSTRG.77318.1"; exon_number "1"; scaffold_374 StringTie exon 779809 780126 1000 . . gene_id "MSTRG.77323"; transcript_id "MSTRG.77323.1"; exon_number "1"; scaffold_374 StringTie exon 781828 782060 1000 . . gene_id "MSTRG.77325"; transcript_id "MSTRG.77325.1"; exon_number "1"; scaffold_374 StringTie exon 812037 812246 1000 . . gene_id "MSTRG.77328"; transcript_id "MSTRG.77328.1"; exon_number "1"; scaffold_374 StringTie exon 881038 881314 1000 . . gene_id "MSTRG.77337"; transcript_id "MSTRG.77337.1"; exon_number "1"; scaffold_37401 StringTie exon 412 682 1000 . . gene_id "MSTRG.77343"; transcript_id "MSTRG.77343.1"; exon_number "1"; scaffold_37423 StringTie exon 252 503 1000 . . gene_id "MSTRG.77362"; transcript_id "MSTRG.77362.1"; exon_number "1"; scaffold_37425 StringTie exon 3287 3507 1000 . . gene_id "MSTRG.77363"; transcript_id "MSTRG.77363.1"; exon_number "1"; scaffold_37437 StringTie exon 3122 3426 1000 . . gene_id "MSTRG.77373"; transcript_id "MSTRG.77373.1"; exon_number "1"; scaffold_3745 StringTie exon 26225 26262 1000 - . gene_id "MSTRG.77383"; transcript_id "MSTRG.77383.1"; exon_number "1"; scaffold_3745 StringTie exon 26710 26955 1000 - . gene_id "MSTRG.77383"; transcript_id "MSTRG.77383.1"; exon_number "2"; scaffold_3745 StringTie exon 27302 27379 1000 - . gene_id "MSTRG.77383"; transcript_id "MSTRG.77383.1"; exon_number "3"; scaffold_3745 StringTie exon 27551 27603 1000 - . gene_id "MSTRG.77384"; transcript_id "MSTRG.77384.1"; exon_number "1"; scaffold_3745 StringTie exon 27708 27760 1000 - . gene_id "MSTRG.77384"; transcript_id "MSTRG.77384.1"; exon_number "2"; scaffold_3745 StringTie exon 28038 28206 1000 - . gene_id "MSTRG.77384"; transcript_id "MSTRG.77384.1"; exon_number "3"; scaffold_3745 StringTie exon 28408 28537 1000 - . gene_id "MSTRG.77384"; transcript_id "MSTRG.77384.1"; exon_number "4"; scaffold_375 StringTie exon 176244 176472 1000 . . gene_id "MSTRG.77430"; transcript_id "MSTRG.77430.1"; exon_number "1"; scaffold_375 StringTie exon 336825 337065 1000 - . gene_id "MSTRG.77443"; transcript_id "MSTRG.77443.1"; exon_number "1"; scaffold_375 StringTie exon 337163 337282 1000 - . gene_id "MSTRG.77443"; transcript_id "MSTRG.77443.1"; exon_number "2"; scaffold_3750 StringTie exon 23118 23334 1000 . . gene_id "MSTRG.77465"; transcript_id "MSTRG.77465.1"; exon_number "1"; scaffold_37520 StringTie exon 408 631 1000 . . gene_id "MSTRG.77477"; transcript_id "MSTRG.77477.1"; exon_number "1"; scaffold_37529 StringTie exon 2000 2634 1000 . . gene_id "MSTRG.77481"; transcript_id "MSTRG.77481.1"; exon_number "1"; scaffold_37529 StringTie exon 3202 3450 1000 . . gene_id "MSTRG.77482"; transcript_id "MSTRG.77482.1"; exon_number "1"; scaffold_3753 StringTie exon 28145 28416 1000 . . gene_id "MSTRG.77485"; transcript_id "MSTRG.77485.1"; exon_number "1"; scaffold_3753 StringTie exon 36181 36511 1000 . . gene_id "MSTRG.77488"; transcript_id "MSTRG.77488.1"; exon_number "1"; scaffold_3753 StringTie exon 50679 50724 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "1"; scaffold_3753 StringTie exon 50863 50993 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "2"; scaffold_3753 StringTie exon 51149 51248 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "3"; scaffold_3753 StringTie exon 51392 51513 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "4"; scaffold_3753 StringTie exon 53719 53846 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "5"; scaffold_3753 StringTie exon 54048 54157 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "6"; scaffold_3753 StringTie exon 54336 54421 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "7"; scaffold_3753 StringTie exon 54695 54778 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "8"; scaffold_3753 StringTie exon 54893 54989 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "9"; scaffold_3753 StringTie exon 55087 55182 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "10"; scaffold_3753 StringTie exon 55870 56000 1000 - . gene_id "MSTRG.77493"; transcript_id "MSTRG.77493.1"; exon_number "11"; scaffold_37559 StringTie exon 479 758 1000 . . gene_id "MSTRG.77516"; transcript_id "MSTRG.77516.1"; exon_number "1"; scaffold_3756 StringTie exon 50885 50897 1000 - . gene_id "MSTRG.77525"; transcript_id "MSTRG.77525.1"; exon_number "1"; scaffold_3756 StringTie exon 51018 51273 1000 - . gene_id "MSTRG.77525"; transcript_id "MSTRG.77525.1"; exon_number "2"; scaffold_3756 StringTie exon 51373 51443 1000 - . gene_id "MSTRG.77525"; transcript_id "MSTRG.77525.1"; exon_number "3"; scaffold_3756 StringTie exon 51623 51752 1000 - . gene_id "MSTRG.77525"; transcript_id "MSTRG.77525.1"; exon_number "4"; scaffold_3756 StringTie exon 51835 52251 1000 - . gene_id "MSTRG.77525"; transcript_id "MSTRG.77525.1"; exon_number "5"; scaffold_376 StringTie exon 5559 5907 1000 . . gene_id "MSTRG.77548"; transcript_id "MSTRG.77548.1"; exon_number "1"; scaffold_376 StringTie exon 137806 138110 1000 + . gene_id "MSTRG.77567"; transcript_id "MSTRG.77567.1"; exon_number "1"; scaffold_376 StringTie exon 145614 145724 1000 + . gene_id "MSTRG.77567"; transcript_id "MSTRG.77567.1"; exon_number "2"; scaffold_376 StringTie exon 146179 148350 1000 + . gene_id "MSTRG.77567"; transcript_id "MSTRG.77567.1"; exon_number "3"; scaffold_376 StringTie exon 198863 198921 1000 + . gene_id "MSTRG.77571"; transcript_id "MSTRG.77571.1"; exon_number "1"; scaffold_376 StringTie exon 199170 199248 1000 + . gene_id "MSTRG.77571"; transcript_id "MSTRG.77571.1"; exon_number "2"; scaffold_376 StringTie exon 201308 201417 1000 + . gene_id "MSTRG.77571"; transcript_id "MSTRG.77571.1"; exon_number "3"; scaffold_376 StringTie exon 201580 201705 1000 + . gene_id "MSTRG.77571"; transcript_id "MSTRG.77571.1"; exon_number "4"; scaffold_376 StringTie exon 203028 203134 1000 + . gene_id "MSTRG.77571"; transcript_id "MSTRG.77571.1"; exon_number "5"; scaffold_376 StringTie exon 203711 203892 1000 + . gene_id "MSTRG.77571"; transcript_id "MSTRG.77571.1"; exon_number "6"; scaffold_376 StringTie exon 205584 207010 1000 + . gene_id "MSTRG.77571"; transcript_id "MSTRG.77571.1"; exon_number "7"; scaffold_376 StringTie exon 318503 318725 1000 . . gene_id "MSTRG.77591"; transcript_id "MSTRG.77591.1"; exon_number "1"; scaffold_376 StringTie exon 642830 643228 1000 . . gene_id "MSTRG.77613"; transcript_id "MSTRG.77613.1"; exon_number "1"; scaffold_376 StringTie exon 809586 810545 1000 - . gene_id "MSTRG.77621"; transcript_id "MSTRG.77621.1"; exon_number "1"; scaffold_376 StringTie exon 811073 811337 1000 - . gene_id "MSTRG.77621"; transcript_id "MSTRG.77621.1"; exon_number "2"; scaffold_376 StringTie exon 812738 812813 1000 - . gene_id "MSTRG.77621"; transcript_id "MSTRG.77621.1"; exon_number "3"; scaffold_376 StringTie exon 883453 885286 1000 - . gene_id "MSTRG.77627"; transcript_id "MSTRG.77627.1"; exon_number "1"; scaffold_376 StringTie exon 885431 886137 1000 - . gene_id "MSTRG.77627"; transcript_id "MSTRG.77627.1"; exon_number "2"; scaffold_376 StringTie exon 893424 893511 1000 - . gene_id "MSTRG.77627"; transcript_id "MSTRG.77627.1"; exon_number "3"; scaffold_376 StringTie exon 893959 893991 1000 - . gene_id "MSTRG.77627"; transcript_id "MSTRG.77627.1"; exon_number "4"; scaffold_376 StringTie exon 896565 896740 1000 - . gene_id "MSTRG.77627"; transcript_id "MSTRG.77627.1"; exon_number "5"; scaffold_3762 StringTie exon 2155 2471 1000 - . gene_id "MSTRG.77642"; transcript_id "MSTRG.77642.1"; exon_number "1"; scaffold_3762 StringTie exon 2656 2747 1000 - . gene_id "MSTRG.77642"; transcript_id "MSTRG.77642.1"; exon_number "2"; scaffold_3762 StringTie exon 43475 43906 1000 . . gene_id "MSTRG.77650"; transcript_id "MSTRG.77650.1"; exon_number "1"; scaffold_3764 StringTie exon 33584 33803 1000 . . gene_id "MSTRG.77665"; transcript_id "MSTRG.77665.1"; exon_number "1"; scaffold_3766 StringTie exon 5246 5483 1000 . . gene_id "MSTRG.77680"; transcript_id "MSTRG.77680.1"; exon_number "1"; scaffold_3769 StringTie exon 44795 45030 1000 . . gene_id "MSTRG.77704"; transcript_id "MSTRG.77704.1"; exon_number "1"; scaffold_377 StringTie exon 78946 79248 1000 - . gene_id "MSTRG.77712"; transcript_id "MSTRG.77712.1"; exon_number "1"; scaffold_377 StringTie exon 396375 396580 1000 . . gene_id "MSTRG.77725"; transcript_id "MSTRG.77725.1"; exon_number "1"; scaffold_377 StringTie exon 404944 405059 1000 + . gene_id "MSTRG.77726"; transcript_id "MSTRG.77726.1"; exon_number "1"; scaffold_377 StringTie exon 426228 426345 1000 + . gene_id "MSTRG.77726"; transcript_id "MSTRG.77726.1"; exon_number "2"; scaffold_377 StringTie exon 427966 428116 1000 + . gene_id "MSTRG.77726"; transcript_id "MSTRG.77726.1"; exon_number "3"; scaffold_377 StringTie exon 430967 431126 1000 + . gene_id "MSTRG.77726"; transcript_id "MSTRG.77726.1"; exon_number "4"; scaffold_377 StringTie exon 431533 431760 1000 + . gene_id "MSTRG.77726"; transcript_id "MSTRG.77726.1"; exon_number "5"; scaffold_377 StringTie exon 433303 433329 1000 + . gene_id "MSTRG.77726"; transcript_id "MSTRG.77726.1"; exon_number "6"; scaffold_377 StringTie exon 615241 615524 1000 . . gene_id "MSTRG.77736"; transcript_id "MSTRG.77736.1"; exon_number "1"; scaffold_377 StringTie exon 645945 646151 1000 . . gene_id "MSTRG.77739"; transcript_id "MSTRG.77739.1"; exon_number "1"; scaffold_377 StringTie exon 839751 839954 1000 . . gene_id "MSTRG.77755"; transcript_id "MSTRG.77755.1"; exon_number "1"; scaffold_37725 StringTie exon 2045 2264 1000 . . gene_id "MSTRG.77786"; transcript_id "MSTRG.77786.1"; exon_number "1"; scaffold_3773 StringTie exon 24021 24095 1000 + . gene_id "MSTRG.77793"; transcript_id "MSTRG.77793.1"; exon_number "1"; scaffold_3773 StringTie exon 24238 24384 1000 + . gene_id "MSTRG.77793"; transcript_id "MSTRG.77793.1"; exon_number "2"; scaffold_3773 StringTie exon 24628 24711 1000 + . gene_id "MSTRG.77793"; transcript_id "MSTRG.77793.1"; exon_number "3"; scaffold_3773 StringTie exon 24871 24919 1000 + . gene_id "MSTRG.77793"; transcript_id "MSTRG.77793.1"; exon_number "4"; scaffold_3773 StringTie exon 51899 52117 1000 - . gene_id "MSTRG.77797"; transcript_id "MSTRG.77797.1"; exon_number "1"; scaffold_3773 StringTie exon 52256 52356 1000 - . gene_id "MSTRG.77797"; transcript_id "MSTRG.77797.1"; exon_number "2"; scaffold_3773 StringTie exon 52508 52660 1000 - . gene_id "MSTRG.77797"; transcript_id "MSTRG.77797.1"; exon_number "3"; scaffold_3773 StringTie exon 53505 53619 1000 - . gene_id "MSTRG.77797"; transcript_id "MSTRG.77797.1"; exon_number "4"; scaffold_3773 StringTie exon 53974 54074 1000 + . gene_id "MSTRG.77798"; transcript_id "MSTRG.77798.1"; exon_number "1"; scaffold_3773 StringTie exon 59489 59597 1000 + . gene_id "MSTRG.77798"; transcript_id "MSTRG.77798.1"; exon_number "2"; scaffold_3775 StringTie exon 947 1209 1000 . . gene_id "MSTRG.77803"; transcript_id "MSTRG.77803.1"; exon_number "1"; scaffold_37756 StringTie exon 2948 3452 1000 . . gene_id "MSTRG.77810"; transcript_id "MSTRG.77810.1"; exon_number "1"; scaffold_37764 StringTie exon 2200 2470 1000 . . gene_id "MSTRG.77822"; transcript_id "MSTRG.77822.1"; exon_number "1"; scaffold_3777 StringTie exon 13612 14002 1000 . . gene_id "MSTRG.77827"; transcript_id "MSTRG.77827.1"; exon_number "1"; scaffold_37786 StringTie exon 2157 2489 1000 . . gene_id "MSTRG.77840"; transcript_id "MSTRG.77840.1"; exon_number "1"; scaffold_378 StringTie exon 34429 34960 1000 - . gene_id "MSTRG.77847"; transcript_id "MSTRG.77847.1"; exon_number "1"; scaffold_378 StringTie exon 35136 35293 1000 - . gene_id "MSTRG.77847"; transcript_id "MSTRG.77847.1"; exon_number "2"; scaffold_378 StringTie exon 35411 35498 1000 - . gene_id "MSTRG.77847"; transcript_id "MSTRG.77847.1"; exon_number "3"; scaffold_378 StringTie exon 36040 36166 1000 - . gene_id "MSTRG.77847"; transcript_id "MSTRG.77847.1"; exon_number "4"; scaffold_378 StringTie exon 36513 36623 1000 - . gene_id "MSTRG.77847"; transcript_id "MSTRG.77847.1"; exon_number "5"; scaffold_378 StringTie exon 37331 37580 1000 - . gene_id "MSTRG.77847"; transcript_id "MSTRG.77847.1"; exon_number "6"; scaffold_378 StringTie exon 689856 690541 1000 + . gene_id "MSTRG.77877"; transcript_id "MSTRG.77877.1"; exon_number "1"; scaffold_37845 StringTie exon 1988 2215 1000 . . gene_id "MSTRG.77929"; transcript_id "MSTRG.77929.1"; exon_number "1"; scaffold_3787 StringTie exon 57965 58167 1000 . . gene_id "MSTRG.77959"; transcript_id "MSTRG.77959.1"; exon_number "1"; scaffold_37875 StringTie exon 1112 1312 1000 . . gene_id "MSTRG.77961"; transcript_id "MSTRG.77961.1"; exon_number "1"; scaffold_37878 StringTie exon 2188 2726 1000 . . gene_id "MSTRG.77964"; transcript_id "MSTRG.77964.1"; exon_number "1"; scaffold_37882 StringTie exon 539 922 1000 - . gene_id "MSTRG.77967"; transcript_id "MSTRG.77967.1"; exon_number "1"; scaffold_37882 StringTie exon 1746 1835 1000 - . gene_id "MSTRG.77967"; transcript_id "MSTRG.77967.1"; exon_number "2"; scaffold_37888 StringTie exon 2165 2739 1000 . . gene_id "MSTRG.77972"; transcript_id "MSTRG.77972.1"; exon_number "1"; scaffold_3789 StringTie exon 7680 7822 1000 + . gene_id "MSTRG.77973"; transcript_id "MSTRG.77973.1"; exon_number "1"; scaffold_3789 StringTie exon 8054 8219 1000 + . gene_id "MSTRG.77973"; transcript_id "MSTRG.77973.1"; exon_number "2"; scaffold_3789 StringTie exon 11831 11953 1000 + . gene_id "MSTRG.77973"; transcript_id "MSTRG.77973.1"; exon_number "3"; scaffold_3789 StringTie exon 12065 12181 1000 + . gene_id "MSTRG.77973"; transcript_id "MSTRG.77973.1"; exon_number "4"; scaffold_3789 StringTie exon 12375 12457 1000 + . gene_id "MSTRG.77973"; transcript_id "MSTRG.77973.1"; exon_number "5"; scaffold_37896 StringTie exon 250 575 1000 - . gene_id "MSTRG.77980"; transcript_id "MSTRG.77980.1"; exon_number "1"; scaffold_379 StringTie exon 42256 42718 1000 . . gene_id "MSTRG.77983"; transcript_id "MSTRG.77983.1"; exon_number "1"; scaffold_379 StringTie exon 232815 233113 1000 . . gene_id "MSTRG.78015"; transcript_id "MSTRG.78015.1"; exon_number "1"; scaffold_379 StringTie exon 255223 255260 1000 + . gene_id "MSTRG.78019"; transcript_id "MSTRG.78019.1"; exon_number "1"; scaffold_379 StringTie exon 255362 255462 1000 + . gene_id "MSTRG.78019"; transcript_id "MSTRG.78019.1"; exon_number "2"; scaffold_379 StringTie exon 255571 255614 1000 + . gene_id "MSTRG.78019"; transcript_id "MSTRG.78019.1"; exon_number "3"; scaffold_379 StringTie exon 255777 255893 1000 + . gene_id "MSTRG.78019"; transcript_id "MSTRG.78019.1"; exon_number "4"; scaffold_379 StringTie exon 256023 256148 1000 + . gene_id "MSTRG.78019"; transcript_id "MSTRG.78019.1"; exon_number "5"; scaffold_379 StringTie exon 256232 256250 1000 + . gene_id "MSTRG.78019"; transcript_id "MSTRG.78019.1"; exon_number "6"; scaffold_379 StringTie exon 439375 439560 1000 + . gene_id "MSTRG.78032"; transcript_id "MSTRG.78032.1"; exon_number "1"; scaffold_379 StringTie exon 439723 440480 1000 + . gene_id "MSTRG.78032"; transcript_id "MSTRG.78032.1"; exon_number "2"; scaffold_379 StringTie exon 657248 657266 1000 + . gene_id "MSTRG.78054"; transcript_id "MSTRG.78054.1"; exon_number "1"; scaffold_379 StringTie exon 657645 657928 1000 + . gene_id "MSTRG.78054"; transcript_id "MSTRG.78054.1"; exon_number "2"; scaffold_379 StringTie exon 658136 658352 1000 + . gene_id "MSTRG.78054"; transcript_id "MSTRG.78054.1"; exon_number "3"; scaffold_379 StringTie exon 658430 658626 1000 + . gene_id "MSTRG.78054"; transcript_id "MSTRG.78054.1"; exon_number "4"; scaffold_379 StringTie exon 658795 658989 1000 + . gene_id "MSTRG.78054"; transcript_id "MSTRG.78054.1"; exon_number "5"; scaffold_379 StringTie exon 660540 660644 1000 + . gene_id "MSTRG.78054"; transcript_id "MSTRG.78054.1"; exon_number "6"; scaffold_379 StringTie exon 660771 661679 1000 + . gene_id "MSTRG.78054"; transcript_id "MSTRG.78054.1"; exon_number "7"; scaffold_3792 StringTie exon 24555 26279 1000 . . gene_id "MSTRG.78089"; transcript_id "MSTRG.78089.1"; exon_number "1"; scaffold_3794 StringTie exon 51257 51831 1000 . . gene_id "MSTRG.78109"; transcript_id "MSTRG.78109.1"; exon_number "1"; scaffold_37943 StringTie exon 2036 2316 1000 . . gene_id "MSTRG.78111"; transcript_id "MSTRG.78111.1"; exon_number "1"; scaffold_37950 StringTie exon 1400 1934 1000 . . gene_id "MSTRG.78115"; transcript_id "MSTRG.78115.1"; exon_number "1"; scaffold_38 StringTie exon 108645 108705 1000 - . gene_id "MSTRG.78141"; transcript_id "MSTRG.78141.1"; exon_number "1"; scaffold_38 StringTie exon 108857 108942 1000 - . gene_id "MSTRG.78141"; transcript_id "MSTRG.78141.1"; exon_number "2"; scaffold_38 StringTie exon 109522 109575 1000 - . gene_id "MSTRG.78141"; transcript_id "MSTRG.78141.1"; exon_number "3"; scaffold_38 StringTie exon 217468 217515 1000 + . gene_id "MSTRG.78150"; transcript_id "MSTRG.78150.1"; exon_number "1"; scaffold_38 StringTie exon 218961 219118 1000 + . gene_id "MSTRG.78150"; transcript_id "MSTRG.78150.1"; exon_number "2"; scaffold_38 StringTie exon 244333 244628 1000 . . gene_id "MSTRG.78153"; transcript_id "MSTRG.78153.1"; exon_number "1"; scaffold_38 StringTie exon 245418 246090 1000 . . gene_id "MSTRG.78154"; transcript_id "MSTRG.78154.1"; exon_number "1"; scaffold_38 StringTie exon 588047 588410 1000 . . gene_id "MSTRG.78176"; transcript_id "MSTRG.78176.1"; exon_number "1"; scaffold_38 StringTie exon 1176677 1176975 1000 . . gene_id "MSTRG.78214"; transcript_id "MSTRG.78214.1"; exon_number "1"; scaffold_38 StringTie exon 1419542 1419858 1000 . . gene_id "MSTRG.78226"; transcript_id "MSTRG.78226.1"; exon_number "1"; scaffold_38 StringTie exon 1651320 1651553 1000 . . gene_id "MSTRG.78237"; transcript_id "MSTRG.78237.1"; exon_number "1"; scaffold_38 StringTie exon 1684748 1685188 1000 . . gene_id "MSTRG.78239"; transcript_id "MSTRG.78239.1"; exon_number "1"; scaffold_38 StringTie exon 1931430 1931687 1000 . . gene_id "MSTRG.78255"; transcript_id "MSTRG.78255.1"; exon_number "1"; scaffold_38 StringTie exon 1943427 1943663 1000 . . gene_id "MSTRG.78257"; transcript_id "MSTRG.78257.1"; exon_number "1"; scaffold_38 StringTie exon 2112265 2112888 1000 . . gene_id "MSTRG.78270"; transcript_id "MSTRG.78270.1"; exon_number "1"; scaffold_38 StringTie exon 2162447 2162789 1000 . . gene_id "MSTRG.78276"; transcript_id "MSTRG.78276.1"; exon_number "1"; scaffold_380 StringTie exon 395040 395574 1000 . . gene_id "MSTRG.78321"; transcript_id "MSTRG.78321.1"; exon_number "1"; scaffold_380 StringTie exon 539537 541737 1000 . . gene_id "MSTRG.78338"; transcript_id "MSTRG.78338.1"; exon_number "1"; scaffold_380 StringTie exon 544812 545065 1000 . . gene_id "MSTRG.78339"; transcript_id "MSTRG.78339.1"; exon_number "1"; scaffold_380 StringTie exon 746689 747136 1000 . . gene_id "MSTRG.78356"; transcript_id "MSTRG.78356.1"; exon_number "1"; scaffold_3800 StringTie exon 28266 28734 1000 . . gene_id "MSTRG.78374"; transcript_id "MSTRG.78374.1"; exon_number "1"; scaffold_3801 StringTie exon 58222 58870 1000 . . gene_id "MSTRG.78387"; transcript_id "MSTRG.78387.1"; exon_number "1"; scaffold_38028 StringTie exon 12 723 1000 . . gene_id "MSTRG.78396"; transcript_id "MSTRG.78396.1"; exon_number "1"; scaffold_3804 StringTie exon 42091 42619 1000 . . gene_id "MSTRG.78407"; transcript_id "MSTRG.78407.1"; exon_number "1"; scaffold_3805 StringTie exon 52975 53332 1000 . . gene_id "MSTRG.78416"; transcript_id "MSTRG.78416.1"; exon_number "1"; scaffold_3805 StringTie exon 54172 54447 1000 . . gene_id "MSTRG.78417"; transcript_id "MSTRG.78417.1"; exon_number "1"; scaffold_38052 StringTie exon 1473 1728 1000 . . gene_id "MSTRG.78419"; transcript_id "MSTRG.78419.1"; exon_number "1"; scaffold_3806 StringTie exon 30342 30614 1000 . . gene_id "MSTRG.78427"; transcript_id "MSTRG.78427.1"; exon_number "1"; scaffold_38075 StringTie exon 2988 3249 1000 . . gene_id "MSTRG.78444"; transcript_id "MSTRG.78444.1"; exon_number "1"; scaffold_3809 StringTie exon 27447 27648 1000 . . gene_id "MSTRG.78461"; transcript_id "MSTRG.78461.1"; exon_number "1"; scaffold_381 StringTie exon 302246 302825 1000 . . gene_id "MSTRG.78490"; transcript_id "MSTRG.78490.1"; exon_number "1"; scaffold_381 StringTie exon 687704 687965 1000 . . gene_id "MSTRG.78512"; transcript_id "MSTRG.78512.1"; exon_number "1"; scaffold_3812 StringTie exon 40283 40363 1000 - . gene_id "MSTRG.78542"; transcript_id "MSTRG.78542.1"; exon_number "1"; scaffold_3812 StringTie exon 41047 41233 1000 - . gene_id "MSTRG.78542"; transcript_id "MSTRG.78542.1"; exon_number "2"; scaffold_3812 StringTie exon 41599 41798 1000 - . gene_id "MSTRG.78542"; transcript_id "MSTRG.78542.1"; exon_number "3"; scaffold_3812 StringTie exon 42312 42337 1000 - . gene_id "MSTRG.78542"; transcript_id "MSTRG.78542.1"; exon_number "4"; scaffold_3813 StringTie exon 19701 20155 1000 . . gene_id "MSTRG.78550"; transcript_id "MSTRG.78550.1"; exon_number "1"; scaffold_3813 StringTie exon 42024 42501 1000 + . gene_id "MSTRG.78553"; transcript_id "MSTRG.78553.1"; exon_number "1"; scaffold_3813 StringTie exon 42968 43082 1000 + . gene_id "MSTRG.78553"; transcript_id "MSTRG.78553.1"; exon_number "2"; scaffold_3813 StringTie exon 43843 43940 1000 + . gene_id "MSTRG.78553"; transcript_id "MSTRG.78553.1"; exon_number "3"; scaffold_3813 StringTie exon 44099 44209 1000 + . gene_id "MSTRG.78553"; transcript_id "MSTRG.78553.1"; exon_number "4"; scaffold_3813 StringTie exon 45293 45458 1000 + . gene_id "MSTRG.78553"; transcript_id "MSTRG.78553.1"; exon_number "5"; scaffold_3813 StringTie exon 45949 46197 1000 + . gene_id "MSTRG.78553"; transcript_id "MSTRG.78553.1"; exon_number "6"; scaffold_3813 StringTie exon 47103 47314 1000 . . gene_id "MSTRG.78554"; transcript_id "MSTRG.78554.1"; exon_number "1"; scaffold_3814 StringTie exon 33890 34341 1000 + . gene_id "MSTRG.78560"; transcript_id "MSTRG.78560.2"; exon_number "1"; scaffold_3814 StringTie exon 34400 34477 1000 + . gene_id "MSTRG.78560"; transcript_id "MSTRG.78560.2"; exon_number "2"; scaffold_3815 StringTie exon 46128 46568 1000 . . gene_id "MSTRG.78570"; transcript_id "MSTRG.78570.1"; exon_number "1"; scaffold_382 StringTie exon 124739 124982 1000 . . gene_id "MSTRG.78606"; transcript_id "MSTRG.78606.1"; exon_number "1"; scaffold_382 StringTie exon 197519 197761 1000 . . gene_id "MSTRG.78614"; transcript_id "MSTRG.78614.1"; exon_number "1"; scaffold_382 StringTie exon 393732 393968 1000 . . gene_id "MSTRG.78624"; transcript_id "MSTRG.78624.1"; exon_number "1"; scaffold_382 StringTie exon 434285 434513 1000 . . gene_id "MSTRG.78625"; transcript_id "MSTRG.78625.1"; exon_number "1"; scaffold_382 StringTie exon 758875 759328 1000 . . gene_id "MSTRG.78642"; transcript_id "MSTRG.78642.1"; exon_number "1"; scaffold_3820 StringTie exon 27131 27608 1000 . . gene_id "MSTRG.78651"; transcript_id "MSTRG.78651.1"; exon_number "1"; scaffold_38251 StringTie exon 2349 2695 1000 . . gene_id "MSTRG.78692"; transcript_id "MSTRG.78692.1"; exon_number "1"; scaffold_38260 StringTie exon 2599 2824 1000 . . gene_id "MSTRG.78697"; transcript_id "MSTRG.78697.1"; exon_number "1"; scaffold_38261 StringTie exon 36 817 1000 . . gene_id "MSTRG.78698"; transcript_id "MSTRG.78698.1"; exon_number "1"; scaffold_3828 StringTie exon 34642 34889 1000 . . gene_id "MSTRG.78708"; transcript_id "MSTRG.78708.1"; exon_number "1"; scaffold_38287 StringTie exon 22 298 1000 . . gene_id "MSTRG.78710"; transcript_id "MSTRG.78710.1"; exon_number "1"; scaffold_38297 StringTie exon 1475 1708 1000 . . gene_id "MSTRG.78722"; transcript_id "MSTRG.78722.1"; exon_number "1"; scaffold_383 StringTie exon 548512 548738 1000 . . gene_id "MSTRG.78782"; transcript_id "MSTRG.78782.1"; exon_number "1"; scaffold_383 StringTie exon 569673 569893 1000 . . gene_id "MSTRG.78784"; transcript_id "MSTRG.78784.1"; exon_number "1"; scaffold_383 StringTie exon 823982 824273 1000 . . gene_id "MSTRG.78798"; transcript_id "MSTRG.78798.1"; exon_number "1"; scaffold_383 StringTie exon 874294 874573 1000 . . gene_id "MSTRG.78802"; transcript_id "MSTRG.78802.1"; exon_number "1"; scaffold_38363 StringTie exon 1617 1984 1000 . . gene_id "MSTRG.78866"; transcript_id "MSTRG.78866.1"; exon_number "1"; scaffold_38366 StringTie exon 1517 1681 1000 + . gene_id "MSTRG.78870"; transcript_id "MSTRG.78870.1"; exon_number "1"; scaffold_38366 StringTie exon 2204 2258 1000 + . gene_id "MSTRG.78870"; transcript_id "MSTRG.78870.1"; exon_number "2"; scaffold_38366 StringTie exon 2880 2992 1000 + . gene_id "MSTRG.78870"; transcript_id "MSTRG.78870.1"; exon_number "3"; scaffold_3839 StringTie exon 26479 26720 1000 - . gene_id "MSTRG.78892"; transcript_id "MSTRG.78892.1"; exon_number "1"; scaffold_3839 StringTie exon 26884 27009 1000 - . gene_id "MSTRG.78892"; transcript_id "MSTRG.78892.1"; exon_number "2"; scaffold_384 StringTie exon 7817 8184 1000 . . gene_id "MSTRG.78895"; transcript_id "MSTRG.78895.1"; exon_number "1"; scaffold_384 StringTie exon 172529 172731 1000 - . gene_id "MSTRG.78917"; transcript_id "MSTRG.78917.1"; exon_number "1"; scaffold_384 StringTie exon 172914 173234 1000 - . gene_id "MSTRG.78917"; transcript_id "MSTRG.78917.1"; exon_number "2"; scaffold_384 StringTie exon 173399 173439 1000 - . gene_id "MSTRG.78917"; transcript_id "MSTRG.78917.1"; exon_number "3"; scaffold_384 StringTie exon 193395 193732 1000 . . gene_id "MSTRG.78921"; transcript_id "MSTRG.78921.1"; exon_number "1"; scaffold_384 StringTie exon 204718 204951 1000 . . gene_id "MSTRG.78922"; transcript_id "MSTRG.78922.1"; exon_number "1"; scaffold_384 StringTie exon 349116 349354 1000 . . gene_id "MSTRG.78934"; transcript_id "MSTRG.78934.1"; exon_number "1"; scaffold_384 StringTie exon 452303 452510 1000 . . gene_id "MSTRG.78949"; transcript_id "MSTRG.78949.1"; exon_number "1"; scaffold_384 StringTie exon 700526 700777 1000 . . gene_id "MSTRG.78971"; transcript_id "MSTRG.78971.1"; exon_number "1"; scaffold_384 StringTie exon 703611 703749 1000 + . gene_id "MSTRG.78972"; transcript_id "MSTRG.78972.1"; exon_number "1"; scaffold_384 StringTie exon 704219 704352 1000 + . gene_id "MSTRG.78972"; transcript_id "MSTRG.78972.1"; exon_number "2"; scaffold_384 StringTie exon 705540 705685 1000 + . gene_id "MSTRG.78972"; transcript_id "MSTRG.78972.1"; exon_number "3"; scaffold_384 StringTie exon 705788 705980 1000 + . gene_id "MSTRG.78972"; transcript_id "MSTRG.78972.1"; exon_number "4"; scaffold_384 StringTie exon 706433 706545 1000 + . gene_id "MSTRG.78972"; transcript_id "MSTRG.78972.1"; exon_number "5"; scaffold_384 StringTie exon 706748 706900 1000 + . gene_id "MSTRG.78972"; transcript_id "MSTRG.78972.1"; exon_number "6"; scaffold_384 StringTie exon 707065 707852 1000 + . gene_id "MSTRG.78972"; transcript_id "MSTRG.78972.1"; exon_number "7"; scaffold_384 StringTie exon 799638 800262 1000 - . gene_id "MSTRG.78979"; transcript_id "MSTRG.78979.2"; exon_number "1"; scaffold_384 StringTie exon 801265 801383 1000 - . gene_id "MSTRG.78979"; transcript_id "MSTRG.78979.2"; exon_number "2"; scaffold_384 StringTie exon 801571 801714 1000 - . gene_id "MSTRG.78979"; transcript_id "MSTRG.78979.2"; exon_number "3"; scaffold_384 StringTie exon 807735 807875 1000 - . gene_id "MSTRG.78979"; transcript_id "MSTRG.78979.2"; exon_number "4"; scaffold_384 StringTie exon 808122 808178 1000 - . gene_id "MSTRG.78979"; transcript_id "MSTRG.78979.2"; exon_number "5"; scaffold_384 StringTie exon 808263 808331 1000 - . gene_id "MSTRG.78979"; transcript_id "MSTRG.78979.2"; exon_number "6"; scaffold_384 StringTie exon 808453 808541 1000 - . gene_id "MSTRG.78979"; transcript_id "MSTRG.78979.2"; exon_number "7"; scaffold_384 StringTie exon 819486 819576 1000 - . gene_id "MSTRG.78979"; transcript_id "MSTRG.78979.2"; exon_number "8"; scaffold_384 StringTie exon 830819 831605 1000 . . gene_id "MSTRG.78981"; transcript_id "MSTRG.78981.1"; exon_number "1"; scaffold_38411 StringTie exon 1835 1983 1000 + . gene_id "MSTRG.79006"; transcript_id "MSTRG.79006.1"; exon_number "1"; scaffold_38411 StringTie exon 2089 2201 1000 + . gene_id "MSTRG.79006"; transcript_id "MSTRG.79006.1"; exon_number "2"; scaffold_3845 StringTie exon 34508 35984 1000 . . gene_id "MSTRG.79037"; transcript_id "MSTRG.79037.1"; exon_number "1"; scaffold_385 StringTie exon 208031 208098 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "1"; scaffold_385 StringTie exon 215452 215498 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "2"; scaffold_385 StringTie exon 215595 215645 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "3"; scaffold_385 StringTie exon 215890 215953 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "4"; scaffold_385 StringTie exon 216217 216270 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "5"; scaffold_385 StringTie exon 216508 216615 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "6"; scaffold_385 StringTie exon 216822 216871 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "7"; scaffold_385 StringTie exon 217198 217276 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "8"; scaffold_385 StringTie exon 217633 217731 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "9"; scaffold_385 StringTie exon 218241 218301 1000 + . gene_id "MSTRG.79091"; transcript_id "MSTRG.79091.1"; exon_number "10"; scaffold_385 StringTie exon 569960 570128 1000 + . gene_id "MSTRG.79118"; transcript_id "MSTRG.79118.1"; exon_number "1"; scaffold_385 StringTie exon 572969 573054 1000 + . gene_id "MSTRG.79118"; transcript_id "MSTRG.79118.1"; exon_number "2"; scaffold_385 StringTie exon 573186 573309 1000 + . gene_id "MSTRG.79118"; transcript_id "MSTRG.79118.1"; exon_number "3"; scaffold_385 StringTie exon 575044 575118 1000 + . gene_id "MSTRG.79118"; transcript_id "MSTRG.79118.1"; exon_number "4"; scaffold_385 StringTie exon 575293 575455 1000 + . gene_id "MSTRG.79118"; transcript_id "MSTRG.79118.1"; exon_number "5"; scaffold_385 StringTie exon 592454 592734 1000 . . gene_id "MSTRG.79123"; transcript_id "MSTRG.79123.1"; exon_number "1"; scaffold_385 StringTie exon 755320 755603 1000 . . gene_id "MSTRG.79139"; transcript_id "MSTRG.79139.1"; exon_number "1"; scaffold_38523 StringTie exon 286 446 1000 - . gene_id "MSTRG.79163"; transcript_id "MSTRG.79163.1"; exon_number "1"; scaffold_38523 StringTie exon 2879 2977 1000 - . gene_id "MSTRG.79163"; transcript_id "MSTRG.79163.1"; exon_number "2"; scaffold_38536 StringTie exon 3215 3422 1000 . . gene_id "MSTRG.79176"; transcript_id "MSTRG.79176.1"; exon_number "1"; scaffold_3855 StringTie exon 51823 52078 1000 . . gene_id "MSTRG.79189"; transcript_id "MSTRG.79189.1"; exon_number "1"; scaffold_3858 StringTie exon 55240 55439 1000 . . gene_id "MSTRG.79218"; transcript_id "MSTRG.79218.1"; exon_number "1"; scaffold_3859 StringTie exon 2151 2761 1000 . . gene_id "MSTRG.79224"; transcript_id "MSTRG.79224.1"; exon_number "1"; scaffold_38595 StringTie exon 2760 3146 1000 . . gene_id "MSTRG.79227"; transcript_id "MSTRG.79227.1"; exon_number "1"; scaffold_386 StringTie exon 128378 128896 1000 . . gene_id "MSTRG.79239"; transcript_id "MSTRG.79239.1"; exon_number "1"; scaffold_386 StringTie exon 130713 130952 1000 . . gene_id "MSTRG.79241"; transcript_id "MSTRG.79241.1"; exon_number "1"; scaffold_386 StringTie exon 469490 470117 1000 . . gene_id "MSTRG.79265"; transcript_id "MSTRG.79265.1"; exon_number "1"; scaffold_386 StringTie exon 499823 500216 1000 - . gene_id "MSTRG.79273"; transcript_id "MSTRG.79273.3"; exon_number "1"; scaffold_386 StringTie exon 502160 502494 1000 - . gene_id "MSTRG.79273"; transcript_id "MSTRG.79273.3"; exon_number "2"; scaffold_386 StringTie exon 543551 543779 1000 . . gene_id "MSTRG.79279"; transcript_id "MSTRG.79279.1"; exon_number "1"; scaffold_386 StringTie exon 780750 781048 1000 . . gene_id "MSTRG.79300"; transcript_id "MSTRG.79300.1"; exon_number "1"; scaffold_38600 StringTie exon 2026 2236 1000 . . gene_id "MSTRG.79311"; transcript_id "MSTRG.79311.1"; exon_number "1"; scaffold_38630 StringTie exon 1221 1723 1000 . . gene_id "MSTRG.79323"; transcript_id "MSTRG.79323.1"; exon_number "1"; scaffold_3865 StringTie exon 24137 24228 1000 + . gene_id "MSTRG.79337"; transcript_id "MSTRG.79337.1"; exon_number "1"; scaffold_3865 StringTie exon 24309 24523 1000 + . gene_id "MSTRG.79337"; transcript_id "MSTRG.79337.1"; exon_number "2"; scaffold_3865 StringTie exon 41980 42187 1000 . . gene_id "MSTRG.79341"; transcript_id "MSTRG.79341.1"; exon_number "1"; scaffold_3866 StringTie exon 14962 15233 1000 - . gene_id "MSTRG.79352"; transcript_id "MSTRG.79352.1"; exon_number "1"; scaffold_3869 StringTie exon 22770 23041 1000 . . gene_id "MSTRG.79374"; transcript_id "MSTRG.79374.1"; exon_number "1"; scaffold_387 StringTie exon 226572 226607 1000 + . gene_id "MSTRG.79390"; transcript_id "MSTRG.79390.1"; exon_number "1"; scaffold_387 StringTie exon 226948 227031 1000 + . gene_id "MSTRG.79390"; transcript_id "MSTRG.79390.1"; exon_number "2"; scaffold_387 StringTie exon 227381 227473 1000 + . gene_id "MSTRG.79390"; transcript_id "MSTRG.79390.1"; exon_number "3"; scaffold_387 StringTie exon 227677 227795 1000 + . gene_id "MSTRG.79390"; transcript_id "MSTRG.79390.1"; exon_number "4"; scaffold_387 StringTie exon 227932 228001 1000 + . gene_id "MSTRG.79390"; transcript_id "MSTRG.79390.1"; exon_number "5"; scaffold_387 StringTie exon 229416 229529 1000 + . gene_id "MSTRG.79390"; transcript_id "MSTRG.79390.1"; exon_number "6"; scaffold_387 StringTie exon 229703 229774 1000 + . gene_id "MSTRG.79390"; transcript_id "MSTRG.79390.1"; exon_number "7"; scaffold_387 StringTie exon 232405 232471 1000 + . gene_id "MSTRG.79390"; transcript_id "MSTRG.79390.1"; exon_number "8"; scaffold_387 StringTie exon 533041 533402 1000 . . gene_id "MSTRG.79425"; transcript_id "MSTRG.79425.1"; exon_number "1"; scaffold_387 StringTie exon 870843 871410 1000 . . gene_id "MSTRG.79448"; transcript_id "MSTRG.79448.1"; exon_number "1"; scaffold_3870 StringTie exon 46447 46575 1000 + . gene_id "MSTRG.79455"; transcript_id "MSTRG.79455.2"; exon_number "1"; scaffold_3870 StringTie exon 47429 47510 1000 + . gene_id "MSTRG.79455"; transcript_id "MSTRG.79455.2"; exon_number "2"; scaffold_3870 StringTie exon 47637 47711 1000 + . gene_id "MSTRG.79455"; transcript_id "MSTRG.79455.2"; exon_number "3"; scaffold_3870 StringTie exon 47958 48120 1000 + . gene_id "MSTRG.79455"; transcript_id "MSTRG.79455.2"; exon_number "4"; scaffold_3870 StringTie exon 48270 48368 1000 + . gene_id "MSTRG.79455"; transcript_id "MSTRG.79455.2"; exon_number "5"; scaffold_3871 StringTie exon 21091 21531 1000 . . gene_id "MSTRG.79465"; transcript_id "MSTRG.79465.1"; exon_number "1"; scaffold_3872 StringTie exon 35889 36497 1000 . . gene_id "MSTRG.79474"; transcript_id "MSTRG.79474.1"; exon_number "1"; scaffold_38756 StringTie exon 3137 3406 1000 . . gene_id "MSTRG.79494"; transcript_id "MSTRG.79494.1"; exon_number "1"; scaffold_388 StringTie exon 168238 168570 1000 . . gene_id "MSTRG.79542"; transcript_id "MSTRG.79542.1"; exon_number "1"; scaffold_388 StringTie exon 401070 401090 1000 - . gene_id "MSTRG.79565"; transcript_id "MSTRG.79565.1"; exon_number "1"; scaffold_388 StringTie exon 401207 401285 1000 - . gene_id "MSTRG.79565"; transcript_id "MSTRG.79565.1"; exon_number "2"; scaffold_388 StringTie exon 401829 402082 1000 - . gene_id "MSTRG.79565"; transcript_id "MSTRG.79565.1"; exon_number "3"; scaffold_388 StringTie exon 402599 402765 1000 - . gene_id "MSTRG.79565"; transcript_id "MSTRG.79565.1"; exon_number "4"; scaffold_388 StringTie exon 503155 503449 1000 . . gene_id "MSTRG.79575"; transcript_id "MSTRG.79575.1"; exon_number "1"; scaffold_3883 StringTie exon 22708 23493 1000 + . gene_id "MSTRG.79604"; transcript_id "MSTRG.79604.1"; exon_number "1"; scaffold_3883 StringTie exon 25914 26064 1000 + . gene_id "MSTRG.79604"; transcript_id "MSTRG.79604.1"; exon_number "2"; scaffold_3886 StringTie exon 27867 28134 1000 . . gene_id "MSTRG.79624"; transcript_id "MSTRG.79624.1"; exon_number "1"; scaffold_38871 StringTie exon 499 1062 1000 . . gene_id "MSTRG.79642"; transcript_id "MSTRG.79642.1"; exon_number "1"; scaffold_38871 StringTie exon 2350 2562 1000 . . gene_id "MSTRG.79643"; transcript_id "MSTRG.79643.1"; exon_number "1"; scaffold_38892 StringTie exon 53 374 1000 . . gene_id "MSTRG.79657"; transcript_id "MSTRG.79657.1"; exon_number "1"; scaffold_389 StringTie exon 536479 536709 1000 . . gene_id "MSTRG.79679"; transcript_id "MSTRG.79679.1"; exon_number "1"; scaffold_38903 StringTie exon 3090 3330 1000 . . gene_id "MSTRG.79712"; transcript_id "MSTRG.79712.1"; exon_number "1"; scaffold_3893 StringTie exon 36318 36544 1000 . . gene_id "MSTRG.79728"; transcript_id "MSTRG.79728.1"; exon_number "1"; scaffold_38937 StringTie exon 1711 1915 1000 . . gene_id "MSTRG.79738"; transcript_id "MSTRG.79738.1"; exon_number "1"; scaffold_3897 StringTie exon 23162 23857 1000 . . gene_id "MSTRG.79756"; transcript_id "MSTRG.79756.1"; exon_number "1"; scaffold_38970 StringTie exon 67 628 1000 . . gene_id "MSTRG.79760"; transcript_id "MSTRG.79760.1"; exon_number "1"; scaffold_38993 StringTie exon 2570 2828 1000 . . gene_id "MSTRG.79778"; transcript_id "MSTRG.79778.1"; exon_number "1"; scaffold_39 StringTie exon 252999 253223 1000 . . gene_id "MSTRG.79802"; transcript_id "MSTRG.79802.1"; exon_number "1"; scaffold_39 StringTie exon 437476 438097 1000 . . gene_id "MSTRG.79818"; transcript_id "MSTRG.79818.1"; exon_number "1"; scaffold_39 StringTie exon 444386 444455 1000 - . gene_id "MSTRG.79822"; transcript_id "MSTRG.79822.1"; exon_number "1"; scaffold_39 StringTie exon 444571 444633 1000 - . gene_id "MSTRG.79822"; transcript_id "MSTRG.79822.1"; exon_number "2"; scaffold_39 StringTie exon 444766 444870 1000 - . gene_id "MSTRG.79822"; transcript_id "MSTRG.79822.1"; exon_number "3"; scaffold_39 StringTie exon 445018 445072 1000 - . gene_id "MSTRG.79822"; transcript_id "MSTRG.79822.1"; exon_number "4"; scaffold_39 StringTie exon 445161 445345 1000 - . gene_id "MSTRG.79822"; transcript_id "MSTRG.79822.1"; exon_number "5"; scaffold_39 StringTie exon 445475 445568 1000 - . gene_id "MSTRG.79822"; transcript_id "MSTRG.79822.1"; exon_number "6"; scaffold_39 StringTie exon 621174 621422 1000 . . gene_id "MSTRG.79841"; transcript_id "MSTRG.79841.1"; exon_number "1"; scaffold_39 StringTie exon 676480 676630 1000 + . gene_id "MSTRG.79846"; transcript_id "MSTRG.79846.1"; exon_number "1"; scaffold_39 StringTie exon 677896 677944 1000 + . gene_id "MSTRG.79846"; transcript_id "MSTRG.79846.1"; exon_number "2"; scaffold_39 StringTie exon 678059 678189 1000 + . gene_id "MSTRG.79846"; transcript_id "MSTRG.79846.1"; exon_number "3"; scaffold_39 StringTie exon 729429 729781 1000 . . gene_id "MSTRG.79850"; transcript_id "MSTRG.79850.1"; exon_number "1"; scaffold_39 StringTie exon 835152 835370 1000 - . gene_id "MSTRG.79855"; transcript_id "MSTRG.79855.1"; exon_number "1"; scaffold_39 StringTie exon 835599 835811 1000 - . gene_id "MSTRG.79855"; transcript_id "MSTRG.79855.1"; exon_number "2"; scaffold_39 StringTie exon 924201 924380 1000 - . gene_id "MSTRG.79875"; transcript_id "MSTRG.79875.1"; exon_number "1"; scaffold_39 StringTie exon 937687 937841 1000 - . gene_id "MSTRG.79875"; transcript_id "MSTRG.79875.1"; exon_number "2"; scaffold_39 StringTie exon 941206 941318 1000 - . gene_id "MSTRG.79875"; transcript_id "MSTRG.79875.1"; exon_number "3"; scaffold_39 StringTie exon 942712 942934 1000 - . gene_id "MSTRG.79875"; transcript_id "MSTRG.79875.1"; exon_number "4"; scaffold_39 StringTie exon 962157 963240 1000 - . gene_id "MSTRG.79875"; transcript_id "MSTRG.79875.1"; exon_number "5"; scaffold_39 StringTie exon 1352432 1352863 1000 . . gene_id "MSTRG.79892"; transcript_id "MSTRG.79892.1"; exon_number "1"; scaffold_39 StringTie exon 1367566 1368132 1000 . . gene_id "MSTRG.79896"; transcript_id "MSTRG.79896.1"; exon_number "1"; scaffold_39 StringTie exon 1455470 1455671 1000 . . gene_id "MSTRG.79903"; transcript_id "MSTRG.79903.1"; exon_number "1"; scaffold_39 StringTie exon 2218011 2218023 1000 + . gene_id "MSTRG.79951"; transcript_id "MSTRG.79951.1"; exon_number "1"; scaffold_39 StringTie exon 2263189 2263435 1000 + . gene_id "MSTRG.79951"; transcript_id "MSTRG.79951.1"; exon_number "2"; scaffold_390 StringTie exon 26928 27753 1000 . . gene_id "MSTRG.79954"; transcript_id "MSTRG.79954.1"; exon_number "1"; scaffold_390 StringTie exon 191027 191226 1000 . . gene_id "MSTRG.79961"; transcript_id "MSTRG.79961.1"; exon_number "1"; scaffold_390 StringTie exon 379569 379792 1000 . . gene_id "MSTRG.79974"; transcript_id "MSTRG.79974.1"; exon_number "1"; scaffold_390 StringTie exon 550056 550260 1000 . . gene_id "MSTRG.79986"; transcript_id "MSTRG.79986.1"; exon_number "1"; scaffold_3901 StringTie exon 57551 57883 1000 - . gene_id "MSTRG.80020"; transcript_id "MSTRG.80020.1"; exon_number "1"; scaffold_3903 StringTie exon 6760 6981 1000 . . gene_id "MSTRG.80031"; transcript_id "MSTRG.80031.1"; exon_number "1"; scaffold_39036 StringTie exon 1424 1653 1000 . . gene_id "MSTRG.80039"; transcript_id "MSTRG.80039.1"; exon_number "1"; scaffold_3905 StringTie exon 30566 30812 1000 . . gene_id "MSTRG.80056"; transcript_id "MSTRG.80056.1"; exon_number "1"; scaffold_39062 StringTie exon 2079 2310 1000 . . gene_id "MSTRG.80065"; transcript_id "MSTRG.80065.1"; exon_number "1"; scaffold_3909 StringTie exon 1958 2170 1000 . . gene_id "MSTRG.80090"; transcript_id "MSTRG.80090.1"; exon_number "1"; scaffold_39095 StringTie exon 15 1013 1000 . . gene_id "MSTRG.80097"; transcript_id "MSTRG.80097.1"; exon_number "1"; scaffold_391 StringTie exon 63727 63931 1000 . . gene_id "MSTRG.80106"; transcript_id "MSTRG.80106.1"; exon_number "1"; scaffold_391 StringTie exon 125323 125548 1000 . . gene_id "MSTRG.80114"; transcript_id "MSTRG.80114.1"; exon_number "1"; scaffold_391 StringTie exon 236168 236222 1000 - . gene_id "MSTRG.80125"; transcript_id "MSTRG.80125.1"; exon_number "1"; scaffold_391 StringTie exon 239407 239588 1000 - . gene_id "MSTRG.80125"; transcript_id "MSTRG.80125.1"; exon_number "2"; scaffold_391 StringTie exon 244457 244523 1000 - . gene_id "MSTRG.80125"; transcript_id "MSTRG.80125.1"; exon_number "3"; scaffold_391 StringTie exon 326048 326797 1000 . . gene_id "MSTRG.80137"; transcript_id "MSTRG.80137.1"; exon_number "1"; scaffold_391 StringTie exon 812058 812564 1000 . . gene_id "MSTRG.80168"; transcript_id "MSTRG.80168.1"; exon_number "1"; scaffold_391 StringTie exon 813534 813817 1000 . . gene_id "MSTRG.80169"; transcript_id "MSTRG.80169.1"; exon_number "1"; scaffold_391 StringTie exon 853699 853960 1000 . . gene_id "MSTRG.80172"; transcript_id "MSTRG.80172.1"; exon_number "1"; scaffold_3914 StringTie exon 22017 22067 1000 + . gene_id "MSTRG.80212"; transcript_id "MSTRG.80212.2"; exon_number "1"; scaffold_3914 StringTie exon 22819 22917 1000 + . gene_id "MSTRG.80212"; transcript_id "MSTRG.80212.2"; exon_number "2"; scaffold_3914 StringTie exon 23621 23728 1000 + . gene_id "MSTRG.80212"; transcript_id "MSTRG.80212.2"; exon_number "3"; scaffold_3914 StringTie exon 23912 23972 1000 + . gene_id "MSTRG.80212"; transcript_id "MSTRG.80212.2"; exon_number "4"; scaffold_3914 StringTie exon 24202 24365 1000 + . gene_id "MSTRG.80212"; transcript_id "MSTRG.80212.2"; exon_number "5"; scaffold_3914 StringTie exon 26168 26436 1000 . . gene_id "MSTRG.80214"; transcript_id "MSTRG.80214.1"; exon_number "1"; scaffold_3914 StringTie exon 41118 41827 1000 . . gene_id "MSTRG.80217"; transcript_id "MSTRG.80217.1"; exon_number "1"; scaffold_3915 StringTie exon 39670 39920 1000 . . gene_id "MSTRG.80221"; transcript_id "MSTRG.80221.1"; exon_number "1"; scaffold_392 StringTie exon 103551 104091 1000 . . gene_id "MSTRG.80263"; transcript_id "MSTRG.80263.1"; exon_number "1"; scaffold_392 StringTie exon 312351 312877 1000 . . gene_id "MSTRG.80282"; transcript_id "MSTRG.80282.1"; exon_number "1"; scaffold_392 StringTie exon 560836 561085 1000 . . gene_id "MSTRG.80296"; transcript_id "MSTRG.80296.1"; exon_number "1"; scaffold_3923 StringTie exon 435 931 1000 . . gene_id "MSTRG.80330"; transcript_id "MSTRG.80330.1"; exon_number "1"; scaffold_3924 StringTie exon 35425 35524 1000 + . gene_id "MSTRG.80344"; transcript_id "MSTRG.80344.1"; exon_number "1"; scaffold_3924 StringTie exon 39327 39433 1000 + . gene_id "MSTRG.80344"; transcript_id "MSTRG.80344.1"; exon_number "2"; scaffold_3924 StringTie exon 42871 42980 1000 + . gene_id "MSTRG.80345"; transcript_id "MSTRG.80345.1"; exon_number "1"; scaffold_3924 StringTie exon 43058 43143 1000 + . gene_id "MSTRG.80345"; transcript_id "MSTRG.80345.1"; exon_number "2"; scaffold_3924 StringTie exon 45106 45256 1000 + . gene_id "MSTRG.80345"; transcript_id "MSTRG.80345.1"; exon_number "3"; scaffold_39250 StringTie exon 2961 3262 1000 . . gene_id "MSTRG.80357"; transcript_id "MSTRG.80357.1"; exon_number "1"; scaffold_393 StringTie exon 55447 56315 1000 . . gene_id "MSTRG.80396"; transcript_id "MSTRG.80396.1"; exon_number "1"; scaffold_393 StringTie exon 113594 114423 1000 . . gene_id "MSTRG.80401"; transcript_id "MSTRG.80401.1"; exon_number "1"; scaffold_393 StringTie exon 296535 296754 1000 . . gene_id "MSTRG.80420"; transcript_id "MSTRG.80420.1"; exon_number "1"; scaffold_393 StringTie exon 351232 351708 1000 . . gene_id "MSTRG.80425"; transcript_id "MSTRG.80425.1"; exon_number "1"; scaffold_393 StringTie exon 419832 420063 1000 . . gene_id "MSTRG.80429"; transcript_id "MSTRG.80429.1"; exon_number "1"; scaffold_393 StringTie exon 658273 661441 1000 . . gene_id "MSTRG.80459"; transcript_id "MSTRG.80459.1"; exon_number "1"; scaffold_393 StringTie exon 759489 759744 1000 . . gene_id "MSTRG.80469"; transcript_id "MSTRG.80469.1"; exon_number "1"; scaffold_39322 StringTie exon 2295 2633 1000 . . gene_id "MSTRG.80497"; transcript_id "MSTRG.80497.1"; exon_number "1"; scaffold_3935 StringTie exon 22482 22618 1000 + . gene_id "MSTRG.80519"; transcript_id "MSTRG.80519.1"; exon_number "1"; scaffold_3935 StringTie exon 22898 23027 1000 + . gene_id "MSTRG.80519"; transcript_id "MSTRG.80519.1"; exon_number "2"; scaffold_3935 StringTie exon 23324 23423 1000 + . gene_id "MSTRG.80519"; transcript_id "MSTRG.80519.1"; exon_number "3"; scaffold_3935 StringTie exon 24287 24393 1000 + . gene_id "MSTRG.80519"; transcript_id "MSTRG.80519.1"; exon_number "4"; scaffold_3935 StringTie exon 24723 24933 1000 + . gene_id "MSTRG.80519"; transcript_id "MSTRG.80519.1"; exon_number "5"; scaffold_39350 StringTie exon 1782 2116 1000 . . gene_id "MSTRG.80525"; transcript_id "MSTRG.80525.1"; exon_number "1"; scaffold_394 StringTie exon 13822 13890 1000 + . gene_id "MSTRG.80562"; transcript_id "MSTRG.80562.3"; exon_number "1"; scaffold_394 StringTie exon 19729 19805 1000 + . gene_id "MSTRG.80562"; transcript_id "MSTRG.80562.3"; exon_number "2"; scaffold_394 StringTie exon 20161 20325 1000 + . gene_id "MSTRG.80562"; transcript_id "MSTRG.80562.3"; exon_number "3"; scaffold_394 StringTie exon 23681 23812 1000 + . gene_id "MSTRG.80562"; transcript_id "MSTRG.80562.3"; exon_number "4"; scaffold_394 StringTie exon 25004 25317 1000 + . gene_id "MSTRG.80562"; transcript_id "MSTRG.80562.3"; exon_number "5"; scaffold_394 StringTie exon 59886 60172 1000 . . gene_id "MSTRG.80567"; transcript_id "MSTRG.80567.1"; exon_number "1"; scaffold_394 StringTie exon 340826 341101 1000 . . gene_id "MSTRG.80581"; transcript_id "MSTRG.80581.1"; exon_number "1"; scaffold_394 StringTie exon 368538 368855 1000 . . gene_id "MSTRG.80582"; transcript_id "MSTRG.80582.1"; exon_number "1"; scaffold_394 StringTie exon 752387 752623 1000 . . gene_id "MSTRG.80619"; transcript_id "MSTRG.80619.1"; exon_number "1"; scaffold_394 StringTie exon 784345 784632 1000 . . gene_id "MSTRG.80620"; transcript_id "MSTRG.80620.1"; exon_number "1"; scaffold_3942 StringTie exon 13150 13364 1000 . . gene_id "MSTRG.80637"; transcript_id "MSTRG.80637.1"; exon_number "1"; scaffold_3946 StringTie exon 3085 4314 1000 . . gene_id "MSTRG.80656"; transcript_id "MSTRG.80656.1"; exon_number "1"; scaffold_39478 StringTie exon 2990 3339 1000 . . gene_id "MSTRG.80681"; transcript_id "MSTRG.80681.1"; exon_number "1"; scaffold_395 StringTie exon 575959 576178 1000 . . gene_id "MSTRG.80716"; transcript_id "MSTRG.80716.1"; exon_number "1"; scaffold_395 StringTie exon 651487 651658 1000 + . gene_id "MSTRG.80727"; transcript_id "MSTRG.80727.1"; exon_number "1"; scaffold_395 StringTie exon 654118 654196 1000 + . gene_id "MSTRG.80727"; transcript_id "MSTRG.80727.1"; exon_number "2"; scaffold_395 StringTie exon 744276 744432 1000 - . gene_id "MSTRG.80737"; transcript_id "MSTRG.80737.1"; exon_number "1"; scaffold_395 StringTie exon 744974 745224 1000 - . gene_id "MSTRG.80737"; transcript_id "MSTRG.80737.1"; exon_number "2"; scaffold_3950 StringTie exon 53683 53940 1000 . . gene_id "MSTRG.80754"; transcript_id "MSTRG.80754.1"; exon_number "1"; scaffold_3951 StringTie exon 35742 37748 1000 . . gene_id "MSTRG.80761"; transcript_id "MSTRG.80761.1"; exon_number "1"; scaffold_3952 StringTie exon 44584 44794 1000 . . gene_id "MSTRG.80769"; transcript_id "MSTRG.80769.1"; exon_number "1"; scaffold_39536 StringTie exon 116 393 1000 . . gene_id "MSTRG.80792"; transcript_id "MSTRG.80792.1"; exon_number "1"; scaffold_3954 StringTie exon 55048 55301 1000 . . gene_id "MSTRG.80798"; transcript_id "MSTRG.80798.1"; exon_number "1"; scaffold_39567 StringTie exon 1610 1939 1000 . . gene_id "MSTRG.80815"; transcript_id "MSTRG.80815.1"; exon_number "1"; scaffold_396 StringTie exon 481511 482258 1000 - . gene_id "MSTRG.80877"; transcript_id "MSTRG.80877.1"; exon_number "1"; scaffold_396 StringTie exon 482416 482474 1000 - . gene_id "MSTRG.80877"; transcript_id "MSTRG.80877.1"; exon_number "2"; scaffold_396 StringTie exon 484103 484149 1000 - . gene_id "MSTRG.80877"; transcript_id "MSTRG.80877.1"; exon_number "3"; scaffold_396 StringTie exon 484806 484875 1000 - . gene_id "MSTRG.80877"; transcript_id "MSTRG.80877.1"; exon_number "4"; scaffold_396 StringTie exon 485303 485441 1000 - . gene_id "MSTRG.80877"; transcript_id "MSTRG.80877.1"; exon_number "5"; scaffold_396 StringTie exon 485575 485782 1000 - . gene_id "MSTRG.80877"; transcript_id "MSTRG.80877.1"; exon_number "6"; scaffold_396 StringTie exon 491247 491356 1000 - . gene_id "MSTRG.80877"; transcript_id "MSTRG.80877.1"; exon_number "7"; scaffold_396 StringTie exon 577123 577365 1000 . . gene_id "MSTRG.80883"; transcript_id "MSTRG.80883.1"; exon_number "1"; scaffold_396 StringTie exon 818011 818447 1000 . . gene_id "MSTRG.80901"; transcript_id "MSTRG.80901.1"; exon_number "1"; scaffold_39604 StringTie exon 475 733 1000 . . gene_id "MSTRG.80922"; transcript_id "MSTRG.80922.1"; exon_number "1"; scaffold_3964 StringTie exon 46108 46701 1000 . . gene_id "MSTRG.80943"; transcript_id "MSTRG.80943.1"; exon_number "1"; scaffold_39645 StringTie exon 60 600 1000 - . gene_id "MSTRG.80947"; transcript_id "MSTRG.80947.1"; exon_number "1"; scaffold_39645 StringTie exon 1205 1327 1000 - . gene_id "MSTRG.80947"; transcript_id "MSTRG.80947.1"; exon_number "2"; scaffold_39645 StringTie exon 1616 1674 1000 - . gene_id "MSTRG.80947"; transcript_id "MSTRG.80947.1"; exon_number "3"; scaffold_39645 StringTie exon 2065 2160 1000 - . gene_id "MSTRG.80947"; transcript_id "MSTRG.80947.1"; exon_number "4"; scaffold_39645 StringTie exon 2957 3050 1000 - . gene_id "MSTRG.80947"; transcript_id "MSTRG.80947.1"; exon_number "5"; scaffold_39645 StringTie exon 3166 3224 1000 - . gene_id "MSTRG.80947"; transcript_id "MSTRG.80947.1"; exon_number "6"; scaffold_3967 StringTie exon 14743 15109 1000 . . gene_id "MSTRG.80971"; transcript_id "MSTRG.80971.1"; exon_number "1"; scaffold_3967 StringTie exon 55097 55280 1000 - . gene_id "MSTRG.80978"; transcript_id "MSTRG.80978.1"; exon_number "1"; scaffold_3967 StringTie exon 55362 55461 1000 - . gene_id "MSTRG.80978"; transcript_id "MSTRG.80978.1"; exon_number "2"; scaffold_39673 StringTie exon 2449 2673 1000 . . gene_id "MSTRG.80980"; transcript_id "MSTRG.80980.1"; exon_number "1"; scaffold_3968 StringTie exon 6023 6086 1000 + . gene_id "MSTRG.80987"; transcript_id "MSTRG.80987.1"; exon_number "1"; scaffold_3968 StringTie exon 12025 12191 1000 + . gene_id "MSTRG.80987"; transcript_id "MSTRG.80987.1"; exon_number "2"; scaffold_3968 StringTie exon 12531 12652 1000 + . gene_id "MSTRG.80987"; transcript_id "MSTRG.80987.1"; exon_number "3"; scaffold_3969 StringTie exon 39767 40051 1000 . . gene_id "MSTRG.80998"; transcript_id "MSTRG.80998.1"; exon_number "1"; scaffold_397 StringTie exon 111089 111372 1000 - . gene_id "MSTRG.81014"; transcript_id "MSTRG.81014.1"; exon_number "1"; scaffold_397 StringTie exon 111470 111677 1000 - . gene_id "MSTRG.81014"; transcript_id "MSTRG.81014.1"; exon_number "2"; scaffold_397 StringTie exon 111776 111809 1000 - . gene_id "MSTRG.81014"; transcript_id "MSTRG.81014.1"; exon_number "3"; scaffold_397 StringTie exon 231973 232286 1000 . . gene_id "MSTRG.81033"; transcript_id "MSTRG.81033.1"; exon_number "1"; scaffold_397 StringTie exon 240862 241176 1000 . . gene_id "MSTRG.81036"; transcript_id "MSTRG.81036.1"; exon_number "1"; scaffold_397 StringTie exon 529004 529479 1000 . . gene_id "MSTRG.81060"; transcript_id "MSTRG.81060.1"; exon_number "1"; scaffold_397 StringTie exon 605076 605112 1000 + . gene_id "MSTRG.81073"; transcript_id "MSTRG.81073.1"; exon_number "1"; scaffold_397 StringTie exon 605213 605296 1000 + . gene_id "MSTRG.81073"; transcript_id "MSTRG.81073.1"; exon_number "2"; scaffold_397 StringTie exon 605369 605518 1000 + . gene_id "MSTRG.81073"; transcript_id "MSTRG.81073.1"; exon_number "3"; scaffold_397 StringTie exon 605641 605829 1000 + . gene_id "MSTRG.81073"; transcript_id "MSTRG.81073.1"; exon_number "4"; scaffold_397 StringTie exon 609094 609279 1000 + . gene_id "MSTRG.81073"; transcript_id "MSTRG.81073.1"; exon_number "5"; scaffold_397 StringTie exon 609422 609577 1000 + . gene_id "MSTRG.81073"; transcript_id "MSTRG.81073.1"; exon_number "6"; scaffold_397 StringTie exon 639430 639587 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.3"; exon_number "1"; scaffold_397 StringTie exon 639826 639876 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.3"; exon_number "2"; scaffold_397 StringTie exon 640040 640141 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.3"; exon_number "3"; scaffold_397 StringTie exon 640371 640506 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.3"; exon_number "4"; scaffold_397 StringTie exon 643447 643548 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.3"; exon_number "5"; scaffold_397 StringTie exon 643897 644293 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.3"; exon_number "6"; scaffold_397 StringTie exon 639430 639587 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.4"; exon_number "1"; scaffold_397 StringTie exon 640040 640117 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.4"; exon_number "2"; scaffold_397 StringTie exon 640371 640506 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.4"; exon_number "3"; scaffold_397 StringTie exon 643447 643548 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.4"; exon_number "4"; scaffold_397 StringTie exon 643897 644293 1000 + . gene_id "MSTRG.81079"; transcript_id "MSTRG.81079.4"; exon_number "5"; scaffold_3972 StringTie exon 28392 28627 1000 . . gene_id "MSTRG.81113"; transcript_id "MSTRG.81113.1"; exon_number "1"; scaffold_3973 StringTie exon 28309 31509 1000 . . gene_id "MSTRG.81116"; transcript_id "MSTRG.81116.1"; exon_number "1"; scaffold_39750 StringTie exon 1149 1362 1000 . . gene_id "MSTRG.81132"; transcript_id "MSTRG.81132.1"; exon_number "1"; scaffold_39752 StringTie exon 794 1382 1000 . . gene_id "MSTRG.81133"; transcript_id "MSTRG.81133.1"; exon_number "1"; scaffold_3979 StringTie exon 15354 15734 1000 . . gene_id "MSTRG.81161"; transcript_id "MSTRG.81161.1"; exon_number "1"; scaffold_398 StringTie exon 20949 22008 1000 - . gene_id "MSTRG.81170"; transcript_id "MSTRG.81170.1"; exon_number "1"; scaffold_398 StringTie exon 263670 263957 1000 - . gene_id "MSTRG.81194"; transcript_id "MSTRG.81194.1"; exon_number "1"; scaffold_398 StringTie exon 265277 265303 1000 - . gene_id "MSTRG.81194"; transcript_id "MSTRG.81194.1"; exon_number "2"; scaffold_3980 StringTie exon 5685 5933 1000 - . gene_id "MSTRG.81229"; transcript_id "MSTRG.81229.1"; exon_number "1"; scaffold_3980 StringTie exon 10824 10889 1000 - . gene_id "MSTRG.81229"; transcript_id "MSTRG.81229.1"; exon_number "2"; scaffold_3980 StringTie exon 12838 12947 1000 - . gene_id "MSTRG.81229"; transcript_id "MSTRG.81229.1"; exon_number "3"; scaffold_3980 StringTie exon 13081 13215 1000 - . gene_id "MSTRG.81229"; transcript_id "MSTRG.81229.1"; exon_number "4"; scaffold_39822 StringTie exon 2264 2565 1000 . . gene_id "MSTRG.81254"; transcript_id "MSTRG.81254.1"; exon_number "1"; scaffold_3985 StringTie exon 25 200 1000 + . gene_id "MSTRG.81272"; transcript_id "MSTRG.81272.1"; exon_number "1"; scaffold_3985 StringTie exon 265 316 1000 + . gene_id "MSTRG.81272"; transcript_id "MSTRG.81272.1"; exon_number "2"; scaffold_3985 StringTie exon 3798 4019 1000 . . gene_id "MSTRG.81273"; transcript_id "MSTRG.81273.1"; exon_number "1"; scaffold_3985 StringTie exon 45586 46224 1000 . . gene_id "MSTRG.81283"; transcript_id "MSTRG.81283.1"; exon_number "1"; scaffold_39871 StringTie exon 2193 2245 1000 - . gene_id "MSTRG.81297"; transcript_id "MSTRG.81297.1"; exon_number "1"; scaffold_39871 StringTie exon 2465 3031 1000 - . gene_id "MSTRG.81297"; transcript_id "MSTRG.81297.1"; exon_number "2"; scaffold_39879 StringTie exon 2111 2316 1000 . . gene_id "MSTRG.81299"; transcript_id "MSTRG.81299.1"; exon_number "1"; scaffold_3989 StringTie exon 33125 33386 1000 . . gene_id "MSTRG.81306"; transcript_id "MSTRG.81306.1"; exon_number "1"; scaffold_399 StringTie exon 55311 55529 1000 . . gene_id "MSTRG.81311"; transcript_id "MSTRG.81311.1"; exon_number "1"; scaffold_399 StringTie exon 354626 354939 1000 + . gene_id "MSTRG.81327"; transcript_id "MSTRG.81327.1"; exon_number "1"; scaffold_399 StringTie exon 356473 356548 1000 + . gene_id "MSTRG.81327"; transcript_id "MSTRG.81327.1"; exon_number "2"; scaffold_399 StringTie exon 556698 557093 1000 . . gene_id "MSTRG.81343"; transcript_id "MSTRG.81343.1"; exon_number "1"; scaffold_399 StringTie exon 739737 739839 1000 + . gene_id "MSTRG.81358"; transcript_id "MSTRG.81358.1"; exon_number "1"; scaffold_399 StringTie exon 740788 740924 1000 + . gene_id "MSTRG.81358"; transcript_id "MSTRG.81358.1"; exon_number "2"; scaffold_3990 StringTie exon 38509 38723 1000 + . gene_id "MSTRG.81366"; transcript_id "MSTRG.81366.2"; exon_number "1"; scaffold_3990 StringTie exon 38883 39209 1000 + . gene_id "MSTRG.81366"; transcript_id "MSTRG.81366.2"; exon_number "2"; scaffold_3992 StringTie exon 32639 32970 1000 - . gene_id "MSTRG.81373"; transcript_id "MSTRG.81373.1"; exon_number "1"; scaffold_39948 StringTie exon 620 841 1000 + . gene_id "MSTRG.81397"; transcript_id "MSTRG.81397.1"; exon_number "1"; scaffold_3995 StringTie exon 25592 25839 1000 . . gene_id "MSTRG.81398"; transcript_id "MSTRG.81398.1"; exon_number "1"; scaffold_39951 StringTie exon 1562 1868 1000 . . gene_id "MSTRG.81401"; transcript_id "MSTRG.81401.1"; exon_number "1"; scaffold_39986 StringTie exon 2011 2407 1000 . . gene_id "MSTRG.81417"; transcript_id "MSTRG.81417.1"; exon_number "1"; scaffold_39989 StringTie exon 1776 1983 1000 . . gene_id "MSTRG.81418"; transcript_id "MSTRG.81418.1"; exon_number "1"; scaffold_4 StringTie exon 151708 151732 1000 - . gene_id "MSTRG.81439"; transcript_id "MSTRG.81439.1"; exon_number "1"; scaffold_4 StringTie exon 151967 152095 1000 - . gene_id "MSTRG.81439"; transcript_id "MSTRG.81439.1"; exon_number "2"; scaffold_4 StringTie exon 165962 166129 1000 - . gene_id "MSTRG.81439"; transcript_id "MSTRG.81439.1"; exon_number "3"; scaffold_4 StringTie exon 325522 325745 1000 . . gene_id "MSTRG.81452"; transcript_id "MSTRG.81452.1"; exon_number "1"; scaffold_4 StringTie exon 458178 458445 1000 . . gene_id "MSTRG.81459"; transcript_id "MSTRG.81459.1"; exon_number "1"; scaffold_4 StringTie exon 876517 876766 1000 . . gene_id "MSTRG.81480"; transcript_id "MSTRG.81480.1"; exon_number "1"; scaffold_4 StringTie exon 1240582 1240807 1000 . . gene_id "MSTRG.81506"; transcript_id "MSTRG.81506.1"; exon_number "1"; scaffold_4 StringTie exon 1280124 1280408 1000 . . gene_id "MSTRG.81511"; transcript_id "MSTRG.81511.1"; exon_number "1"; scaffold_4 StringTie exon 2062969 2064024 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "1"; scaffold_4 StringTie exon 2069288 2069398 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "2"; scaffold_4 StringTie exon 2069789 2069906 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "3"; scaffold_4 StringTie exon 2070145 2070317 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "4"; scaffold_4 StringTie exon 2070640 2070764 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "5"; scaffold_4 StringTie exon 2070870 2071062 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "6"; scaffold_4 StringTie exon 2071565 2071659 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "7"; scaffold_4 StringTie exon 2071781 2071931 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "8"; scaffold_4 StringTie exon 2072196 2072347 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "9"; scaffold_4 StringTie exon 2072421 2072556 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "10"; scaffold_4 StringTie exon 2073653 2073773 1000 - . gene_id "MSTRG.81556"; transcript_id "MSTRG.81556.1"; exon_number "11"; scaffold_4 StringTie exon 2151617 2151924 1000 . . gene_id "MSTRG.81562"; transcript_id "MSTRG.81562.1"; exon_number "1"; scaffold_4 StringTie exon 2301262 2301638 1000 . . gene_id "MSTRG.81572"; transcript_id "MSTRG.81572.1"; exon_number "1"; scaffold_4 StringTie exon 2316268 2316475 1000 . . gene_id "MSTRG.81576"; transcript_id "MSTRG.81576.1"; exon_number "1"; scaffold_4 StringTie exon 2601894 2602160 1000 . . gene_id "MSTRG.81588"; transcript_id "MSTRG.81588.1"; exon_number "1"; scaffold_4 StringTie exon 2903742 2904837 1000 . . gene_id "MSTRG.81607"; transcript_id "MSTRG.81607.1"; exon_number "1"; scaffold_4 StringTie exon 3077246 3077543 1000 . . gene_id "MSTRG.81616"; transcript_id "MSTRG.81616.1"; exon_number "1"; scaffold_4 StringTie exon 3139939 3140774 1000 . . gene_id "MSTRG.81624"; transcript_id "MSTRG.81624.1"; exon_number "1"; scaffold_4 StringTie exon 3149676 3150106 1000 - . gene_id "MSTRG.81627"; transcript_id "MSTRG.81627.1"; exon_number "1"; scaffold_4 StringTie exon 3154588 3154776 1000 - . gene_id "MSTRG.81627"; transcript_id "MSTRG.81627.1"; exon_number "2"; scaffold_4 StringTie exon 3155064 3155185 1000 - . gene_id "MSTRG.81627"; transcript_id "MSTRG.81627.1"; exon_number "3"; scaffold_4 StringTie exon 3192002 3192216 1000 - . gene_id "MSTRG.81632"; transcript_id "MSTRG.81632.1"; exon_number "1"; scaffold_4 StringTie exon 3192467 3192676 1000 - . gene_id "MSTRG.81632"; transcript_id "MSTRG.81632.1"; exon_number "2"; scaffold_4 StringTie exon 3192843 3193253 1000 - . gene_id "MSTRG.81632"; transcript_id "MSTRG.81632.1"; exon_number "3"; scaffold_4 StringTie exon 3194211 3194569 1000 - . gene_id "MSTRG.81632"; transcript_id "MSTRG.81632.1"; exon_number "4"; scaffold_4 StringTie exon 3231314 3231446 1000 + . gene_id "MSTRG.81635"; transcript_id "MSTRG.81635.1"; exon_number "1"; scaffold_4 StringTie exon 3232889 3233030 1000 + . gene_id "MSTRG.81635"; transcript_id "MSTRG.81635.1"; exon_number "2"; scaffold_4 StringTie exon 3233530 3233593 1000 + . gene_id "MSTRG.81635"; transcript_id "MSTRG.81635.1"; exon_number "3"; scaffold_4 StringTie exon 3233924 3234021 1000 + . gene_id "MSTRG.81635"; transcript_id "MSTRG.81635.1"; exon_number "4"; scaffold_4 StringTie exon 3237400 3237582 1000 + . gene_id "MSTRG.81635"; transcript_id "MSTRG.81635.1"; exon_number "5"; scaffold_4 StringTie exon 3238000 3238074 1000 + . gene_id "MSTRG.81635"; transcript_id "MSTRG.81635.1"; exon_number "6"; scaffold_4 StringTie exon 3238288 3238415 1000 + . gene_id "MSTRG.81635"; transcript_id "MSTRG.81635.1"; exon_number "7"; scaffold_4 StringTie exon 3328447 3328678 1000 . . gene_id "MSTRG.81649"; transcript_id "MSTRG.81649.1"; exon_number "1"; scaffold_4 StringTie exon 3648395 3648694 1000 . . gene_id "MSTRG.81674"; transcript_id "MSTRG.81674.1"; exon_number "1"; scaffold_4 StringTie exon 3760170 3760268 1000 + . gene_id "MSTRG.81678"; transcript_id "MSTRG.81678.1"; exon_number "1"; scaffold_4 StringTie exon 3761810 3762618 1000 + . gene_id "MSTRG.81678"; transcript_id "MSTRG.81678.1"; exon_number "2"; scaffold_4 StringTie exon 3762770 3762900 1000 + . gene_id "MSTRG.81678"; transcript_id "MSTRG.81678.1"; exon_number "3"; scaffold_4 StringTie exon 3763113 3763164 1000 + . gene_id "MSTRG.81678"; transcript_id "MSTRG.81678.1"; exon_number "4"; scaffold_4 StringTie exon 3832217 3833006 1000 - . gene_id "MSTRG.81687"; transcript_id "MSTRG.81687.1"; exon_number "1"; scaffold_4 StringTie exon 3833381 3833440 1000 - . gene_id "MSTRG.81687"; transcript_id "MSTRG.81687.1"; exon_number "2"; scaffold_40 StringTie exon 235595 236133 1000 . . gene_id "MSTRG.81716"; transcript_id "MSTRG.81716.1"; exon_number "1"; scaffold_40 StringTie exon 265412 266495 1000 . . gene_id "MSTRG.81719"; transcript_id "MSTRG.81719.1"; exon_number "1"; scaffold_40 StringTie exon 792555 793470 1000 . . gene_id "MSTRG.81748"; transcript_id "MSTRG.81748.1"; exon_number "1"; scaffold_40 StringTie exon 819624 819950 1000 . . gene_id "MSTRG.81749"; transcript_id "MSTRG.81749.1"; exon_number "1"; scaffold_40 StringTie exon 1223886 1224757 1000 . . gene_id "MSTRG.81776"; transcript_id "MSTRG.81776.1"; exon_number "1"; scaffold_40 StringTie exon 1768816 1769030 1000 . . gene_id "MSTRG.81806"; transcript_id "MSTRG.81806.1"; exon_number "1"; scaffold_40 StringTie exon 1954007 1954198 1000 + . gene_id "MSTRG.81813"; transcript_id "MSTRG.81813.1"; exon_number "1"; scaffold_40 StringTie exon 2015301 2015321 1000 + . gene_id "MSTRG.81813"; transcript_id "MSTRG.81813.1"; exon_number "2"; scaffold_40 StringTie exon 2222271 2222729 1000 . . gene_id "MSTRG.81821"; transcript_id "MSTRG.81821.1"; exon_number "1"; scaffold_40 StringTie exon 2259221 2259443 1000 . . gene_id "MSTRG.81829"; transcript_id "MSTRG.81829.1"; exon_number "1"; scaffold_400 StringTie exon 462824 463068 1000 . . gene_id "MSTRG.81840"; transcript_id "MSTRG.81840.1"; exon_number "1"; scaffold_400 StringTie exon 595136 595350 1000 . . gene_id "MSTRG.81846"; transcript_id "MSTRG.81846.1"; exon_number "1"; scaffold_4003 StringTie exon 25273 25671 1000 . . gene_id "MSTRG.81890"; transcript_id "MSTRG.81890.1"; exon_number "1"; scaffold_40076 StringTie exon 225 1058 1000 . . gene_id "MSTRG.81917"; transcript_id "MSTRG.81917.1"; exon_number "1"; scaffold_4008 StringTie exon 11440 11564 1000 + . gene_id "MSTRG.81924"; transcript_id "MSTRG.81924.1"; exon_number "1"; scaffold_4008 StringTie exon 11688 11905 1000 + . gene_id "MSTRG.81924"; transcript_id "MSTRG.81924.1"; exon_number "2"; scaffold_4008 StringTie exon 12162 12237 1000 + . gene_id "MSTRG.81924"; transcript_id "MSTRG.81924.1"; exon_number "3"; scaffold_4009 StringTie exon 33919 34058 1000 - . gene_id "MSTRG.81946"; transcript_id "MSTRG.81946.1"; exon_number "1"; scaffold_4009 StringTie exon 34223 34349 1000 - . gene_id "MSTRG.81946"; transcript_id "MSTRG.81946.1"; exon_number "2"; scaffold_4009 StringTie exon 34560 34601 1000 - . gene_id "MSTRG.81946"; transcript_id "MSTRG.81946.1"; exon_number "3"; scaffold_4009 StringTie exon 34900 34967 1000 - . gene_id "MSTRG.81946"; transcript_id "MSTRG.81946.1"; exon_number "4"; scaffold_4009 StringTie exon 35100 35212 1000 - . gene_id "MSTRG.81946"; transcript_id "MSTRG.81946.1"; exon_number "5"; scaffold_4009 StringTie exon 35324 35409 1000 - . gene_id "MSTRG.81946"; transcript_id "MSTRG.81946.1"; exon_number "6"; scaffold_4009 StringTie exon 35516 35700 1000 - . gene_id "MSTRG.81946"; transcript_id "MSTRG.81946.1"; exon_number "7"; scaffold_4009 StringTie exon 36183 36248 1000 + . gene_id "MSTRG.81947"; transcript_id "MSTRG.81947.1"; exon_number "1"; scaffold_4009 StringTie exon 36647 36828 1000 + . gene_id "MSTRG.81947"; transcript_id "MSTRG.81947.1"; exon_number "2"; scaffold_4009 StringTie exon 37053 37209 1000 + . gene_id "MSTRG.81947"; transcript_id "MSTRG.81947.1"; exon_number "3"; scaffold_4009 StringTie exon 38003 38202 1000 + . gene_id "MSTRG.81947"; transcript_id "MSTRG.81947.1"; exon_number "4"; scaffold_4009 StringTie exon 38603 38828 1000 + . gene_id "MSTRG.81947"; transcript_id "MSTRG.81947.1"; exon_number "5"; scaffold_4009 StringTie exon 40745 41110 1000 + . gene_id "MSTRG.81947"; transcript_id "MSTRG.81947.1"; exon_number "6"; scaffold_40095 StringTie exon 2655 2942 1000 . . gene_id "MSTRG.81949"; transcript_id "MSTRG.81949.1"; exon_number "1"; scaffold_401 StringTie exon 10638 10915 1000 . . gene_id "MSTRG.81950"; transcript_id "MSTRG.81950.1"; exon_number "1"; scaffold_401 StringTie exon 345457 345708 1000 . . gene_id "MSTRG.81967"; transcript_id "MSTRG.81967.1"; exon_number "1"; scaffold_4011 StringTie exon 19878 20159 1000 . . gene_id "MSTRG.82015"; transcript_id "MSTRG.82015.1"; exon_number "1"; scaffold_40114 StringTie exon 2767 2985 1000 . . gene_id "MSTRG.82023"; transcript_id "MSTRG.82023.1"; exon_number "1"; scaffold_40134 StringTie exon 1 394 1000 . . gene_id "MSTRG.82043"; transcript_id "MSTRG.82043.1"; exon_number "1"; scaffold_40140 StringTie exon 2487 2709 1000 . . gene_id "MSTRG.82055"; transcript_id "MSTRG.82055.1"; exon_number "1"; scaffold_4015 StringTie exon 20430 20722 1000 - . gene_id "MSTRG.82063"; transcript_id "MSTRG.82063.1"; exon_number "1"; scaffold_4015 StringTie exon 36320 36345 1000 - . gene_id "MSTRG.82063"; transcript_id "MSTRG.82063.1"; exon_number "2"; scaffold_40155 StringTie exon 2207 2386 1000 - . gene_id "MSTRG.82068"; transcript_id "MSTRG.82068.1"; exon_number "1"; scaffold_40155 StringTie exon 2937 3034 1000 - . gene_id "MSTRG.82068"; transcript_id "MSTRG.82068.1"; exon_number "2"; scaffold_40155 StringTie exon 3124 3232 1000 - . gene_id "MSTRG.82068"; transcript_id "MSTRG.82068.1"; exon_number "3"; scaffold_4017 StringTie exon 43043 43279 1000 . . gene_id "MSTRG.82082"; transcript_id "MSTRG.82082.1"; exon_number "1"; scaffold_4018 StringTie exon 48463 48790 1000 . . gene_id "MSTRG.82090"; transcript_id "MSTRG.82090.1"; exon_number "1"; scaffold_402 StringTie exon 75956 76106 1000 + . gene_id "MSTRG.82109"; transcript_id "MSTRG.82109.1"; exon_number "1"; scaffold_402 StringTie exon 76417 76449 1000 + . gene_id "MSTRG.82109"; transcript_id "MSTRG.82109.1"; exon_number "2"; scaffold_402 StringTie exon 77904 78015 1000 + . gene_id "MSTRG.82109"; transcript_id "MSTRG.82109.1"; exon_number "3"; scaffold_402 StringTie exon 78147 78289 1000 + . gene_id "MSTRG.82109"; transcript_id "MSTRG.82109.1"; exon_number "4"; scaffold_402 StringTie exon 236860 237607 1000 . . gene_id "MSTRG.82123"; transcript_id "MSTRG.82123.1"; exon_number "1"; scaffold_402 StringTie exon 436298 436863 1000 . . gene_id "MSTRG.82132"; transcript_id "MSTRG.82132.1"; exon_number "1"; scaffold_402 StringTie exon 462108 462328 1000 . . gene_id "MSTRG.82135"; transcript_id "MSTRG.82135.1"; exon_number "1"; scaffold_403 StringTie exon 219720 220009 1000 + . gene_id "MSTRG.82218"; transcript_id "MSTRG.82218.1"; exon_number "1"; scaffold_403 StringTie exon 223585 223729 1000 + . gene_id "MSTRG.82218"; transcript_id "MSTRG.82218.1"; exon_number "2"; scaffold_403 StringTie exon 224073 224151 1000 + . gene_id "MSTRG.82218"; transcript_id "MSTRG.82218.1"; exon_number "3"; scaffold_403 StringTie exon 224405 224464 1000 + . gene_id "MSTRG.82218"; transcript_id "MSTRG.82218.1"; exon_number "4"; scaffold_403 StringTie exon 224917 225057 1000 + . gene_id "MSTRG.82218"; transcript_id "MSTRG.82218.1"; exon_number "5"; scaffold_403 StringTie exon 427733 427818 1000 + . gene_id "MSTRG.82238"; transcript_id "MSTRG.82238.1"; exon_number "1"; scaffold_403 StringTie exon 430874 431104 1000 + . gene_id "MSTRG.82238"; transcript_id "MSTRG.82238.1"; exon_number "2"; scaffold_403 StringTie exon 536863 537124 1000 . . gene_id "MSTRG.82251"; transcript_id "MSTRG.82251.1"; exon_number "1"; scaffold_403 StringTie exon 646551 646816 1000 . . gene_id "MSTRG.82267"; transcript_id "MSTRG.82267.1"; exon_number "1"; scaffold_403 StringTie exon 831426 831483 1000 - . gene_id "MSTRG.82285"; transcript_id "MSTRG.82285.1"; exon_number "1"; scaffold_403 StringTie exon 831592 831680 1000 - . gene_id "MSTRG.82285"; transcript_id "MSTRG.82285.1"; exon_number "2"; scaffold_403 StringTie exon 831764 831845 1000 - . gene_id "MSTRG.82285"; transcript_id "MSTRG.82285.1"; exon_number "3"; scaffold_403 StringTie exon 847616 848576 1000 - . gene_id "MSTRG.82288"; transcript_id "MSTRG.82288.1"; exon_number "1"; scaffold_403 StringTie exon 848913 849020 1000 - . gene_id "MSTRG.82288"; transcript_id "MSTRG.82288.1"; exon_number "2"; scaffold_403 StringTie exon 849140 849175 1000 - . gene_id "MSTRG.82288"; transcript_id "MSTRG.82288.1"; exon_number "3"; scaffold_403 StringTie exon 849273 849302 1000 - . gene_id "MSTRG.82288"; transcript_id "MSTRG.82288.1"; exon_number "4"; scaffold_403 StringTie exon 849494 849520 1000 - . gene_id "MSTRG.82288"; transcript_id "MSTRG.82288.1"; exon_number "5"; scaffold_403 StringTie exon 851101 851230 1000 - . gene_id "MSTRG.82288"; transcript_id "MSTRG.82288.1"; exon_number "6"; scaffold_4031 StringTie exon 15569 16514 1000 . . gene_id "MSTRG.82297"; transcript_id "MSTRG.82297.1"; exon_number "1"; scaffold_4031 StringTie exon 21302 21326 1000 - . gene_id "MSTRG.82300"; transcript_id "MSTRG.82300.1"; exon_number "1"; scaffold_4031 StringTie exon 21588 21694 1000 - . gene_id "MSTRG.82300"; transcript_id "MSTRG.82300.1"; exon_number "2"; scaffold_4031 StringTie exon 22225 22295 1000 - . gene_id "MSTRG.82300"; transcript_id "MSTRG.82300.1"; exon_number "3"; scaffold_4037 StringTie exon 42383 42929 1000 . . gene_id "MSTRG.82340"; transcript_id "MSTRG.82340.1"; exon_number "1"; scaffold_4038 StringTie exon 31524 31755 1000 + . gene_id "MSTRG.82351"; transcript_id "MSTRG.82351.1"; exon_number "1"; scaffold_404 StringTie exon 144248 144618 1000 . . gene_id "MSTRG.82377"; transcript_id "MSTRG.82377.1"; exon_number "1"; scaffold_404 StringTie exon 347129 347721 1000 . . gene_id "MSTRG.82393"; transcript_id "MSTRG.82393.1"; exon_number "1"; scaffold_404 StringTie exon 350895 351014 1000 - . gene_id "MSTRG.82397"; transcript_id "MSTRG.82397.1"; exon_number "1"; scaffold_404 StringTie exon 351421 351529 1000 - . gene_id "MSTRG.82397"; transcript_id "MSTRG.82397.1"; exon_number "2"; scaffold_4043 StringTie exon 18232 18617 1000 . . gene_id "MSTRG.82466"; transcript_id "MSTRG.82466.1"; exon_number "1"; scaffold_40437 StringTie exon 1604 2036 1000 . . gene_id "MSTRG.82470"; transcript_id "MSTRG.82470.1"; exon_number "1"; scaffold_405 StringTie exon 270383 270657 1000 + . gene_id "MSTRG.82535"; transcript_id "MSTRG.82535.1"; exon_number "1"; scaffold_405 StringTie exon 598374 598595 1000 . . gene_id "MSTRG.82551"; transcript_id "MSTRG.82551.1"; exon_number "1"; scaffold_4051 StringTie exon 53959 54192 1000 . . gene_id "MSTRG.82576"; transcript_id "MSTRG.82576.1"; exon_number "1"; scaffold_4052 StringTie exon 54498 55103 1000 . . gene_id "MSTRG.82590"; transcript_id "MSTRG.82590.1"; exon_number "1"; scaffold_40540 StringTie exon 2123 2355 1000 . . gene_id "MSTRG.82609"; transcript_id "MSTRG.82609.1"; exon_number "1"; scaffold_4055 StringTie exon 10244 10474 1000 . . gene_id "MSTRG.82613"; transcript_id "MSTRG.82613.1"; exon_number "1"; scaffold_4055 StringTie exon 35177 35469 1000 . . gene_id "MSTRG.82615"; transcript_id "MSTRG.82615.1"; exon_number "1"; scaffold_4057 StringTie exon 37946 38201 1000 . . gene_id "MSTRG.82630"; transcript_id "MSTRG.82630.1"; exon_number "1"; scaffold_4057 StringTie exon 54720 55321 1000 + . gene_id "MSTRG.82635"; transcript_id "MSTRG.82635.1"; exon_number "1"; scaffold_4058 StringTie exon 123 669 1000 . . gene_id "MSTRG.82638"; transcript_id "MSTRG.82638.1"; exon_number "1"; scaffold_4059 StringTie exon 50844 51113 1000 . . gene_id "MSTRG.82661"; transcript_id "MSTRG.82661.1"; exon_number "1"; scaffold_406 StringTie exon 227828 228071 1000 . . gene_id "MSTRG.82679"; transcript_id "MSTRG.82679.1"; exon_number "1"; scaffold_406 StringTie exon 234154 235367 1000 . . gene_id "MSTRG.82682"; transcript_id "MSTRG.82682.1"; exon_number "1"; scaffold_406 StringTie exon 239737 240060 1000 . . gene_id "MSTRG.82686"; transcript_id "MSTRG.82686.1"; exon_number "1"; scaffold_406 StringTie exon 263435 265055 1000 + . gene_id "MSTRG.82688"; transcript_id "MSTRG.82688.1"; exon_number "1"; scaffold_406 StringTie exon 303402 303654 1000 . . gene_id "MSTRG.82690"; transcript_id "MSTRG.82690.1"; exon_number "1"; scaffold_406 StringTie exon 345277 345573 1000 . . gene_id "MSTRG.82693"; transcript_id "MSTRG.82693.1"; exon_number "1"; scaffold_406 StringTie exon 372838 372994 1000 - . gene_id "MSTRG.82697"; transcript_id "MSTRG.82697.1"; exon_number "1"; scaffold_406 StringTie exon 373330 373428 1000 - . gene_id "MSTRG.82697"; transcript_id "MSTRG.82697.1"; exon_number "2"; scaffold_406 StringTie exon 498138 498195 1000 + . gene_id "MSTRG.82711"; transcript_id "MSTRG.82711.1"; exon_number "1"; scaffold_406 StringTie exon 498837 498963 1000 + . gene_id "MSTRG.82711"; transcript_id "MSTRG.82711.1"; exon_number "2"; scaffold_406 StringTie exon 499318 499393 1000 + . gene_id "MSTRG.82711"; transcript_id "MSTRG.82711.1"; exon_number "3"; scaffold_406 StringTie exon 499573 499754 1000 + . gene_id "MSTRG.82711"; transcript_id "MSTRG.82711.1"; exon_number "4"; scaffold_406 StringTie exon 499993 500008 1000 + . gene_id "MSTRG.82711"; transcript_id "MSTRG.82711.1"; exon_number "5"; scaffold_406 StringTie exon 627068 627378 1000 . . gene_id "MSTRG.82728"; transcript_id "MSTRG.82728.1"; exon_number "1"; scaffold_4065 StringTie exon 49063 49325 1000 . . gene_id "MSTRG.82782"; transcript_id "MSTRG.82782.1"; exon_number "1"; scaffold_40652 StringTie exon 2419 2756 1000 . . gene_id "MSTRG.82783"; transcript_id "MSTRG.82783.1"; exon_number "1"; scaffold_40683 StringTie exon 142 389 1000 . . gene_id "MSTRG.82809"; transcript_id "MSTRG.82809.1"; exon_number "1"; scaffold_40698 StringTie exon 2844 3171 1000 + . gene_id "MSTRG.82818"; transcript_id "MSTRG.82818.1"; exon_number "1"; scaffold_40698 StringTie exon 3230 3239 1000 + . gene_id "MSTRG.82818"; transcript_id "MSTRG.82818.1"; exon_number "2"; scaffold_407 StringTie exon 8808 9073 1000 . . gene_id "MSTRG.82819"; transcript_id "MSTRG.82819.1"; exon_number "1"; scaffold_407 StringTie exon 127205 127286 1000 + . gene_id "MSTRG.82830"; transcript_id "MSTRG.82830.1"; exon_number "1"; scaffold_407 StringTie exon 130389 130561 1000 + . gene_id "MSTRG.82830"; transcript_id "MSTRG.82830.1"; exon_number "2"; scaffold_407 StringTie exon 194320 194448 1000 + . gene_id "MSTRG.82837"; transcript_id "MSTRG.82837.1"; exon_number "1"; scaffold_407 StringTie exon 195826 195931 1000 + . gene_id "MSTRG.82837"; transcript_id "MSTRG.82837.1"; exon_number "2"; scaffold_407 StringTie exon 196104 196192 1000 + . gene_id "MSTRG.82837"; transcript_id "MSTRG.82837.1"; exon_number "3"; scaffold_407 StringTie exon 302651 302684 1000 + . gene_id "MSTRG.82846"; transcript_id "MSTRG.82846.1"; exon_number "1"; scaffold_407 StringTie exon 302830 302917 1000 + . gene_id "MSTRG.82846"; transcript_id "MSTRG.82846.1"; exon_number "2"; scaffold_407 StringTie exon 303777 304082 1000 + . gene_id "MSTRG.82846"; transcript_id "MSTRG.82846.1"; exon_number "3"; scaffold_407 StringTie exon 486046 486299 1000 . . gene_id "MSTRG.82863"; transcript_id "MSTRG.82863.1"; exon_number "1"; scaffold_407 StringTie exon 581009 581368 1000 . . gene_id "MSTRG.82872"; transcript_id "MSTRG.82872.1"; exon_number "1"; scaffold_407 StringTie exon 716959 717347 1000 - . gene_id "MSTRG.82884"; transcript_id "MSTRG.82884.1"; exon_number "1"; scaffold_407 StringTie exon 717677 717815 1000 - . gene_id "MSTRG.82884"; transcript_id "MSTRG.82884.1"; exon_number "2"; scaffold_407 StringTie exon 717973 717988 1000 - . gene_id "MSTRG.82884"; transcript_id "MSTRG.82884.1"; exon_number "3"; scaffold_407 StringTie exon 723875 724032 1000 - . gene_id "MSTRG.82887"; transcript_id "MSTRG.82887.1"; exon_number "1"; scaffold_407 StringTie exon 724139 724196 1000 - . gene_id "MSTRG.82887"; transcript_id "MSTRG.82887.1"; exon_number "2"; scaffold_4074 StringTie exon 29920 30395 1000 . . gene_id "MSTRG.82917"; transcript_id "MSTRG.82917.1"; exon_number "1"; scaffold_4074 StringTie exon 32069 33114 1000 . . gene_id "MSTRG.82918"; transcript_id "MSTRG.82918.1"; exon_number "1"; scaffold_4077 StringTie exon 45730 45972 1000 . . gene_id "MSTRG.82937"; transcript_id "MSTRG.82937.1"; exon_number "1"; scaffold_4079 StringTie exon 6153 6390 1000 . . gene_id "MSTRG.82960"; transcript_id "MSTRG.82960.1"; exon_number "1"; scaffold_408 StringTie exon 203903 204186 1000 . . gene_id "MSTRG.82976"; transcript_id "MSTRG.82976.1"; exon_number "1"; scaffold_408 StringTie exon 211598 212069 1000 . . gene_id "MSTRG.82979"; transcript_id "MSTRG.82979.1"; exon_number "1"; scaffold_408 StringTie exon 228684 228920 1000 . . gene_id "MSTRG.82980"; transcript_id "MSTRG.82980.1"; exon_number "1"; scaffold_408 StringTie exon 312539 312765 1000 . . gene_id "MSTRG.82984"; transcript_id "MSTRG.82984.1"; exon_number "1"; scaffold_408 StringTie exon 808918 808935 1000 + . gene_id "MSTRG.83025"; transcript_id "MSTRG.83025.1"; exon_number "1"; scaffold_408 StringTie exon 817366 817581 1000 + . gene_id "MSTRG.83025"; transcript_id "MSTRG.83025.1"; exon_number "2"; scaffold_4080 StringTie exon 37033 38410 1000 . . gene_id "MSTRG.83039"; transcript_id "MSTRG.83039.1"; exon_number "1"; scaffold_4080 StringTie exon 38990 39327 1000 . . gene_id "MSTRG.83040"; transcript_id "MSTRG.83040.1"; exon_number "1"; scaffold_40810 StringTie exon 2498 2733 1000 . . gene_id "MSTRG.83054"; transcript_id "MSTRG.83054.1"; exon_number "1"; scaffold_40831 StringTie exon 1231 1412 1000 - . gene_id "MSTRG.83077"; transcript_id "MSTRG.83077.2"; exon_number "1"; scaffold_40831 StringTie exon 2064 2152 1000 - . gene_id "MSTRG.83077"; transcript_id "MSTRG.83077.2"; exon_number "2"; scaffold_4084 StringTie exon 53357 53709 1000 . . gene_id "MSTRG.83081"; transcript_id "MSTRG.83081.1"; exon_number "1"; scaffold_4086 StringTie exon 3359 3643 1000 . . gene_id "MSTRG.83090"; transcript_id "MSTRG.83090.1"; exon_number "1"; scaffold_40882 StringTie exon 5 330 1000 . . gene_id "MSTRG.83106"; transcript_id "MSTRG.83106.1"; exon_number "1"; scaffold_409 StringTie exon 136884 137124 1000 . . gene_id "MSTRG.83127"; transcript_id "MSTRG.83127.1"; exon_number "1"; scaffold_409 StringTie exon 153004 153314 1000 . . gene_id "MSTRG.83128"; transcript_id "MSTRG.83128.1"; exon_number "1"; scaffold_409 StringTie exon 189815 190040 1000 . . gene_id "MSTRG.83132"; transcript_id "MSTRG.83132.1"; exon_number "1"; scaffold_40943 StringTie exon 464 829 1000 + . gene_id "MSTRG.83203"; transcript_id "MSTRG.83203.1"; exon_number "1"; scaffold_40964 StringTie exon 226 3261 1000 . . gene_id "MSTRG.83217"; transcript_id "MSTRG.83217.1"; exon_number "1"; scaffold_4098 StringTie exon 4534 4745 1000 . . gene_id "MSTRG.83231"; transcript_id "MSTRG.83231.1"; exon_number "1"; scaffold_41 StringTie exon 115322 115545 1000 . . gene_id "MSTRG.83248"; transcript_id "MSTRG.83248.1"; exon_number "1"; scaffold_41 StringTie exon 409314 409362 1000 - . gene_id "MSTRG.83266"; transcript_id "MSTRG.83266.1"; exon_number "1"; scaffold_41 StringTie exon 442460 442767 1000 - . gene_id "MSTRG.83266"; transcript_id "MSTRG.83266.1"; exon_number "2"; scaffold_41 StringTie exon 571811 571975 1000 + . gene_id "MSTRG.83275"; transcript_id "MSTRG.83275.1"; exon_number "1"; scaffold_41 StringTie exon 572379 572466 1000 + . gene_id "MSTRG.83275"; transcript_id "MSTRG.83275.1"; exon_number "2"; scaffold_41 StringTie exon 576116 576185 1000 + . gene_id "MSTRG.83275"; transcript_id "MSTRG.83275.1"; exon_number "3"; scaffold_41 StringTie exon 577961 578039 1000 + . gene_id "MSTRG.83275"; transcript_id "MSTRG.83275.1"; exon_number "4"; scaffold_41 StringTie exon 578220 578370 1000 + . gene_id "MSTRG.83275"; transcript_id "MSTRG.83275.1"; exon_number "5"; scaffold_41 StringTie exon 578620 578810 1000 + . gene_id "MSTRG.83275"; transcript_id "MSTRG.83275.1"; exon_number "6"; scaffold_41 StringTie exon 737809 738159 1000 . . gene_id "MSTRG.83292"; transcript_id "MSTRG.83292.1"; exon_number "1"; scaffold_41 StringTie exon 927507 927938 1000 + . gene_id "MSTRG.83300"; transcript_id "MSTRG.83300.2"; exon_number "1"; scaffold_41 StringTie exon 935102 935179 1000 + . gene_id "MSTRG.83300"; transcript_id "MSTRG.83300.2"; exon_number "2"; scaffold_41 StringTie exon 935326 935364 1000 + . gene_id "MSTRG.83300"; transcript_id "MSTRG.83300.2"; exon_number "3"; scaffold_41 StringTie exon 935640 935702 1000 + . gene_id "MSTRG.83300"; transcript_id "MSTRG.83300.2"; exon_number "4"; scaffold_41 StringTie exon 936219 936369 1000 + . gene_id "MSTRG.83300"; transcript_id "MSTRG.83300.2"; exon_number "5"; scaffold_41 StringTie exon 937134 937282 1000 + . gene_id "MSTRG.83300"; transcript_id "MSTRG.83300.2"; exon_number "6"; scaffold_41 StringTie exon 940466 940538 1000 + . gene_id "MSTRG.83300"; transcript_id "MSTRG.83300.2"; exon_number "7"; scaffold_41 StringTie exon 940917 941851 1000 + . gene_id "MSTRG.83300"; transcript_id "MSTRG.83300.2"; exon_number "8"; scaffold_41 StringTie exon 1030369 1030575 1000 . . gene_id "MSTRG.83303"; transcript_id "MSTRG.83303.1"; exon_number "1"; scaffold_41 StringTie exon 1093307 1093612 1000 . . gene_id "MSTRG.83306"; transcript_id "MSTRG.83306.1"; exon_number "1"; scaffold_41 StringTie exon 1130849 1131101 1000 . . gene_id "MSTRG.83314"; transcript_id "MSTRG.83314.1"; exon_number "1"; scaffold_41 StringTie exon 1190979 1191602 1000 . . gene_id "MSTRG.83325"; transcript_id "MSTRG.83325.1"; exon_number "1"; scaffold_41 StringTie exon 1274411 1274453 1000 - . gene_id "MSTRG.83344"; transcript_id "MSTRG.83344.1"; exon_number "1"; scaffold_41 StringTie exon 1277175 1277356 1000 - . gene_id "MSTRG.83344"; transcript_id "MSTRG.83344.1"; exon_number "2"; scaffold_41 StringTie exon 1363588 1363860 1000 . . gene_id "MSTRG.83349"; transcript_id "MSTRG.83349.1"; exon_number "1"; scaffold_41 StringTie exon 1808686 1808899 1000 . . gene_id "MSTRG.83378"; transcript_id "MSTRG.83378.1"; exon_number "1"; scaffold_410 StringTie exon 233182 233449 1000 . . gene_id "MSTRG.83413"; transcript_id "MSTRG.83413.1"; exon_number "1"; scaffold_410 StringTie exon 355129 355158 1000 - . gene_id "MSTRG.83424"; transcript_id "MSTRG.83424.1"; exon_number "1"; scaffold_410 StringTie exon 355429 355573 1000 - . gene_id "MSTRG.83424"; transcript_id "MSTRG.83424.1"; exon_number "2"; scaffold_410 StringTie exon 355823 355966 1000 - . gene_id "MSTRG.83424"; transcript_id "MSTRG.83424.1"; exon_number "3"; scaffold_410 StringTie exon 356092 356186 1000 - . gene_id "MSTRG.83424"; transcript_id "MSTRG.83424.1"; exon_number "4"; scaffold_410 StringTie exon 378044 378329 1000 . . gene_id "MSTRG.83425"; transcript_id "MSTRG.83425.1"; exon_number "1"; scaffold_410 StringTie exon 578336 578542 1000 . . gene_id "MSTRG.83454"; transcript_id "MSTRG.83454.1"; exon_number "1"; scaffold_4101 StringTie exon 36615 36879 1000 . . gene_id "MSTRG.83478"; transcript_id "MSTRG.83478.1"; exon_number "1"; scaffold_4102 StringTie exon 50803 51313 1000 . . gene_id "MSTRG.83487"; transcript_id "MSTRG.83487.1"; exon_number "1"; scaffold_41020 StringTie exon 2618 2854 1000 . . gene_id "MSTRG.83489"; transcript_id "MSTRG.83489.1"; exon_number "1"; scaffold_41035 StringTie exon 432 654 1000 . . gene_id "MSTRG.83495"; transcript_id "MSTRG.83495.1"; exon_number "1"; scaffold_411 StringTie exon 133638 133910 1000 . . gene_id "MSTRG.83554"; transcript_id "MSTRG.83554.1"; exon_number "1"; scaffold_411 StringTie exon 203041 203314 1000 . . gene_id "MSTRG.83560"; transcript_id "MSTRG.83560.1"; exon_number "1"; scaffold_411 StringTie exon 459155 459606 1000 - . gene_id "MSTRG.83570"; transcript_id "MSTRG.83570.1"; exon_number "1"; scaffold_411 StringTie exon 459876 460011 1000 - . gene_id "MSTRG.83570"; transcript_id "MSTRG.83570.1"; exon_number "2"; scaffold_411 StringTie exon 461066 461290 1000 - . gene_id "MSTRG.83570"; transcript_id "MSTRG.83570.1"; exon_number "3"; scaffold_411 StringTie exon 736833 736927 1000 + . gene_id "MSTRG.83590"; transcript_id "MSTRG.83590.1"; exon_number "1"; scaffold_411 StringTie exon 739967 740370 1000 + . gene_id "MSTRG.83590"; transcript_id "MSTRG.83590.1"; exon_number "2"; scaffold_411 StringTie exon 737842 737989 1000 + . gene_id "MSTRG.83590"; transcript_id "MSTRG.83590.2"; exon_number "1"; scaffold_411 StringTie exon 739967 740221 1000 + . gene_id "MSTRG.83590"; transcript_id "MSTRG.83590.2"; exon_number "2"; scaffold_411 StringTie exon 766616 766670 1000 + . gene_id "MSTRG.83592"; transcript_id "MSTRG.83592.1"; exon_number "1"; scaffold_411 StringTie exon 766844 767041 1000 + . gene_id "MSTRG.83592"; transcript_id "MSTRG.83592.1"; exon_number "2"; scaffold_411 StringTie exon 767352 767400 1000 + . gene_id "MSTRG.83592"; transcript_id "MSTRG.83592.1"; exon_number "3"; scaffold_4113 StringTie exon 7319 7546 1000 . . gene_id "MSTRG.83607"; transcript_id "MSTRG.83607.1"; exon_number "1"; scaffold_4118 StringTie exon 2633 3243 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "1"; scaffold_4118 StringTie exon 4956 5191 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "2"; scaffold_4118 StringTie exon 5954 6114 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "3"; scaffold_4118 StringTie exon 7255 7589 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "4"; scaffold_4118 StringTie exon 7825 7986 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "5"; scaffold_4118 StringTie exon 8155 8259 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "6"; scaffold_4118 StringTie exon 11007 11087 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "7"; scaffold_4118 StringTie exon 11240 11384 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "8"; scaffold_4118 StringTie exon 11844 11950 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "9"; scaffold_4118 StringTie exon 16523 16741 1000 - . gene_id "MSTRG.83648"; transcript_id "MSTRG.83648.3"; exon_number "10"; scaffold_41192 StringTie exon 2155 2405 1000 . . gene_id "MSTRG.83662"; transcript_id "MSTRG.83662.1"; exon_number "1"; scaffold_412 StringTie exon 137609 137963 1000 - . gene_id "MSTRG.83675"; transcript_id "MSTRG.83675.1"; exon_number "1"; scaffold_412 StringTie exon 485592 486347 1000 - . gene_id "MSTRG.83707"; transcript_id "MSTRG.83707.1"; exon_number "1"; scaffold_412 StringTie exon 486377 486543 1000 - . gene_id "MSTRG.83707"; transcript_id "MSTRG.83707.1"; exon_number "2"; scaffold_412 StringTie exon 538258 538300 1000 + . gene_id "MSTRG.83711"; transcript_id "MSTRG.83711.2"; exon_number "1"; scaffold_412 StringTie exon 538778 538883 1000 + . gene_id "MSTRG.83711"; transcript_id "MSTRG.83711.2"; exon_number "2"; scaffold_412 StringTie exon 539090 539144 1000 + . gene_id "MSTRG.83711"; transcript_id "MSTRG.83711.2"; exon_number "3"; scaffold_412 StringTie exon 545258 545478 1000 . . gene_id "MSTRG.83714"; transcript_id "MSTRG.83714.1"; exon_number "1"; scaffold_41235 StringTie exon 1628 1887 1000 . . gene_id "MSTRG.83753"; transcript_id "MSTRG.83753.1"; exon_number "1"; scaffold_41243 StringTie exon 101 164 1000 + . gene_id "MSTRG.83758"; transcript_id "MSTRG.83758.1"; exon_number "1"; scaffold_41243 StringTie exon 313 475 1000 + . gene_id "MSTRG.83758"; transcript_id "MSTRG.83758.1"; exon_number "2"; scaffold_41243 StringTie exon 624 718 1000 + . gene_id "MSTRG.83758"; transcript_id "MSTRG.83758.1"; exon_number "3"; scaffold_41243 StringTie exon 1025 1808 1000 + . gene_id "MSTRG.83758"; transcript_id "MSTRG.83758.1"; exon_number "4"; scaffold_4125 StringTie exon 39445 39685 1000 . . gene_id "MSTRG.83765"; transcript_id "MSTRG.83765.1"; exon_number "1"; scaffold_4126 StringTie exon 8988 9230 1000 . . gene_id "MSTRG.83771"; transcript_id "MSTRG.83771.1"; exon_number "1"; scaffold_41299 StringTie exon 2100 2550 1000 . . gene_id "MSTRG.83793"; transcript_id "MSTRG.83793.1"; exon_number "1"; scaffold_413 StringTie exon 608844 609122 1000 . . gene_id "MSTRG.83816"; transcript_id "MSTRG.83816.1"; exon_number "1"; scaffold_413 StringTie exon 791980 792322 1000 . . gene_id "MSTRG.83829"; transcript_id "MSTRG.83829.1"; exon_number "1"; scaffold_41328 StringTie exon 975 1176 1000 . . gene_id "MSTRG.83850"; transcript_id "MSTRG.83850.1"; exon_number "1"; scaffold_41344 StringTie exon 1092 1415 1000 . . gene_id "MSTRG.83870"; transcript_id "MSTRG.83870.1"; exon_number "1"; scaffold_41345 StringTie exon 64 724 1000 . . gene_id "MSTRG.83871"; transcript_id "MSTRG.83871.1"; exon_number "1"; scaffold_41345 StringTie exon 1744 3237 1000 . . gene_id "MSTRG.83872"; transcript_id "MSTRG.83872.1"; exon_number "1"; scaffold_41349 StringTie exon 530 1055 1000 . . gene_id "MSTRG.83874"; transcript_id "MSTRG.83874.1"; exon_number "1"; scaffold_41386 StringTie exon 366 615 1000 . . gene_id "MSTRG.83900"; transcript_id "MSTRG.83900.1"; exon_number "1"; scaffold_414 StringTie exon 333270 333475 1000 . . gene_id "MSTRG.83922"; transcript_id "MSTRG.83922.1"; exon_number "1"; scaffold_414 StringTie exon 372688 372913 1000 + . gene_id "MSTRG.83924"; transcript_id "MSTRG.83924.1"; exon_number "1"; scaffold_414 StringTie exon 373211 373266 1000 + . gene_id "MSTRG.83924"; transcript_id "MSTRG.83924.1"; exon_number "2"; scaffold_414 StringTie exon 373853 373922 1000 + . gene_id "MSTRG.83924"; transcript_id "MSTRG.83924.1"; exon_number "3"; scaffold_414 StringTie exon 374169 374334 1000 + . gene_id "MSTRG.83924"; transcript_id "MSTRG.83924.1"; exon_number "4"; scaffold_414 StringTie exon 374588 374684 1000 + . gene_id "MSTRG.83924"; transcript_id "MSTRG.83924.1"; exon_number "5"; scaffold_414 StringTie exon 433846 434102 1000 . . gene_id "MSTRG.83927"; transcript_id "MSTRG.83927.1"; exon_number "1"; scaffold_414 StringTie exon 473301 473524 1000 . . gene_id "MSTRG.83928"; transcript_id "MSTRG.83928.1"; exon_number "1"; scaffold_414 StringTie exon 591796 592018 1000 . . gene_id "MSTRG.83935"; transcript_id "MSTRG.83935.1"; exon_number "1"; scaffold_414 StringTie exon 700040 700768 1000 - . gene_id "MSTRG.83945"; transcript_id "MSTRG.83945.1"; exon_number "1"; scaffold_414 StringTie exon 703341 703350 1000 - . gene_id "MSTRG.83945"; transcript_id "MSTRG.83945.1"; exon_number "2"; scaffold_414 StringTie exon 733707 733936 1000 . . gene_id "MSTRG.83950"; transcript_id "MSTRG.83950.1"; exon_number "1"; scaffold_4140 StringTie exon 50079 50553 1000 . . gene_id "MSTRG.83960"; transcript_id "MSTRG.83960.1"; exon_number "1"; scaffold_4141 StringTie exon 32818 33053 1000 . . gene_id "MSTRG.83967"; transcript_id "MSTRG.83967.1"; exon_number "1"; scaffold_41416 StringTie exon 2635 2836 1000 . . gene_id "MSTRG.83968"; transcript_id "MSTRG.83968.1"; exon_number "1"; scaffold_4142 StringTie exon 19712 19976 1000 - . gene_id "MSTRG.83969"; transcript_id "MSTRG.83969.1"; exon_number "1"; scaffold_41421 StringTie exon 72 431 1000 . . gene_id "MSTRG.83971"; transcript_id "MSTRG.83971.1"; exon_number "1"; scaffold_41477 StringTie exon 2832 3167 1000 . . gene_id "MSTRG.84018"; transcript_id "MSTRG.84018.1"; exon_number "1"; scaffold_415 StringTie exon 111144 111200 1000 + . gene_id "MSTRG.84043"; transcript_id "MSTRG.84043.1"; exon_number "1"; scaffold_415 StringTie exon 111433 111562 1000 + . gene_id "MSTRG.84043"; transcript_id "MSTRG.84043.1"; exon_number "2"; scaffold_415 StringTie exon 111677 111748 1000 + . gene_id "MSTRG.84043"; transcript_id "MSTRG.84043.1"; exon_number "3"; scaffold_415 StringTie exon 812002 812429 1000 . . gene_id "MSTRG.84100"; transcript_id "MSTRG.84100.1"; exon_number "1"; scaffold_4153 StringTie exon 24388 24616 1000 . . gene_id "MSTRG.84119"; transcript_id "MSTRG.84119.1"; exon_number "1"; scaffold_4153 StringTie exon 49239 49511 1000 . . gene_id "MSTRG.84123"; transcript_id "MSTRG.84123.1"; exon_number "1"; scaffold_41539 StringTie exon 4 257 1000 . . gene_id "MSTRG.84128"; transcript_id "MSTRG.84128.1"; exon_number "1"; scaffold_4154 StringTie exon 1791 2011 1000 . . gene_id "MSTRG.84130"; transcript_id "MSTRG.84130.1"; exon_number "1"; scaffold_41542 StringTie exon 2286 2694 1000 . . gene_id "MSTRG.84137"; transcript_id "MSTRG.84137.1"; exon_number "1"; scaffold_4159 StringTie exon 4224 4572 1000 - . gene_id "MSTRG.84173"; transcript_id "MSTRG.84173.1"; exon_number "1"; scaffold_416 StringTie exon 278784 278939 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.2"; exon_number "1"; scaffold_416 StringTie exon 279586 279668 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.2"; exon_number "2"; scaffold_416 StringTie exon 286846 286980 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.2"; exon_number "3"; scaffold_416 StringTie exon 291366 291744 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.2"; exon_number "4"; scaffold_416 StringTie exon 291840 291869 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.2"; exon_number "5"; scaffold_416 StringTie exon 292867 292940 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.2"; exon_number "6"; scaffold_416 StringTie exon 293381 293577 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.2"; exon_number "7"; scaffold_416 StringTie exon 286849 286980 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.3"; exon_number "1"; scaffold_416 StringTie exon 291366 291744 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.3"; exon_number "2"; scaffold_416 StringTie exon 292867 292940 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.3"; exon_number "3"; scaffold_416 StringTie exon 293381 293559 1000 + . gene_id "MSTRG.84192"; transcript_id "MSTRG.84192.3"; exon_number "4"; scaffold_416 StringTie exon 393721 393989 1000 . . gene_id "MSTRG.84204"; transcript_id "MSTRG.84204.1"; exon_number "1"; scaffold_416 StringTie exon 468561 468847 1000 . . gene_id "MSTRG.84214"; transcript_id "MSTRG.84214.1"; exon_number "1"; scaffold_416 StringTie exon 670817 671034 1000 . . gene_id "MSTRG.84228"; transcript_id "MSTRG.84228.1"; exon_number "1"; scaffold_416 StringTie exon 749531 749753 1000 . . gene_id "MSTRG.84236"; transcript_id "MSTRG.84236.1"; exon_number "1"; scaffold_4160 StringTie exon 3449 3690 1000 . . gene_id "MSTRG.84240"; transcript_id "MSTRG.84240.1"; exon_number "1"; scaffold_4161 StringTie exon 18970 19169 1000 . . gene_id "MSTRG.84253"; transcript_id "MSTRG.84253.1"; exon_number "1"; scaffold_4165 StringTie exon 26344 26576 1000 . . gene_id "MSTRG.84280"; transcript_id "MSTRG.84280.1"; exon_number "1"; scaffold_4165 StringTie exon 30729 30987 1000 . . gene_id "MSTRG.84281"; transcript_id "MSTRG.84281.1"; exon_number "1"; scaffold_41655 StringTie exon 1571 1911 1000 . . gene_id "MSTRG.84285"; transcript_id "MSTRG.84285.1"; exon_number "1"; scaffold_4168 StringTie exon 43015 43372 1000 . . gene_id "MSTRG.84306"; transcript_id "MSTRG.84306.1"; exon_number "1"; scaffold_41691 StringTie exon 1317 1573 1000 . . gene_id "MSTRG.84318"; transcript_id "MSTRG.84318.1"; exon_number "1"; scaffold_417 StringTie exon 337251 337556 1000 . . gene_id "MSTRG.84337"; transcript_id "MSTRG.84337.1"; exon_number "1"; scaffold_417 StringTie exon 504207 504541 1000 . . gene_id "MSTRG.84342"; transcript_id "MSTRG.84342.1"; exon_number "1"; scaffold_417 StringTie exon 615863 616098 1000 . . gene_id "MSTRG.84347"; transcript_id "MSTRG.84347.1"; exon_number "1"; scaffold_4176 StringTie exon 6855 7001 1000 - . gene_id "MSTRG.84392"; transcript_id "MSTRG.84392.1"; exon_number "1"; scaffold_4176 StringTie exon 7101 7163 1000 - . gene_id "MSTRG.84392"; transcript_id "MSTRG.84392.1"; exon_number "2"; scaffold_4176 StringTie exon 7318 7455 1000 - . gene_id "MSTRG.84392"; transcript_id "MSTRG.84392.1"; exon_number "3"; scaffold_4176 StringTie exon 8156 8181 1000 - . gene_id "MSTRG.84392"; transcript_id "MSTRG.84392.1"; exon_number "4"; scaffold_41780 StringTie exon 2923 3164 1000 . . gene_id "MSTRG.84408"; transcript_id "MSTRG.84408.1"; exon_number "1"; scaffold_41785 StringTie exon 1107 1474 1000 . . gene_id "MSTRG.84410"; transcript_id "MSTRG.84410.1"; exon_number "1"; scaffold_4179 StringTie exon 35671 36029 1000 . . gene_id "MSTRG.84417"; transcript_id "MSTRG.84417.1"; exon_number "1"; scaffold_4181 StringTie exon 41915 42205 1000 . . gene_id "MSTRG.84463"; transcript_id "MSTRG.84463.1"; exon_number "1"; scaffold_41855 StringTie exon 1697 1950 1000 . . gene_id "MSTRG.84488"; transcript_id "MSTRG.84488.1"; exon_number "1"; scaffold_4186 StringTie exon 53006 53536 1000 - . gene_id "MSTRG.84498"; transcript_id "MSTRG.84498.1"; exon_number "1"; scaffold_4186 StringTie exon 53828 54063 1000 - . gene_id "MSTRG.84498"; transcript_id "MSTRG.84498.1"; exon_number "2"; scaffold_4189 StringTie exon 31539 32371 1000 . . gene_id "MSTRG.84511"; transcript_id "MSTRG.84511.1"; exon_number "1"; scaffold_419 StringTie exon 57495 57708 1000 . . gene_id "MSTRG.84517"; transcript_id "MSTRG.84517.1"; exon_number "1"; scaffold_419 StringTie exon 227072 227315 1000 . . gene_id "MSTRG.84528"; transcript_id "MSTRG.84528.1"; exon_number "1"; scaffold_419 StringTie exon 762195 762495 1000 . . gene_id "MSTRG.84554"; transcript_id "MSTRG.84554.1"; exon_number "1"; scaffold_419 StringTie exon 813622 813854 1000 . . gene_id "MSTRG.84558"; transcript_id "MSTRG.84558.1"; exon_number "1"; scaffold_4190 StringTie exon 34631 34850 1000 . . gene_id "MSTRG.84562"; transcript_id "MSTRG.84562.1"; exon_number "1"; scaffold_4190 StringTie exon 46161 46884 1000 . . gene_id "MSTRG.84565"; transcript_id "MSTRG.84565.1"; exon_number "1"; scaffold_4192 StringTie exon 2664 3056 1000 + . gene_id "MSTRG.84572"; transcript_id "MSTRG.84572.1"; exon_number "1"; scaffold_4192 StringTie exon 50417 50547 1000 + . gene_id "MSTRG.84572"; transcript_id "MSTRG.84572.1"; exon_number "2"; scaffold_41941 StringTie exon 210 411 1000 . . gene_id "MSTRG.84586"; transcript_id "MSTRG.84586.1"; exon_number "1"; scaffold_4195 StringTie exon 35857 36140 1000 . . gene_id "MSTRG.84594"; transcript_id "MSTRG.84594.1"; exon_number "1"; scaffold_41960 StringTie exon 2902 3200 1000 . . gene_id "MSTRG.84604"; transcript_id "MSTRG.84604.1"; exon_number "1"; scaffold_4197 StringTie exon 26048 26265 1000 . . gene_id "MSTRG.84612"; transcript_id "MSTRG.84612.1"; exon_number "1"; scaffold_4198 StringTie exon 2547 2819 1000 . . gene_id "MSTRG.84622"; transcript_id "MSTRG.84622.1"; exon_number "1"; scaffold_42 StringTie exon 563816 564095 1000 . . gene_id "MSTRG.84681"; transcript_id "MSTRG.84681.1"; exon_number "1"; scaffold_42 StringTie exon 587244 587638 1000 - . gene_id "MSTRG.84683"; transcript_id "MSTRG.84683.1"; exon_number "1"; scaffold_42 StringTie exon 595538 595983 1000 - . gene_id "MSTRG.84683"; transcript_id "MSTRG.84683.1"; exon_number "2"; scaffold_42 StringTie exon 751987 752234 1000 . . gene_id "MSTRG.84697"; transcript_id "MSTRG.84697.1"; exon_number "1"; scaffold_42 StringTie exon 856562 856840 1000 . . gene_id "MSTRG.84706"; transcript_id "MSTRG.84706.1"; exon_number "1"; scaffold_42 StringTie exon 1305414 1305646 1000 - . gene_id "MSTRG.84735"; transcript_id "MSTRG.84735.1"; exon_number "1"; scaffold_42 StringTie exon 1308364 1308427 1000 - . gene_id "MSTRG.84735"; transcript_id "MSTRG.84735.1"; exon_number "2"; scaffold_42 StringTie exon 1308968 1309312 1000 - . gene_id "MSTRG.84735"; transcript_id "MSTRG.84735.1"; exon_number "3"; scaffold_42 StringTie exon 1404533 1404635 1000 - . gene_id "MSTRG.84739"; transcript_id "MSTRG.84739.1"; exon_number "1"; scaffold_42 StringTie exon 1405047 1405089 1000 - . gene_id "MSTRG.84739"; transcript_id "MSTRG.84739.1"; exon_number "2"; scaffold_42 StringTie exon 1405569 1405659 1000 - . gene_id "MSTRG.84739"; transcript_id "MSTRG.84739.1"; exon_number "3"; scaffold_42 StringTie exon 1406064 1406456 1000 - . gene_id "MSTRG.84739"; transcript_id "MSTRG.84739.1"; exon_number "4"; scaffold_42 StringTie exon 1624692 1624929 1000 . . gene_id "MSTRG.84759"; transcript_id "MSTRG.84759.1"; exon_number "1"; scaffold_42 StringTie exon 1751695 1751825 1000 - . gene_id "MSTRG.84773"; transcript_id "MSTRG.84773.1"; exon_number "1"; scaffold_42 StringTie exon 1752110 1752197 1000 - . gene_id "MSTRG.84773"; transcript_id "MSTRG.84773.1"; exon_number "2"; scaffold_42 StringTie exon 1752348 1752476 1000 - . gene_id "MSTRG.84773"; transcript_id "MSTRG.84773.1"; exon_number "3"; scaffold_42 StringTie exon 1752758 1752831 1000 - . gene_id "MSTRG.84773"; transcript_id "MSTRG.84773.1"; exon_number "4"; scaffold_42 StringTie exon 1752930 1753001 1000 - . gene_id "MSTRG.84773"; transcript_id "MSTRG.84773.1"; exon_number "5"; scaffold_42 StringTie exon 1753233 1753292 1000 - . gene_id "MSTRG.84773"; transcript_id "MSTRG.84773.1"; exon_number "6"; scaffold_42 StringTie exon 1863025 1863203 1000 - . gene_id "MSTRG.84784"; transcript_id "MSTRG.84784.1"; exon_number "1"; scaffold_42 StringTie exon 1880940 1880973 1000 - . gene_id "MSTRG.84784"; transcript_id "MSTRG.84784.1"; exon_number "2"; scaffold_42 StringTie exon 1915153 1916402 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "1"; scaffold_42 StringTie exon 1916515 1916617 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "2"; scaffold_42 StringTie exon 1916702 1916885 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "3"; scaffold_42 StringTie exon 1917118 1917200 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "4"; scaffold_42 StringTie exon 1917329 1917395 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "5"; scaffold_42 StringTie exon 1919124 1919290 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "6"; scaffold_42 StringTie exon 1919505 1919648 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "7"; scaffold_42 StringTie exon 1919867 1920034 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "8"; scaffold_42 StringTie exon 1920257 1920355 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "9"; scaffold_42 StringTie exon 1920482 1920601 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "10"; scaffold_42 StringTie exon 1920816 1920988 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "11"; scaffold_42 StringTie exon 1924137 1924326 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "12"; scaffold_42 StringTie exon 1924588 1924699 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "13"; scaffold_42 StringTie exon 1924954 1925013 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "14"; scaffold_42 StringTie exon 1925160 1925287 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "15"; scaffold_42 StringTie exon 1925557 1925633 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "16"; scaffold_42 StringTie exon 1925739 1925899 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "17"; scaffold_42 StringTie exon 1926169 1926299 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "18"; scaffold_42 StringTie exon 1931317 1931408 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "19"; scaffold_42 StringTie exon 1931502 1931723 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "20"; scaffold_42 StringTie exon 1934852 1934928 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "21"; scaffold_42 StringTie exon 1935165 1935324 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "22"; scaffold_42 StringTie exon 1935450 1935731 1000 - . gene_id "MSTRG.84785"; transcript_id "MSTRG.84785.4"; exon_number "23"; scaffold_42 StringTie exon 1965962 1966366 1000 - . gene_id "MSTRG.84801"; transcript_id "MSTRG.84801.1"; exon_number "1"; scaffold_42 StringTie exon 1967523 1967599 1000 - . gene_id "MSTRG.84801"; transcript_id "MSTRG.84801.1"; exon_number "2"; scaffold_42 StringTie exon 2001949 2002253 1000 - . gene_id "MSTRG.84808"; transcript_id "MSTRG.84808.1"; exon_number "1"; scaffold_42 StringTie exon 2011957 2012290 1000 - . gene_id "MSTRG.84808"; transcript_id "MSTRG.84808.1"; exon_number "2"; scaffold_42 StringTie exon 2017374 2017680 1000 . . gene_id "MSTRG.84810"; transcript_id "MSTRG.84810.1"; exon_number "1"; scaffold_420 StringTie exon 84687 85143 1000 . . gene_id "MSTRG.84826"; transcript_id "MSTRG.84826.1"; exon_number "1"; scaffold_4202 StringTie exon 17308 17532 1000 . . gene_id "MSTRG.84900"; transcript_id "MSTRG.84900.1"; exon_number "1"; scaffold_42057 StringTie exon 151 494 1000 . . gene_id "MSTRG.84927"; transcript_id "MSTRG.84927.1"; exon_number "1"; scaffold_4208 StringTie exon 6872 7531 1000 . . gene_id "MSTRG.84949"; transcript_id "MSTRG.84949.1"; exon_number "1"; scaffold_4211 StringTie exon 35349 35626 1000 . . gene_id "MSTRG.85012"; transcript_id "MSTRG.85012.1"; exon_number "1"; scaffold_4211 StringTie exon 39330 39616 1000 - . gene_id "MSTRG.85013"; transcript_id "MSTRG.85013.1"; exon_number "1"; scaffold_4211 StringTie exon 39664 39703 1000 - . gene_id "MSTRG.85013"; transcript_id "MSTRG.85013.1"; exon_number "2"; scaffold_4213 StringTie exon 24539 24836 1000 . . gene_id "MSTRG.85022"; transcript_id "MSTRG.85022.1"; exon_number "1"; scaffold_4216 StringTie exon 29566 29927 1000 . . gene_id "MSTRG.85043"; transcript_id "MSTRG.85043.1"; exon_number "1"; scaffold_422 StringTie exon 148581 148841 1000 . . gene_id "MSTRG.85085"; transcript_id "MSTRG.85085.1"; exon_number "1"; scaffold_422 StringTie exon 273110 273327 1000 . . gene_id "MSTRG.85094"; transcript_id "MSTRG.85094.1"; exon_number "1"; scaffold_422 StringTie exon 499657 499995 1000 . . gene_id "MSTRG.85114"; transcript_id "MSTRG.85114.1"; exon_number "1"; scaffold_422 StringTie exon 671159 671922 1000 - . gene_id "MSTRG.85135"; transcript_id "MSTRG.85135.1"; exon_number "1"; scaffold_422 StringTie exon 672383 672446 1000 - . gene_id "MSTRG.85135"; transcript_id "MSTRG.85135.1"; exon_number "2"; scaffold_422 StringTie exon 672541 672806 1000 - . gene_id "MSTRG.85135"; transcript_id "MSTRG.85135.1"; exon_number "3"; scaffold_422 StringTie exon 672937 673003 1000 - . gene_id "MSTRG.85135"; transcript_id "MSTRG.85135.1"; exon_number "4"; scaffold_422 StringTie exon 675362 675742 1000 . . gene_id "MSTRG.85137"; transcript_id "MSTRG.85137.1"; exon_number "1"; scaffold_422 StringTie exon 676088 676428 1000 - . gene_id "MSTRG.85138"; transcript_id "MSTRG.85138.1"; exon_number "1"; scaffold_422 StringTie exon 676626 676727 1000 - . gene_id "MSTRG.85138"; transcript_id "MSTRG.85138.1"; exon_number "2"; scaffold_422 StringTie exon 676953 677019 1000 - . gene_id "MSTRG.85138"; transcript_id "MSTRG.85138.1"; exon_number "3"; scaffold_422 StringTie exon 677261 677366 1000 - . gene_id "MSTRG.85138"; transcript_id "MSTRG.85138.1"; exon_number "4"; scaffold_422 StringTie exon 677522 677652 1000 - . gene_id "MSTRG.85138"; transcript_id "MSTRG.85138.1"; exon_number "5"; scaffold_422 StringTie exon 679685 680103 1000 - . gene_id "MSTRG.85138"; transcript_id "MSTRG.85138.1"; exon_number "6"; scaffold_4221 StringTie exon 3437 3654 1000 . . gene_id "MSTRG.85160"; transcript_id "MSTRG.85160.1"; exon_number "1"; scaffold_4221 StringTie exon 15546 16109 1000 - . gene_id "MSTRG.85162"; transcript_id "MSTRG.85162.1"; exon_number "1"; scaffold_4221 StringTie exon 40933 41274 1000 . . gene_id "MSTRG.85165"; transcript_id "MSTRG.85165.1"; exon_number "1"; scaffold_42241 StringTie exon 1261 1597 1000 . . gene_id "MSTRG.85180"; transcript_id "MSTRG.85180.1"; exon_number "1"; scaffold_42270 StringTie exon 740 1041 1000 . . gene_id "MSTRG.85197"; transcript_id "MSTRG.85197.1"; exon_number "1"; scaffold_42279 StringTie exon 994 1281 1000 . . gene_id "MSTRG.85199"; transcript_id "MSTRG.85199.1"; exon_number "1"; scaffold_4229 StringTie exon 22584 22821 1000 . . gene_id "MSTRG.85206"; transcript_id "MSTRG.85206.1"; exon_number "1"; scaffold_423 StringTie exon 144413 144856 1000 . . gene_id "MSTRG.85223"; transcript_id "MSTRG.85223.1"; exon_number "1"; scaffold_423 StringTie exon 472756 473096 1000 . . gene_id "MSTRG.85256"; transcript_id "MSTRG.85256.1"; exon_number "1"; scaffold_423 StringTie exon 491870 492143 1000 - . gene_id "MSTRG.85259"; transcript_id "MSTRG.85259.1"; exon_number "1"; scaffold_423 StringTie exon 493826 493879 1000 - . gene_id "MSTRG.85259"; transcript_id "MSTRG.85259.1"; exon_number "2"; scaffold_423 StringTie exon 818168 818934 1000 . . gene_id "MSTRG.85279"; transcript_id "MSTRG.85279.1"; exon_number "1"; scaffold_4230 StringTie exon 43238 43543 1000 . . gene_id "MSTRG.85288"; transcript_id "MSTRG.85288.1"; exon_number "1"; scaffold_4233 StringTie exon 26954 27346 1000 . . gene_id "MSTRG.85305"; transcript_id "MSTRG.85305.1"; exon_number "1"; scaffold_4235 StringTie exon 23481 24163 1000 . . gene_id "MSTRG.85325"; transcript_id "MSTRG.85325.1"; exon_number "1"; scaffold_4239 StringTie exon 24792 25576 1000 . . gene_id "MSTRG.85350"; transcript_id "MSTRG.85350.1"; exon_number "1"; scaffold_424 StringTie exon 192309 192997 1000 . . gene_id "MSTRG.85371"; transcript_id "MSTRG.85371.1"; exon_number "1"; scaffold_424 StringTie exon 193301 193684 1000 . . gene_id "MSTRG.85372"; transcript_id "MSTRG.85372.1"; exon_number "1"; scaffold_4240 StringTie exon 28417 28629 1000 . . gene_id "MSTRG.85396"; transcript_id "MSTRG.85396.1"; exon_number "1"; scaffold_42446 StringTie exon 1 333 1000 . . gene_id "MSTRG.85434"; transcript_id "MSTRG.85434.1"; exon_number "1"; scaffold_42465 StringTie exon 919 1202 1000 . . gene_id "MSTRG.85443"; transcript_id "MSTRG.85443.1"; exon_number "1"; scaffold_4247 StringTie exon 38872 39114 1000 . . gene_id "MSTRG.85450"; transcript_id "MSTRG.85450.1"; exon_number "1"; scaffold_4247 StringTie exon 51538 51812 1000 . . gene_id "MSTRG.85452"; transcript_id "MSTRG.85452.1"; exon_number "1"; scaffold_42477 StringTie exon 2400 3158 1000 . . gene_id "MSTRG.85457"; transcript_id "MSTRG.85457.1"; exon_number "1"; scaffold_4249 StringTie exon 15590 15801 1000 + . gene_id "MSTRG.85478"; transcript_id "MSTRG.85478.2"; exon_number "1"; scaffold_4249 StringTie exon 15924 16067 1000 + . gene_id "MSTRG.85478"; transcript_id "MSTRG.85478.2"; exon_number "2"; scaffold_4249 StringTie exon 25187 25292 1000 + . gene_id "MSTRG.85478"; transcript_id "MSTRG.85478.2"; exon_number "3"; scaffold_425 StringTie exon 166678 166883 1000 . . gene_id "MSTRG.85503"; transcript_id "MSTRG.85503.1"; exon_number "1"; scaffold_425 StringTie exon 228928 229152 1000 . . gene_id "MSTRG.85515"; transcript_id "MSTRG.85515.1"; exon_number "1"; scaffold_425 StringTie exon 771597 771905 1000 . . gene_id "MSTRG.85551"; transcript_id "MSTRG.85551.1"; exon_number "1"; scaffold_425 StringTie exon 821392 821433 1000 + . gene_id "MSTRG.85555"; transcript_id "MSTRG.85555.1"; exon_number "1"; scaffold_425 StringTie exon 821571 821727 1000 + . gene_id "MSTRG.85555"; transcript_id "MSTRG.85555.1"; exon_number "2"; scaffold_425 StringTie exon 821947 822022 1000 + . gene_id "MSTRG.85555"; transcript_id "MSTRG.85555.1"; exon_number "3"; scaffold_425 StringTie exon 822306 822350 1000 + . gene_id "MSTRG.85555"; transcript_id "MSTRG.85555.1"; exon_number "4"; scaffold_425 StringTie exon 822439 822519 1000 + . gene_id "MSTRG.85555"; transcript_id "MSTRG.85555.1"; exon_number "5"; scaffold_425 StringTie exon 822880 822942 1000 + . gene_id "MSTRG.85555"; transcript_id "MSTRG.85555.1"; exon_number "6"; scaffold_4252 StringTie exon 39882 39914 1000 - . gene_id "MSTRG.85578"; transcript_id "MSTRG.85578.1"; exon_number "1"; scaffold_4252 StringTie exon 42651 42686 1000 - . gene_id "MSTRG.85578"; transcript_id "MSTRG.85578.1"; exon_number "2"; scaffold_4252 StringTie exon 42812 42889 1000 - . gene_id "MSTRG.85578"; transcript_id "MSTRG.85578.1"; exon_number "3"; scaffold_4252 StringTie exon 42988 43047 1000 - . gene_id "MSTRG.85578"; transcript_id "MSTRG.85578.1"; exon_number "4"; scaffold_4252 StringTie exon 43398 43433 1000 - . gene_id "MSTRG.85578"; transcript_id "MSTRG.85578.1"; exon_number "5"; scaffold_4252 StringTie exon 43535 43564 1000 - . gene_id "MSTRG.85578"; transcript_id "MSTRG.85578.1"; exon_number "6"; scaffold_4252 StringTie exon 43660 43676 1000 - . gene_id "MSTRG.85578"; transcript_id "MSTRG.85578.1"; exon_number "7"; scaffold_4254 StringTie exon 4494 4734 1000 . . gene_id "MSTRG.85588"; transcript_id "MSTRG.85588.1"; exon_number "1"; scaffold_42579 StringTie exon 2 81 1000 + . gene_id "MSTRG.85611"; transcript_id "MSTRG.85611.1"; exon_number "1"; scaffold_42579 StringTie exon 107 278 1000 + . gene_id "MSTRG.85611"; transcript_id "MSTRG.85611.1"; exon_number "2"; scaffold_426 StringTie exon 28135 28175 1000 + . gene_id "MSTRG.85626"; transcript_id "MSTRG.85626.1"; exon_number "1"; scaffold_426 StringTie exon 28821 28946 1000 + . gene_id "MSTRG.85626"; transcript_id "MSTRG.85626.1"; exon_number "2"; scaffold_426 StringTie exon 29243 29564 1000 + . gene_id "MSTRG.85626"; transcript_id "MSTRG.85626.1"; exon_number "3"; scaffold_426 StringTie exon 421652 421930 1000 . . gene_id "MSTRG.85651"; transcript_id "MSTRG.85651.1"; exon_number "1"; scaffold_426 StringTie exon 548267 548978 1000 - . gene_id "MSTRG.85658"; transcript_id "MSTRG.85658.1"; exon_number "1"; scaffold_426 StringTie exon 553825 553899 1000 - . gene_id "MSTRG.85658"; transcript_id "MSTRG.85658.1"; exon_number "2"; scaffold_426 StringTie exon 553980 553998 1000 - . gene_id "MSTRG.85658"; transcript_id "MSTRG.85658.1"; exon_number "3"; scaffold_426 StringTie exon 748211 748440 1000 + . gene_id "MSTRG.85671"; transcript_id "MSTRG.85671.2"; exon_number "1"; scaffold_426 StringTie exon 748933 749008 1000 + . gene_id "MSTRG.85671"; transcript_id "MSTRG.85671.2"; exon_number "2"; scaffold_426 StringTie exon 754493 754747 1000 + . gene_id "MSTRG.85671"; transcript_id "MSTRG.85671.2"; exon_number "3"; scaffold_42625 StringTie exon 1 627 1000 . . gene_id "MSTRG.85697"; transcript_id "MSTRG.85697.1"; exon_number "1"; scaffold_42628 StringTie exon 2093 2411 1000 + . gene_id "MSTRG.85702"; transcript_id "MSTRG.85702.1"; exon_number "1"; scaffold_42628 StringTie exon 2908 3086 1000 + . gene_id "MSTRG.85702"; transcript_id "MSTRG.85702.1"; exon_number "2"; scaffold_4266 StringTie exon 47126 47335 1000 . . gene_id "MSTRG.85724"; transcript_id "MSTRG.85724.1"; exon_number "1"; scaffold_4268 StringTie exon 4866 5171 1000 . . gene_id "MSTRG.85737"; transcript_id "MSTRG.85737.1"; exon_number "1"; scaffold_42689 StringTie exon 2391 2597 1000 . . gene_id "MSTRG.85739"; transcript_id "MSTRG.85739.1"; exon_number "1"; scaffold_4269 StringTie exon 14014 16154 1000 - . gene_id "MSTRG.85742"; transcript_id "MSTRG.85742.1"; exon_number "1"; scaffold_4269 StringTie exon 16257 16332 1000 - . gene_id "MSTRG.85742"; transcript_id "MSTRG.85742.1"; exon_number "2"; scaffold_4269 StringTie exon 16451 16551 1000 - . gene_id "MSTRG.85742"; transcript_id "MSTRG.85742.1"; exon_number "3"; scaffold_4269 StringTie exon 16695 16774 1000 - . gene_id "MSTRG.85742"; transcript_id "MSTRG.85742.1"; exon_number "4"; scaffold_427 StringTie exon 15580 16356 1000 . . gene_id "MSTRG.85752"; transcript_id "MSTRG.85752.1"; exon_number "1"; scaffold_427 StringTie exon 29797 30174 1000 + . gene_id "MSTRG.85754"; transcript_id "MSTRG.85754.1"; exon_number "1"; scaffold_427 StringTie exon 33686 33756 1000 + . gene_id "MSTRG.85754"; transcript_id "MSTRG.85754.1"; exon_number "2"; scaffold_427 StringTie exon 35983 36172 1000 + . gene_id "MSTRG.85754"; transcript_id "MSTRG.85754.1"; exon_number "3"; scaffold_427 StringTie exon 140896 141395 1000 . . gene_id "MSTRG.85766"; transcript_id "MSTRG.85766.1"; exon_number "1"; scaffold_42763 StringTie exon 91 402 1000 . . gene_id "MSTRG.85863"; transcript_id "MSTRG.85863.1"; exon_number "1"; scaffold_428 StringTie exon 84919 85410 1000 . . gene_id "MSTRG.85899"; transcript_id "MSTRG.85899.1"; exon_number "1"; scaffold_428 StringTie exon 380780 380884 1000 - . gene_id "MSTRG.85940"; transcript_id "MSTRG.85940.1"; exon_number "1"; scaffold_428 StringTie exon 381028 381119 1000 - . gene_id "MSTRG.85940"; transcript_id "MSTRG.85940.1"; exon_number "2"; scaffold_428 StringTie exon 383888 383999 1000 - . gene_id "MSTRG.85940"; transcript_id "MSTRG.85940.1"; exon_number "3"; scaffold_428 StringTie exon 443082 443305 1000 . . gene_id "MSTRG.85949"; transcript_id "MSTRG.85949.1"; exon_number "1"; scaffold_428 StringTie exon 546352 546450 1000 + . gene_id "MSTRG.85954"; transcript_id "MSTRG.85954.1"; exon_number "1"; scaffold_428 StringTie exon 546566 546844 1000 + . gene_id "MSTRG.85954"; transcript_id "MSTRG.85954.1"; exon_number "2"; scaffold_428 StringTie exon 547644 547895 1000 + . gene_id "MSTRG.85954"; transcript_id "MSTRG.85954.1"; exon_number "3"; scaffold_428 StringTie exon 685083 685374 1000 . . gene_id "MSTRG.85966"; transcript_id "MSTRG.85966.1"; exon_number "1"; scaffold_4281 StringTie exon 20936 21228 1000 . . gene_id "MSTRG.85988"; transcript_id "MSTRG.85988.1"; exon_number "1"; scaffold_4285 StringTie exon 36584 36794 1000 + . gene_id "MSTRG.86019"; transcript_id "MSTRG.86019.1"; exon_number "1"; scaffold_4285 StringTie exon 37226 37438 1000 + . gene_id "MSTRG.86019"; transcript_id "MSTRG.86019.1"; exon_number "2"; scaffold_4285 StringTie exon 37730 38007 1000 + . gene_id "MSTRG.86019"; transcript_id "MSTRG.86019.1"; exon_number "3"; scaffold_42860 StringTie exon 179 478 1000 . . gene_id "MSTRG.86026"; transcript_id "MSTRG.86026.1"; exon_number "1"; scaffold_42874 StringTie exon 280 388 1000 + . gene_id "MSTRG.86031"; transcript_id "MSTRG.86031.1"; exon_number "1"; scaffold_42874 StringTie exon 690 751 1000 + . gene_id "MSTRG.86031"; transcript_id "MSTRG.86031.1"; exon_number "2"; scaffold_42874 StringTie exon 1895 2030 1000 + . gene_id "MSTRG.86031"; transcript_id "MSTRG.86031.1"; exon_number "3"; scaffold_42874 StringTie exon 2163 2172 1000 + . gene_id "MSTRG.86031"; transcript_id "MSTRG.86031.1"; exon_number "4"; scaffold_42882 StringTie exon 45 124 1000 + . gene_id "MSTRG.86039"; transcript_id "MSTRG.86039.1"; exon_number "1"; scaffold_42882 StringTie exon 201 524 1000 + . gene_id "MSTRG.86039"; transcript_id "MSTRG.86039.1"; exon_number "2"; scaffold_429 StringTie exon 312582 312853 1000 . . gene_id "MSTRG.86071"; transcript_id "MSTRG.86071.1"; exon_number "1"; scaffold_429 StringTie exon 411470 411705 1000 . . gene_id "MSTRG.86080"; transcript_id "MSTRG.86080.1"; exon_number "1"; scaffold_429 StringTie exon 426441 426574 1000 - . gene_id "MSTRG.86082"; transcript_id "MSTRG.86082.1"; exon_number "1"; scaffold_429 StringTie exon 427875 427940 1000 - . gene_id "MSTRG.86082"; transcript_id "MSTRG.86082.1"; exon_number "2"; scaffold_429 StringTie exon 431071 431176 1000 - . gene_id "MSTRG.86082"; transcript_id "MSTRG.86082.1"; exon_number "3"; scaffold_429 StringTie exon 432656 432807 1000 - . gene_id "MSTRG.86082"; transcript_id "MSTRG.86082.1"; exon_number "4"; scaffold_429 StringTie exon 433683 433840 1000 - . gene_id "MSTRG.86082"; transcript_id "MSTRG.86082.1"; exon_number "5"; scaffold_429 StringTie exon 461459 461599 1000 - . gene_id "MSTRG.86086"; transcript_id "MSTRG.86086.2"; exon_number "1"; scaffold_429 StringTie exon 466655 466889 1000 - . gene_id "MSTRG.86086"; transcript_id "MSTRG.86086.2"; exon_number "2"; scaffold_429 StringTie exon 467018 467076 1000 - . gene_id "MSTRG.86086"; transcript_id "MSTRG.86086.2"; exon_number "3"; scaffold_429 StringTie exon 648751 649126 1000 . . gene_id "MSTRG.86110"; transcript_id "MSTRG.86110.1"; exon_number "1"; scaffold_429 StringTie exon 699991 700228 1000 . . gene_id "MSTRG.86112"; transcript_id "MSTRG.86112.1"; exon_number "1"; scaffold_429 StringTie exon 787099 787373 1000 . . gene_id "MSTRG.86120"; transcript_id "MSTRG.86120.1"; exon_number "1"; scaffold_4292 StringTie exon 1231 1569 1000 . . gene_id "MSTRG.86141"; transcript_id "MSTRG.86141.1"; exon_number "1"; scaffold_42927 StringTie exon 1021 1228 1000 . . gene_id "MSTRG.86151"; transcript_id "MSTRG.86151.1"; exon_number "1"; scaffold_4297 StringTie exon 387 553 1000 + . gene_id "MSTRG.86179"; transcript_id "MSTRG.86179.1"; exon_number "1"; scaffold_4297 StringTie exon 1315 1448 1000 + . gene_id "MSTRG.86179"; transcript_id "MSTRG.86179.1"; exon_number "2"; scaffold_4298 StringTie exon 2789 2998 1000 . . gene_id "MSTRG.86191"; transcript_id "MSTRG.86191.1"; exon_number "1"; scaffold_43 StringTie exon 428454 428771 1000 + . gene_id "MSTRG.86249"; transcript_id "MSTRG.86249.1"; exon_number "1"; scaffold_43 StringTie exon 429059 429254 1000 + . gene_id "MSTRG.86249"; transcript_id "MSTRG.86249.1"; exon_number "2"; scaffold_43 StringTie exon 1160921 1161144 1000 . . gene_id "MSTRG.86299"; transcript_id "MSTRG.86299.1"; exon_number "1"; scaffold_43 StringTie exon 1489893 1490121 1000 . . gene_id "MSTRG.86316"; transcript_id "MSTRG.86316.1"; exon_number "1"; scaffold_43 StringTie exon 1585681 1585886 1000 . . gene_id "MSTRG.86327"; transcript_id "MSTRG.86327.1"; exon_number "1"; scaffold_43 StringTie exon 1819513 1819801 1000 . . gene_id "MSTRG.86341"; transcript_id "MSTRG.86341.1"; exon_number "1"; scaffold_43 StringTie exon 2223332 2223679 1000 . . gene_id "MSTRG.86388"; transcript_id "MSTRG.86388.1"; exon_number "1"; scaffold_430 StringTie exon 55933 56147 1000 . . gene_id "MSTRG.86390"; transcript_id "MSTRG.86390.1"; exon_number "1"; scaffold_430 StringTie exon 317417 317465 1000 - . gene_id "MSTRG.86402"; transcript_id "MSTRG.86402.1"; exon_number "1"; scaffold_430 StringTie exon 339741 339949 1000 - . gene_id "MSTRG.86402"; transcript_id "MSTRG.86402.1"; exon_number "2"; scaffold_430 StringTie exon 340589 340908 1000 - . gene_id "MSTRG.86402"; transcript_id "MSTRG.86402.1"; exon_number "3"; scaffold_4300 StringTie exon 34691 34949 1000 - . gene_id "MSTRG.86429"; transcript_id "MSTRG.86429.1"; exon_number "1"; scaffold_4301 StringTie exon 10498 10645 1000 - . gene_id "MSTRG.86433"; transcript_id "MSTRG.86433.1"; exon_number "1"; scaffold_4301 StringTie exon 10782 10867 1000 - . gene_id "MSTRG.86433"; transcript_id "MSTRG.86433.1"; exon_number "2"; scaffold_4303 StringTie exon 19154 21021 1000 . . gene_id "MSTRG.86446"; transcript_id "MSTRG.86446.1"; exon_number "1"; scaffold_4305 StringTie exon 3295 3501 1000 + . gene_id "MSTRG.86464"; transcript_id "MSTRG.86464.1"; exon_number "1"; scaffold_4305 StringTie exon 4028 4282 1000 + . gene_id "MSTRG.86464"; transcript_id "MSTRG.86464.1"; exon_number "2"; scaffold_4305 StringTie exon 9365 9435 1000 + . gene_id "MSTRG.86464"; transcript_id "MSTRG.86464.1"; exon_number "3"; scaffold_4305 StringTie exon 9752 9807 1000 + . gene_id "MSTRG.86464"; transcript_id "MSTRG.86464.1"; exon_number "4"; scaffold_4305 StringTie exon 9916 9986 1000 + . gene_id "MSTRG.86464"; transcript_id "MSTRG.86464.1"; exon_number "5"; scaffold_4305 StringTie exon 10202 10318 1000 + . gene_id "MSTRG.86464"; transcript_id "MSTRG.86464.1"; exon_number "6"; scaffold_4305 StringTie exon 10434 10490 1000 + . gene_id "MSTRG.86464"; transcript_id "MSTRG.86464.1"; exon_number "7"; scaffold_4305 StringTie exon 10600 10630 1000 + . gene_id "MSTRG.86464"; transcript_id "MSTRG.86464.1"; exon_number "8"; scaffold_4306 StringTie exon 9704 9782 1000 + . gene_id "MSTRG.86476"; transcript_id "MSTRG.86476.1"; exon_number "1"; scaffold_4306 StringTie exon 10107 10233 1000 + . gene_id "MSTRG.86476"; transcript_id "MSTRG.86476.1"; exon_number "2"; scaffold_4306 StringTie exon 19573 19667 1000 + . gene_id "MSTRG.86476"; transcript_id "MSTRG.86476.1"; exon_number "3"; scaffold_4306 StringTie exon 20829 21009 1000 + . gene_id "MSTRG.86476"; transcript_id "MSTRG.86476.1"; exon_number "4"; scaffold_4306 StringTie exon 26333 26960 1000 + . gene_id "MSTRG.86476"; transcript_id "MSTRG.86476.1"; exon_number "5"; scaffold_43084 StringTie exon 653 838 1000 - . gene_id "MSTRG.86499"; transcript_id "MSTRG.86499.1"; exon_number "1"; scaffold_43084 StringTie exon 924 1133 1000 - . gene_id "MSTRG.86499"; transcript_id "MSTRG.86499.1"; exon_number "2"; scaffold_4309 StringTie exon 13657 14051 1000 . . gene_id "MSTRG.86504"; transcript_id "MSTRG.86504.1"; exon_number "1"; scaffold_43093 StringTie exon 2833 3095 1000 . . gene_id "MSTRG.86506"; transcript_id "MSTRG.86506.1"; exon_number "1"; scaffold_431 StringTie exon 416991 418057 1000 . . gene_id "MSTRG.86548"; transcript_id "MSTRG.86548.1"; exon_number "1"; scaffold_431 StringTie exon 460475 461304 1000 . . gene_id "MSTRG.86552"; transcript_id "MSTRG.86552.1"; exon_number "1"; scaffold_431 StringTie exon 580164 580382 1000 . . gene_id "MSTRG.86557"; transcript_id "MSTRG.86557.1"; exon_number "1"; scaffold_431 StringTie exon 706362 706634 1000 . . gene_id "MSTRG.86565"; transcript_id "MSTRG.86565.1"; exon_number "1"; scaffold_4310 StringTie exon 3538 3746 1000 . . gene_id "MSTRG.86571"; transcript_id "MSTRG.86571.1"; exon_number "1"; scaffold_43126 StringTie exon 810 894 1000 + . gene_id "MSTRG.86589"; transcript_id "MSTRG.86589.1"; exon_number "1"; scaffold_43126 StringTie exon 1219 1413 1000 + . gene_id "MSTRG.86589"; transcript_id "MSTRG.86589.1"; exon_number "2"; scaffold_43126 StringTie exon 2409 2452 1000 + . gene_id "MSTRG.86589"; transcript_id "MSTRG.86589.1"; exon_number "3"; scaffold_43141 StringTie exon 1442 1770 1000 . . gene_id "MSTRG.86597"; transcript_id "MSTRG.86597.1"; exon_number "1"; scaffold_4315 StringTie exon 993 1317 1000 . . gene_id "MSTRG.86604"; transcript_id "MSTRG.86604.1"; exon_number "1"; scaffold_4318 StringTie exon 12589 12893 1000 . . gene_id "MSTRG.86626"; transcript_id "MSTRG.86626.1"; exon_number "1"; scaffold_4318 StringTie exon 47185 47232 1000 - . gene_id "MSTRG.86637"; transcript_id "MSTRG.86637.1"; exon_number "1"; scaffold_4318 StringTie exon 47353 47517 1000 - . gene_id "MSTRG.86637"; transcript_id "MSTRG.86637.1"; exon_number "2"; scaffold_4318 StringTie exon 48062 48149 1000 - . gene_id "MSTRG.86637"; transcript_id "MSTRG.86637.1"; exon_number "3"; scaffold_43189 StringTie exon 1452 2091 1000 . . gene_id "MSTRG.86643"; transcript_id "MSTRG.86643.1"; exon_number "1"; scaffold_4319 StringTie exon 25828 26050 1000 . . gene_id "MSTRG.86646"; transcript_id "MSTRG.86646.1"; exon_number "1"; scaffold_432 StringTie exon 260675 260789 1000 + . gene_id "MSTRG.86675"; transcript_id "MSTRG.86675.1"; exon_number "1"; scaffold_432 StringTie exon 262150 262239 1000 + . gene_id "MSTRG.86675"; transcript_id "MSTRG.86675.1"; exon_number "2"; scaffold_432 StringTie exon 344064 344426 1000 . . gene_id "MSTRG.86690"; transcript_id "MSTRG.86690.1"; exon_number "1"; scaffold_432 StringTie exon 660208 660541 1000 . . gene_id "MSTRG.86712"; transcript_id "MSTRG.86712.1"; exon_number "1"; scaffold_4320 StringTie exon 31634 31871 1000 . . gene_id "MSTRG.86733"; transcript_id "MSTRG.86733.1"; exon_number "1"; scaffold_43201 StringTie exon 2494 2699 1000 . . gene_id "MSTRG.86736"; transcript_id "MSTRG.86736.1"; exon_number "1"; scaffold_43231 StringTie exon 100 322 1000 . . gene_id "MSTRG.86762"; transcript_id "MSTRG.86762.1"; exon_number "1"; scaffold_43259 StringTie exon 2467 2781 1000 . . gene_id "MSTRG.86783"; transcript_id "MSTRG.86783.1"; exon_number "1"; scaffold_4326 StringTie exon 6612 7016 1000 . . gene_id "MSTRG.86785"; transcript_id "MSTRG.86785.1"; exon_number "1"; scaffold_43295 StringTie exon 1812 2542 1000 . . gene_id "MSTRG.86818"; transcript_id "MSTRG.86818.1"; exon_number "1"; scaffold_433 StringTie exon 232263 232469 1000 . . gene_id "MSTRG.86835"; transcript_id "MSTRG.86835.1"; exon_number "1"; scaffold_433 StringTie exon 259009 259288 1000 . . gene_id "MSTRG.86838"; transcript_id "MSTRG.86838.1"; exon_number "1"; scaffold_433 StringTie exon 439484 439750 1000 + . gene_id "MSTRG.86851"; transcript_id "MSTRG.86851.1"; exon_number "1"; scaffold_433 StringTie exon 808475 808718 1000 . . gene_id "MSTRG.86873"; transcript_id "MSTRG.86873.1"; exon_number "1"; scaffold_4330 StringTie exon 29353 29560 1000 . . gene_id "MSTRG.86875"; transcript_id "MSTRG.86875.1"; exon_number "1"; scaffold_4333 StringTie exon 9377 9713 1000 . . gene_id "MSTRG.86895"; transcript_id "MSTRG.86895.1"; exon_number "1"; scaffold_4338 StringTie exon 14097 14344 1000 . . gene_id "MSTRG.86924"; transcript_id "MSTRG.86924.1"; exon_number "1"; scaffold_43387 StringTie exon 1068 1319 1000 . . gene_id "MSTRG.86931"; transcript_id "MSTRG.86931.1"; exon_number "1"; scaffold_434 StringTie exon 274640 274879 1000 . . gene_id "MSTRG.86944"; transcript_id "MSTRG.86944.1"; exon_number "1"; scaffold_434 StringTie exon 327369 327414 1000 + . gene_id "MSTRG.86951"; transcript_id "MSTRG.86951.1"; exon_number "1"; scaffold_434 StringTie exon 332067 332422 1000 + . gene_id "MSTRG.86951"; transcript_id "MSTRG.86951.1"; exon_number "2"; scaffold_434 StringTie exon 402924 403141 1000 . . gene_id "MSTRG.86956"; transcript_id "MSTRG.86956.1"; exon_number "1"; scaffold_434 StringTie exon 661243 661259 1000 - . gene_id "MSTRG.86977"; transcript_id "MSTRG.86977.1"; exon_number "1"; scaffold_434 StringTie exon 661356 661485 1000 - . gene_id "MSTRG.86977"; transcript_id "MSTRG.86977.1"; exon_number "2"; scaffold_434 StringTie exon 661622 661742 1000 - . gene_id "MSTRG.86977"; transcript_id "MSTRG.86977.1"; exon_number "3"; scaffold_434 StringTie exon 662012 662062 1000 - . gene_id "MSTRG.86977"; transcript_id "MSTRG.86977.1"; exon_number "4"; scaffold_434 StringTie exon 770448 770503 1000 + . gene_id "MSTRG.86985"; transcript_id "MSTRG.86985.1"; exon_number "1"; scaffold_434 StringTie exon 770634 770745 1000 + . gene_id "MSTRG.86985"; transcript_id "MSTRG.86985.1"; exon_number "2"; scaffold_434 StringTie exon 770966 771022 1000 + . gene_id "MSTRG.86985"; transcript_id "MSTRG.86985.1"; exon_number "3"; scaffold_434 StringTie exon 781470 781958 1000 . . gene_id "MSTRG.86987"; transcript_id "MSTRG.86987.1"; exon_number "1"; scaffold_43418 StringTie exon 3 246 1000 . . gene_id "MSTRG.87008"; transcript_id "MSTRG.87008.1"; exon_number "1"; scaffold_43436 StringTie exon 1555 2069 1000 . . gene_id "MSTRG.87014"; transcript_id "MSTRG.87014.1"; exon_number "1"; scaffold_4345 StringTie exon 17836 18221 1000 . . gene_id "MSTRG.87022"; transcript_id "MSTRG.87022.1"; exon_number "1"; scaffold_4346 StringTie exon 5126 5341 1000 . . gene_id "MSTRG.87026"; transcript_id "MSTRG.87026.1"; exon_number "1"; scaffold_4346 StringTie exon 41000 41221 1000 . . gene_id "MSTRG.87032"; transcript_id "MSTRG.87032.1"; exon_number "1"; scaffold_4346 StringTie exon 41988 42210 1000 . . gene_id "MSTRG.87033"; transcript_id "MSTRG.87033.1"; exon_number "1"; scaffold_43481 StringTie exon 2013 2357 1000 . . gene_id "MSTRG.87052"; transcript_id "MSTRG.87052.1"; exon_number "1"; scaffold_43491 StringTie exon 2819 3112 1000 . . gene_id "MSTRG.87056"; transcript_id "MSTRG.87056.1"; exon_number "1"; scaffold_435 StringTie exon 251632 251841 1000 . . gene_id "MSTRG.87090"; transcript_id "MSTRG.87090.1"; exon_number "1"; scaffold_43534 StringTie exon 281 498 1000 . . gene_id "MSTRG.87147"; transcript_id "MSTRG.87147.1"; exon_number "1"; scaffold_4354 StringTie exon 46998 47236 1000 . . gene_id "MSTRG.87157"; transcript_id "MSTRG.87157.1"; exon_number "1"; scaffold_4354 StringTie exon 47552 47774 1000 . . gene_id "MSTRG.87158"; transcript_id "MSTRG.87158.1"; exon_number "1"; scaffold_43577 StringTie exon 1944 2654 1000 . . gene_id "MSTRG.87173"; transcript_id "MSTRG.87173.1"; exon_number "1"; scaffold_436 StringTie exon 509263 509377 1000 - . gene_id "MSTRG.87209"; transcript_id "MSTRG.87209.1"; exon_number "1"; scaffold_436 StringTie exon 509504 509608 1000 - . gene_id "MSTRG.87209"; transcript_id "MSTRG.87209.1"; exon_number "2"; scaffold_436 StringTie exon 509896 510065 1000 - . gene_id "MSTRG.87209"; transcript_id "MSTRG.87209.1"; exon_number "3"; scaffold_436 StringTie exon 510220 510298 1000 - . gene_id "MSTRG.87209"; transcript_id "MSTRG.87209.1"; exon_number "4"; scaffold_436 StringTie exon 511400 511674 1000 - . gene_id "MSTRG.87209"; transcript_id "MSTRG.87209.1"; exon_number "5"; scaffold_436 StringTie exon 745617 745688 1000 + . gene_id "MSTRG.87217"; transcript_id "MSTRG.87217.1"; exon_number "1"; scaffold_436 StringTie exon 759702 759765 1000 + . gene_id "MSTRG.87217"; transcript_id "MSTRG.87217.1"; exon_number "2"; scaffold_436 StringTie exon 760000 760062 1000 + . gene_id "MSTRG.87217"; transcript_id "MSTRG.87217.1"; exon_number "3"; scaffold_436 StringTie exon 760856 760959 1000 + . gene_id "MSTRG.87217"; transcript_id "MSTRG.87217.1"; exon_number "4"; scaffold_436 StringTie exon 765836 766033 1000 + . gene_id "MSTRG.87217"; transcript_id "MSTRG.87217.1"; exon_number "5"; scaffold_436 StringTie exon 784633 784847 1000 + . gene_id "MSTRG.87217"; transcript_id "MSTRG.87217.1"; exon_number "6"; scaffold_436 StringTie exon 788147 788271 1000 + . gene_id "MSTRG.87217"; transcript_id "MSTRG.87217.1"; exon_number "7"; scaffold_436 StringTie exon 794966 795296 1000 . . gene_id "MSTRG.87218"; transcript_id "MSTRG.87218.1"; exon_number "1"; scaffold_4365 StringTie exon 50806 51029 1000 . . gene_id "MSTRG.87258"; transcript_id "MSTRG.87258.1"; exon_number "1"; scaffold_4366 StringTie exon 41370 41464 1000 + . gene_id "MSTRG.87267"; transcript_id "MSTRG.87267.1"; exon_number "1"; scaffold_4366 StringTie exon 41588 41666 1000 + . gene_id "MSTRG.87267"; transcript_id "MSTRG.87267.1"; exon_number "2"; scaffold_4366 StringTie exon 41764 41853 1000 + . gene_id "MSTRG.87267"; transcript_id "MSTRG.87267.1"; exon_number "3"; scaffold_43671 StringTie exon 1 576 1000 . . gene_id "MSTRG.87282"; transcript_id "MSTRG.87282.1"; exon_number "1"; scaffold_437 StringTie exon 34206 34482 1000 . . gene_id "MSTRG.87299"; transcript_id "MSTRG.87299.1"; exon_number "1"; scaffold_437 StringTie exon 130237 130436 1000 . . gene_id "MSTRG.87305"; transcript_id "MSTRG.87305.1"; exon_number "1"; scaffold_437 StringTie exon 329258 330299 1000 - . gene_id "MSTRG.87311"; transcript_id "MSTRG.87311.1"; exon_number "1"; scaffold_437 StringTie exon 333241 333299 1000 - . gene_id "MSTRG.87311"; transcript_id "MSTRG.87311.1"; exon_number "2"; scaffold_437 StringTie exon 333473 333519 1000 - . gene_id "MSTRG.87311"; transcript_id "MSTRG.87311.1"; exon_number "3"; scaffold_437 StringTie exon 336091 336160 1000 - . gene_id "MSTRG.87311"; transcript_id "MSTRG.87311.1"; exon_number "4"; scaffold_437 StringTie exon 337659 337797 1000 - . gene_id "MSTRG.87311"; transcript_id "MSTRG.87311.1"; exon_number "5"; scaffold_437 StringTie exon 340644 340851 1000 - . gene_id "MSTRG.87311"; transcript_id "MSTRG.87311.1"; exon_number "6"; scaffold_437 StringTie exon 359012 359709 1000 - . gene_id "MSTRG.87311"; transcript_id "MSTRG.87311.1"; exon_number "7"; scaffold_437 StringTie exon 383566 383797 1000 . . gene_id "MSTRG.87314"; transcript_id "MSTRG.87314.1"; exon_number "1"; scaffold_437 StringTie exon 555079 555118 1000 + . gene_id "MSTRG.87328"; transcript_id "MSTRG.87328.1"; exon_number "1"; scaffold_437 StringTie exon 556088 556204 1000 + . gene_id "MSTRG.87328"; transcript_id "MSTRG.87328.1"; exon_number "2"; scaffold_437 StringTie exon 558986 559078 1000 + . gene_id "MSTRG.87328"; transcript_id "MSTRG.87328.1"; exon_number "3"; scaffold_43736 StringTie exon 16 602 1000 . . gene_id "MSTRG.87371"; transcript_id "MSTRG.87371.1"; exon_number "1"; scaffold_4375 StringTie exon 3331 3691 1000 . . gene_id "MSTRG.87379"; transcript_id "MSTRG.87379.1"; exon_number "1"; scaffold_43754 StringTie exon 2692 2920 1000 . . gene_id "MSTRG.87385"; transcript_id "MSTRG.87385.1"; exon_number "1"; scaffold_4377 StringTie exon 11055 11259 1000 . . gene_id "MSTRG.87398"; transcript_id "MSTRG.87398.1"; exon_number "1"; scaffold_4379 StringTie exon 11000 11410 1000 . . gene_id "MSTRG.87418"; transcript_id "MSTRG.87418.1"; exon_number "1"; scaffold_43792 StringTie exon 229 1437 1000 . . gene_id "MSTRG.87421"; transcript_id "MSTRG.87421.1"; exon_number "1"; scaffold_438 StringTie exon 3647 3813 1000 + . gene_id "MSTRG.87425"; transcript_id "MSTRG.87425.1"; exon_number "1"; scaffold_438 StringTie exon 16581 16753 1000 + . gene_id "MSTRG.87425"; transcript_id "MSTRG.87425.1"; exon_number "2"; scaffold_438 StringTie exon 528750 528949 1000 . . gene_id "MSTRG.87453"; transcript_id "MSTRG.87453.1"; exon_number "1"; scaffold_438 StringTie exon 736832 737636 1000 . . gene_id "MSTRG.87459"; transcript_id "MSTRG.87459.1"; exon_number "1"; scaffold_4380 StringTie exon 18404 18481 1000 - . gene_id "MSTRG.87465"; transcript_id "MSTRG.87465.1"; exon_number "1"; scaffold_4380 StringTie exon 18901 18973 1000 - . gene_id "MSTRG.87465"; transcript_id "MSTRG.87465.1"; exon_number "2"; scaffold_4380 StringTie exon 19163 19232 1000 - . gene_id "MSTRG.87465"; transcript_id "MSTRG.87465.1"; exon_number "3"; scaffold_4380 StringTie exon 20241 20379 1000 - . gene_id "MSTRG.87465"; transcript_id "MSTRG.87465.1"; exon_number "4"; scaffold_4380 StringTie exon 20543 20641 1000 - . gene_id "MSTRG.87465"; transcript_id "MSTRG.87465.1"; exon_number "5"; scaffold_4380 StringTie exon 20834 20982 1000 - . gene_id "MSTRG.87465"; transcript_id "MSTRG.87465.1"; exon_number "6"; scaffold_4380 StringTie exon 21133 21287 1000 - . gene_id "MSTRG.87465"; transcript_id "MSTRG.87465.1"; exon_number "7"; scaffold_43812 StringTie exon 343 543 1000 . . gene_id "MSTRG.87479"; transcript_id "MSTRG.87479.1"; exon_number "1"; scaffold_4386 StringTie exon 14681 14895 1000 . . gene_id "MSTRG.87508"; transcript_id "MSTRG.87508.1"; exon_number "1"; scaffold_43871 StringTie exon 1964 2018 1000 + . gene_id "MSTRG.87520"; transcript_id "MSTRG.87520.1"; exon_number "1"; scaffold_43871 StringTie exon 2830 2990 1000 + . gene_id "MSTRG.87520"; transcript_id "MSTRG.87520.1"; exon_number "2"; scaffold_4388 StringTie exon 7619 7935 1000 . . gene_id "MSTRG.87524"; transcript_id "MSTRG.87524.1"; exon_number "1"; scaffold_439 StringTie exon 158224 158423 1000 . . gene_id "MSTRG.87554"; transcript_id "MSTRG.87554.1"; exon_number "1"; scaffold_439 StringTie exon 283249 283496 1000 . . gene_id "MSTRG.87559"; transcript_id "MSTRG.87559.1"; exon_number "1"; scaffold_439 StringTie exon 418523 418664 1000 - . gene_id "MSTRG.87579"; transcript_id "MSTRG.87579.1"; exon_number "1"; scaffold_439 StringTie exon 418777 418859 1000 - . gene_id "MSTRG.87579"; transcript_id "MSTRG.87579.1"; exon_number "2"; scaffold_439 StringTie exon 712926 713327 1000 . . gene_id "MSTRG.87600"; transcript_id "MSTRG.87600.1"; exon_number "1"; scaffold_43912 StringTie exon 1612 1844 1000 . . gene_id "MSTRG.87624"; transcript_id "MSTRG.87624.1"; exon_number "1"; scaffold_4393 StringTie exon 476 501 1000 + . gene_id "MSTRG.87631"; transcript_id "MSTRG.87631.1"; exon_number "1"; scaffold_4393 StringTie exon 1407 2077 1000 + . gene_id "MSTRG.87631"; transcript_id "MSTRG.87631.1"; exon_number "2"; scaffold_4397 StringTie exon 46876 47126 1000 - . gene_id "MSTRG.87671"; transcript_id "MSTRG.87671.1"; exon_number "1"; scaffold_4397 StringTie exon 47229 47399 1000 - . gene_id "MSTRG.87671"; transcript_id "MSTRG.87671.1"; exon_number "2"; scaffold_43990 StringTie exon 1580 1981 1000 . . gene_id "MSTRG.87683"; transcript_id "MSTRG.87683.1"; exon_number "1"; scaffold_44 StringTie exon 50058 50265 1000 . . gene_id "MSTRG.87687"; transcript_id "MSTRG.87687.1"; exon_number "1"; scaffold_44 StringTie exon 532027 532396 1000 . . gene_id "MSTRG.87726"; transcript_id "MSTRG.87726.1"; exon_number "1"; scaffold_44 StringTie exon 714242 714518 1000 . . gene_id "MSTRG.87741"; transcript_id "MSTRG.87741.1"; exon_number "1"; scaffold_44 StringTie exon 721638 721884 1000 . . gene_id "MSTRG.87742"; transcript_id "MSTRG.87742.1"; exon_number "1"; scaffold_44 StringTie exon 841808 842080 1000 . . gene_id "MSTRG.87748"; transcript_id "MSTRG.87748.1"; exon_number "1"; scaffold_44 StringTie exon 1274417 1274742 1000 . . gene_id "MSTRG.87763"; transcript_id "MSTRG.87763.1"; exon_number "1"; scaffold_44 StringTie exon 1354646 1354867 1000 . . gene_id "MSTRG.87764"; transcript_id "MSTRG.87764.1"; exon_number "1"; scaffold_44 StringTie exon 1459991 1460146 1000 + . gene_id "MSTRG.87772"; transcript_id "MSTRG.87772.1"; exon_number "1"; scaffold_44 StringTie exon 1460330 1460440 1000 + . gene_id "MSTRG.87772"; transcript_id "MSTRG.87772.1"; exon_number "2"; scaffold_44 StringTie exon 1460544 1460773 1000 + . gene_id "MSTRG.87772"; transcript_id "MSTRG.87772.1"; exon_number "3"; scaffold_44 StringTie exon 1469684 1469759 1000 - . gene_id "MSTRG.87775"; transcript_id "MSTRG.87775.1"; exon_number "1"; scaffold_44 StringTie exon 1470217 1470412 1000 - . gene_id "MSTRG.87775"; transcript_id "MSTRG.87775.1"; exon_number "2"; scaffold_44 StringTie exon 1580677 1580938 1000 . . gene_id "MSTRG.87787"; transcript_id "MSTRG.87787.1"; exon_number "1"; scaffold_44 StringTie exon 2026367 2026703 1000 . . gene_id "MSTRG.87804"; transcript_id "MSTRG.87804.1"; exon_number "1"; scaffold_44 StringTie exon 2110295 2110357 1000 + . gene_id "MSTRG.87815"; transcript_id "MSTRG.87815.1"; exon_number "1"; scaffold_44 StringTie exon 2111506 2111589 1000 + . gene_id "MSTRG.87815"; transcript_id "MSTRG.87815.1"; exon_number "2"; scaffold_44 StringTie exon 2111902 2111985 1000 + . gene_id "MSTRG.87815"; transcript_id "MSTRG.87815.1"; exon_number "3"; scaffold_44 StringTie exon 2113431 2113526 1000 + . gene_id "MSTRG.87815"; transcript_id "MSTRG.87815.1"; exon_number "4"; scaffold_44 StringTie exon 2116120 2116207 1000 + . gene_id "MSTRG.87815"; transcript_id "MSTRG.87815.1"; exon_number "5"; scaffold_44 StringTie exon 2116521 2116545 1000 + . gene_id "MSTRG.87815"; transcript_id "MSTRG.87815.1"; exon_number "6"; scaffold_44 StringTie exon 2146199 2146705 1000 . . gene_id "MSTRG.87818"; transcript_id "MSTRG.87818.1"; exon_number "1"; scaffold_440 StringTie exon 38240 38440 1000 . . gene_id "MSTRG.87827"; transcript_id "MSTRG.87827.1"; exon_number "1"; scaffold_440 StringTie exon 169009 169063 1000 - . gene_id "MSTRG.87838"; transcript_id "MSTRG.87838.1"; exon_number "1"; scaffold_440 StringTie exon 237946 238196 1000 - . gene_id "MSTRG.87838"; transcript_id "MSTRG.87838.1"; exon_number "2"; scaffold_440 StringTie exon 483995 484232 1000 . . gene_id "MSTRG.87852"; transcript_id "MSTRG.87852.1"; exon_number "1"; scaffold_44008 StringTie exon 1370 1572 1000 . . gene_id "MSTRG.87869"; transcript_id "MSTRG.87869.1"; exon_number "1"; scaffold_4403 StringTie exon 4936 5381 1000 . . gene_id "MSTRG.87890"; transcript_id "MSTRG.87890.1"; exon_number "1"; scaffold_44033 StringTie exon 1312 1574 1000 . . gene_id "MSTRG.87900"; transcript_id "MSTRG.87900.1"; exon_number "1"; scaffold_4404 StringTie exon 5268 5613 1000 . . gene_id "MSTRG.87904"; transcript_id "MSTRG.87904.1"; exon_number "1"; scaffold_44070 StringTie exon 1112 1252 1000 - . gene_id "MSTRG.87927"; transcript_id "MSTRG.87927.1"; exon_number "1"; scaffold_44070 StringTie exon 1355 1518 1000 - . gene_id "MSTRG.87927"; transcript_id "MSTRG.87927.1"; exon_number "2"; scaffold_44070 StringTie exon 2099 2180 1000 - . gene_id "MSTRG.87927"; transcript_id "MSTRG.87927.1"; exon_number "3"; scaffold_44097 StringTie exon 683 731 1000 + . gene_id "MSTRG.87941"; transcript_id "MSTRG.87941.1"; exon_number "1"; scaffold_44097 StringTie exon 2086 2480 1000 + . gene_id "MSTRG.87941"; transcript_id "MSTRG.87941.1"; exon_number "2"; scaffold_441 StringTie exon 29985 30567 1000 . . gene_id "MSTRG.87944"; transcript_id "MSTRG.87944.1"; exon_number "1"; scaffold_441 StringTie exon 182311 182566 1000 . . gene_id "MSTRG.87949"; transcript_id "MSTRG.87949.1"; exon_number "1"; scaffold_441 StringTie exon 366264 366490 1000 . . gene_id "MSTRG.87959"; transcript_id "MSTRG.87959.1"; exon_number "1"; scaffold_441 StringTie exon 530515 530779 1000 . . gene_id "MSTRG.87966"; transcript_id "MSTRG.87966.1"; exon_number "1"; scaffold_4410 StringTie exon 2714 3052 1000 . . gene_id "MSTRG.87992"; transcript_id "MSTRG.87992.1"; exon_number "1"; scaffold_4410 StringTie exon 34221 34481 1000 + . gene_id "MSTRG.87996"; transcript_id "MSTRG.87996.1"; exon_number "1"; scaffold_44102 StringTie exon 24 1285 1000 . . gene_id "MSTRG.88002"; transcript_id "MSTRG.88002.1"; exon_number "1"; scaffold_44102 StringTie exon 2038 2246 1000 . . gene_id "MSTRG.88003"; transcript_id "MSTRG.88003.1"; exon_number "1"; scaffold_44111 StringTie exon 2548 2918 1000 . . gene_id "MSTRG.88007"; transcript_id "MSTRG.88007.1"; exon_number "1"; scaffold_4414 StringTie exon 34488 34765 1000 . . gene_id "MSTRG.88021"; transcript_id "MSTRG.88021.1"; exon_number "1"; scaffold_44174 StringTie exon 263 632 1000 . . gene_id "MSTRG.88039"; transcript_id "MSTRG.88039.1"; exon_number "1"; scaffold_442 StringTie exon 42529 42555 1000 - . gene_id "MSTRG.88056"; transcript_id "MSTRG.88056.1"; exon_number "1"; scaffold_442 StringTie exon 43863 44056 1000 - . gene_id "MSTRG.88056"; transcript_id "MSTRG.88056.1"; exon_number "2"; scaffold_442 StringTie exon 44265 44289 1000 - . gene_id "MSTRG.88056"; transcript_id "MSTRG.88056.1"; exon_number "3"; scaffold_442 StringTie exon 61744 61867 1000 - . gene_id "MSTRG.88062"; transcript_id "MSTRG.88062.2"; exon_number "1"; scaffold_442 StringTie exon 62188 62408 1000 - . gene_id "MSTRG.88062"; transcript_id "MSTRG.88062.2"; exon_number "2"; scaffold_442 StringTie exon 62778 62987 1000 - . gene_id "MSTRG.88062"; transcript_id "MSTRG.88062.2"; exon_number "3"; scaffold_442 StringTie exon 203105 203190 1000 + . gene_id "MSTRG.88077"; transcript_id "MSTRG.88077.2"; exon_number "1"; scaffold_442 StringTie exon 205100 205248 1000 + . gene_id "MSTRG.88077"; transcript_id "MSTRG.88077.2"; exon_number "2"; scaffold_442 StringTie exon 247548 247951 1000 . . gene_id "MSTRG.88083"; transcript_id "MSTRG.88083.1"; exon_number "1"; scaffold_442 StringTie exon 294515 294611 1000 + . gene_id "MSTRG.88084"; transcript_id "MSTRG.88084.2"; exon_number "1"; scaffold_442 StringTie exon 294709 294847 1000 + . gene_id "MSTRG.88084"; transcript_id "MSTRG.88084.2"; exon_number "2"; scaffold_442 StringTie exon 294949 295026 1000 + . gene_id "MSTRG.88084"; transcript_id "MSTRG.88084.2"; exon_number "3"; scaffold_442 StringTie exon 304853 304965 1000 + . gene_id "MSTRG.88089"; transcript_id "MSTRG.88089.1"; exon_number "1"; scaffold_442 StringTie exon 305074 305370 1000 + . gene_id "MSTRG.88089"; transcript_id "MSTRG.88089.1"; exon_number "2"; scaffold_442 StringTie exon 305516 305620 1000 + . gene_id "MSTRG.88089"; transcript_id "MSTRG.88089.1"; exon_number "3"; scaffold_442 StringTie exon 305734 305829 1000 + . gene_id "MSTRG.88089"; transcript_id "MSTRG.88089.1"; exon_number "4"; scaffold_442 StringTie exon 305917 306051 1000 + . gene_id "MSTRG.88089"; transcript_id "MSTRG.88089.1"; exon_number "5"; scaffold_442 StringTie exon 306330 306378 1000 + . gene_id "MSTRG.88089"; transcript_id "MSTRG.88089.1"; exon_number "6"; scaffold_442 StringTie exon 306580 306730 1000 + . gene_id "MSTRG.88089"; transcript_id "MSTRG.88089.1"; exon_number "7"; scaffold_442 StringTie exon 415308 415411 1000 + . gene_id "MSTRG.88097"; transcript_id "MSTRG.88097.1"; exon_number "1"; scaffold_442 StringTie exon 415585 415768 1000 + . gene_id "MSTRG.88097"; transcript_id "MSTRG.88097.1"; exon_number "2"; scaffold_442 StringTie exon 416604 416769 1000 + . gene_id "MSTRG.88097"; transcript_id "MSTRG.88097.1"; exon_number "3"; scaffold_442 StringTie exon 416881 417005 1000 + . gene_id "MSTRG.88097"; transcript_id "MSTRG.88097.1"; exon_number "4"; scaffold_442 StringTie exon 417093 417158 1000 + . gene_id "MSTRG.88097"; transcript_id "MSTRG.88097.1"; exon_number "5"; scaffold_442 StringTie exon 444746 445188 1000 . . gene_id "MSTRG.88099"; transcript_id "MSTRG.88099.1"; exon_number "1"; scaffold_442 StringTie exon 541123 541350 1000 . . gene_id "MSTRG.88107"; transcript_id "MSTRG.88107.1"; exon_number "1"; scaffold_442 StringTie exon 710240 710454 1000 . . gene_id "MSTRG.88112"; transcript_id "MSTRG.88112.1"; exon_number "1"; scaffold_4420 StringTie exon 25593 25833 1000 . . gene_id "MSTRG.88120"; transcript_id "MSTRG.88120.1"; exon_number "1"; scaffold_4421 StringTie exon 40176 40759 1000 . . gene_id "MSTRG.88129"; transcript_id "MSTRG.88129.1"; exon_number "1"; scaffold_4422 StringTie exon 43142 43355 1000 . . gene_id "MSTRG.88137"; transcript_id "MSTRG.88137.1"; exon_number "1"; scaffold_44258 StringTie exon 2806 3005 1000 . . gene_id "MSTRG.88165"; transcript_id "MSTRG.88165.1"; exon_number "1"; scaffold_4429 StringTie exon 39643 39848 1000 . . gene_id "MSTRG.88189"; transcript_id "MSTRG.88189.1"; exon_number "1"; scaffold_443 StringTie exon 298544 298794 1000 . . gene_id "MSTRG.88211"; transcript_id "MSTRG.88211.1"; exon_number "1"; scaffold_4431 StringTie exon 14601 14903 1000 . . gene_id "MSTRG.88255"; transcript_id "MSTRG.88255.1"; exon_number "1"; scaffold_4432 StringTie exon 30201 30472 1000 . . gene_id "MSTRG.88263"; transcript_id "MSTRG.88263.1"; exon_number "1"; scaffold_44326 StringTie exon 1462 1702 1000 . . gene_id "MSTRG.88264"; transcript_id "MSTRG.88264.1"; exon_number "1"; scaffold_44360 StringTie exon 533 737 1000 . . gene_id "MSTRG.88283"; transcript_id "MSTRG.88283.1"; exon_number "1"; scaffold_4439 StringTie exon 43099 43474 1000 . . gene_id "MSTRG.88296"; transcript_id "MSTRG.88296.1"; exon_number "1"; scaffold_444 StringTie exon 215689 215946 1000 . . gene_id "MSTRG.88319"; transcript_id "MSTRG.88319.1"; exon_number "1"; scaffold_444 StringTie exon 291494 291857 1000 . . gene_id "MSTRG.88325"; transcript_id "MSTRG.88325.1"; exon_number "1"; scaffold_444 StringTie exon 569331 569530 1000 . . gene_id "MSTRG.88339"; transcript_id "MSTRG.88339.1"; exon_number "1"; scaffold_444 StringTie exon 779404 779459 1000 + . gene_id "MSTRG.88342"; transcript_id "MSTRG.88342.1"; exon_number "1"; scaffold_444 StringTie exon 788890 789029 1000 + . gene_id "MSTRG.88342"; transcript_id "MSTRG.88342.1"; exon_number "2"; scaffold_444 StringTie exon 789266 789373 1000 + . gene_id "MSTRG.88342"; transcript_id "MSTRG.88342.1"; exon_number "3"; scaffold_444 StringTie exon 789482 789516 1000 + . gene_id "MSTRG.88342"; transcript_id "MSTRG.88342.1"; exon_number "4"; scaffold_444 StringTie exon 789657 789791 1000 + . gene_id "MSTRG.88342"; transcript_id "MSTRG.88342.1"; exon_number "5"; scaffold_44420 StringTie exon 260 474 1000 . . gene_id "MSTRG.88361"; transcript_id "MSTRG.88361.1"; exon_number "1"; scaffold_4443 StringTie exon 25 351 1000 . . gene_id "MSTRG.88363"; transcript_id "MSTRG.88363.1"; exon_number "1"; scaffold_4446 StringTie exon 18251 18476 1000 . . gene_id "MSTRG.88383"; transcript_id "MSTRG.88383.1"; exon_number "1"; scaffold_4447 StringTie exon 44315 44633 1000 . . gene_id "MSTRG.88389"; transcript_id "MSTRG.88389.1"; exon_number "1"; scaffold_445 StringTie exon 116217 116501 1000 + . gene_id "MSTRG.88409"; transcript_id "MSTRG.88409.1"; exon_number "1"; scaffold_445 StringTie exon 232466 232647 1000 - . gene_id "MSTRG.88425"; transcript_id "MSTRG.88425.1"; exon_number "1"; scaffold_445 StringTie exon 232824 232927 1000 - . gene_id "MSTRG.88425"; transcript_id "MSTRG.88425.1"; exon_number "2"; scaffold_4456 StringTie exon 40547 40839 1000 . . gene_id "MSTRG.88530"; transcript_id "MSTRG.88530.1"; exon_number "1"; scaffold_446 StringTie exon 403835 404188 1000 . . gene_id "MSTRG.88584"; transcript_id "MSTRG.88584.1"; exon_number "1"; scaffold_446 StringTie exon 572387 572599 1000 . . gene_id "MSTRG.88597"; transcript_id "MSTRG.88597.1"; exon_number "1"; scaffold_4460 StringTie exon 21531 21779 1000 . . gene_id "MSTRG.88620"; transcript_id "MSTRG.88620.1"; exon_number "1"; scaffold_44631 StringTie exon 1828 1901 1000 - . gene_id "MSTRG.88641"; transcript_id "MSTRG.88641.1"; exon_number "1"; scaffold_44631 StringTie exon 1999 2125 1000 - . gene_id "MSTRG.88641"; transcript_id "MSTRG.88641.1"; exon_number "2"; scaffold_44643 StringTie exon 76 397 1000 . . gene_id "MSTRG.88654"; transcript_id "MSTRG.88654.1"; exon_number "1"; scaffold_44649 StringTie exon 460 730 1000 . . gene_id "MSTRG.88655"; transcript_id "MSTRG.88655.1"; exon_number "1"; scaffold_44660 StringTie exon 2446 2729 1000 . . gene_id "MSTRG.88668"; transcript_id "MSTRG.88668.1"; exon_number "1"; scaffold_4468 StringTie exon 21323 21614 1000 . . gene_id "MSTRG.88675"; transcript_id "MSTRG.88675.1"; exon_number "1"; scaffold_4469 StringTie exon 110 301 1000 + . gene_id "MSTRG.88682"; transcript_id "MSTRG.88682.1"; exon_number "1"; scaffold_4469 StringTie exon 435 523 1000 + . gene_id "MSTRG.88682"; transcript_id "MSTRG.88682.1"; exon_number "2"; scaffold_4469 StringTie exon 2143 2333 1000 + . gene_id "MSTRG.88682"; transcript_id "MSTRG.88682.1"; exon_number "3"; scaffold_4469 StringTie exon 2778 2988 1000 + . gene_id "MSTRG.88682"; transcript_id "MSTRG.88682.1"; exon_number "4"; scaffold_447 StringTie exon 199805 200024 1000 . . gene_id "MSTRG.88695"; transcript_id "MSTRG.88695.1"; exon_number "1"; scaffold_447 StringTie exon 353966 355343 1000 . . gene_id "MSTRG.88703"; transcript_id "MSTRG.88703.1"; exon_number "1"; scaffold_4470 StringTie exon 23204 23784 1000 . . gene_id "MSTRG.88735"; transcript_id "MSTRG.88735.1"; exon_number "1"; scaffold_44734 StringTie exon 296 503 1000 . . gene_id "MSTRG.88759"; transcript_id "MSTRG.88759.1"; exon_number "1"; scaffold_44740 StringTie exon 1111 1415 1000 + . gene_id "MSTRG.88766"; transcript_id "MSTRG.88766.1"; exon_number "1"; scaffold_44740 StringTie exon 1593 1711 1000 + . gene_id "MSTRG.88766"; transcript_id "MSTRG.88766.1"; exon_number "2"; scaffold_44740 StringTie exon 1881 1947 1000 + . gene_id "MSTRG.88766"; transcript_id "MSTRG.88766.1"; exon_number "3"; scaffold_4476 StringTie exon 28801 29041 1000 . . gene_id "MSTRG.88781"; transcript_id "MSTRG.88781.1"; exon_number "1"; scaffold_44773 StringTie exon 703 969 1000 . . gene_id "MSTRG.88793"; transcript_id "MSTRG.88793.1"; exon_number "1"; scaffold_448 StringTie exon 259067 259365 1000 . . gene_id "MSTRG.88817"; transcript_id "MSTRG.88817.1"; exon_number "1"; scaffold_448 StringTie exon 574215 574262 1000 + . gene_id "MSTRG.88832"; transcript_id "MSTRG.88832.2"; exon_number "1"; scaffold_448 StringTie exon 574488 574686 1000 + . gene_id "MSTRG.88832"; transcript_id "MSTRG.88832.2"; exon_number "2"; scaffold_448 StringTie exon 574788 575020 1000 + . gene_id "MSTRG.88832"; transcript_id "MSTRG.88832.2"; exon_number "3"; scaffold_448 StringTie exon 635248 635258 1000 + . gene_id "MSTRG.88832"; transcript_id "MSTRG.88832.2"; exon_number "4"; scaffold_448 StringTie exon 577723 577899 1000 + . gene_id "MSTRG.88833"; transcript_id "MSTRG.88833.2"; exon_number "1"; scaffold_448 StringTie exon 578025 578186 1000 + . gene_id "MSTRG.88833"; transcript_id "MSTRG.88833.2"; exon_number "2"; scaffold_448 StringTie exon 582350 582440 1000 + . gene_id "MSTRG.88833"; transcript_id "MSTRG.88833.2"; exon_number "3"; scaffold_448 StringTie exon 588445 588531 1000 + . gene_id "MSTRG.88833"; transcript_id "MSTRG.88833.2"; exon_number "4"; scaffold_448 StringTie exon 588717 588841 1000 + . gene_id "MSTRG.88833"; transcript_id "MSTRG.88833.2"; exon_number "5"; scaffold_448 StringTie exon 751777 752013 1000 . . gene_id "MSTRG.88842"; transcript_id "MSTRG.88842.1"; exon_number "1"; scaffold_44845 StringTie exon 135 337 1000 - . gene_id "MSTRG.88880"; transcript_id "MSTRG.88880.1"; exon_number "1"; scaffold_44845 StringTie exon 518 532 1000 - . gene_id "MSTRG.88880"; transcript_id "MSTRG.88880.1"; exon_number "2"; scaffold_44860 StringTie exon 2331 2963 1000 . . gene_id "MSTRG.88889"; transcript_id "MSTRG.88889.1"; exon_number "1"; scaffold_449 StringTie exon 200953 201351 1000 - . gene_id "MSTRG.88925"; transcript_id "MSTRG.88925.1"; exon_number "1"; scaffold_449 StringTie exon 201467 201632 1000 - . gene_id "MSTRG.88925"; transcript_id "MSTRG.88925.1"; exon_number "2"; scaffold_449 StringTie exon 201906 202030 1000 - . gene_id "MSTRG.88925"; transcript_id "MSTRG.88925.1"; exon_number "3"; scaffold_449 StringTie exon 520060 520250 1000 + . gene_id "MSTRG.88945"; transcript_id "MSTRG.88945.1"; exon_number "1"; scaffold_449 StringTie exon 520387 520427 1000 + . gene_id "MSTRG.88945"; transcript_id "MSTRG.88945.1"; exon_number "2"; scaffold_449 StringTie exon 554547 555057 1000 . . gene_id "MSTRG.88952"; transcript_id "MSTRG.88952.1"; exon_number "1"; scaffold_4490 StringTie exon 19924 19940 1000 - . gene_id "MSTRG.88964"; transcript_id "MSTRG.88964.1"; exon_number "1"; scaffold_4490 StringTie exon 20193 20246 1000 - . gene_id "MSTRG.88964"; transcript_id "MSTRG.88964.1"; exon_number "2"; scaffold_4490 StringTie exon 20484 20620 1000 - . gene_id "MSTRG.88964"; transcript_id "MSTRG.88964.1"; exon_number "3"; scaffold_44914 StringTie exon 424 654 1000 + . gene_id "MSTRG.88972"; transcript_id "MSTRG.88972.1"; exon_number "1"; scaffold_44914 StringTie exon 1404 1489 1000 + . gene_id "MSTRG.88972"; transcript_id "MSTRG.88972.1"; exon_number "2"; scaffold_4493 StringTie exon 1025 1155 1000 - . gene_id "MSTRG.88980"; transcript_id "MSTRG.88980.1"; exon_number "1"; scaffold_4493 StringTie exon 1277 1414 1000 - . gene_id "MSTRG.88980"; transcript_id "MSTRG.88980.1"; exon_number "2"; scaffold_4493 StringTie exon 1561 1628 1000 - . gene_id "MSTRG.88980"; transcript_id "MSTRG.88980.1"; exon_number "3"; scaffold_4493 StringTie exon 3457 3599 1000 - . gene_id "MSTRG.88980"; transcript_id "MSTRG.88980.1"; exon_number "4"; scaffold_4494 StringTie exon 28315 28567 1000 . . gene_id "MSTRG.88990"; transcript_id "MSTRG.88990.1"; exon_number "1"; scaffold_4495 StringTie exon 14528 14818 1000 . . gene_id "MSTRG.88994"; transcript_id "MSTRG.88994.1"; exon_number "1"; scaffold_44953 StringTie exon 673 690 1000 + . gene_id "MSTRG.88998"; transcript_id "MSTRG.88998.1"; exon_number "1"; scaffold_44953 StringTie exon 1009 1171 1000 + . gene_id "MSTRG.88998"; transcript_id "MSTRG.88998.1"; exon_number "2"; scaffold_44953 StringTie exon 1640 1768 1000 + . gene_id "MSTRG.88998"; transcript_id "MSTRG.88998.1"; exon_number "3"; scaffold_44953 StringTie exon 2045 2070 1000 + . gene_id "MSTRG.88998"; transcript_id "MSTRG.88998.1"; exon_number "4"; scaffold_44964 StringTie exon 1786 1931 1000 - . gene_id "MSTRG.89011"; transcript_id "MSTRG.89011.1"; exon_number "1"; scaffold_44964 StringTie exon 2211 2382 1000 - . gene_id "MSTRG.89011"; transcript_id "MSTRG.89011.1"; exon_number "2"; scaffold_44964 StringTie exon 2605 2701 1000 - . gene_id "MSTRG.89011"; transcript_id "MSTRG.89011.1"; exon_number "3"; scaffold_44964 StringTie exon 2804 2953 1000 - . gene_id "MSTRG.89011"; transcript_id "MSTRG.89011.1"; exon_number "4"; scaffold_44975 StringTie exon 661 908 1000 . . gene_id "MSTRG.89023"; transcript_id "MSTRG.89023.1"; exon_number "1"; scaffold_4498 StringTie exon 33232 33710 1000 . . gene_id "MSTRG.89025"; transcript_id "MSTRG.89025.1"; exon_number "1"; scaffold_45 StringTie exon 170418 170769 1000 . . gene_id "MSTRG.89060"; transcript_id "MSTRG.89060.1"; exon_number "1"; scaffold_45 StringTie exon 503375 504017 1000 . . gene_id "MSTRG.89090"; transcript_id "MSTRG.89090.1"; exon_number "1"; scaffold_45 StringTie exon 574691 574963 1000 . . gene_id "MSTRG.89098"; transcript_id "MSTRG.89098.1"; exon_number "1"; scaffold_45 StringTie exon 577498 578073 1000 . . gene_id "MSTRG.89099"; transcript_id "MSTRG.89099.1"; exon_number "1"; scaffold_45 StringTie exon 582928 583382 1000 . . gene_id "MSTRG.89102"; transcript_id "MSTRG.89102.1"; exon_number "1"; scaffold_45 StringTie exon 595163 596135 1000 . . gene_id "MSTRG.89108"; transcript_id "MSTRG.89108.1"; exon_number "1"; scaffold_45 StringTie exon 690141 690221 1000 - . gene_id "MSTRG.89123"; transcript_id "MSTRG.89123.1"; exon_number "1"; scaffold_45 StringTie exon 694007 694098 1000 - . gene_id "MSTRG.89123"; transcript_id "MSTRG.89123.1"; exon_number "2"; scaffold_45 StringTie exon 694252 694360 1000 - . gene_id "MSTRG.89123"; transcript_id "MSTRG.89123.1"; exon_number "3"; scaffold_45 StringTie exon 711727 711965 1000 - . gene_id "MSTRG.89123"; transcript_id "MSTRG.89123.1"; exon_number "4"; scaffold_45 StringTie exon 869702 870108 1000 . . gene_id "MSTRG.89148"; transcript_id "MSTRG.89148.1"; exon_number "1"; scaffold_45 StringTie exon 897016 897288 1000 . . gene_id "MSTRG.89152"; transcript_id "MSTRG.89152.1"; exon_number "1"; scaffold_45 StringTie exon 1261265 1261497 1000 . . gene_id "MSTRG.89181"; transcript_id "MSTRG.89181.1"; exon_number "1"; scaffold_45 StringTie exon 1262504 1262719 1000 . . gene_id "MSTRG.89182"; transcript_id "MSTRG.89182.1"; exon_number "1"; scaffold_45 StringTie exon 1372847 1373071 1000 . . gene_id "MSTRG.89192"; transcript_id "MSTRG.89192.1"; exon_number "1"; scaffold_45 StringTie exon 1455109 1455188 1000 - . gene_id "MSTRG.89198"; transcript_id "MSTRG.89198.1"; exon_number "1"; scaffold_45 StringTie exon 1455506 1455671 1000 - . gene_id "MSTRG.89198"; transcript_id "MSTRG.89198.1"; exon_number "2"; scaffold_45 StringTie exon 1456080 1456278 1000 - . gene_id "MSTRG.89198"; transcript_id "MSTRG.89198.1"; exon_number "3"; scaffold_45 StringTie exon 1456479 1456715 1000 - . gene_id "MSTRG.89198"; transcript_id "MSTRG.89198.1"; exon_number "4"; scaffold_45 StringTie exon 1457856 1457958 1000 - . gene_id "MSTRG.89198"; transcript_id "MSTRG.89198.1"; exon_number "5"; scaffold_450 StringTie exon 78060 78343 1000 . . gene_id "MSTRG.89244"; transcript_id "MSTRG.89244.1"; exon_number "1"; scaffold_450 StringTie exon 335045 335244 1000 - . gene_id "MSTRG.89266"; transcript_id "MSTRG.89266.1"; exon_number "1"; scaffold_450 StringTie exon 339044 339290 1000 - . gene_id "MSTRG.89266"; transcript_id "MSTRG.89266.1"; exon_number "2"; scaffold_450 StringTie exon 679051 679314 1000 . . gene_id "MSTRG.89291"; transcript_id "MSTRG.89291.1"; exon_number "1"; scaffold_45006 StringTie exon 785 1244 1000 . . gene_id "MSTRG.89300"; transcript_id "MSTRG.89300.1"; exon_number "1"; scaffold_4503 StringTie exon 37202 37777 1000 . . gene_id "MSTRG.89312"; transcript_id "MSTRG.89312.1"; exon_number "1"; scaffold_45044 StringTie exon 1884 2213 1000 . . gene_id "MSTRG.89322"; transcript_id "MSTRG.89322.1"; exon_number "1"; scaffold_451 StringTie exon 220082 220341 1000 . . gene_id "MSTRG.89360"; transcript_id "MSTRG.89360.1"; exon_number "1"; scaffold_451 StringTie exon 241124 243009 1000 . . gene_id "MSTRG.89363"; transcript_id "MSTRG.89363.1"; exon_number "1"; scaffold_451 StringTie exon 594261 594315 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "1"; scaffold_451 StringTie exon 594819 594917 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "2"; scaffold_451 StringTie exon 595044 595088 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "3"; scaffold_451 StringTie exon 595239 595337 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "4"; scaffold_451 StringTie exon 595484 595537 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "5"; scaffold_451 StringTie exon 595735 595842 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "6"; scaffold_451 StringTie exon 596568 596621 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "7"; scaffold_451 StringTie exon 596779 596877 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "8"; scaffold_451 StringTie exon 597108 597161 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "9"; scaffold_451 StringTie exon 597295 597393 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "10"; scaffold_451 StringTie exon 597741 597848 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "11"; scaffold_451 StringTie exon 598140 598193 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "12"; scaffold_451 StringTie exon 598309 598362 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "13"; scaffold_451 StringTie exon 598571 598616 1000 + . gene_id "MSTRG.89382"; transcript_id "MSTRG.89382.1"; exon_number "14"; scaffold_45111 StringTie exon 1001 1602 1000 . . gene_id "MSTRG.89397"; transcript_id "MSTRG.89397.1"; exon_number "1"; scaffold_4512 StringTie exon 48784 49002 1000 . . gene_id "MSTRG.89402"; transcript_id "MSTRG.89402.1"; exon_number "1"; scaffold_4516 StringTie exon 40068 40568 1000 . . gene_id "MSTRG.89434"; transcript_id "MSTRG.89434.1"; exon_number "1"; scaffold_4516 StringTie exon 46379 46639 1000 . . gene_id "MSTRG.89437"; transcript_id "MSTRG.89437.1"; exon_number "1"; scaffold_452 StringTie exon 18163 18391 1000 . . gene_id "MSTRG.89463"; transcript_id "MSTRG.89463.1"; exon_number "1"; scaffold_452 StringTie exon 198420 198684 1000 . . gene_id "MSTRG.89475"; transcript_id "MSTRG.89475.1"; exon_number "1"; scaffold_45212 StringTie exon 1255 2477 1000 . . gene_id "MSTRG.89507"; transcript_id "MSTRG.89507.1"; exon_number "1"; scaffold_45234 StringTie exon 1204 1482 1000 + . gene_id "MSTRG.89521"; transcript_id "MSTRG.89521.1"; exon_number "1"; scaffold_45234 StringTie exon 1662 2620 1000 + . gene_id "MSTRG.89521"; transcript_id "MSTRG.89521.1"; exon_number "2"; scaffold_4524 StringTie exon 42518 42741 1000 . . gene_id "MSTRG.89528"; transcript_id "MSTRG.89528.1"; exon_number "1"; scaffold_45240 StringTie exon 1214 1462 1000 . . gene_id "MSTRG.89529"; transcript_id "MSTRG.89529.1"; exon_number "1"; scaffold_45260 StringTie exon 89 544 1000 . . gene_id "MSTRG.89542"; transcript_id "MSTRG.89542.1"; exon_number "1"; scaffold_45291 StringTie exon 2127 2264 1000 - . gene_id "MSTRG.89558"; transcript_id "MSTRG.89558.1"; exon_number "1"; scaffold_45291 StringTie exon 2554 2625 1000 - . gene_id "MSTRG.89558"; transcript_id "MSTRG.89558.1"; exon_number "2"; scaffold_453 StringTie exon 88739 88995 1000 . . gene_id "MSTRG.89566"; transcript_id "MSTRG.89566.1"; exon_number "1"; scaffold_453 StringTie exon 691162 691385 1000 . . gene_id "MSTRG.89598"; transcript_id "MSTRG.89598.1"; exon_number "1"; scaffold_453 StringTie exon 744263 744501 1000 . . gene_id "MSTRG.89605"; transcript_id "MSTRG.89605.1"; exon_number "1"; scaffold_453 StringTie exon 782329 782549 1000 . . gene_id "MSTRG.89614"; transcript_id "MSTRG.89614.1"; exon_number "1"; scaffold_4532 StringTie exon 7303 7729 1000 . . gene_id "MSTRG.89631"; transcript_id "MSTRG.89631.1"; exon_number "1"; scaffold_4537 StringTie exon 2311 2557 1000 . . gene_id "MSTRG.89661"; transcript_id "MSTRG.89661.1"; exon_number "1"; scaffold_4538 StringTie exon 31283 31489 1000 - . gene_id "MSTRG.89672"; transcript_id "MSTRG.89672.1"; exon_number "1"; scaffold_4538 StringTie exon 31678 31839 1000 - . gene_id "MSTRG.89672"; transcript_id "MSTRG.89672.1"; exon_number "2"; scaffold_4538 StringTie exon 32653 33004 1000 - . gene_id "MSTRG.89672"; transcript_id "MSTRG.89672.1"; exon_number "3"; scaffold_454 StringTie exon 26348 26505 1000 + . gene_id "MSTRG.89686"; transcript_id "MSTRG.89686.1"; exon_number "1"; scaffold_454 StringTie exon 26631 26728 1000 + . gene_id "MSTRG.89686"; transcript_id "MSTRG.89686.1"; exon_number "2"; scaffold_454 StringTie exon 26991 27054 1000 + . gene_id "MSTRG.89686"; transcript_id "MSTRG.89686.1"; exon_number "3"; scaffold_454 StringTie exon 283243 283284 1000 + . gene_id "MSTRG.89711"; transcript_id "MSTRG.89711.1"; exon_number "1"; scaffold_454 StringTie exon 283493 283615 1000 + . gene_id "MSTRG.89711"; transcript_id "MSTRG.89711.1"; exon_number "2"; scaffold_454 StringTie exon 283748 283846 1000 + . gene_id "MSTRG.89711"; transcript_id "MSTRG.89711.1"; exon_number "3"; scaffold_454 StringTie exon 283937 284065 1000 + . gene_id "MSTRG.89711"; transcript_id "MSTRG.89711.1"; exon_number "4"; scaffold_454 StringTie exon 284274 284313 1000 + . gene_id "MSTRG.89711"; transcript_id "MSTRG.89711.1"; exon_number "5"; scaffold_454 StringTie exon 284515 284638 1000 + . gene_id "MSTRG.89711"; transcript_id "MSTRG.89711.1"; exon_number "6"; scaffold_454 StringTie exon 284841 285269 1000 + . gene_id "MSTRG.89711"; transcript_id "MSTRG.89711.1"; exon_number "7"; scaffold_4541 StringTie exon 7320 7338 1000 - . gene_id "MSTRG.89746"; transcript_id "MSTRG.89746.1"; exon_number "1"; scaffold_4541 StringTie exon 8017 8258 1000 - . gene_id "MSTRG.89746"; transcript_id "MSTRG.89746.1"; exon_number "2"; scaffold_4541 StringTie exon 8899 8912 1000 - . gene_id "MSTRG.89746"; transcript_id "MSTRG.89746.1"; exon_number "3"; scaffold_4542 StringTie exon 33879 34103 1000 + . gene_id "MSTRG.89757"; transcript_id "MSTRG.89757.1"; exon_number "1"; scaffold_45422 StringTie exon 50 624 1000 . . gene_id "MSTRG.89759"; transcript_id "MSTRG.89759.1"; exon_number "1"; scaffold_4543 StringTie exon 46639 47085 1000 - . gene_id "MSTRG.89761"; transcript_id "MSTRG.89761.1"; exon_number "1"; scaffold_4543 StringTie exon 47654 47770 1000 - . gene_id "MSTRG.89761"; transcript_id "MSTRG.89761.1"; exon_number "2"; scaffold_4543 StringTie exon 48075 48173 1000 - . gene_id "MSTRG.89761"; transcript_id "MSTRG.89761.1"; exon_number "3"; scaffold_4543 StringTie exon 48993 49020 1000 - . gene_id "MSTRG.89761"; transcript_id "MSTRG.89761.1"; exon_number "4"; scaffold_4545 StringTie exon 45131 45621 1000 - . gene_id "MSTRG.89779"; transcript_id "MSTRG.89779.1"; exon_number "1"; scaffold_4545 StringTie exon 45738 45844 1000 - . gene_id "MSTRG.89779"; transcript_id "MSTRG.89779.1"; exon_number "2"; scaffold_4545 StringTie exon 46208 46355 1000 - . gene_id "MSTRG.89779"; transcript_id "MSTRG.89779.1"; exon_number "3"; scaffold_45494 StringTie exon 2353 2993 1000 . . gene_id "MSTRG.89807"; transcript_id "MSTRG.89807.1"; exon_number "1"; scaffold_455 StringTie exon 144889 145413 1000 . . gene_id "MSTRG.89819"; transcript_id "MSTRG.89819.1"; exon_number "1"; scaffold_455 StringTie exon 387788 387988 1000 . . gene_id "MSTRG.89847"; transcript_id "MSTRG.89847.1"; exon_number "1"; scaffold_455 StringTie exon 593031 593278 1000 . . gene_id "MSTRG.89862"; transcript_id "MSTRG.89862.1"; exon_number "1"; scaffold_45533 StringTie exon 146 398 1000 - . gene_id "MSTRG.89899"; transcript_id "MSTRG.89899.1"; exon_number "1"; scaffold_45533 StringTie exon 1261 1355 1000 - . gene_id "MSTRG.89899"; transcript_id "MSTRG.89899.1"; exon_number "2"; scaffold_45560 StringTie exon 48 305 1000 . . gene_id "MSTRG.89926"; transcript_id "MSTRG.89926.1"; exon_number "1"; scaffold_4564 StringTie exon 25230 25521 1000 . . gene_id "MSTRG.90038"; transcript_id "MSTRG.90038.1"; exon_number "1"; scaffold_4565 StringTie exon 2193 2224 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "1"; scaffold_4565 StringTie exon 4380 4563 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "2"; scaffold_4565 StringTie exon 5764 5891 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "3"; scaffold_4565 StringTie exon 6044 6107 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "4"; scaffold_4565 StringTie exon 6273 6320 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "5"; scaffold_4565 StringTie exon 6444 6505 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "6"; scaffold_4565 StringTie exon 6606 6650 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "7"; scaffold_4565 StringTie exon 7463 7538 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "8"; scaffold_4565 StringTie exon 8618 8664 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "9"; scaffold_4565 StringTie exon 10117 10185 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "10"; scaffold_4565 StringTie exon 10363 10440 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "11"; scaffold_4565 StringTie exon 10949 11097 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "12"; scaffold_4565 StringTie exon 11357 11541 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "13"; scaffold_4565 StringTie exon 11690 11881 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "14"; scaffold_4565 StringTie exon 12133 12724 1000 + . gene_id "MSTRG.90045"; transcript_id "MSTRG.90045.1"; exon_number "15"; scaffold_45653 StringTie exon 249 633 1000 . . gene_id "MSTRG.90049"; transcript_id "MSTRG.90049.1"; exon_number "1"; scaffold_457 StringTie exon 315963 316016 1000 - . gene_id "MSTRG.90101"; transcript_id "MSTRG.90101.1"; exon_number "1"; scaffold_457 StringTie exon 316731 316870 1000 - . gene_id "MSTRG.90101"; transcript_id "MSTRG.90101.1"; exon_number "2"; scaffold_457 StringTie exon 317035 317144 1000 - . gene_id "MSTRG.90101"; transcript_id "MSTRG.90101.1"; exon_number "3"; scaffold_457 StringTie exon 317685 317747 1000 - . gene_id "MSTRG.90101"; transcript_id "MSTRG.90101.1"; exon_number "4"; scaffold_457 StringTie exon 574047 574354 1000 . . gene_id "MSTRG.90112"; transcript_id "MSTRG.90112.1"; exon_number "1"; scaffold_457 StringTie exon 658105 658903 1000 - . gene_id "MSTRG.90116"; transcript_id "MSTRG.90116.1"; exon_number "1"; scaffold_457 StringTie exon 659017 659080 1000 - . gene_id "MSTRG.90116"; transcript_id "MSTRG.90116.1"; exon_number "2"; scaffold_4571 StringTie exon 45709 45959 1000 - . gene_id "MSTRG.90148"; transcript_id "MSTRG.90148.1"; exon_number "1"; scaffold_4571 StringTie exon 49441 49717 1000 - . gene_id "MSTRG.90148"; transcript_id "MSTRG.90148.1"; exon_number "2"; scaffold_45713 StringTie exon 2246 2802 1000 . . gene_id "MSTRG.90150"; transcript_id "MSTRG.90150.1"; exon_number "1"; scaffold_45733 StringTie exon 35 312 1000 . . gene_id "MSTRG.90166"; transcript_id "MSTRG.90166.1"; exon_number "1"; scaffold_45748 StringTie exon 2770 2991 1000 - . gene_id "MSTRG.90174"; transcript_id "MSTRG.90174.1"; exon_number "1"; scaffold_4577 StringTie exon 33146 33304 1000 - . gene_id "MSTRG.90198"; transcript_id "MSTRG.90198.1"; exon_number "1"; scaffold_4577 StringTie exon 33461 33505 1000 - . gene_id "MSTRG.90198"; transcript_id "MSTRG.90198.1"; exon_number "2"; scaffold_4577 StringTie exon 33678 33702 1000 - . gene_id "MSTRG.90198"; transcript_id "MSTRG.90198.1"; exon_number "3"; scaffold_45778 StringTie exon 1723 1838 1000 - . gene_id "MSTRG.90202"; transcript_id "MSTRG.90202.1"; exon_number "1"; scaffold_45778 StringTie exon 2026 2218 1000 - . gene_id "MSTRG.90202"; transcript_id "MSTRG.90202.1"; exon_number "2"; scaffold_45778 StringTie exon 2412 2624 1000 - . gene_id "MSTRG.90202"; transcript_id "MSTRG.90202.1"; exon_number "3"; scaffold_45782 StringTie exon 2370 2689 1000 . . gene_id "MSTRG.90205"; transcript_id "MSTRG.90205.1"; exon_number "1"; scaffold_458 StringTie exon 242300 242329 1000 + . gene_id "MSTRG.90229"; transcript_id "MSTRG.90229.1"; exon_number "1"; scaffold_458 StringTie exon 243650 243758 1000 + . gene_id "MSTRG.90229"; transcript_id "MSTRG.90229.1"; exon_number "2"; scaffold_458 StringTie exon 244010 244094 1000 + . gene_id "MSTRG.90229"; transcript_id "MSTRG.90229.1"; exon_number "3"; scaffold_458 StringTie exon 244359 244377 1000 + . gene_id "MSTRG.90229"; transcript_id "MSTRG.90229.1"; exon_number "4"; scaffold_458 StringTie exon 479021 479231 1000 . . gene_id "MSTRG.90242"; transcript_id "MSTRG.90242.1"; exon_number "1"; scaffold_458 StringTie exon 510210 510472 1000 . . gene_id "MSTRG.90245"; transcript_id "MSTRG.90245.1"; exon_number "1"; scaffold_458 StringTie exon 559865 560125 1000 . . gene_id "MSTRG.90255"; transcript_id "MSTRG.90255.1"; exon_number "1"; scaffold_458 StringTie exon 575303 575348 1000 - . gene_id "MSTRG.90257"; transcript_id "MSTRG.90257.1"; exon_number "1"; scaffold_458 StringTie exon 575632 575772 1000 - . gene_id "MSTRG.90257"; transcript_id "MSTRG.90257.1"; exon_number "2"; scaffold_458 StringTie exon 575973 576033 1000 - . gene_id "MSTRG.90257"; transcript_id "MSTRG.90257.1"; exon_number "3"; scaffold_458 StringTie exon 663952 664177 1000 . . gene_id "MSTRG.90265"; transcript_id "MSTRG.90265.1"; exon_number "1"; scaffold_458 StringTie exon 786440 786642 1000 . . gene_id "MSTRG.90269"; transcript_id "MSTRG.90269.1"; exon_number "1"; scaffold_45836 StringTie exon 17 251 1000 . . gene_id "MSTRG.90298"; transcript_id "MSTRG.90298.1"; exon_number "1"; scaffold_459 StringTie exon 122123 122223 1000 + . gene_id "MSTRG.90333"; transcript_id "MSTRG.90333.2"; exon_number "1"; scaffold_459 StringTie exon 130591 130713 1000 + . gene_id "MSTRG.90333"; transcript_id "MSTRG.90333.2"; exon_number "2"; scaffold_459 StringTie exon 134714 134836 1000 + . gene_id "MSTRG.90333"; transcript_id "MSTRG.90333.2"; exon_number "3"; scaffold_459 StringTie exon 137649 137771 1000 + . gene_id "MSTRG.90333"; transcript_id "MSTRG.90333.2"; exon_number "4"; scaffold_459 StringTie exon 138840 138965 1000 + . gene_id "MSTRG.90333"; transcript_id "MSTRG.90333.2"; exon_number "5"; scaffold_459 StringTie exon 141404 141485 1000 + . gene_id "MSTRG.90335"; transcript_id "MSTRG.90335.1"; exon_number "1"; scaffold_459 StringTie exon 144062 144190 1000 + . gene_id "MSTRG.90335"; transcript_id "MSTRG.90335.1"; exon_number "2"; scaffold_459 StringTie exon 149433 149573 1000 + . gene_id "MSTRG.90335"; transcript_id "MSTRG.90335.1"; exon_number "3"; scaffold_459 StringTie exon 150729 150890 1000 + . gene_id "MSTRG.90335"; transcript_id "MSTRG.90335.1"; exon_number "4"; scaffold_459 StringTie exon 150970 151059 1000 + . gene_id "MSTRG.90335"; transcript_id "MSTRG.90335.1"; exon_number "5"; scaffold_459 StringTie exon 152108 152217 1000 + . gene_id "MSTRG.90335"; transcript_id "MSTRG.90335.1"; exon_number "6"; scaffold_459 StringTie exon 158075 158196 1000 + . gene_id "MSTRG.90335"; transcript_id "MSTRG.90335.1"; exon_number "7"; scaffold_459 StringTie exon 267513 267910 1000 - . gene_id "MSTRG.90349"; transcript_id "MSTRG.90349.1"; exon_number "1"; scaffold_459 StringTie exon 283952 283975 1000 - . gene_id "MSTRG.90349"; transcript_id "MSTRG.90349.1"; exon_number "2"; scaffold_459 StringTie exon 269125 269195 1000 - . gene_id "MSTRG.90349"; transcript_id "MSTRG.90349.2"; exon_number "1"; scaffold_459 StringTie exon 283952 284267 1000 - . gene_id "MSTRG.90349"; transcript_id "MSTRG.90349.2"; exon_number "2"; scaffold_459 StringTie exon 420296 420482 1000 + . gene_id "MSTRG.90366"; transcript_id "MSTRG.90366.1"; exon_number "1"; scaffold_459 StringTie exon 432627 432644 1000 + . gene_id "MSTRG.90366"; transcript_id "MSTRG.90366.1"; exon_number "2"; scaffold_459 StringTie exon 445970 446153 1000 + . gene_id "MSTRG.90371"; transcript_id "MSTRG.90371.1"; exon_number "1"; scaffold_459 StringTie exon 446339 446556 1000 + . gene_id "MSTRG.90371"; transcript_id "MSTRG.90371.1"; exon_number "2"; scaffold_459 StringTie exon 451438 452826 1000 . . gene_id "MSTRG.90374"; transcript_id "MSTRG.90374.1"; exon_number "1"; scaffold_459 StringTie exon 505629 505840 1000 . . gene_id "MSTRG.90376"; transcript_id "MSTRG.90376.1"; exon_number "1"; scaffold_459 StringTie exon 630478 630933 1000 - . gene_id "MSTRG.90383"; transcript_id "MSTRG.90383.1"; exon_number "1"; scaffold_459 StringTie exon 631047 631180 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "1"; scaffold_459 StringTie exon 635024 635273 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "2"; scaffold_459 StringTie exon 636387 636481 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "3"; scaffold_459 StringTie exon 636628 636703 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "4"; scaffold_459 StringTie exon 645618 645672 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "5"; scaffold_459 StringTie exon 646211 646255 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "6"; scaffold_459 StringTie exon 648766 648849 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "7"; scaffold_459 StringTie exon 654870 654913 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "8"; scaffold_459 StringTie exon 660003 660045 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "9"; scaffold_459 StringTie exon 660161 660244 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "10"; scaffold_459 StringTie exon 660405 660452 1000 - . gene_id "MSTRG.90384"; transcript_id "MSTRG.90384.1"; exon_number "11"; scaffold_45935 StringTie exon 1094 1412 1000 . . gene_id "MSTRG.90411"; transcript_id "MSTRG.90411.1"; exon_number "1"; scaffold_4596 StringTie exon 28712 29021 1000 . . gene_id "MSTRG.90429"; transcript_id "MSTRG.90429.1"; exon_number "1"; scaffold_45968 StringTie exon 2598 2827 1000 . . gene_id "MSTRG.90434"; transcript_id "MSTRG.90434.1"; exon_number "1"; scaffold_45978 StringTie exon 2156 2363 1000 . . gene_id "MSTRG.90444"; transcript_id "MSTRG.90444.1"; exon_number "1"; scaffold_45981 StringTie exon 1982 2265 1000 . . gene_id "MSTRG.90448"; transcript_id "MSTRG.90448.1"; exon_number "1"; scaffold_46 StringTie exon 247441 247714 1000 . . gene_id "MSTRG.90470"; transcript_id "MSTRG.90470.1"; exon_number "1"; scaffold_46 StringTie exon 700040 701258 1000 - . gene_id "MSTRG.90488"; transcript_id "MSTRG.90488.1"; exon_number "1"; scaffold_46 StringTie exon 701763 701920 1000 - . gene_id "MSTRG.90488"; transcript_id "MSTRG.90488.1"; exon_number "2"; scaffold_46 StringTie exon 702113 702238 1000 - . gene_id "MSTRG.90488"; transcript_id "MSTRG.90488.1"; exon_number "3"; scaffold_46 StringTie exon 702723 702765 1000 - . gene_id "MSTRG.90488"; transcript_id "MSTRG.90488.1"; exon_number "4"; scaffold_46 StringTie exon 703302 703380 1000 - . gene_id "MSTRG.90488"; transcript_id "MSTRG.90488.1"; exon_number "5"; scaffold_46 StringTie exon 704713 704841 1000 - . gene_id "MSTRG.90488"; transcript_id "MSTRG.90488.1"; exon_number "6"; scaffold_46 StringTie exon 705567 705654 1000 - . gene_id "MSTRG.90488"; transcript_id "MSTRG.90488.1"; exon_number "7"; scaffold_46 StringTie exon 848099 848347 1000 . . gene_id "MSTRG.90510"; transcript_id "MSTRG.90510.1"; exon_number "1"; scaffold_46 StringTie exon 1161177 1161378 1000 . . gene_id "MSTRG.90553"; transcript_id "MSTRG.90553.1"; exon_number "1"; scaffold_46 StringTie exon 2085164 2085428 1000 . . gene_id "MSTRG.90631"; transcript_id "MSTRG.90631.1"; exon_number "1"; scaffold_460 StringTie exon 172979 173190 1000 . . gene_id "MSTRG.90650"; transcript_id "MSTRG.90650.1"; exon_number "1"; scaffold_460 StringTie exon 181258 181584 1000 + . gene_id "MSTRG.90652"; transcript_id "MSTRG.90652.1"; exon_number "1"; scaffold_460 StringTie exon 196366 196494 1000 + . gene_id "MSTRG.90652"; transcript_id "MSTRG.90652.1"; exon_number "2"; scaffold_460 StringTie exon 196662 196740 1000 + . gene_id "MSTRG.90652"; transcript_id "MSTRG.90652.1"; exon_number "3"; scaffold_460 StringTie exon 196919 197004 1000 + . gene_id "MSTRG.90652"; transcript_id "MSTRG.90652.1"; exon_number "4"; scaffold_460 StringTie exon 197153 197221 1000 + . gene_id "MSTRG.90652"; transcript_id "MSTRG.90652.1"; exon_number "5"; scaffold_460 StringTie exon 200278 200474 1000 + . gene_id "MSTRG.90652"; transcript_id "MSTRG.90652.1"; exon_number "6"; scaffold_460 StringTie exon 200792 200895 1000 + . gene_id "MSTRG.90652"; transcript_id "MSTRG.90652.1"; exon_number "7"; scaffold_460 StringTie exon 201034 201074 1000 + . gene_id "MSTRG.90652"; transcript_id "MSTRG.90652.1"; exon_number "8"; scaffold_460 StringTie exon 512670 512949 1000 . . gene_id "MSTRG.90689"; transcript_id "MSTRG.90689.1"; exon_number "1"; scaffold_460 StringTie exon 563904 564997 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "1"; scaffold_460 StringTie exon 565088 565160 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "2"; scaffold_460 StringTie exon 565299 565395 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "3"; scaffold_460 StringTie exon 565518 565622 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "4"; scaffold_460 StringTie exon 565730 565850 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "5"; scaffold_460 StringTie exon 565955 566095 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "6"; scaffold_460 StringTie exon 566249 566382 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "7"; scaffold_460 StringTie exon 566500 566659 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "8"; scaffold_460 StringTie exon 566882 566975 1000 - . gene_id "MSTRG.90695"; transcript_id "MSTRG.90695.1"; exon_number "9"; scaffold_46049 StringTie exon 2166 2387 1000 . . gene_id "MSTRG.90775"; transcript_id "MSTRG.90775.1"; exon_number "1"; scaffold_46057 StringTie exon 2084 2364 1000 . . gene_id "MSTRG.90785"; transcript_id "MSTRG.90785.1"; exon_number "1"; scaffold_461 StringTie exon 97193 97599 1000 . . gene_id "MSTRG.90819"; transcript_id "MSTRG.90819.1"; exon_number "1"; scaffold_461 StringTie exon 147027 147131 1000 - . gene_id "MSTRG.90830"; transcript_id "MSTRG.90830.1"; exon_number "1"; scaffold_461 StringTie exon 148752 148953 1000 - . gene_id "MSTRG.90830"; transcript_id "MSTRG.90830.1"; exon_number "2"; scaffold_461 StringTie exon 153499 153552 1000 - . gene_id "MSTRG.90830"; transcript_id "MSTRG.90830.1"; exon_number "3"; scaffold_461 StringTie exon 153703 153861 1000 - . gene_id "MSTRG.90830"; transcript_id "MSTRG.90830.1"; exon_number "4"; scaffold_461 StringTie exon 155301 155385 1000 - . gene_id "MSTRG.90830"; transcript_id "MSTRG.90830.1"; exon_number "5"; scaffold_461 StringTie exon 156762 156976 1000 - . gene_id "MSTRG.90830"; transcript_id "MSTRG.90830.1"; exon_number "6"; scaffold_461 StringTie exon 157902 157986 1000 - . gene_id "MSTRG.90830"; transcript_id "MSTRG.90830.1"; exon_number "7"; scaffold_461 StringTie exon 205030 205267 1000 . . gene_id "MSTRG.90834"; transcript_id "MSTRG.90834.1"; exon_number "1"; scaffold_461 StringTie exon 365623 365850 1000 . . gene_id "MSTRG.90840"; transcript_id "MSTRG.90840.1"; exon_number "1"; scaffold_461 StringTie exon 545368 545536 1000 + . gene_id "MSTRG.90857"; transcript_id "MSTRG.90857.1"; exon_number "1"; scaffold_461 StringTie exon 545674 545740 1000 + . gene_id "MSTRG.90857"; transcript_id "MSTRG.90857.1"; exon_number "2"; scaffold_461 StringTie exon 640803 641044 1000 . . gene_id "MSTRG.90869"; transcript_id "MSTRG.90869.1"; exon_number "1"; scaffold_461 StringTie exon 725639 725966 1000 - . gene_id "MSTRG.90879"; transcript_id "MSTRG.90879.1"; exon_number "1"; scaffold_461 StringTie exon 726271 726305 1000 - . gene_id "MSTRG.90879"; transcript_id "MSTRG.90879.1"; exon_number "2"; scaffold_4614 StringTie exon 934 1155 1000 . . gene_id "MSTRG.90908"; transcript_id "MSTRG.90908.1"; exon_number "1"; scaffold_46140 StringTie exon 416 892 1000 . . gene_id "MSTRG.90909"; transcript_id "MSTRG.90909.1"; exon_number "1"; scaffold_462 StringTie exon 612543 612905 1000 . . gene_id "MSTRG.90981"; transcript_id "MSTRG.90981.1"; exon_number "1"; scaffold_462 StringTie exon 613177 613729 1000 - . gene_id "MSTRG.90982"; transcript_id "MSTRG.90982.1"; exon_number "1"; scaffold_462 StringTie exon 615092 615270 1000 - . gene_id "MSTRG.90982"; transcript_id "MSTRG.90982.1"; exon_number "2"; scaffold_462 StringTie exon 641675 641892 1000 . . gene_id "MSTRG.90986"; transcript_id "MSTRG.90986.1"; exon_number "1"; scaffold_462 StringTie exon 657799 657933 1000 + . gene_id "MSTRG.90989"; transcript_id "MSTRG.90989.1"; exon_number "1"; scaffold_462 StringTie exon 658024 658173 1000 + . gene_id "MSTRG.90989"; transcript_id "MSTRG.90989.1"; exon_number "2"; scaffold_462 StringTie exon 659366 659474 1000 + . gene_id "MSTRG.90989"; transcript_id "MSTRG.90989.1"; exon_number "3"; scaffold_462 StringTie exon 659718 659895 1000 + . gene_id "MSTRG.90989"; transcript_id "MSTRG.90989.1"; exon_number "4"; scaffold_462 StringTie exon 785609 785912 1000 . . gene_id "MSTRG.90998"; transcript_id "MSTRG.90998.1"; exon_number "1"; scaffold_4620 StringTie exon 29452 29843 1000 . . gene_id "MSTRG.91004"; transcript_id "MSTRG.91004.1"; exon_number "1"; scaffold_46212 StringTie exon 1 1348 1000 . . gene_id "MSTRG.91017"; transcript_id "MSTRG.91017.1"; exon_number "1"; scaffold_4622 StringTie exon 23 382 1000 . . gene_id "MSTRG.91019"; transcript_id "MSTRG.91019.1"; exon_number "1"; scaffold_46238 StringTie exon 1955 2387 1000 . . gene_id "MSTRG.91030"; transcript_id "MSTRG.91030.1"; exon_number "1"; scaffold_4626 StringTie exon 5969 5996 1000 + . gene_id "MSTRG.91046"; transcript_id "MSTRG.91046.1"; exon_number "1"; scaffold_4626 StringTie exon 6255 6457 1000 + . gene_id "MSTRG.91046"; transcript_id "MSTRG.91046.1"; exon_number "2"; scaffold_4626 StringTie exon 6725 6802 1000 + . gene_id "MSTRG.91046"; transcript_id "MSTRG.91046.1"; exon_number "3"; scaffold_4626 StringTie exon 7540 7659 1000 + . gene_id "MSTRG.91046"; transcript_id "MSTRG.91046.1"; exon_number "4"; scaffold_4626 StringTie exon 9396 9438 1000 + . gene_id "MSTRG.91046"; transcript_id "MSTRG.91046.1"; exon_number "5"; scaffold_4626 StringTie exon 44542 44764 1000 . . gene_id "MSTRG.91053"; transcript_id "MSTRG.91053.1"; exon_number "1"; scaffold_46263 StringTie exon 1802 2115 1000 . . gene_id "MSTRG.91055"; transcript_id "MSTRG.91055.1"; exon_number "1"; scaffold_4627 StringTie exon 43653 44597 1000 - . gene_id "MSTRG.91060"; transcript_id "MSTRG.91060.1"; exon_number "1"; scaffold_4629 StringTie exon 46607 46824 1000 . . gene_id "MSTRG.91076"; transcript_id "MSTRG.91076.1"; exon_number "1"; scaffold_463 StringTie exon 626496 626696 1000 . . gene_id "MSTRG.91148"; transcript_id "MSTRG.91148.1"; exon_number "1"; scaffold_463 StringTie exon 652126 652457 1000 + . gene_id "MSTRG.91152"; transcript_id "MSTRG.91152.1"; exon_number "1"; scaffold_463 StringTie exon 674292 674532 1000 - . gene_id "MSTRG.91155"; transcript_id "MSTRG.91155.1"; exon_number "1"; scaffold_463 StringTie exon 674724 674825 1000 - . gene_id "MSTRG.91155"; transcript_id "MSTRG.91155.1"; exon_number "2"; scaffold_463 StringTie exon 676762 676815 1000 - . gene_id "MSTRG.91155"; transcript_id "MSTRG.91155.1"; exon_number "3"; scaffold_463 StringTie exon 677015 677167 1000 - . gene_id "MSTRG.91155"; transcript_id "MSTRG.91155.1"; exon_number "4"; scaffold_463 StringTie exon 677514 677635 1000 - . gene_id "MSTRG.91155"; transcript_id "MSTRG.91155.1"; exon_number "5"; scaffold_4630 StringTie exon 14217 14441 1000 . . gene_id "MSTRG.91168"; transcript_id "MSTRG.91168.1"; exon_number "1"; scaffold_4631 StringTie exon 41952 42232 1000 . . gene_id "MSTRG.91175"; transcript_id "MSTRG.91175.1"; exon_number "1"; scaffold_46327 StringTie exon 2345 2918 1000 . . gene_id "MSTRG.91193"; transcript_id "MSTRG.91193.1"; exon_number "1"; scaffold_46335 StringTie exon 1281 1513 1000 . . gene_id "MSTRG.91200"; transcript_id "MSTRG.91200.1"; exon_number "1"; scaffold_4636 StringTie exon 46742 46942 1000 . . gene_id "MSTRG.91224"; transcript_id "MSTRG.91224.1"; exon_number "1"; scaffold_46379 StringTie exon 2620 2969 1000 . . gene_id "MSTRG.91239"; transcript_id "MSTRG.91239.1"; exon_number "1"; scaffold_46393 StringTie exon 855 1067 1000 . . gene_id "MSTRG.91249"; transcript_id "MSTRG.91249.1"; exon_number "1"; scaffold_464 StringTie exon 189081 189186 1000 + . gene_id "MSTRG.91262"; transcript_id "MSTRG.91262.1"; exon_number "1"; scaffold_464 StringTie exon 189298 189457 1000 + . gene_id "MSTRG.91262"; transcript_id "MSTRG.91262.1"; exon_number "2"; scaffold_464 StringTie exon 189565 189759 1000 + . gene_id "MSTRG.91262"; transcript_id "MSTRG.91262.1"; exon_number "3"; scaffold_464 StringTie exon 238298 238398 1000 - . gene_id "MSTRG.91269"; transcript_id "MSTRG.91269.1"; exon_number "1"; scaffold_464 StringTie exon 238483 238620 1000 - . gene_id "MSTRG.91269"; transcript_id "MSTRG.91269.1"; exon_number "2"; scaffold_464 StringTie exon 239152 239295 1000 - . gene_id "MSTRG.91269"; transcript_id "MSTRG.91269.1"; exon_number "3"; scaffold_464 StringTie exon 239636 239735 1000 + . gene_id "MSTRG.91270"; transcript_id "MSTRG.91270.1"; exon_number "1"; scaffold_464 StringTie exon 243126 243234 1000 + . gene_id "MSTRG.91270"; transcript_id "MSTRG.91270.1"; exon_number "2"; scaffold_464 StringTie exon 264074 264325 1000 + . gene_id "MSTRG.91272"; transcript_id "MSTRG.91272.1"; exon_number "1"; scaffold_464 StringTie exon 474792 475118 1000 . . gene_id "MSTRG.91283"; transcript_id "MSTRG.91283.1"; exon_number "1"; scaffold_46429 StringTie exon 211 412 1000 . . gene_id "MSTRG.91317"; transcript_id "MSTRG.91317.1"; exon_number "1"; scaffold_46437 StringTie exon 242 440 1000 - . gene_id "MSTRG.91325"; transcript_id "MSTRG.91325.1"; exon_number "1"; scaffold_46437 StringTie exon 2544 2610 1000 - . gene_id "MSTRG.91325"; transcript_id "MSTRG.91325.1"; exon_number "2"; scaffold_4647 StringTie exon 6495 6607 1000 + . gene_id "MSTRG.91344"; transcript_id "MSTRG.91344.1"; exon_number "1"; scaffold_4647 StringTie exon 6868 6988 1000 + . gene_id "MSTRG.91344"; transcript_id "MSTRG.91344.1"; exon_number "2"; scaffold_4647 StringTie exon 7125 7249 1000 + . gene_id "MSTRG.91344"; transcript_id "MSTRG.91344.1"; exon_number "3"; scaffold_4647 StringTie exon 7412 7692 1000 + . gene_id "MSTRG.91344"; transcript_id "MSTRG.91344.1"; exon_number "4"; scaffold_465 StringTie exon 211904 212278 1000 . . gene_id "MSTRG.91385"; transcript_id "MSTRG.91385.1"; exon_number "1"; scaffold_465 StringTie exon 368293 368518 1000 . . gene_id "MSTRG.91393"; transcript_id "MSTRG.91393.1"; exon_number "1"; scaffold_465 StringTie exon 445365 445615 1000 . . gene_id "MSTRG.91395"; transcript_id "MSTRG.91395.1"; exon_number "1"; scaffold_465 StringTie exon 518035 518156 1000 + . gene_id "MSTRG.91406"; transcript_id "MSTRG.91406.1"; exon_number "1"; scaffold_465 StringTie exon 519420 519591 1000 + . gene_id "MSTRG.91406"; transcript_id "MSTRG.91406.1"; exon_number "2"; scaffold_465 StringTie exon 519726 519786 1000 + . gene_id "MSTRG.91406"; transcript_id "MSTRG.91406.1"; exon_number "3"; scaffold_4650 StringTie exon 3728 5108 1000 . . gene_id "MSTRG.91428"; transcript_id "MSTRG.91428.1"; exon_number "1"; scaffold_46572 StringTie exon 1618 1700 1000 + . gene_id "MSTRG.91475"; transcript_id "MSTRG.91475.1"; exon_number "1"; scaffold_46572 StringTie exon 1727 1924 1000 + . gene_id "MSTRG.91475"; transcript_id "MSTRG.91475.1"; exon_number "2"; scaffold_4658 StringTie exon 36475 37043 1000 . . gene_id "MSTRG.91483"; transcript_id "MSTRG.91483.1"; exon_number "1"; scaffold_466 StringTie exon 174463 174681 1000 . . gene_id "MSTRG.91512"; transcript_id "MSTRG.91512.1"; exon_number "1"; scaffold_466 StringTie exon 349422 349658 1000 . . gene_id "MSTRG.91527"; transcript_id "MSTRG.91527.1"; exon_number "1"; scaffold_466 StringTie exon 363120 363388 1000 . . gene_id "MSTRG.91528"; transcript_id "MSTRG.91528.1"; exon_number "1"; scaffold_466 StringTie exon 604148 604406 1000 . . gene_id "MSTRG.91539"; transcript_id "MSTRG.91539.1"; exon_number "1"; scaffold_466 StringTie exon 606689 606964 1000 . . gene_id "MSTRG.91540"; transcript_id "MSTRG.91540.1"; exon_number "1"; scaffold_466 StringTie exon 660046 660110 1000 + . gene_id "MSTRG.91545"; transcript_id "MSTRG.91545.1"; exon_number "1"; scaffold_466 StringTie exon 662169 662303 1000 + . gene_id "MSTRG.91545"; transcript_id "MSTRG.91545.1"; exon_number "2"; scaffold_466 StringTie exon 662585 662613 1000 + . gene_id "MSTRG.91545"; transcript_id "MSTRG.91545.1"; exon_number "3"; scaffold_46619 StringTie exon 2516 2882 1000 . . gene_id "MSTRG.91572"; transcript_id "MSTRG.91572.1"; exon_number "1"; scaffold_4663 StringTie exon 30637 30856 1000 . . gene_id "MSTRG.91581"; transcript_id "MSTRG.91581.1"; exon_number "1"; scaffold_4664 StringTie exon 1256 1419 1000 - . gene_id "MSTRG.91585"; transcript_id "MSTRG.91585.2"; exon_number "1"; scaffold_4664 StringTie exon 1461 1841 1000 - . gene_id "MSTRG.91585"; transcript_id "MSTRG.91585.2"; exon_number "2"; scaffold_4664 StringTie exon 1890 1949 1000 - . gene_id "MSTRG.91585"; transcript_id "MSTRG.91585.2"; exon_number "3"; scaffold_4664 StringTie exon 1998 3153 1000 - . gene_id "MSTRG.91585"; transcript_id "MSTRG.91585.2"; exon_number "4"; scaffold_46655 StringTie exon 1733 1955 1000 . . gene_id "MSTRG.91599"; transcript_id "MSTRG.91599.1"; exon_number "1"; scaffold_4666 StringTie exon 12326 14922 1000 - . gene_id "MSTRG.91606"; transcript_id "MSTRG.91606.3"; exon_number "1"; scaffold_4666 StringTie exon 15071 15227 1000 - . gene_id "MSTRG.91606"; transcript_id "MSTRG.91606.3"; exon_number "2"; scaffold_4666 StringTie exon 16297 16760 1000 - . gene_id "MSTRG.91606"; transcript_id "MSTRG.91606.3"; exon_number "3"; scaffold_4666 StringTie exon 26494 26779 1000 - . gene_id "MSTRG.91606"; transcript_id "MSTRG.91606.3"; exon_number "4"; scaffold_46692 StringTie exon 2126 2443 1000 . . gene_id "MSTRG.91625"; transcript_id "MSTRG.91625.1"; exon_number "1"; scaffold_46699 StringTie exon 524 753 1000 . . gene_id "MSTRG.91629"; transcript_id "MSTRG.91629.1"; exon_number "1"; scaffold_467 StringTie exon 165167 165387 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.2"; exon_number "1"; scaffold_467 StringTie exon 165714 165839 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.2"; exon_number "2"; scaffold_467 StringTie exon 166508 166669 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.2"; exon_number "3"; scaffold_467 StringTie exon 166885 167041 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.2"; exon_number "4"; scaffold_467 StringTie exon 257188 257270 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.2"; exon_number "5"; scaffold_467 StringTie exon 257804 258041 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.2"; exon_number "6"; scaffold_467 StringTie exon 212170 212262 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.7"; exon_number "1"; scaffold_467 StringTie exon 212577 212702 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.7"; exon_number "2"; scaffold_467 StringTie exon 212836 212997 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.7"; exon_number "3"; scaffold_467 StringTie exon 256699 256855 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.7"; exon_number "4"; scaffold_467 StringTie exon 257188 257270 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.7"; exon_number "5"; scaffold_467 StringTie exon 257804 258041 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.7"; exon_number "6"; scaffold_467 StringTie exon 212170 212262 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.10"; exon_number "1"; scaffold_467 StringTie exon 212577 212702 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.10"; exon_number "2"; scaffold_467 StringTie exon 212836 212997 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.10"; exon_number "3"; scaffold_467 StringTie exon 256699 256855 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.10"; exon_number "4"; scaffold_467 StringTie exon 257188 257270 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.10"; exon_number "5"; scaffold_467 StringTie exon 267576 267813 1000 - . gene_id "MSTRG.91642"; transcript_id "MSTRG.91642.10"; exon_number "6"; scaffold_467 StringTie exon 442230 443438 1000 . . gene_id "MSTRG.91657"; transcript_id "MSTRG.91657.1"; exon_number "1"; scaffold_467 StringTie exon 683347 683443 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "1"; scaffold_467 StringTie exon 684368 684487 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "2"; scaffold_467 StringTie exon 684887 684982 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "3"; scaffold_467 StringTie exon 685066 685165 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "4"; scaffold_467 StringTie exon 685418 685601 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "5"; scaffold_467 StringTie exon 685980 686135 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "6"; scaffold_467 StringTie exon 686306 686539 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "7"; scaffold_467 StringTie exon 686776 687080 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "8"; scaffold_467 StringTie exon 687446 687594 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "9"; scaffold_467 StringTie exon 687865 687984 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "10"; scaffold_467 StringTie exon 688564 688659 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "11"; scaffold_467 StringTie exon 690805 690904 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "12"; scaffold_467 StringTie exon 691162 691200 1000 + . gene_id "MSTRG.91693"; transcript_id "MSTRG.91693.1"; exon_number "13"; scaffold_4670 StringTie exon 537 887 1000 . . gene_id "MSTRG.91701"; transcript_id "MSTRG.91701.1"; exon_number "1"; scaffold_46706 StringTie exon 3 1702 1000 . . gene_id "MSTRG.91707"; transcript_id "MSTRG.91707.1"; exon_number "1"; scaffold_4671 StringTie exon 2493 2546 1000 + . gene_id "MSTRG.91709"; transcript_id "MSTRG.91709.1"; exon_number "1"; scaffold_4671 StringTie exon 4571 4656 1000 + . gene_id "MSTRG.91709"; transcript_id "MSTRG.91709.1"; exon_number "2"; scaffold_4671 StringTie exon 4974 5190 1000 + . gene_id "MSTRG.91709"; transcript_id "MSTRG.91709.1"; exon_number "3"; scaffold_4671 StringTie exon 5378 5719 1000 + . gene_id "MSTRG.91709"; transcript_id "MSTRG.91709.1"; exon_number "4"; scaffold_4672 StringTie exon 47741 48136 1000 . . gene_id "MSTRG.91730"; transcript_id "MSTRG.91730.1"; exon_number "1"; scaffold_4677 StringTie exon 5856 6265 1000 . . gene_id "MSTRG.91755"; transcript_id "MSTRG.91755.1"; exon_number "1"; scaffold_46784 StringTie exon 2694 2909 1000 . . gene_id "MSTRG.91766"; transcript_id "MSTRG.91766.1"; exon_number "1"; scaffold_468 StringTie exon 51182 51244 1000 + . gene_id "MSTRG.91772"; transcript_id "MSTRG.91772.1"; exon_number "1"; scaffold_468 StringTie exon 51446 51527 1000 + . gene_id "MSTRG.91772"; transcript_id "MSTRG.91772.1"; exon_number "2"; scaffold_468 StringTie exon 51625 51768 1000 + . gene_id "MSTRG.91772"; transcript_id "MSTRG.91772.1"; exon_number "3"; scaffold_468 StringTie exon 142880 143072 1000 + . gene_id "MSTRG.91783"; transcript_id "MSTRG.91783.1"; exon_number "1"; scaffold_468 StringTie exon 149375 149544 1000 + . gene_id "MSTRG.91783"; transcript_id "MSTRG.91783.1"; exon_number "2"; scaffold_468 StringTie exon 150011 150206 1000 + . gene_id "MSTRG.91783"; transcript_id "MSTRG.91783.1"; exon_number "3"; scaffold_468 StringTie exon 151923 152046 1000 + . gene_id "MSTRG.91783"; transcript_id "MSTRG.91783.1"; exon_number "4"; scaffold_468 StringTie exon 152864 152995 1000 + . gene_id "MSTRG.91783"; transcript_id "MSTRG.91783.1"; exon_number "5"; scaffold_468 StringTie exon 153146 153240 1000 + . gene_id "MSTRG.91783"; transcript_id "MSTRG.91783.1"; exon_number "6"; scaffold_468 StringTie exon 154245 154468 1000 + . gene_id "MSTRG.91783"; transcript_id "MSTRG.91783.1"; exon_number "7"; scaffold_468 StringTie exon 155021 155232 1000 + . gene_id "MSTRG.91784"; transcript_id "MSTRG.91784.1"; exon_number "1"; scaffold_468 StringTie exon 157660 157895 1000 + . gene_id "MSTRG.91784"; transcript_id "MSTRG.91784.1"; exon_number "2"; scaffold_468 StringTie exon 158121 158318 1000 + . gene_id "MSTRG.91784"; transcript_id "MSTRG.91784.1"; exon_number "3"; scaffold_468 StringTie exon 158463 158607 1000 + . gene_id "MSTRG.91784"; transcript_id "MSTRG.91784.1"; exon_number "4"; scaffold_468 StringTie exon 158817 159101 1000 + . gene_id "MSTRG.91784"; transcript_id "MSTRG.91784.1"; exon_number "5"; scaffold_468 StringTie exon 424208 424247 1000 - . gene_id "MSTRG.91808"; transcript_id "MSTRG.91808.1"; exon_number "1"; scaffold_468 StringTie exon 424426 424519 1000 - . gene_id "MSTRG.91808"; transcript_id "MSTRG.91808.1"; exon_number "2"; scaffold_468 StringTie exon 424762 424842 1000 - . gene_id "MSTRG.91808"; transcript_id "MSTRG.91808.1"; exon_number "3"; scaffold_468 StringTie exon 485757 485846 1000 + . gene_id "MSTRG.91815"; transcript_id "MSTRG.91815.1"; exon_number "1"; scaffold_468 StringTie exon 486029 486162 1000 + . gene_id "MSTRG.91815"; transcript_id "MSTRG.91815.1"; exon_number "2"; scaffold_468 StringTie exon 486427 486486 1000 + . gene_id "MSTRG.91815"; transcript_id "MSTRG.91815.1"; exon_number "3"; scaffold_468 StringTie exon 486602 486653 1000 + . gene_id "MSTRG.91815"; transcript_id "MSTRG.91815.1"; exon_number "4"; scaffold_468 StringTie exon 489886 490319 1000 + . gene_id "MSTRG.91815"; transcript_id "MSTRG.91815.1"; exon_number "5"; scaffold_468 StringTie exon 637890 638266 1000 . . gene_id "MSTRG.91825"; transcript_id "MSTRG.91825.1"; exon_number "1"; scaffold_468 StringTie exon 679990 680103 1000 + . gene_id "MSTRG.91830"; transcript_id "MSTRG.91830.1"; exon_number "1"; scaffold_468 StringTie exon 680652 680860 1000 + . gene_id "MSTRG.91830"; transcript_id "MSTRG.91830.1"; exon_number "2"; scaffold_468 StringTie exon 680957 680992 1000 + . gene_id "MSTRG.91830"; transcript_id "MSTRG.91830.1"; exon_number "3"; scaffold_4680 StringTie exon 2565 3081 1000 . . gene_id "MSTRG.91841"; transcript_id "MSTRG.91841.1"; exon_number "1"; scaffold_4680 StringTie exon 5283 5733 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "1"; scaffold_4680 StringTie exon 22700 22796 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "2"; scaffold_4680 StringTie exon 24588 24709 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "3"; scaffold_4680 StringTie exon 28851 28980 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "4"; scaffold_4680 StringTie exon 29383 29462 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "5"; scaffold_4680 StringTie exon 30690 30853 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "6"; scaffold_4680 StringTie exon 34762 35062 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "7"; scaffold_4680 StringTie exon 43104 43133 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "8"; scaffold_4680 StringTie exon 43238 43296 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "9"; scaffold_4680 StringTie exon 44771 44837 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "10"; scaffold_4680 StringTie exon 47151 47201 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "11"; scaffold_4680 StringTie exon 47856 47913 1000 + . gene_id "MSTRG.91842"; transcript_id "MSTRG.91842.2"; exon_number "12"; scaffold_46819 StringTie exon 2110 2317 1000 . . gene_id "MSTRG.91852"; transcript_id "MSTRG.91852.1"; exon_number "1"; scaffold_4686 StringTie exon 28622 28991 1000 . . gene_id "MSTRG.91886"; transcript_id "MSTRG.91886.1"; exon_number "1"; scaffold_4686 StringTie exon 32780 32810 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "1"; scaffold_4686 StringTie exon 32927 33002 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "2"; scaffold_4686 StringTie exon 33287 33398 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "3"; scaffold_4686 StringTie exon 35335 35499 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "4"; scaffold_4686 StringTie exon 35768 35880 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "5"; scaffold_4686 StringTie exon 36149 36337 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "6"; scaffold_4686 StringTie exon 37062 37218 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "7"; scaffold_4686 StringTie exon 37344 37387 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "8"; scaffold_4686 StringTie exon 37782 37990 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "9"; scaffold_4686 StringTie exon 38709 38899 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "10"; scaffold_4686 StringTie exon 47976 48064 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "11"; scaffold_4686 StringTie exon 48707 48866 1000 - . gene_id "MSTRG.91887"; transcript_id "MSTRG.91887.1"; exon_number "12"; scaffold_46873 StringTie exon 1916 2049 1000 + . gene_id "MSTRG.91894"; transcript_id "MSTRG.91894.1"; exon_number "1"; scaffold_46873 StringTie exon 2119 2191 1000 + . gene_id "MSTRG.91894"; transcript_id "MSTRG.91894.1"; exon_number "2"; scaffold_4688 StringTie exon 4999 5059 1000 + . gene_id "MSTRG.91899"; transcript_id "MSTRG.91899.2"; exon_number "1"; scaffold_4688 StringTie exon 7972 8187 1000 + . gene_id "MSTRG.91899"; transcript_id "MSTRG.91899.2"; exon_number "2"; scaffold_4688 StringTie exon 11602 11703 1000 + . gene_id "MSTRG.91899"; transcript_id "MSTRG.91899.2"; exon_number "3"; scaffold_4688 StringTie exon 16574 16778 1000 + . gene_id "MSTRG.91899"; transcript_id "MSTRG.91899.2"; exon_number "4"; scaffold_4688 StringTie exon 23648 23777 1000 + . gene_id "MSTRG.91899"; transcript_id "MSTRG.91899.2"; exon_number "5"; scaffold_4688 StringTie exon 30485 31416 1000 . . gene_id "MSTRG.91902"; transcript_id "MSTRG.91902.1"; exon_number "1"; scaffold_469 StringTie exon 12274 12482 1000 - . gene_id "MSTRG.91918"; transcript_id "MSTRG.91918.1"; exon_number "1"; scaffold_469 StringTie exon 14722 14806 1000 - . gene_id "MSTRG.91918"; transcript_id "MSTRG.91918.1"; exon_number "2"; scaffold_469 StringTie exon 718214 718563 1000 - . gene_id "MSTRG.91961"; transcript_id "MSTRG.91961.1"; exon_number "1"; scaffold_469 StringTie exon 718749 718841 1000 - . gene_id "MSTRG.91961"; transcript_id "MSTRG.91961.1"; exon_number "2"; scaffold_4690 StringTie exon 29741 30045 1000 . . gene_id "MSTRG.91970"; transcript_id "MSTRG.91970.1"; exon_number "1"; scaffold_4691 StringTie exon 38883 39090 1000 . . gene_id "MSTRG.91975"; transcript_id "MSTRG.91975.1"; exon_number "1"; scaffold_4692 StringTie exon 271 383 1000 + . gene_id "MSTRG.91985"; transcript_id "MSTRG.91985.2"; exon_number "1"; scaffold_4692 StringTie exon 1371 1525 1000 + . gene_id "MSTRG.91985"; transcript_id "MSTRG.91985.2"; exon_number "2"; scaffold_4692 StringTie exon 3402 3419 1000 + . gene_id "MSTRG.91985"; transcript_id "MSTRG.91985.2"; exon_number "3"; scaffold_46925 StringTie exon 2004 2289 1000 . . gene_id "MSTRG.91996"; transcript_id "MSTRG.91996.1"; exon_number "1"; scaffold_4693 StringTie exon 48142 48382 1000 . . gene_id "MSTRG.92000"; transcript_id "MSTRG.92000.1"; exon_number "1"; scaffold_46963 StringTie exon 2475 2815 1000 . . gene_id "MSTRG.92018"; transcript_id "MSTRG.92018.1"; exon_number "1"; scaffold_46972 StringTie exon 247 446 1000 . . gene_id "MSTRG.92029"; transcript_id "MSTRG.92029.1"; exon_number "1"; scaffold_47 StringTie exon 56522 56858 1000 . . gene_id "MSTRG.92050"; transcript_id "MSTRG.92050.1"; exon_number "1"; scaffold_47 StringTie exon 681875 682232 1000 . . gene_id "MSTRG.92079"; transcript_id "MSTRG.92079.1"; exon_number "1"; scaffold_47 StringTie exon 770801 771614 1000 . . gene_id "MSTRG.92084"; transcript_id "MSTRG.92084.1"; exon_number "1"; scaffold_47 StringTie exon 1181277 1181323 1000 + . gene_id "MSTRG.92115"; transcript_id "MSTRG.92115.1"; exon_number "1"; scaffold_47 StringTie exon 1181639 1181743 1000 + . gene_id "MSTRG.92115"; transcript_id "MSTRG.92115.1"; exon_number "2"; scaffold_47 StringTie exon 1184191 1184260 1000 + . gene_id "MSTRG.92115"; transcript_id "MSTRG.92115.1"; exon_number "3"; scaffold_47 StringTie exon 1383605 1384037 1000 . . gene_id "MSTRG.92130"; transcript_id "MSTRG.92130.1"; exon_number "1"; scaffold_470 StringTie exon 52588 52831 1000 - . gene_id "MSTRG.92160"; transcript_id "MSTRG.92160.1"; exon_number "1"; scaffold_470 StringTie exon 53214 53346 1000 - . gene_id "MSTRG.92160"; transcript_id "MSTRG.92160.1"; exon_number "2"; scaffold_470 StringTie exon 55355 55500 1000 - . gene_id "MSTRG.92160"; transcript_id "MSTRG.92160.1"; exon_number "3"; scaffold_470 StringTie exon 55908 56057 1000 - . gene_id "MSTRG.92160"; transcript_id "MSTRG.92160.1"; exon_number "4"; scaffold_470 StringTie exon 56223 56359 1000 - . gene_id "MSTRG.92160"; transcript_id "MSTRG.92160.1"; exon_number "5"; scaffold_470 StringTie exon 56545 56573 1000 - . gene_id "MSTRG.92160"; transcript_id "MSTRG.92160.1"; exon_number "6"; scaffold_470 StringTie exon 167966 169060 1000 - . gene_id "MSTRG.92170"; transcript_id "MSTRG.92170.1"; exon_number "1"; scaffold_470 StringTie exon 469327 469363 1000 - . gene_id "MSTRG.92185"; transcript_id "MSTRG.92185.1"; exon_number "1"; scaffold_470 StringTie exon 475221 475408 1000 - . gene_id "MSTRG.92185"; transcript_id "MSTRG.92185.1"; exon_number "2"; scaffold_470 StringTie exon 482471 482535 1000 - . gene_id "MSTRG.92186"; transcript_id "MSTRG.92186.1"; exon_number "1"; scaffold_470 StringTie exon 482584 482731 1000 - . gene_id "MSTRG.92186"; transcript_id "MSTRG.92186.1"; exon_number "2"; scaffold_470 StringTie exon 560971 561416 1000 . . gene_id "MSTRG.92191"; transcript_id "MSTRG.92191.1"; exon_number "1"; scaffold_47003 StringTie exon 701 1419 1000 . . gene_id "MSTRG.92202"; transcript_id "MSTRG.92202.1"; exon_number "1"; scaffold_4701 StringTie exon 13173 13391 1000 . . gene_id "MSTRG.92209"; transcript_id "MSTRG.92209.1"; exon_number "1"; scaffold_47042 StringTie exon 3 240 1000 . . gene_id "MSTRG.92233"; transcript_id "MSTRG.92233.1"; exon_number "1"; scaffold_47053 StringTie exon 208 446 1000 - . gene_id "MSTRG.92242"; transcript_id "MSTRG.92242.1"; exon_number "1"; scaffold_47053 StringTie exon 807 932 1000 - . gene_id "MSTRG.92242"; transcript_id "MSTRG.92242.1"; exon_number "2"; scaffold_47053 StringTie exon 1057 1221 1000 - . gene_id "MSTRG.92242"; transcript_id "MSTRG.92242.1"; exon_number "3"; scaffold_47053 StringTie exon 1593 1749 1000 - . gene_id "MSTRG.92242"; transcript_id "MSTRG.92242.1"; exon_number "4"; scaffold_47053 StringTie exon 2445 2613 1000 - . gene_id "MSTRG.92242"; transcript_id "MSTRG.92242.1"; exon_number "5"; scaffold_47055 StringTie exon 932 1277 1000 . . gene_id "MSTRG.92244"; transcript_id "MSTRG.92244.1"; exon_number "1"; scaffold_4706 StringTie exon 34473 34770 1000 . . gene_id "MSTRG.92246"; transcript_id "MSTRG.92246.1"; exon_number "1"; scaffold_47065 StringTie exon 520 751 1000 . . gene_id "MSTRG.92250"; transcript_id "MSTRG.92250.1"; exon_number "1"; scaffold_47084 StringTie exon 1344 1559 1000 . . gene_id "MSTRG.92256"; transcript_id "MSTRG.92256.1"; exon_number "1"; scaffold_471 StringTie exon 82590 82807 1000 . . gene_id "MSTRG.92268"; transcript_id "MSTRG.92268.1"; exon_number "1"; scaffold_471 StringTie exon 322969 323278 1000 . . gene_id "MSTRG.92282"; transcript_id "MSTRG.92282.1"; exon_number "1"; scaffold_471 StringTie exon 378164 378496 1000 . . gene_id "MSTRG.92287"; transcript_id "MSTRG.92287.1"; exon_number "1"; scaffold_4712 StringTie exon 6586 6921 1000 . . gene_id "MSTRG.92317"; transcript_id "MSTRG.92317.1"; exon_number "1"; scaffold_4712 StringTie exon 45966 46215 1000 . . gene_id "MSTRG.92322"; transcript_id "MSTRG.92322.1"; exon_number "1"; scaffold_47135 StringTie exon 2118 2530 1000 . . gene_id "MSTRG.92330"; transcript_id "MSTRG.92330.1"; exon_number "1"; scaffold_4715 StringTie exon 9796 10265 1000 . . gene_id "MSTRG.92335"; transcript_id "MSTRG.92335.1"; exon_number "1"; scaffold_4718 StringTie exon 1894 2314 1000 . . gene_id "MSTRG.92353"; transcript_id "MSTRG.92353.1"; exon_number "1"; scaffold_4718 StringTie exon 4540 4768 1000 . . gene_id "MSTRG.92354"; transcript_id "MSTRG.92354.1"; exon_number "1"; scaffold_4719 StringTie exon 2573 2776 1000 . . gene_id "MSTRG.92367"; transcript_id "MSTRG.92367.1"; exon_number "1"; scaffold_472 StringTie exon 60326 60993 1000 . . gene_id "MSTRG.92379"; transcript_id "MSTRG.92379.1"; exon_number "1"; scaffold_472 StringTie exon 472693 473319 1000 . . gene_id "MSTRG.92420"; transcript_id "MSTRG.92420.1"; exon_number "1"; scaffold_472 StringTie exon 518781 519012 1000 . . gene_id "MSTRG.92425"; transcript_id "MSTRG.92425.1"; exon_number "1"; scaffold_4720 StringTie exon 24853 26002 1000 . . gene_id "MSTRG.92445"; transcript_id "MSTRG.92445.1"; exon_number "1"; scaffold_4725 StringTie exon 45495 45719 1000 - . gene_id "MSTRG.92484"; transcript_id "MSTRG.92484.1"; exon_number "1"; scaffold_4726 StringTie exon 36688 36922 1000 . . gene_id "MSTRG.92491"; transcript_id "MSTRG.92491.1"; exon_number "1"; scaffold_473 StringTie exon 80101 80336 1000 . . gene_id "MSTRG.92517"; transcript_id "MSTRG.92517.1"; exon_number "1"; scaffold_473 StringTie exon 539990 540670 1000 . . gene_id "MSTRG.92531"; transcript_id "MSTRG.92531.1"; exon_number "1"; scaffold_473 StringTie exon 743088 743184 1000 + . gene_id "MSTRG.92549"; transcript_id "MSTRG.92549.1"; exon_number "1"; scaffold_473 StringTie exon 743434 743716 1000 + . gene_id "MSTRG.92549"; transcript_id "MSTRG.92549.1"; exon_number "2"; scaffold_47304 StringTie exon 2360 2716 1000 . . gene_id "MSTRG.92554"; transcript_id "MSTRG.92554.1"; exon_number "1"; scaffold_47315 StringTie exon 2108 2314 1000 . . gene_id "MSTRG.92560"; transcript_id "MSTRG.92560.1"; exon_number "1"; scaffold_4737 StringTie exon 36826 37048 1000 . . gene_id "MSTRG.92598"; transcript_id "MSTRG.92598.1"; exon_number "1"; scaffold_47393 StringTie exon 267 2150 1000 . . gene_id "MSTRG.92612"; transcript_id "MSTRG.92612.1"; exon_number "1"; scaffold_474 StringTie exon 125813 126018 1000 . . gene_id "MSTRG.92620"; transcript_id "MSTRG.92620.1"; exon_number "1"; scaffold_474 StringTie exon 225494 225987 1000 . . gene_id "MSTRG.92630"; transcript_id "MSTRG.92630.1"; exon_number "1"; scaffold_474 StringTie exon 639446 640373 1000 . . gene_id "MSTRG.92646"; transcript_id "MSTRG.92646.1"; exon_number "1"; scaffold_47419 StringTie exon 528 837 1000 . . gene_id "MSTRG.92670"; transcript_id "MSTRG.92670.1"; exon_number "1"; scaffold_4743 StringTie exon 4955 5159 1000 . . gene_id "MSTRG.92680"; transcript_id "MSTRG.92680.1"; exon_number "1"; scaffold_4743 StringTie exon 13204 13595 1000 . . gene_id "MSTRG.92682"; transcript_id "MSTRG.92682.1"; exon_number "1"; scaffold_4749 StringTie exon 9406 9634 1000 . . gene_id "MSTRG.92726"; transcript_id "MSTRG.92726.1"; exon_number "1"; scaffold_475 StringTie exon 233971 234210 1000 . . gene_id "MSTRG.92750"; transcript_id "MSTRG.92750.1"; exon_number "1"; scaffold_475 StringTie exon 367780 368718 1000 . . gene_id "MSTRG.92759"; transcript_id "MSTRG.92759.1"; exon_number "1"; scaffold_475 StringTie exon 437809 438111 1000 . . gene_id "MSTRG.92768"; transcript_id "MSTRG.92768.1"; exon_number "1"; scaffold_4750 StringTie exon 20538 20785 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "1"; scaffold_4750 StringTie exon 21299 21376 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "2"; scaffold_4750 StringTie exon 22005 22078 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "3"; scaffold_4750 StringTie exon 23417 23468 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "4"; scaffold_4750 StringTie exon 23667 23699 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "5"; scaffold_4750 StringTie exon 23946 24121 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "6"; scaffold_4750 StringTie exon 24722 24821 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "7"; scaffold_4750 StringTie exon 25545 25646 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "8"; scaffold_4750 StringTie exon 25957 26021 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "9"; scaffold_4750 StringTie exon 26949 27063 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "10"; scaffold_4750 StringTie exon 37643 37848 1000 - . gene_id "MSTRG.92790"; transcript_id "MSTRG.92790.1"; exon_number "11"; scaffold_4751 StringTie exon 46199 46439 1000 . . gene_id "MSTRG.92797"; transcript_id "MSTRG.92797.1"; exon_number "1"; scaffold_47548 StringTie exon 245 535 1000 . . gene_id "MSTRG.92822"; transcript_id "MSTRG.92822.1"; exon_number "1"; scaffold_4755 StringTie exon 42201 42469 1000 . . gene_id "MSTRG.92827"; transcript_id "MSTRG.92827.1"; exon_number "1"; scaffold_47560 StringTie exon 2363 2849 1000 . . gene_id "MSTRG.92834"; transcript_id "MSTRG.92834.1"; exon_number "1"; scaffold_476 StringTie exon 120274 120568 1000 . . gene_id "MSTRG.92864"; transcript_id "MSTRG.92864.1"; exon_number "1"; scaffold_476 StringTie exon 179371 179580 1000 . . gene_id "MSTRG.92875"; transcript_id "MSTRG.92875.1"; exon_number "1"; scaffold_476 StringTie exon 343287 345299 1000 . . gene_id "MSTRG.92887"; transcript_id "MSTRG.92887.1"; exon_number "1"; scaffold_476 StringTie exon 360056 360437 1000 . . gene_id "MSTRG.92889"; transcript_id "MSTRG.92889.1"; exon_number "1"; scaffold_476 StringTie exon 410525 410742 1000 . . gene_id "MSTRG.92892"; transcript_id "MSTRG.92892.1"; exon_number "1"; scaffold_476 StringTie exon 453808 454122 1000 . . gene_id "MSTRG.92895"; transcript_id "MSTRG.92895.1"; exon_number "1"; scaffold_47621 StringTie exon 1509 1773 1000 . . gene_id "MSTRG.92944"; transcript_id "MSTRG.92944.1"; exon_number "1"; scaffold_4763 StringTie exon 9176 9463 1000 . . gene_id "MSTRG.92947"; transcript_id "MSTRG.92947.1"; exon_number "1"; scaffold_47637 StringTie exon 7 963 1000 + . gene_id "MSTRG.92958"; transcript_id "MSTRG.92958.1"; exon_number "1"; scaffold_4764 StringTie exon 18928 19144 1000 . . gene_id "MSTRG.92961"; transcript_id "MSTRG.92961.1"; exon_number "1"; scaffold_477 StringTie exon 3006 3248 1000 . . gene_id "MSTRG.93012"; transcript_id "MSTRG.93012.1"; exon_number "1"; scaffold_477 StringTie exon 315260 315493 1000 . . gene_id "MSTRG.93040"; transcript_id "MSTRG.93040.1"; exon_number "1"; scaffold_477 StringTie exon 339148 339420 1000 . . gene_id "MSTRG.93044"; transcript_id "MSTRG.93044.1"; exon_number "1"; scaffold_477 StringTie exon 454834 455133 1000 . . gene_id "MSTRG.93055"; transcript_id "MSTRG.93055.1"; exon_number "1"; scaffold_4773 StringTie exon 28991 29052 1000 - . gene_id "MSTRG.93102"; transcript_id "MSTRG.93102.1"; exon_number "1"; scaffold_4773 StringTie exon 37916 38168 1000 - . gene_id "MSTRG.93102"; transcript_id "MSTRG.93102.1"; exon_number "2"; scaffold_47730 StringTie exon 1895 2137 1000 . . gene_id "MSTRG.93104"; transcript_id "MSTRG.93104.1"; exon_number "1"; scaffold_47761 StringTie exon 1267 1504 1000 . . gene_id "MSTRG.93121"; transcript_id "MSTRG.93121.1"; exon_number "1"; scaffold_47765 StringTie exon 2581 2905 1000 . . gene_id "MSTRG.93125"; transcript_id "MSTRG.93125.1"; exon_number "1"; scaffold_47799 StringTie exon 2620 2821 1000 . . gene_id "MSTRG.93135"; transcript_id "MSTRG.93135.1"; exon_number "1"; scaffold_478 StringTie exon 99764 100001 1000 . . gene_id "MSTRG.93147"; transcript_id "MSTRG.93147.1"; exon_number "1"; scaffold_478 StringTie exon 403676 403886 1000 - . gene_id "MSTRG.93167"; transcript_id "MSTRG.93167.1"; exon_number "1"; scaffold_478 StringTie exon 404074 404140 1000 - . gene_id "MSTRG.93167"; transcript_id "MSTRG.93167.1"; exon_number "2"; scaffold_478 StringTie exon 502900 503204 1000 . . gene_id "MSTRG.93179"; transcript_id "MSTRG.93179.1"; exon_number "1"; scaffold_478 StringTie exon 698225 698261 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "1"; scaffold_478 StringTie exon 699135 699221 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "2"; scaffold_478 StringTie exon 701147 701227 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "3"; scaffold_478 StringTie exon 701629 701706 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "4"; scaffold_478 StringTie exon 710762 710848 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "5"; scaffold_478 StringTie exon 718723 718803 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "6"; scaffold_478 StringTie exon 719205 719282 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "7"; scaffold_478 StringTie exon 719780 719884 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "8"; scaffold_478 StringTie exon 720069 720137 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.2"; exon_number "9"; scaffold_478 StringTie exon 709877 709909 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.6"; exon_number "1"; scaffold_478 StringTie exon 710762 710848 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.6"; exon_number "2"; scaffold_478 StringTie exon 718723 718803 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.6"; exon_number "3"; scaffold_478 StringTie exon 719205 719282 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.6"; exon_number "4"; scaffold_478 StringTie exon 719780 719884 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.6"; exon_number "5"; scaffold_478 StringTie exon 720069 720115 1000 + . gene_id "MSTRG.93195"; transcript_id "MSTRG.93195.6"; exon_number "6"; scaffold_4780 StringTie exon 22734 23282 1000 . . gene_id "MSTRG.93203"; transcript_id "MSTRG.93203.1"; exon_number "1"; scaffold_4780 StringTie exon 40158 40485 1000 . . gene_id "MSTRG.93206"; transcript_id "MSTRG.93206.1"; exon_number "1"; scaffold_4781 StringTie exon 33444 33829 1000 . . gene_id "MSTRG.93211"; transcript_id "MSTRG.93211.1"; exon_number "1"; scaffold_4784 StringTie exon 31491 31847 1000 . . gene_id "MSTRG.93236"; transcript_id "MSTRG.93236.1"; exon_number "1"; scaffold_47896 StringTie exon 1339 1706 1000 . . gene_id "MSTRG.93264"; transcript_id "MSTRG.93264.1"; exon_number "1"; scaffold_479 StringTie exon 113253 113468 1000 . . gene_id "MSTRG.93275"; transcript_id "MSTRG.93275.1"; exon_number "1"; scaffold_479 StringTie exon 272855 272997 1000 - . gene_id "MSTRG.93286"; transcript_id "MSTRG.93286.1"; exon_number "1"; scaffold_479 StringTie exon 274837 274931 1000 - . gene_id "MSTRG.93286"; transcript_id "MSTRG.93286.1"; exon_number "2"; scaffold_479 StringTie exon 501221 501486 1000 . . gene_id "MSTRG.93301"; transcript_id "MSTRG.93301.1"; exon_number "1"; scaffold_47909 StringTie exon 1855 2103 1000 . . gene_id "MSTRG.93325"; transcript_id "MSTRG.93325.1"; exon_number "1"; scaffold_47934 StringTie exon 994 1074 1000 - . gene_id "MSTRG.93339"; transcript_id "MSTRG.93339.1"; exon_number "1"; scaffold_47934 StringTie exon 1188 1306 1000 - . gene_id "MSTRG.93339"; transcript_id "MSTRG.93339.1"; exon_number "2"; scaffold_4794 StringTie exon 32632 32857 1000 + . gene_id "MSTRG.93346"; transcript_id "MSTRG.93346.1"; exon_number "1"; scaffold_4794 StringTie exon 41117 41172 1000 + . gene_id "MSTRG.93346"; transcript_id "MSTRG.93346.1"; exon_number "2"; scaffold_4794 StringTie exon 41709 41819 1000 + . gene_id "MSTRG.93346"; transcript_id "MSTRG.93346.1"; exon_number "3"; scaffold_4794 StringTie exon 42037 42345 1000 + . gene_id "MSTRG.93346"; transcript_id "MSTRG.93346.1"; exon_number "4"; scaffold_4794 StringTie exon 43006 43030 1000 + . gene_id "MSTRG.93346"; transcript_id "MSTRG.93346.1"; exon_number "5"; scaffold_4795 StringTie exon 1416 1536 1000 + . gene_id "MSTRG.93352"; transcript_id "MSTRG.93352.1"; exon_number "1"; scaffold_4795 StringTie exon 1749 1903 1000 + . gene_id "MSTRG.93352"; transcript_id "MSTRG.93352.1"; exon_number "2"; scaffold_4795 StringTie exon 2433 2718 1000 + . gene_id "MSTRG.93352"; transcript_id "MSTRG.93352.1"; exon_number "3"; scaffold_4795 StringTie exon 4354 4532 1000 + . gene_id "MSTRG.93352"; transcript_id "MSTRG.93352.1"; exon_number "4"; scaffold_4795 StringTie exon 12514 12629 1000 + . gene_id "MSTRG.93352"; transcript_id "MSTRG.93352.1"; exon_number "5"; scaffold_4796 StringTie exon 23646 23887 1000 . . gene_id "MSTRG.93363"; transcript_id "MSTRG.93363.1"; exon_number "1"; scaffold_4797 StringTie exon 43806 44217 1000 . . gene_id "MSTRG.93369"; transcript_id "MSTRG.93369.1"; exon_number "1"; scaffold_48 StringTie exon 28325 28334 1000 + . gene_id "MSTRG.93376"; transcript_id "MSTRG.93376.1"; exon_number "1"; scaffold_48 StringTie exon 91950 92144 1000 + . gene_id "MSTRG.93376"; transcript_id "MSTRG.93376.1"; exon_number "2"; scaffold_48 StringTie exon 92445 92616 1000 + . gene_id "MSTRG.93376"; transcript_id "MSTRG.93376.1"; exon_number "3"; scaffold_48 StringTie exon 92775 92877 1000 + . gene_id "MSTRG.93376"; transcript_id "MSTRG.93376.1"; exon_number "4"; scaffold_48 StringTie exon 92987 93605 1000 + . gene_id "MSTRG.93376"; transcript_id "MSTRG.93376.1"; exon_number "5"; scaffold_48 StringTie exon 413023 413263 1000 . . gene_id "MSTRG.93404"; transcript_id "MSTRG.93404.1"; exon_number "1"; scaffold_48 StringTie exon 492195 492558 1000 . . gene_id "MSTRG.93407"; transcript_id "MSTRG.93407.1"; exon_number "1"; scaffold_48 StringTie exon 500007 500263 1000 . . gene_id "MSTRG.93409"; transcript_id "MSTRG.93409.1"; exon_number "1"; scaffold_48 StringTie exon 514851 515083 1000 . . gene_id "MSTRG.93410"; transcript_id "MSTRG.93410.1"; exon_number "1"; scaffold_48 StringTie exon 1194822 1195140 1000 . . gene_id "MSTRG.93433"; transcript_id "MSTRG.93433.1"; exon_number "1"; scaffold_48 StringTie exon 1443883 1444234 1000 . . gene_id "MSTRG.93450"; transcript_id "MSTRG.93450.1"; exon_number "1"; scaffold_48 StringTie exon 1546795 1547156 1000 . . gene_id "MSTRG.93460"; transcript_id "MSTRG.93460.1"; exon_number "1"; scaffold_48 StringTie exon 1590948 1591258 1000 . . gene_id "MSTRG.93464"; transcript_id "MSTRG.93464.1"; exon_number "1"; scaffold_48 StringTie exon 1766367 1766651 1000 . . gene_id "MSTRG.93477"; transcript_id "MSTRG.93477.1"; exon_number "1"; scaffold_48 StringTie exon 1822103 1822194 1000 - . gene_id "MSTRG.93485"; transcript_id "MSTRG.93485.1"; exon_number "1"; scaffold_48 StringTie exon 1823773 1823918 1000 - . gene_id "MSTRG.93485"; transcript_id "MSTRG.93485.1"; exon_number "2"; scaffold_48 StringTie exon 1827147 1827177 1000 - . gene_id "MSTRG.93485"; transcript_id "MSTRG.93485.1"; exon_number "3"; scaffold_48 StringTie exon 1828463 1828634 1000 - . gene_id "MSTRG.93485"; transcript_id "MSTRG.93485.1"; exon_number "4"; scaffold_48 StringTie exon 1898296 1899345 1000 . . gene_id "MSTRG.93491"; transcript_id "MSTRG.93491.1"; exon_number "1"; scaffold_48 StringTie exon 2124431 2124612 1000 - . gene_id "MSTRG.93516"; transcript_id "MSTRG.93516.1"; exon_number "1"; scaffold_48 StringTie exon 2124848 2124872 1000 - . gene_id "MSTRG.93516"; transcript_id "MSTRG.93516.1"; exon_number "2"; scaffold_480 StringTie exon 318991 319002 1000 + . gene_id "MSTRG.93539"; transcript_id "MSTRG.93539.1"; exon_number "1"; scaffold_480 StringTie exon 343047 344284 1000 + . gene_id "MSTRG.93539"; transcript_id "MSTRG.93539.1"; exon_number "2"; scaffold_480 StringTie exon 727002 727812 1000 . . gene_id "MSTRG.93581"; transcript_id "MSTRG.93581.1"; exon_number "1"; scaffold_48002 StringTie exon 1299 1322 1000 + . gene_id "MSTRG.93589"; transcript_id "MSTRG.93589.1"; exon_number "1"; scaffold_48002 StringTie exon 1642 1864 1000 + . gene_id "MSTRG.93589"; transcript_id "MSTRG.93589.1"; exon_number "2"; scaffold_48002 StringTie exon 1962 2110 1000 + . gene_id "MSTRG.93589"; transcript_id "MSTRG.93589.1"; exon_number "3"; scaffold_48002 StringTie exon 2800 2875 1000 + . gene_id "MSTRG.93589"; transcript_id "MSTRG.93589.1"; exon_number "4"; scaffold_48055 StringTie exon 2579 2858 1000 . . gene_id "MSTRG.93620"; transcript_id "MSTRG.93620.1"; exon_number "1"; scaffold_48080 StringTie exon 872 1077 1000 + . gene_id "MSTRG.93638"; transcript_id "MSTRG.93638.1"; exon_number "1"; scaffold_48080 StringTie exon 1487 1614 1000 + . gene_id "MSTRG.93638"; transcript_id "MSTRG.93638.1"; exon_number "2"; scaffold_48080 StringTie exon 1782 1902 1000 + . gene_id "MSTRG.93638"; transcript_id "MSTRG.93638.1"; exon_number "3"; scaffold_48080 StringTie exon 2026 2101 1000 + . gene_id "MSTRG.93638"; transcript_id "MSTRG.93638.1"; exon_number "4"; scaffold_48080 StringTie exon 2473 2545 1000 + . gene_id "MSTRG.93638"; transcript_id "MSTRG.93638.1"; exon_number "5"; scaffold_481 StringTie exon 166743 166949 1000 . . gene_id "MSTRG.93651"; transcript_id "MSTRG.93651.1"; exon_number "1"; scaffold_481 StringTie exon 483488 483710 1000 . . gene_id "MSTRG.93661"; transcript_id "MSTRG.93661.1"; exon_number "1"; scaffold_481 StringTie exon 758948 759094 1000 - . gene_id "MSTRG.93683"; transcript_id "MSTRG.93683.1"; exon_number "1"; scaffold_481 StringTie exon 759951 760011 1000 - . gene_id "MSTRG.93683"; transcript_id "MSTRG.93683.1"; exon_number "2"; scaffold_4810 StringTie exon 10943 12405 1000 . . gene_id "MSTRG.93686"; transcript_id "MSTRG.93686.1"; exon_number "1"; scaffold_4813 StringTie exon 36444 36663 1000 . . gene_id "MSTRG.93714"; transcript_id "MSTRG.93714.1"; exon_number "1"; scaffold_48131 StringTie exon 2451 2715 1000 . . gene_id "MSTRG.93715"; transcript_id "MSTRG.93715.1"; exon_number "1"; scaffold_48144 StringTie exon 498 688 1000 - . gene_id "MSTRG.93725"; transcript_id "MSTRG.93725.1"; exon_number "1"; scaffold_48144 StringTie exon 991 1142 1000 - . gene_id "MSTRG.93725"; transcript_id "MSTRG.93725.1"; exon_number "2"; scaffold_48152 StringTie exon 448 806 1000 . . gene_id "MSTRG.93737"; transcript_id "MSTRG.93737.1"; exon_number "1"; scaffold_48192 StringTie exon 884 1258 1000 . . gene_id "MSTRG.93761"; transcript_id "MSTRG.93761.1"; exon_number "1"; scaffold_482 StringTie exon 389032 389317 1000 - . gene_id "MSTRG.93795"; transcript_id "MSTRG.93795.1"; exon_number "1"; scaffold_482 StringTie exon 389487 389540 1000 - . gene_id "MSTRG.93795"; transcript_id "MSTRG.93795.1"; exon_number "2"; scaffold_482 StringTie exon 389714 389783 1000 - . gene_id "MSTRG.93795"; transcript_id "MSTRG.93795.1"; exon_number "3"; scaffold_482 StringTie exon 585279 585521 1000 . . gene_id "MSTRG.93807"; transcript_id "MSTRG.93807.1"; exon_number "1"; scaffold_4820 StringTie exon 36838 37153 1000 . . gene_id "MSTRG.93817"; transcript_id "MSTRG.93817.1"; exon_number "1"; scaffold_48225 StringTie exon 2122 2358 1000 . . gene_id "MSTRG.93831"; transcript_id "MSTRG.93831.1"; exon_number "1"; scaffold_483 StringTie exon 642598 642703 1000 - . gene_id "MSTRG.93929"; transcript_id "MSTRG.93929.1"; exon_number "1"; scaffold_483 StringTie exon 645368 645450 1000 - . gene_id "MSTRG.93929"; transcript_id "MSTRG.93929.1"; exon_number "2"; scaffold_483 StringTie exon 645553 645570 1000 - . gene_id "MSTRG.93929"; transcript_id "MSTRG.93929.1"; exon_number "3"; scaffold_483 StringTie exon 646552 647007 1000 - . gene_id "MSTRG.93929"; transcript_id "MSTRG.93929.1"; exon_number "4"; scaffold_48328 StringTie exon 566 732 1000 + . gene_id "MSTRG.93959"; transcript_id "MSTRG.93959.1"; exon_number "1"; scaffold_48328 StringTie exon 1331 1446 1000 + . gene_id "MSTRG.93959"; transcript_id "MSTRG.93959.1"; exon_number "2"; scaffold_48328 StringTie exon 1975 2245 1000 + . gene_id "MSTRG.93959"; transcript_id "MSTRG.93959.1"; exon_number "3"; scaffold_48329 StringTie exon 307 514 1000 . . gene_id "MSTRG.93960"; transcript_id "MSTRG.93960.1"; exon_number "1"; scaffold_48348 StringTie exon 837 1037 1000 + . gene_id "MSTRG.93976"; transcript_id "MSTRG.93976.1"; exon_number "1"; scaffold_48348 StringTie exon 1636 1683 1000 + . gene_id "MSTRG.93976"; transcript_id "MSTRG.93976.1"; exon_number "2"; scaffold_48348 StringTie exon 2750 2875 1000 + . gene_id "MSTRG.93976"; transcript_id "MSTRG.93976.1"; exon_number "3"; scaffold_4837 StringTie exon 29372 29700 1000 . . gene_id "MSTRG.93989"; transcript_id "MSTRG.93989.1"; exon_number "1"; scaffold_4837 StringTie exon 43828 44058 1000 . . gene_id "MSTRG.93990"; transcript_id "MSTRG.93990.1"; exon_number "1"; scaffold_4838 StringTie exon 28160 28359 1000 . . gene_id "MSTRG.93994"; transcript_id "MSTRG.93994.1"; exon_number "1"; scaffold_484 StringTie exon 239546 239755 1000 . . gene_id "MSTRG.94013"; transcript_id "MSTRG.94013.1"; exon_number "1"; scaffold_484 StringTie exon 389632 390245 1000 + . gene_id "MSTRG.94022"; transcript_id "MSTRG.94022.2"; exon_number "1"; scaffold_484 StringTie exon 425440 425526 1000 + . gene_id "MSTRG.94022"; transcript_id "MSTRG.94022.2"; exon_number "2"; scaffold_484 StringTie exon 438355 438372 1000 + . gene_id "MSTRG.94022"; transcript_id "MSTRG.94022.2"; exon_number "3"; scaffold_484 StringTie exon 438642 438710 1000 + . gene_id "MSTRG.94022"; transcript_id "MSTRG.94022.2"; exon_number "4"; scaffold_484 StringTie exon 439785 439829 1000 + . gene_id "MSTRG.94022"; transcript_id "MSTRG.94022.2"; exon_number "5"; scaffold_484 StringTie exon 441944 441994 1000 + . gene_id "MSTRG.94022"; transcript_id "MSTRG.94022.2"; exon_number "6"; scaffold_484 StringTie exon 442293 442328 1000 + . gene_id "MSTRG.94022"; transcript_id "MSTRG.94022.2"; exon_number "7"; scaffold_484 StringTie exon 451709 451781 1000 + . gene_id "MSTRG.94022"; transcript_id "MSTRG.94022.2"; exon_number "8"; scaffold_4840 StringTie exon 27166 27579 1000 . . gene_id "MSTRG.94048"; transcript_id "MSTRG.94048.1"; exon_number "1"; scaffold_48404 StringTie exon 89 371 1000 . . gene_id "MSTRG.94052"; transcript_id "MSTRG.94052.1"; exon_number "1"; scaffold_48407 StringTie exon 1993 2286 1000 . . gene_id "MSTRG.94054"; transcript_id "MSTRG.94054.1"; exon_number "1"; scaffold_48428 StringTie exon 1614 1813 1000 . . gene_id "MSTRG.94068"; transcript_id "MSTRG.94068.1"; exon_number "1"; scaffold_4843 StringTie exon 484 770 1000 . . gene_id "MSTRG.94069"; transcript_id "MSTRG.94069.1"; exon_number "1"; scaffold_48440 StringTie exon 6 189 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "1"; scaffold_48440 StringTie exon 445 617 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "2"; scaffold_48440 StringTie exon 797 973 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "3"; scaffold_48440 StringTie exon 1276 1472 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "4"; scaffold_48440 StringTie exon 1571 1694 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "5"; scaffold_48440 StringTie exon 1885 1976 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "6"; scaffold_48440 StringTie exon 2045 2189 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "7"; scaffold_48440 StringTie exon 2460 2544 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "8"; scaffold_48440 StringTie exon 2623 2765 1000 - . gene_id "MSTRG.94076"; transcript_id "MSTRG.94076.1"; exon_number "9"; scaffold_4849 StringTie exon 26581 26804 1000 . . gene_id "MSTRG.94109"; transcript_id "MSTRG.94109.1"; exon_number "1"; scaffold_485 StringTie exon 350354 350584 1000 . . gene_id "MSTRG.94141"; transcript_id "MSTRG.94141.1"; exon_number "1"; scaffold_48514 StringTie exon 3 568 1000 . . gene_id "MSTRG.94174"; transcript_id "MSTRG.94174.1"; exon_number "1"; scaffold_4852 StringTie exon 32848 33061 1000 . . gene_id "MSTRG.94179"; transcript_id "MSTRG.94179.1"; exon_number "1"; scaffold_4852 StringTie exon 46826 47078 1000 . . gene_id "MSTRG.94180"; transcript_id "MSTRG.94180.1"; exon_number "1"; scaffold_4856 StringTie exon 22886 23124 1000 - . gene_id "MSTRG.94204"; transcript_id "MSTRG.94204.1"; exon_number "1"; scaffold_4856 StringTie exon 28782 28882 1000 - . gene_id "MSTRG.94204"; transcript_id "MSTRG.94204.1"; exon_number "2"; scaffold_4856 StringTie exon 29124 29224 1000 - . gene_id "MSTRG.94204"; transcript_id "MSTRG.94204.1"; exon_number "3"; scaffold_4856 StringTie exon 29570 29696 1000 - . gene_id "MSTRG.94204"; transcript_id "MSTRG.94204.1"; exon_number "4"; scaffold_4856 StringTie exon 31265 31352 1000 - . gene_id "MSTRG.94204"; transcript_id "MSTRG.94204.1"; exon_number "5"; scaffold_4856 StringTie exon 47051 47253 1000 . . gene_id "MSTRG.94208"; transcript_id "MSTRG.94208.1"; exon_number "1"; scaffold_486 StringTie exon 19711 19990 1000 . . gene_id "MSTRG.94238"; transcript_id "MSTRG.94238.1"; exon_number "1"; scaffold_486 StringTie exon 684005 684166 1000 + . gene_id "MSTRG.94271"; transcript_id "MSTRG.94271.1"; exon_number "1"; scaffold_486 StringTie exon 684320 684426 1000 + . gene_id "MSTRG.94271"; transcript_id "MSTRG.94271.1"; exon_number "2"; scaffold_486 StringTie exon 690718 690831 1000 + . gene_id "MSTRG.94271"; transcript_id "MSTRG.94271.1"; exon_number "3"; scaffold_486 StringTie exon 693452 693860 1000 + . gene_id "MSTRG.94271"; transcript_id "MSTRG.94271.1"; exon_number "4"; scaffold_486 StringTie exon 728616 728649 1000 + . gene_id "MSTRG.94272"; transcript_id "MSTRG.94272.1"; exon_number "1"; scaffold_486 StringTie exon 729344 729578 1000 + . gene_id "MSTRG.94272"; transcript_id "MSTRG.94272.1"; exon_number "2"; scaffold_48605 StringTie exon 405 513 1000 + . gene_id "MSTRG.94280"; transcript_id "MSTRG.94280.1"; exon_number "1"; scaffold_48605 StringTie exon 1103 1199 1000 + . gene_id "MSTRG.94280"; transcript_id "MSTRG.94280.1"; exon_number "2"; scaffold_48609 StringTie exon 1985 2104 1000 + . gene_id "MSTRG.94283"; transcript_id "MSTRG.94283.1"; exon_number "1"; scaffold_48609 StringTie exon 2173 2355 1000 + . gene_id "MSTRG.94283"; transcript_id "MSTRG.94283.1"; exon_number "2"; scaffold_4865 StringTie exon 369 665 1000 . . gene_id "MSTRG.94311"; transcript_id "MSTRG.94311.1"; exon_number "1"; scaffold_4866 StringTie exon 30086 30530 1000 . . gene_id "MSTRG.94321"; transcript_id "MSTRG.94321.1"; exon_number "1"; scaffold_48663 StringTie exon 1641 1953 1000 . . gene_id "MSTRG.94327"; transcript_id "MSTRG.94327.1"; exon_number "1"; scaffold_48683 StringTie exon 1536 1848 1000 . . gene_id "MSTRG.94339"; transcript_id "MSTRG.94339.1"; exon_number "1"; scaffold_4869 StringTie exon 25340 25640 1000 . . gene_id "MSTRG.94345"; transcript_id "MSTRG.94345.1"; exon_number "1"; scaffold_48699 StringTie exon 1931 2238 1000 . . gene_id "MSTRG.94351"; transcript_id "MSTRG.94351.1"; exon_number "1"; scaffold_487 StringTie exon 64115 64204 1000 - . gene_id "MSTRG.94354"; transcript_id "MSTRG.94354.1"; exon_number "1"; scaffold_487 StringTie exon 64363 64554 1000 - . gene_id "MSTRG.94354"; transcript_id "MSTRG.94354.1"; exon_number "2"; scaffold_487 StringTie exon 65414 65427 1000 - . gene_id "MSTRG.94354"; transcript_id "MSTRG.94354.1"; exon_number "3"; scaffold_4871 StringTie exon 19835 19914 1000 + . gene_id "MSTRG.94417"; transcript_id "MSTRG.94417.1"; exon_number "1"; scaffold_4871 StringTie exon 20014 20340 1000 + . gene_id "MSTRG.94417"; transcript_id "MSTRG.94417.1"; exon_number "2"; scaffold_48713 StringTie exon 1786 2208 1000 . . gene_id "MSTRG.94419"; transcript_id "MSTRG.94419.1"; exon_number "1"; scaffold_4872 StringTie exon 42705 42995 1000 . . gene_id "MSTRG.94424"; transcript_id "MSTRG.94424.1"; exon_number "1"; scaffold_48721 StringTie exon 2274 2616 1000 . . gene_id "MSTRG.94425"; transcript_id "MSTRG.94425.1"; exon_number "1"; scaffold_4874 StringTie exon 21802 22058 1000 . . gene_id "MSTRG.94439"; transcript_id "MSTRG.94439.1"; exon_number "1"; scaffold_4879 StringTie exon 21583 22122 1000 . . gene_id "MSTRG.94464"; transcript_id "MSTRG.94464.1"; exon_number "1"; scaffold_48790 StringTie exon 1734 1935 1000 . . gene_id "MSTRG.94470"; transcript_id "MSTRG.94470.1"; exon_number "1"; scaffold_488 StringTie exon 273045 273335 1000 . . gene_id "MSTRG.94488"; transcript_id "MSTRG.94488.1"; exon_number "1"; scaffold_488 StringTie exon 392982 393084 1000 + . gene_id "MSTRG.94494"; transcript_id "MSTRG.94494.1"; exon_number "1"; scaffold_488 StringTie exon 393730 393793 1000 + . gene_id "MSTRG.94494"; transcript_id "MSTRG.94494.1"; exon_number "2"; scaffold_488 StringTie exon 393987 394018 1000 + . gene_id "MSTRG.94494"; transcript_id "MSTRG.94494.1"; exon_number "3"; scaffold_488 StringTie exon 394378 394455 1000 + . gene_id "MSTRG.94494"; transcript_id "MSTRG.94494.1"; exon_number "4"; scaffold_488 StringTie exon 394568 394673 1000 + . gene_id "MSTRG.94494"; transcript_id "MSTRG.94494.1"; exon_number "5"; scaffold_488 StringTie exon 394877 394970 1000 + . gene_id "MSTRG.94494"; transcript_id "MSTRG.94494.1"; exon_number "6"; scaffold_488 StringTie exon 395321 395690 1000 + . gene_id "MSTRG.94494"; transcript_id "MSTRG.94494.1"; exon_number "7"; scaffold_488 StringTie exon 472529 472592 1000 + . gene_id "MSTRG.94499"; transcript_id "MSTRG.94499.1"; exon_number "1"; scaffold_488 StringTie exon 472993 473164 1000 + . gene_id "MSTRG.94499"; transcript_id "MSTRG.94499.1"; exon_number "2"; scaffold_488 StringTie exon 473282 473306 1000 + . gene_id "MSTRG.94499"; transcript_id "MSTRG.94499.1"; exon_number "3"; scaffold_488 StringTie exon 691111 691318 1000 . . gene_id "MSTRG.94519"; transcript_id "MSTRG.94519.1"; exon_number "1"; scaffold_48868 StringTie exon 521 783 1000 . . gene_id "MSTRG.94553"; transcript_id "MSTRG.94553.1"; exon_number "1"; scaffold_48881 StringTie exon 7 311 1000 . . gene_id "MSTRG.94561"; transcript_id "MSTRG.94561.1"; exon_number "1"; scaffold_489 StringTie exon 18006 18250 1000 . . gene_id "MSTRG.94567"; transcript_id "MSTRG.94567.1"; exon_number "1"; scaffold_489 StringTie exon 82593 82928 1000 . . gene_id "MSTRG.94574"; transcript_id "MSTRG.94574.1"; exon_number "1"; scaffold_489 StringTie exon 165994 166321 1000 . . gene_id "MSTRG.94583"; transcript_id "MSTRG.94583.1"; exon_number "1"; scaffold_4894 StringTie exon 58 433 1000 . . gene_id "MSTRG.94644"; transcript_id "MSTRG.94644.1"; exon_number "1"; scaffold_48940 StringTie exon 397 631 1000 . . gene_id "MSTRG.94648"; transcript_id "MSTRG.94648.1"; exon_number "1"; scaffold_48990 StringTie exon 895 1445 1000 . . gene_id "MSTRG.94671"; transcript_id "MSTRG.94671.1"; exon_number "1"; scaffold_49 StringTie exon 405241 405598 1000 . . gene_id "MSTRG.94714"; transcript_id "MSTRG.94714.1"; exon_number "1"; scaffold_49 StringTie exon 465281 465596 1000 . . gene_id "MSTRG.94717"; transcript_id "MSTRG.94717.1"; exon_number "1"; scaffold_49 StringTie exon 704115 704154 1000 - . gene_id "MSTRG.94750"; transcript_id "MSTRG.94750.1"; exon_number "1"; scaffold_49 StringTie exon 704541 704752 1000 - . gene_id "MSTRG.94750"; transcript_id "MSTRG.94750.1"; exon_number "2"; scaffold_49 StringTie exon 717135 717413 1000 - . gene_id "MSTRG.94750"; transcript_id "MSTRG.94750.1"; exon_number "3"; scaffold_49 StringTie exon 796348 797341 1000 - . gene_id "MSTRG.94757"; transcript_id "MSTRG.94757.1"; exon_number "1"; scaffold_49 StringTie exon 798925 799037 1000 - . gene_id "MSTRG.94757"; transcript_id "MSTRG.94757.1"; exon_number "2"; scaffold_49 StringTie exon 799449 799483 1000 - . gene_id "MSTRG.94757"; transcript_id "MSTRG.94757.1"; exon_number "3"; scaffold_49 StringTie exon 799812 799914 1000 - . gene_id "MSTRG.94757"; transcript_id "MSTRG.94757.1"; exon_number "4"; scaffold_49 StringTie exon 902543 902703 1000 + . gene_id "MSTRG.94765"; transcript_id "MSTRG.94765.1"; exon_number "1"; scaffold_49 StringTie exon 906481 906633 1000 + . gene_id "MSTRG.94765"; transcript_id "MSTRG.94765.1"; exon_number "2"; scaffold_49 StringTie exon 906916 906991 1000 + . gene_id "MSTRG.94765"; transcript_id "MSTRG.94765.1"; exon_number "3"; scaffold_49 StringTie exon 1043797 1044105 1000 . . gene_id "MSTRG.94772"; transcript_id "MSTRG.94772.1"; exon_number "1"; scaffold_49 StringTie exon 1286696 1286885 1000 + . gene_id "MSTRG.94807"; transcript_id "MSTRG.94807.1"; exon_number "1"; scaffold_49 StringTie exon 1287275 1287320 1000 + . gene_id "MSTRG.94807"; transcript_id "MSTRG.94807.1"; exon_number "2"; scaffold_49 StringTie exon 1816901 1817857 1000 . . gene_id "MSTRG.94858"; transcript_id "MSTRG.94858.1"; exon_number "1"; scaffold_49 StringTie exon 1961420 1961626 1000 - . gene_id "MSTRG.94873"; transcript_id "MSTRG.94873.1"; exon_number "1"; scaffold_49 StringTie exon 2012381 2012584 1000 . . gene_id "MSTRG.94878"; transcript_id "MSTRG.94878.1"; exon_number "1"; scaffold_490 StringTie exon 104812 105046 1000 . . gene_id "MSTRG.94899"; transcript_id "MSTRG.94899.1"; exon_number "1"; scaffold_490 StringTie exon 455374 455685 1000 . . gene_id "MSTRG.94914"; transcript_id "MSTRG.94914.1"; exon_number "1"; scaffold_4900 StringTie exon 39410 39819 1000 . . gene_id "MSTRG.94931"; transcript_id "MSTRG.94931.1"; exon_number "1"; scaffold_49027 StringTie exon 2362 2590 1000 . . gene_id "MSTRG.94948"; transcript_id "MSTRG.94948.1"; exon_number "1"; scaffold_4906 StringTie exon 11791 12086 1000 . . gene_id "MSTRG.94970"; transcript_id "MSTRG.94970.1"; exon_number "1"; scaffold_49061 StringTie exon 19 224 1000 . . gene_id "MSTRG.94971"; transcript_id "MSTRG.94971.1"; exon_number "1"; scaffold_49099 StringTie exon 2459 2681 1000 . . gene_id "MSTRG.94992"; transcript_id "MSTRG.94992.1"; exon_number "1"; scaffold_491 StringTie exon 103665 103895 1000 . . gene_id "MSTRG.94998"; transcript_id "MSTRG.94998.1"; exon_number "1"; scaffold_491 StringTie exon 311708 312091 1000 . . gene_id "MSTRG.95012"; transcript_id "MSTRG.95012.1"; exon_number "1"; scaffold_491 StringTie exon 314150 314546 1000 . . gene_id "MSTRG.95013"; transcript_id "MSTRG.95013.1"; exon_number "1"; scaffold_491 StringTie exon 334414 335161 1000 . . gene_id "MSTRG.95015"; transcript_id "MSTRG.95015.1"; exon_number "1"; scaffold_491 StringTie exon 630100 630314 1000 . . gene_id "MSTRG.95032"; transcript_id "MSTRG.95032.1"; exon_number "1"; scaffold_4910 StringTie exon 22491 22704 1000 . . gene_id "MSTRG.95037"; transcript_id "MSTRG.95037.1"; exon_number "1"; scaffold_4911 StringTie exon 9190 9544 1000 . . gene_id "MSTRG.95043"; transcript_id "MSTRG.95043.1"; exon_number "1"; scaffold_49112 StringTie exon 2612 2845 1000 . . gene_id "MSTRG.95049"; transcript_id "MSTRG.95049.1"; exon_number "1"; scaffold_49113 StringTie exon 1263 1468 1000 . . gene_id "MSTRG.95050"; transcript_id "MSTRG.95050.1"; exon_number "1"; scaffold_49120 StringTie exon 1750 2195 1000 . . gene_id "MSTRG.95056"; transcript_id "MSTRG.95056.1"; exon_number "1"; scaffold_49141 StringTie exon 1001 1626 1000 . . gene_id "MSTRG.95068"; transcript_id "MSTRG.95068.1"; exon_number "1"; scaffold_49171 StringTie exon 2203 2458 1000 . . gene_id "MSTRG.95088"; transcript_id "MSTRG.95088.1"; exon_number "1"; scaffold_49180 StringTie exon 557 820 1000 . . gene_id "MSTRG.95095"; transcript_id "MSTRG.95095.1"; exon_number "1"; scaffold_492 StringTie exon 426453 426751 1000 . . gene_id "MSTRG.95127"; transcript_id "MSTRG.95127.1"; exon_number "1"; scaffold_492 StringTie exon 437974 438108 1000 + . gene_id "MSTRG.95128"; transcript_id "MSTRG.95128.1"; exon_number "1"; scaffold_492 StringTie exon 438244 438373 1000 + . gene_id "MSTRG.95128"; transcript_id "MSTRG.95128.1"; exon_number "2"; scaffold_492 StringTie exon 438716 438813 1000 + . gene_id "MSTRG.95128"; transcript_id "MSTRG.95128.1"; exon_number "3"; scaffold_492 StringTie exon 439000 439288 1000 + . gene_id "MSTRG.95128"; transcript_id "MSTRG.95128.1"; exon_number "4"; scaffold_492 StringTie exon 716188 716407 1000 . . gene_id "MSTRG.95146"; transcript_id "MSTRG.95146.1"; exon_number "1"; scaffold_492 StringTie exon 717213 717651 1000 . . gene_id "MSTRG.95147"; transcript_id "MSTRG.95147.1"; exon_number "1"; scaffold_4922 StringTie exon 45204 45413 1000 . . gene_id "MSTRG.95166"; transcript_id "MSTRG.95166.1"; exon_number "1"; scaffold_49228 StringTie exon 141 350 1000 . . gene_id "MSTRG.95170"; transcript_id "MSTRG.95170.1"; exon_number "1"; scaffold_49230 StringTie exon 618 853 1000 . . gene_id "MSTRG.95174"; transcript_id "MSTRG.95174.1"; exon_number "1"; scaffold_49236 StringTie exon 894 1201 1000 . . gene_id "MSTRG.95176"; transcript_id "MSTRG.95176.1"; exon_number "1"; scaffold_49246 StringTie exon 2454 2732 1000 . . gene_id "MSTRG.95180"; transcript_id "MSTRG.95180.1"; exon_number "1"; scaffold_49248 StringTie exon 673 1050 1000 . . gene_id "MSTRG.95181"; transcript_id "MSTRG.95181.1"; exon_number "1"; scaffold_49267 StringTie exon 2561 2811 1000 . . gene_id "MSTRG.95190"; transcript_id "MSTRG.95190.1"; exon_number "1"; scaffold_493 StringTie exon 47590 47676 1000 - . gene_id "MSTRG.95208"; transcript_id "MSTRG.95208.1"; exon_number "1"; scaffold_493 StringTie exon 47819 47908 1000 - . gene_id "MSTRG.95208"; transcript_id "MSTRG.95208.1"; exon_number "2"; scaffold_493 StringTie exon 48249 48354 1000 - . gene_id "MSTRG.95208"; transcript_id "MSTRG.95208.1"; exon_number "3"; scaffold_493 StringTie exon 48636 48708 1000 - . gene_id "MSTRG.95208"; transcript_id "MSTRG.95208.1"; exon_number "4"; scaffold_493 StringTie exon 48867 48962 1000 - . gene_id "MSTRG.95208"; transcript_id "MSTRG.95208.1"; exon_number "5"; scaffold_493 StringTie exon 52527 52623 1000 - . gene_id "MSTRG.95208"; transcript_id "MSTRG.95208.1"; exon_number "6"; scaffold_493 StringTie exon 52792 52898 1000 - . gene_id "MSTRG.95208"; transcript_id "MSTRG.95208.1"; exon_number "7"; scaffold_493 StringTie exon 52980 53113 1000 - . gene_id "MSTRG.95208"; transcript_id "MSTRG.95208.1"; exon_number "8"; scaffold_493 StringTie exon 245652 245661 1000 + . gene_id "MSTRG.95223"; transcript_id "MSTRG.95223.1"; exon_number "1"; scaffold_493 StringTie exon 245807 245922 1000 + . gene_id "MSTRG.95223"; transcript_id "MSTRG.95223.1"; exon_number "2"; scaffold_493 StringTie exon 246074 246164 1000 + . gene_id "MSTRG.95223"; transcript_id "MSTRG.95223.1"; exon_number "3"; scaffold_493 StringTie exon 246257 246373 1000 + . gene_id "MSTRG.95223"; transcript_id "MSTRG.95223.1"; exon_number "4"; scaffold_493 StringTie exon 246963 247050 1000 + . gene_id "MSTRG.95223"; transcript_id "MSTRG.95223.1"; exon_number "5"; scaffold_493 StringTie exon 247233 247247 1000 + . gene_id "MSTRG.95223"; transcript_id "MSTRG.95223.1"; exon_number "6"; scaffold_493 StringTie exon 261122 261464 1000 + . gene_id "MSTRG.95226"; transcript_id "MSTRG.95226.1"; exon_number "1"; scaffold_493 StringTie exon 262785 265050 1000 + . gene_id "MSTRG.95226"; transcript_id "MSTRG.95226.1"; exon_number "2"; scaffold_493 StringTie exon 393554 393835 1000 . . gene_id "MSTRG.95234"; transcript_id "MSTRG.95234.1"; exon_number "1"; scaffold_493 StringTie exon 504100 504740 1000 . . gene_id "MSTRG.95250"; transcript_id "MSTRG.95250.1"; exon_number "1"; scaffold_493 StringTie exon 554695 555530 1000 - . gene_id "MSTRG.95253"; transcript_id "MSTRG.95253.1"; exon_number "1"; scaffold_493 StringTie exon 555742 555885 1000 - . gene_id "MSTRG.95253"; transcript_id "MSTRG.95253.1"; exon_number "2"; scaffold_493 StringTie exon 561635 561670 1000 - . gene_id "MSTRG.95253"; transcript_id "MSTRG.95253.1"; exon_number "3"; scaffold_493 StringTie exon 661738 661965 1000 . . gene_id "MSTRG.95260"; transcript_id "MSTRG.95260.1"; exon_number "1"; scaffold_4931 StringTie exon 29004 29261 1000 + . gene_id "MSTRG.95272"; transcript_id "MSTRG.95272.1"; exon_number "1"; scaffold_4931 StringTie exon 37029 37069 1000 + . gene_id "MSTRG.95272"; transcript_id "MSTRG.95272.1"; exon_number "2"; scaffold_49317 StringTie exon 2471 2795 1000 . . gene_id "MSTRG.95275"; transcript_id "MSTRG.95275.1"; exon_number "1"; scaffold_49346 StringTie exon 1431 1645 1000 . . gene_id "MSTRG.95295"; transcript_id "MSTRG.95295.1"; exon_number "1"; scaffold_49347 StringTie exon 192 524 1000 + . gene_id "MSTRG.95296"; transcript_id "MSTRG.95296.1"; exon_number "1"; scaffold_49347 StringTie exon 714 2141 1000 + . gene_id "MSTRG.95296"; transcript_id "MSTRG.95296.1"; exon_number "2"; scaffold_4936 StringTie exon 27487 27907 1000 . . gene_id "MSTRG.95302"; transcript_id "MSTRG.95302.1"; exon_number "1"; scaffold_49374 StringTie exon 1137 1883 1000 . . gene_id "MSTRG.95312"; transcript_id "MSTRG.95312.1"; exon_number "1"; scaffold_4938 StringTie exon 38459 38748 1000 . . gene_id "MSTRG.95318"; transcript_id "MSTRG.95318.1"; exon_number "1"; scaffold_494 StringTie exon 43570 44465 1000 - . gene_id "MSTRG.95336"; transcript_id "MSTRG.95336.1"; exon_number "1"; scaffold_494 StringTie exon 44543 44604 1000 - . gene_id "MSTRG.95336"; transcript_id "MSTRG.95336.1"; exon_number "2"; scaffold_494 StringTie exon 44743 44878 1000 - . gene_id "MSTRG.95336"; transcript_id "MSTRG.95336.1"; exon_number "3"; scaffold_494 StringTie exon 44971 45070 1000 - . gene_id "MSTRG.95336"; transcript_id "MSTRG.95336.1"; exon_number "4"; scaffold_494 StringTie exon 45166 45277 1000 - . gene_id "MSTRG.95336"; transcript_id "MSTRG.95336.1"; exon_number "5"; scaffold_494 StringTie exon 45438 45604 1000 - . gene_id "MSTRG.95336"; transcript_id "MSTRG.95336.1"; exon_number "6"; scaffold_494 StringTie exon 45767 45838 1000 - . gene_id "MSTRG.95336"; transcript_id "MSTRG.95336.1"; exon_number "7"; scaffold_494 StringTie exon 48780 48889 1000 - . gene_id "MSTRG.95336"; transcript_id "MSTRG.95336.1"; exon_number "8"; scaffold_494 StringTie exon 149283 149418 1000 - . gene_id "MSTRG.95344"; transcript_id "MSTRG.95344.2"; exon_number "1"; scaffold_494 StringTie exon 149956 150149 1000 - . gene_id "MSTRG.95344"; transcript_id "MSTRG.95344.2"; exon_number "2"; scaffold_494 StringTie exon 619975 621687 1000 - . gene_id "MSTRG.95377"; transcript_id "MSTRG.95377.1"; exon_number "1"; scaffold_494 StringTie exon 732090 732738 1000 . . gene_id "MSTRG.95387"; transcript_id "MSTRG.95387.1"; exon_number "1"; scaffold_494 StringTie exon 733682 733987 1000 . . gene_id "MSTRG.95388"; transcript_id "MSTRG.95388.1"; exon_number "1"; scaffold_4941 StringTie exon 39963 40178 1000 + . gene_id "MSTRG.95397"; transcript_id "MSTRG.95397.1"; exon_number "1"; scaffold_4941 StringTie exon 40638 40693 1000 + . gene_id "MSTRG.95397"; transcript_id "MSTRG.95397.1"; exon_number "2"; scaffold_4941 StringTie exon 40862 40949 1000 + . gene_id "MSTRG.95397"; transcript_id "MSTRG.95397.1"; exon_number "3"; scaffold_4941 StringTie exon 41399 42370 1000 + . gene_id "MSTRG.95397"; transcript_id "MSTRG.95397.1"; exon_number "4"; scaffold_49425 StringTie exon 247 797 1000 . . gene_id "MSTRG.95409"; transcript_id "MSTRG.95409.1"; exon_number "1"; scaffold_4945 StringTie exon 45521 46210 1000 . . gene_id "MSTRG.95421"; transcript_id "MSTRG.95421.1"; exon_number "1"; scaffold_4947 StringTie exon 24801 25090 1000 . . gene_id "MSTRG.95433"; transcript_id "MSTRG.95433.1"; exon_number "1"; scaffold_495 StringTie exon 137809 138166 1000 . . gene_id "MSTRG.95455"; transcript_id "MSTRG.95455.1"; exon_number "1"; scaffold_495 StringTie exon 281841 282092 1000 + . gene_id "MSTRG.95461"; transcript_id "MSTRG.95461.1"; exon_number "1"; scaffold_495 StringTie exon 285717 285897 1000 + . gene_id "MSTRG.95461"; transcript_id "MSTRG.95461.1"; exon_number "2"; scaffold_495 StringTie exon 286173 286257 1000 + . gene_id "MSTRG.95461"; transcript_id "MSTRG.95461.1"; exon_number "3"; scaffold_495 StringTie exon 660508 660807 1000 . . gene_id "MSTRG.95485"; transcript_id "MSTRG.95485.1"; exon_number "1"; scaffold_4951 StringTie exon 35054 36291 1000 . . gene_id "MSTRG.95495"; transcript_id "MSTRG.95495.1"; exon_number "1"; scaffold_49519 StringTie exon 3 274 1000 . . gene_id "MSTRG.95499"; transcript_id "MSTRG.95499.1"; exon_number "1"; scaffold_4955 StringTie exon 11058 11279 1000 . . gene_id "MSTRG.95518"; transcript_id "MSTRG.95518.1"; exon_number "1"; scaffold_49565 StringTie exon 2468 2816 1000 . . gene_id "MSTRG.95528"; transcript_id "MSTRG.95528.1"; exon_number "1"; scaffold_49571 StringTie exon 202 378 1000 + . gene_id "MSTRG.95531"; transcript_id "MSTRG.95531.1"; exon_number "1"; scaffold_49571 StringTie exon 439 584 1000 + . gene_id "MSTRG.95531"; transcript_id "MSTRG.95531.1"; exon_number "2"; scaffold_4958 StringTie exon 37854 38106 1000 . . gene_id "MSTRG.95536"; transcript_id "MSTRG.95536.1"; exon_number "1"; scaffold_49596 StringTie exon 4 341 1000 . . gene_id "MSTRG.95549"; transcript_id "MSTRG.95549.1"; exon_number "1"; scaffold_496 StringTie exon 576692 576859 1000 + . gene_id "MSTRG.95582"; transcript_id "MSTRG.95582.1"; exon_number "1"; scaffold_496 StringTie exon 657163 657258 1000 + . gene_id "MSTRG.95582"; transcript_id "MSTRG.95582.1"; exon_number "2"; scaffold_49600 StringTie exon 843 929 1000 + . gene_id "MSTRG.95602"; transcript_id "MSTRG.95602.1"; exon_number "1"; scaffold_49600 StringTie exon 1373 1467 1000 + . gene_id "MSTRG.95602"; transcript_id "MSTRG.95602.1"; exon_number "2"; scaffold_49600 StringTie exon 1717 1808 1000 + . gene_id "MSTRG.95602"; transcript_id "MSTRG.95602.1"; exon_number "3"; scaffold_49600 StringTie exon 2000 2098 1000 + . gene_id "MSTRG.95602"; transcript_id "MSTRG.95602.1"; exon_number "4"; scaffold_49600 StringTie exon 2193 2261 1000 + . gene_id "MSTRG.95602"; transcript_id "MSTRG.95602.1"; exon_number "5"; scaffold_49602 StringTie exon 23 366 1000 + . gene_id "MSTRG.95603"; transcript_id "MSTRG.95603.1"; exon_number "1"; scaffold_4961 StringTie exon 5673 6195 1000 . . gene_id "MSTRG.95608"; transcript_id "MSTRG.95608.1"; exon_number "1"; scaffold_4961 StringTie exon 39692 39982 1000 . . gene_id "MSTRG.95609"; transcript_id "MSTRG.95609.1"; exon_number "1"; scaffold_49612 StringTie exon 1124 1403 1000 . . gene_id "MSTRG.95612"; transcript_id "MSTRG.95612.1"; exon_number "1"; scaffold_4965 StringTie exon 25568 25793 1000 . . gene_id "MSTRG.95639"; transcript_id "MSTRG.95639.1"; exon_number "1"; scaffold_4970 StringTie exon 22906 23110 1000 . . gene_id "MSTRG.95693"; transcript_id "MSTRG.95693.1"; exon_number "1"; scaffold_4972 StringTie exon 34156 39173 1000 . . gene_id "MSTRG.95708"; transcript_id "MSTRG.95708.1"; exon_number "1"; scaffold_4974 StringTie exon 29995 32074 1000 . . gene_id "MSTRG.95730"; transcript_id "MSTRG.95730.1"; exon_number "1"; scaffold_4978 StringTie exon 10772 11077 1000 . . gene_id "MSTRG.95751"; transcript_id "MSTRG.95751.1"; exon_number "1"; scaffold_498 StringTie exon 92829 92925 1000 - . gene_id "MSTRG.95769"; transcript_id "MSTRG.95769.1"; exon_number "1"; scaffold_498 StringTie exon 93042 93153 1000 - . gene_id "MSTRG.95769"; transcript_id "MSTRG.95769.1"; exon_number "2"; scaffold_498 StringTie exon 93254 93302 1000 - . gene_id "MSTRG.95769"; transcript_id "MSTRG.95769.1"; exon_number "3"; scaffold_498 StringTie exon 319962 320164 1000 . . gene_id "MSTRG.95793"; transcript_id "MSTRG.95793.1"; exon_number "1"; scaffold_4981 StringTie exon 16457 16854 1000 . . gene_id "MSTRG.95842"; transcript_id "MSTRG.95842.1"; exon_number "1"; scaffold_49863 StringTie exon 419 1060 1000 - . gene_id "MSTRG.95871"; transcript_id "MSTRG.95871.1"; exon_number "1"; scaffold_49863 StringTie exon 1193 1269 1000 - . gene_id "MSTRG.95871"; transcript_id "MSTRG.95871.1"; exon_number "2"; scaffold_499 StringTie exon 212532 212839 1000 . . gene_id "MSTRG.95908"; transcript_id "MSTRG.95908.1"; exon_number "1"; scaffold_499 StringTie exon 611383 611729 1000 . . gene_id "MSTRG.95934"; transcript_id "MSTRG.95934.1"; exon_number "1"; scaffold_499 StringTie exon 611991 612896 1000 . . gene_id "MSTRG.95935"; transcript_id "MSTRG.95935.1"; exon_number "1"; scaffold_499 StringTie exon 615689 615725 1000 - . gene_id "MSTRG.95937"; transcript_id "MSTRG.95937.1"; exon_number "1"; scaffold_499 StringTie exon 617938 618061 1000 - . gene_id "MSTRG.95937"; transcript_id "MSTRG.95937.1"; exon_number "2"; scaffold_499 StringTie exon 618322 618461 1000 - . gene_id "MSTRG.95937"; transcript_id "MSTRG.95937.1"; exon_number "3"; scaffold_499 StringTie exon 622402 622501 1000 - . gene_id "MSTRG.95937"; transcript_id "MSTRG.95937.1"; exon_number "4"; scaffold_499 StringTie exon 630473 630707 1000 . . gene_id "MSTRG.95939"; transcript_id "MSTRG.95939.1"; exon_number "1"; scaffold_4991 StringTie exon 32130 32371 1000 . . gene_id "MSTRG.95967"; transcript_id "MSTRG.95967.1"; exon_number "1"; scaffold_49917 StringTie exon 869 1275 1000 . . gene_id "MSTRG.95970"; transcript_id "MSTRG.95970.1"; exon_number "1"; scaffold_4993 StringTie exon 11541 12207 1000 + . gene_id "MSTRG.95977"; transcript_id "MSTRG.95977.1"; exon_number "1"; scaffold_4995 StringTie exon 5763 6911 1000 . . gene_id "MSTRG.95993"; transcript_id "MSTRG.95993.1"; exon_number "1"; scaffold_4995 StringTie exon 23035 23169 1000 + . gene_id "MSTRG.95999"; transcript_id "MSTRG.95999.1"; exon_number "1"; scaffold_4995 StringTie exon 23989 24100 1000 + . gene_id "MSTRG.95999"; transcript_id "MSTRG.95999.1"; exon_number "2"; scaffold_4995 StringTie exon 37937 38146 1000 . . gene_id "MSTRG.96003"; transcript_id "MSTRG.96003.1"; exon_number "1"; scaffold_4996 StringTie exon 42061 42333 1000 . . gene_id "MSTRG.96016"; transcript_id "MSTRG.96016.1"; exon_number "1"; scaffold_4997 StringTie exon 3382 3644 1000 . . gene_id "MSTRG.96020"; transcript_id "MSTRG.96020.1"; exon_number "1"; scaffold_5 StringTie exon 32215 32273 1000 - . gene_id "MSTRG.96047"; transcript_id "MSTRG.96047.1"; exon_number "1"; scaffold_5 StringTie exon 32615 32672 1000 - . gene_id "MSTRG.96047"; transcript_id "MSTRG.96047.1"; exon_number "2"; scaffold_5 StringTie exon 32932 33108 1000 - . gene_id "MSTRG.96047"; transcript_id "MSTRG.96047.1"; exon_number "3"; scaffold_5 StringTie exon 33848 34026 1000 - . gene_id "MSTRG.96047"; transcript_id "MSTRG.96047.1"; exon_number "4"; scaffold_5 StringTie exon 35099 35351 1000 - . gene_id "MSTRG.96047"; transcript_id "MSTRG.96047.1"; exon_number "5"; scaffold_5 StringTie exon 35701 35894 1000 - . gene_id "MSTRG.96047"; transcript_id "MSTRG.96047.1"; exon_number "6"; scaffold_5 StringTie exon 102324 102543 1000 . . gene_id "MSTRG.96050"; transcript_id "MSTRG.96050.1"; exon_number "1"; scaffold_5 StringTie exon 188879 189093 1000 . . gene_id "MSTRG.96058"; transcript_id "MSTRG.96058.1"; exon_number "1"; scaffold_5 StringTie exon 252132 252148 1000 - . gene_id "MSTRG.96067"; transcript_id "MSTRG.96067.1"; exon_number "1"; scaffold_5 StringTie exon 252339 252455 1000 - . gene_id "MSTRG.96067"; transcript_id "MSTRG.96067.1"; exon_number "2"; scaffold_5 StringTie exon 252641 252763 1000 - . gene_id "MSTRG.96067"; transcript_id "MSTRG.96067.1"; exon_number "3"; scaffold_5 StringTie exon 252869 252942 1000 - . gene_id "MSTRG.96067"; transcript_id "MSTRG.96067.1"; exon_number "4"; scaffold_5 StringTie exon 314510 314826 1000 . . gene_id "MSTRG.96072"; transcript_id "MSTRG.96072.1"; exon_number "1"; scaffold_5 StringTie exon 329204 329511 1000 . . gene_id "MSTRG.96075"; transcript_id "MSTRG.96075.1"; exon_number "1"; scaffold_5 StringTie exon 364646 364876 1000 . . gene_id "MSTRG.96082"; transcript_id "MSTRG.96082.1"; exon_number "1"; scaffold_5 StringTie exon 684579 686610 1000 . . gene_id "MSTRG.96112"; transcript_id "MSTRG.96112.1"; exon_number "1"; scaffold_5 StringTie exon 778473 778630 1000 - . gene_id "MSTRG.96119"; transcript_id "MSTRG.96119.1"; exon_number "1"; scaffold_5 StringTie exon 788176 788288 1000 - . gene_id "MSTRG.96119"; transcript_id "MSTRG.96119.1"; exon_number "2"; scaffold_5 StringTie exon 789025 789220 1000 - . gene_id "MSTRG.96119"; transcript_id "MSTRG.96119.1"; exon_number "3"; scaffold_5 StringTie exon 819083 819100 1000 - . gene_id "MSTRG.96119"; transcript_id "MSTRG.96119.1"; exon_number "4"; scaffold_5 StringTie exon 874784 874994 1000 . . gene_id "MSTRG.96124"; transcript_id "MSTRG.96124.1"; exon_number "1"; scaffold_5 StringTie exon 964944 964994 1000 - . gene_id "MSTRG.96141"; transcript_id "MSTRG.96141.1"; exon_number "1"; scaffold_5 StringTie exon 965593 965660 1000 - . gene_id "MSTRG.96141"; transcript_id "MSTRG.96141.1"; exon_number "2"; scaffold_5 StringTie exon 966730 966991 1000 - . gene_id "MSTRG.96141"; transcript_id "MSTRG.96141.1"; exon_number "3"; scaffold_5 StringTie exon 1633763 1634007 1000 . . gene_id "MSTRG.96177"; transcript_id "MSTRG.96177.1"; exon_number "1"; scaffold_5 StringTie exon 1738731 1738816 1000 + . gene_id "MSTRG.96181"; transcript_id "MSTRG.96181.1"; exon_number "1"; scaffold_5 StringTie exon 1738969 1739069 1000 + . gene_id "MSTRG.96181"; transcript_id "MSTRG.96181.1"; exon_number "2"; scaffold_5 StringTie exon 1739404 1739448 1000 + . gene_id "MSTRG.96181"; transcript_id "MSTRG.96181.1"; exon_number "3"; scaffold_5 StringTie exon 1755264 1755637 1000 . . gene_id "MSTRG.96184"; transcript_id "MSTRG.96184.1"; exon_number "1"; scaffold_5 StringTie exon 1987531 1987767 1000 . . gene_id "MSTRG.96195"; transcript_id "MSTRG.96195.1"; exon_number "1"; scaffold_5 StringTie exon 2308711 2308971 1000 . . gene_id "MSTRG.96212"; transcript_id "MSTRG.96212.1"; exon_number "1"; scaffold_5 StringTie exon 2331288 2331550 1000 . . gene_id "MSTRG.96216"; transcript_id "MSTRG.96216.1"; exon_number "1"; scaffold_5 StringTie exon 2516206 2516342 1000 - . gene_id "MSTRG.96228"; transcript_id "MSTRG.96228.1"; exon_number "1"; scaffold_5 StringTie exon 2516551 2516818 1000 - . gene_id "MSTRG.96228"; transcript_id "MSTRG.96228.1"; exon_number "2"; scaffold_5 StringTie exon 2517291 2517503 1000 - . gene_id "MSTRG.96228"; transcript_id "MSTRG.96228.1"; exon_number "3"; scaffold_5 StringTie exon 2525119 2525254 1000 - . gene_id "MSTRG.96228"; transcript_id "MSTRG.96228.1"; exon_number "4"; scaffold_5 StringTie exon 2619081 2619158 1000 + . gene_id "MSTRG.96234"; transcript_id "MSTRG.96234.1"; exon_number "1"; scaffold_5 StringTie exon 2619302 2619442 1000 + . gene_id "MSTRG.96234"; transcript_id "MSTRG.96234.1"; exon_number "2"; scaffold_5 StringTie exon 2619683 2619768 1000 + . gene_id "MSTRG.96234"; transcript_id "MSTRG.96234.1"; exon_number "3"; scaffold_5 StringTie exon 2619964 2620060 1000 + . gene_id "MSTRG.96234"; transcript_id "MSTRG.96234.1"; exon_number "4"; scaffold_5 StringTie exon 2620438 2620729 1000 + . gene_id "MSTRG.96234"; transcript_id "MSTRG.96234.1"; exon_number "5"; scaffold_5 StringTie exon 2621475 2621760 1000 . . gene_id "MSTRG.96235"; transcript_id "MSTRG.96235.1"; exon_number "1"; scaffold_5 StringTie exon 2949998 2950217 1000 . . gene_id "MSTRG.96283"; transcript_id "MSTRG.96283.1"; exon_number "1"; scaffold_5 StringTie exon 3673452 3677211 1000 . . gene_id "MSTRG.96329"; transcript_id "MSTRG.96329.1"; exon_number "1"; scaffold_5 StringTie exon 3784130 3785828 1000 . . gene_id "MSTRG.96335"; transcript_id "MSTRG.96335.1"; exon_number "1"; scaffold_5 StringTie exon 3816794 3817202 1000 - . gene_id "MSTRG.96339"; transcript_id "MSTRG.96339.1"; exon_number "1"; scaffold_5 StringTie exon 3818035 3818180 1000 - . gene_id "MSTRG.96339"; transcript_id "MSTRG.96339.1"; exon_number "2"; scaffold_5 StringTie exon 3818554 3818661 1000 - . gene_id "MSTRG.96339"; transcript_id "MSTRG.96339.1"; exon_number "3"; scaffold_50 StringTie exon 14930 15140 1000 . . gene_id "MSTRG.96346"; transcript_id "MSTRG.96346.1"; exon_number "1"; scaffold_50 StringTie exon 64521 64750 1000 . . gene_id "MSTRG.96351"; transcript_id "MSTRG.96351.1"; exon_number "1"; scaffold_50 StringTie exon 217926 218123 1000 - . gene_id "MSTRG.96366"; transcript_id "MSTRG.96366.1"; exon_number "1"; scaffold_50 StringTie exon 218473 218505 1000 - . gene_id "MSTRG.96366"; transcript_id "MSTRG.96366.1"; exon_number "2"; scaffold_50 StringTie exon 409974 410378 1000 . . gene_id "MSTRG.96385"; transcript_id "MSTRG.96385.1"; exon_number "1"; scaffold_50 StringTie exon 579414 579713 1000 . . gene_id "MSTRG.96399"; transcript_id "MSTRG.96399.1"; exon_number "1"; scaffold_50 StringTie exon 581694 582021 1000 . . gene_id "MSTRG.96401"; transcript_id "MSTRG.96401.1"; exon_number "1"; scaffold_50 StringTie exon 890013 890042 1000 + . gene_id "MSTRG.96423"; transcript_id "MSTRG.96423.2"; exon_number "1"; scaffold_50 StringTie exon 890263 890393 1000 + . gene_id "MSTRG.96423"; transcript_id "MSTRG.96423.2"; exon_number "2"; scaffold_50 StringTie exon 890737 890802 1000 + . gene_id "MSTRG.96423"; transcript_id "MSTRG.96423.2"; exon_number "3"; scaffold_50 StringTie exon 891125 891210 1000 + . gene_id "MSTRG.96423"; transcript_id "MSTRG.96423.2"; exon_number "4"; scaffold_50 StringTie exon 891323 891344 1000 + . gene_id "MSTRG.96423"; transcript_id "MSTRG.96423.2"; exon_number "5"; scaffold_50 StringTie exon 926150 926335 1000 - . gene_id "MSTRG.96434"; transcript_id "MSTRG.96434.1"; exon_number "1"; scaffold_50 StringTie exon 926648 926745 1000 - . gene_id "MSTRG.96434"; transcript_id "MSTRG.96434.1"; exon_number "2"; scaffold_50 StringTie exon 1201597 1201882 1000 . . gene_id "MSTRG.96442"; transcript_id "MSTRG.96442.1"; exon_number "1"; scaffold_50 StringTie exon 1290313 1290748 1000 . . gene_id "MSTRG.96453"; transcript_id "MSTRG.96453.1"; exon_number "1"; scaffold_50 StringTie exon 1318959 1320467 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "1"; scaffold_50 StringTie exon 1320571 1320654 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "2"; scaffold_50 StringTie exon 1320843 1320937 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "3"; scaffold_50 StringTie exon 1321937 1321968 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "4"; scaffold_50 StringTie exon 1322272 1322412 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "5"; scaffold_50 StringTie exon 1322701 1322771 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "6"; scaffold_50 StringTie exon 1323810 1323904 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "7"; scaffold_50 StringTie exon 1324964 1325009 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "8"; scaffold_50 StringTie exon 1325236 1325375 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "9"; scaffold_50 StringTie exon 1327299 1327435 1000 - . gene_id "MSTRG.96456"; transcript_id "MSTRG.96456.2"; exon_number "10"; scaffold_50 StringTie exon 1502965 1503242 1000 . . gene_id "MSTRG.96468"; transcript_id "MSTRG.96468.1"; exon_number "1"; scaffold_50 StringTie exon 1700263 1700527 1000 . . gene_id "MSTRG.96491"; transcript_id "MSTRG.96491.1"; exon_number "1"; scaffold_50 StringTie exon 1975000 1975612 1000 + . gene_id "MSTRG.96522"; transcript_id "MSTRG.96522.1"; exon_number "1"; scaffold_50 StringTie exon 1975845 1975868 1000 + . gene_id "MSTRG.96522"; transcript_id "MSTRG.96522.1"; exon_number "2"; scaffold_50 StringTie exon 2016717 2016939 1000 . . gene_id "MSTRG.96532"; transcript_id "MSTRG.96532.1"; exon_number "1"; scaffold_50 StringTie exon 2102794 2103145 1000 . . gene_id "MSTRG.96540"; transcript_id "MSTRG.96540.1"; exon_number "1"; scaffold_500 StringTie exon 16789 17421 1000 . . gene_id "MSTRG.96549"; transcript_id "MSTRG.96549.1"; exon_number "1"; scaffold_500 StringTie exon 61049 61442 1000 . . gene_id "MSTRG.96555"; transcript_id "MSTRG.96555.1"; exon_number "1"; scaffold_500 StringTie exon 90062 90110 1000 + . gene_id "MSTRG.96557"; transcript_id "MSTRG.96557.1"; exon_number "1"; scaffold_500 StringTie exon 90356 91667 1000 + . gene_id "MSTRG.96557"; transcript_id "MSTRG.96557.1"; exon_number "2"; scaffold_500 StringTie exon 218627 219271 1000 . . gene_id "MSTRG.96567"; transcript_id "MSTRG.96567.1"; exon_number "1"; scaffold_500 StringTie exon 507882 508107 1000 . . gene_id "MSTRG.96592"; transcript_id "MSTRG.96592.1"; exon_number "1"; scaffold_500 StringTie exon 527503 527844 1000 . . gene_id "MSTRG.96593"; transcript_id "MSTRG.96593.1"; exon_number "1"; scaffold_500 StringTie exon 594836 595105 1000 . . gene_id "MSTRG.96596"; transcript_id "MSTRG.96596.1"; exon_number "1"; scaffold_500 StringTie exon 688911 689232 1000 . . gene_id "MSTRG.96608"; transcript_id "MSTRG.96608.1"; exon_number "1"; scaffold_500 StringTie exon 736962 737200 1000 . . gene_id "MSTRG.96612"; transcript_id "MSTRG.96612.1"; exon_number "1"; scaffold_5003 StringTie exon 5226 6083 1000 + . gene_id "MSTRG.96636"; transcript_id "MSTRG.96636.1"; exon_number "1"; scaffold_5003 StringTie exon 6935 6981 1000 + . gene_id "MSTRG.96636"; transcript_id "MSTRG.96636.1"; exon_number "2"; scaffold_5006 StringTie exon 12019 12315 1000 . . gene_id "MSTRG.96655"; transcript_id "MSTRG.96655.1"; exon_number "1"; scaffold_5008 StringTie exon 31206 31502 1000 . . gene_id "MSTRG.96675"; transcript_id "MSTRG.96675.1"; exon_number "1"; scaffold_501 StringTie exon 175399 175633 1000 . . gene_id "MSTRG.96691"; transcript_id "MSTRG.96691.1"; exon_number "1"; scaffold_501 StringTie exon 394347 394495 1000 + . gene_id "MSTRG.96705"; transcript_id "MSTRG.96705.1"; exon_number "1"; scaffold_501 StringTie exon 394593 394719 1000 + . gene_id "MSTRG.96705"; transcript_id "MSTRG.96705.1"; exon_number "2"; scaffold_501 StringTie exon 396223 396400 1000 + . gene_id "MSTRG.96705"; transcript_id "MSTRG.96705.1"; exon_number "3"; scaffold_501 StringTie exon 396508 397634 1000 + . gene_id "MSTRG.96705"; transcript_id "MSTRG.96705.1"; exon_number "4"; scaffold_501 StringTie exon 556904 557418 1000 . . gene_id "MSTRG.96711"; transcript_id "MSTRG.96711.1"; exon_number "1"; scaffold_5010 StringTie exon 4553 4991 1000 . . gene_id "MSTRG.96726"; transcript_id "MSTRG.96726.1"; exon_number "1"; scaffold_5011 StringTie exon 2055 2208 1000 - . gene_id "MSTRG.96731"; transcript_id "MSTRG.96731.2"; exon_number "1"; scaffold_5011 StringTie exon 5599 5879 1000 - . gene_id "MSTRG.96731"; transcript_id "MSTRG.96731.2"; exon_number "2"; scaffold_5012 StringTie exon 16641 17162 1000 . . gene_id "MSTRG.96735"; transcript_id "MSTRG.96735.1"; exon_number "1"; scaffold_50136 StringTie exon 2363 2591 1000 . . gene_id "MSTRG.96748"; transcript_id "MSTRG.96748.1"; exon_number "1"; scaffold_50154 StringTie exon 522 908 1000 . . gene_id "MSTRG.96760"; transcript_id "MSTRG.96760.1"; exon_number "1"; scaffold_5016 StringTie exon 41500 41595 1000 - . gene_id "MSTRG.96770"; transcript_id "MSTRG.96770.1"; exon_number "1"; scaffold_5016 StringTie exon 41874 42051 1000 - . gene_id "MSTRG.96770"; transcript_id "MSTRG.96770.1"; exon_number "2"; scaffold_5016 StringTie exon 42159 42329 1000 - . gene_id "MSTRG.96770"; transcript_id "MSTRG.96770.1"; exon_number "3"; scaffold_5016 StringTie exon 43161 43223 1000 - . gene_id "MSTRG.96770"; transcript_id "MSTRG.96770.1"; exon_number "4"; scaffold_5016 StringTie exon 43383 43534 1000 - . gene_id "MSTRG.96770"; transcript_id "MSTRG.96770.1"; exon_number "5"; scaffold_5019 StringTie exon 43963 43993 1000 - . gene_id "MSTRG.96793"; transcript_id "MSTRG.96793.1"; exon_number "1"; scaffold_5019 StringTie exon 44122 44197 1000 - . gene_id "MSTRG.96793"; transcript_id "MSTRG.96793.1"; exon_number "2"; scaffold_5019 StringTie exon 44610 44765 1000 - . gene_id "MSTRG.96793"; transcript_id "MSTRG.96793.1"; exon_number "3"; scaffold_5019 StringTie exon 44858 44996 1000 - . gene_id "MSTRG.96793"; transcript_id "MSTRG.96793.1"; exon_number "4"; scaffold_502 StringTie exon 638658 638895 1000 - . gene_id "MSTRG.96861"; transcript_id "MSTRG.96861.1"; exon_number "1"; scaffold_502 StringTie exon 639025 639144 1000 - . gene_id "MSTRG.96861"; transcript_id "MSTRG.96861.1"; exon_number "2"; scaffold_502 StringTie exon 639784 639860 1000 - . gene_id "MSTRG.96861"; transcript_id "MSTRG.96861.1"; exon_number "3"; scaffold_50261 StringTie exon 1243 1462 1000 . . gene_id "MSTRG.96904"; transcript_id "MSTRG.96904.1"; exon_number "1"; scaffold_5029 StringTie exon 1886 2162 1000 - . gene_id "MSTRG.96917"; transcript_id "MSTRG.96917.1"; exon_number "1"; scaffold_5029 StringTie exon 3314 3411 1000 - . gene_id "MSTRG.96917"; transcript_id "MSTRG.96917.1"; exon_number "2"; scaffold_503 StringTie exon 105370 105588 1000 . . gene_id "MSTRG.96935"; transcript_id "MSTRG.96935.1"; exon_number "1"; scaffold_503 StringTie exon 178249 178286 1000 + . gene_id "MSTRG.96943"; transcript_id "MSTRG.96943.1"; exon_number "1"; scaffold_503 StringTie exon 178579 178879 1000 + . gene_id "MSTRG.96943"; transcript_id "MSTRG.96943.1"; exon_number "2"; scaffold_503 StringTie exon 245172 245393 1000 . . gene_id "MSTRG.96945"; transcript_id "MSTRG.96945.1"; exon_number "1"; scaffold_503 StringTie exon 334812 335506 1000 . . gene_id "MSTRG.96949"; transcript_id "MSTRG.96949.1"; exon_number "1"; scaffold_50382 StringTie exon 290 516 1000 . . gene_id "MSTRG.97038"; transcript_id "MSTRG.97038.1"; exon_number "1"; scaffold_504 StringTie exon 231119 231326 1000 . . gene_id "MSTRG.97055"; transcript_id "MSTRG.97055.1"; exon_number "1"; scaffold_504 StringTie exon 353508 353774 1000 . . gene_id "MSTRG.97063"; transcript_id "MSTRG.97063.1"; exon_number "1"; scaffold_504 StringTie exon 680223 680439 1000 . . gene_id "MSTRG.97075"; transcript_id "MSTRG.97075.1"; exon_number "1"; scaffold_50413 StringTie exon 1517 1805 1000 . . gene_id "MSTRG.97085"; transcript_id "MSTRG.97085.1"; exon_number "1"; scaffold_5044 StringTie exon 6950 7212 1000 . . gene_id "MSTRG.97098"; transcript_id "MSTRG.97098.1"; exon_number "1"; scaffold_505 StringTie exon 89564 89773 1000 . . gene_id "MSTRG.97154"; transcript_id "MSTRG.97154.1"; exon_number "1"; scaffold_505 StringTie exon 90208 90462 1000 . . gene_id "MSTRG.97155"; transcript_id "MSTRG.97155.1"; exon_number "1"; scaffold_505 StringTie exon 439477 439628 1000 + . gene_id "MSTRG.97182"; transcript_id "MSTRG.97182.1"; exon_number "1"; scaffold_505 StringTie exon 441575 441634 1000 + . gene_id "MSTRG.97182"; transcript_id "MSTRG.97182.1"; exon_number "2"; scaffold_505 StringTie exon 509893 510097 1000 . . gene_id "MSTRG.97187"; transcript_id "MSTRG.97187.1"; exon_number "1"; scaffold_505 StringTie exon 714414 714646 1000 . . gene_id "MSTRG.97193"; transcript_id "MSTRG.97193.1"; exon_number "1"; scaffold_5050 StringTie exon 9684 10333 1000 . . gene_id "MSTRG.97196"; transcript_id "MSTRG.97196.1"; exon_number "1"; scaffold_50505 StringTie exon 1120 1327 1000 . . gene_id "MSTRG.97202"; transcript_id "MSTRG.97202.1"; exon_number "1"; scaffold_50522 StringTie exon 1 1230 1000 . . gene_id "MSTRG.97212"; transcript_id "MSTRG.97212.1"; exon_number "1"; scaffold_5053 StringTie exon 36219 36670 1000 . . gene_id "MSTRG.97217"; transcript_id "MSTRG.97217.1"; exon_number "1"; scaffold_5054 StringTie exon 35266 35702 1000 . . gene_id "MSTRG.97221"; transcript_id "MSTRG.97221.1"; exon_number "1"; scaffold_50565 StringTie exon 2028 2300 1000 . . gene_id "MSTRG.97241"; transcript_id "MSTRG.97241.1"; exon_number "1"; scaffold_5057 StringTie exon 12322 12384 1000 + . gene_id "MSTRG.97245"; transcript_id "MSTRG.97245.1"; exon_number "1"; scaffold_5057 StringTie exon 12590 12757 1000 + . gene_id "MSTRG.97245"; transcript_id "MSTRG.97245.1"; exon_number "2"; scaffold_5057 StringTie exon 13491 13511 1000 + . gene_id "MSTRG.97245"; transcript_id "MSTRG.97245.1"; exon_number "3"; scaffold_50591 StringTie exon 53 621 1000 . . gene_id "MSTRG.97257"; transcript_id "MSTRG.97257.1"; exon_number "1"; scaffold_506 StringTie exon 221879 222096 1000 . . gene_id "MSTRG.97280"; transcript_id "MSTRG.97280.1"; exon_number "1"; scaffold_506 StringTie exon 408746 408809 1000 - . gene_id "MSTRG.97287"; transcript_id "MSTRG.97287.1"; exon_number "1"; scaffold_506 StringTie exon 409049 409202 1000 - . gene_id "MSTRG.97287"; transcript_id "MSTRG.97287.1"; exon_number "2"; scaffold_506 StringTie exon 412343 412501 1000 - . gene_id "MSTRG.97287"; transcript_id "MSTRG.97287.1"; exon_number "3"; scaffold_506 StringTie exon 415051 415169 1000 - . gene_id "MSTRG.97287"; transcript_id "MSTRG.97287.1"; exon_number "4"; scaffold_506 StringTie exon 415298 415457 1000 - . gene_id "MSTRG.97287"; transcript_id "MSTRG.97287.1"; exon_number "5"; scaffold_506 StringTie exon 461028 461299 1000 . . gene_id "MSTRG.97289"; transcript_id "MSTRG.97289.1"; exon_number "1"; scaffold_506 StringTie exon 469684 470003 1000 . . gene_id "MSTRG.97290"; transcript_id "MSTRG.97290.1"; exon_number "1"; scaffold_506 StringTie exon 685645 685833 1000 + . gene_id "MSTRG.97302"; transcript_id "MSTRG.97302.1"; exon_number "1"; scaffold_506 StringTie exon 694437 694530 1000 + . gene_id "MSTRG.97302"; transcript_id "MSTRG.97302.1"; exon_number "2"; scaffold_506 StringTie exon 694684 694881 1000 + . gene_id "MSTRG.97302"; transcript_id "MSTRG.97302.1"; exon_number "3"; scaffold_506 StringTie exon 705747 705932 1000 + . gene_id "MSTRG.97302"; transcript_id "MSTRG.97302.1"; exon_number "4"; scaffold_5062 StringTie exon 4690 4911 1000 . . gene_id "MSTRG.97322"; transcript_id "MSTRG.97322.1"; exon_number "1"; scaffold_5063 StringTie exon 24595 24932 1000 . . gene_id "MSTRG.97326"; transcript_id "MSTRG.97326.1"; exon_number "1"; scaffold_5068 StringTie exon 31691 31805 1000 + . gene_id "MSTRG.97343"; transcript_id "MSTRG.97343.1"; exon_number "1"; scaffold_5068 StringTie exon 31899 31970 1000 + . gene_id "MSTRG.97343"; transcript_id "MSTRG.97343.1"; exon_number "2"; scaffold_5068 StringTie exon 32112 32212 1000 + . gene_id "MSTRG.97343"; transcript_id "MSTRG.97343.1"; exon_number "3"; scaffold_5068 StringTie exon 35313 35407 1000 + . gene_id "MSTRG.97343"; transcript_id "MSTRG.97343.1"; exon_number "4"; scaffold_5068 StringTie exon 35704 35777 1000 + . gene_id "MSTRG.97343"; transcript_id "MSTRG.97343.1"; exon_number "5"; scaffold_5068 StringTie exon 35931 36023 1000 + . gene_id "MSTRG.97343"; transcript_id "MSTRG.97343.1"; exon_number "6"; scaffold_5068 StringTie exon 36143 36437 1000 + . gene_id "MSTRG.97343"; transcript_id "MSTRG.97343.1"; exon_number "7"; scaffold_50686 StringTie exon 1343 1386 1000 + . gene_id "MSTRG.97347"; transcript_id "MSTRG.97347.1"; exon_number "1"; scaffold_50686 StringTie exon 1498 1610 1000 + . gene_id "MSTRG.97347"; transcript_id "MSTRG.97347.1"; exon_number "2"; scaffold_50686 StringTie exon 1759 1873 1000 + . gene_id "MSTRG.97347"; transcript_id "MSTRG.97347.1"; exon_number "3"; scaffold_50687 StringTie exon 5 273 1000 . . gene_id "MSTRG.97348"; transcript_id "MSTRG.97348.1"; exon_number "1"; scaffold_5069 StringTie exon 14589 14900 1000 . . gene_id "MSTRG.97351"; transcript_id "MSTRG.97351.1"; exon_number "1"; scaffold_507 StringTie exon 188713 191179 1000 . . gene_id "MSTRG.97371"; transcript_id "MSTRG.97371.1"; exon_number "1"; scaffold_507 StringTie exon 364444 364705 1000 . . gene_id "MSTRG.97381"; transcript_id "MSTRG.97381.1"; exon_number "1"; scaffold_507 StringTie exon 587430 587693 1000 . . gene_id "MSTRG.97393"; transcript_id "MSTRG.97393.1"; exon_number "1"; scaffold_507 StringTie exon 588829 589172 1000 . . gene_id "MSTRG.97394"; transcript_id "MSTRG.97394.1"; exon_number "1"; scaffold_50726 StringTie exon 616 931 1000 . . gene_id "MSTRG.97415"; transcript_id "MSTRG.97415.1"; exon_number "1"; scaffold_5074 StringTie exon 16047 16198 1000 - . gene_id "MSTRG.97423"; transcript_id "MSTRG.97423.1"; exon_number "1"; scaffold_5074 StringTie exon 16231 16333 1000 - . gene_id "MSTRG.97423"; transcript_id "MSTRG.97423.1"; exon_number "2"; scaffold_5077 StringTie exon 16257 16338 1000 + . gene_id "MSTRG.97446"; transcript_id "MSTRG.97446.1"; exon_number "1"; scaffold_5077 StringTie exon 19802 20122 1000 + . gene_id "MSTRG.97446"; transcript_id "MSTRG.97446.1"; exon_number "2"; scaffold_5077 StringTie exon 18481 18681 1000 . . gene_id "MSTRG.97447"; transcript_id "MSTRG.97447.1"; exon_number "1"; scaffold_5077 StringTie exon 40673 40874 1000 . . gene_id "MSTRG.97449"; transcript_id "MSTRG.97449.1"; exon_number "1"; scaffold_508 StringTie exon 246570 246784 1000 . . gene_id "MSTRG.97472"; transcript_id "MSTRG.97472.1"; exon_number "1"; scaffold_508 StringTie exon 451539 451567 1000 + . gene_id "MSTRG.97483"; transcript_id "MSTRG.97483.1"; exon_number "1"; scaffold_508 StringTie exon 455971 456077 1000 + . gene_id "MSTRG.97483"; transcript_id "MSTRG.97483.1"; exon_number "2"; scaffold_508 StringTie exon 458257 458325 1000 + . gene_id "MSTRG.97483"; transcript_id "MSTRG.97483.1"; exon_number "3"; scaffold_508 StringTie exon 462681 462774 1000 + . gene_id "MSTRG.97484"; transcript_id "MSTRG.97484.1"; exon_number "1"; scaffold_508 StringTie exon 466862 467048 1000 + . gene_id "MSTRG.97484"; transcript_id "MSTRG.97484.1"; exon_number "2"; scaffold_508 StringTie exon 467236 467329 1000 + . gene_id "MSTRG.97484"; transcript_id "MSTRG.97484.1"; exon_number "3"; scaffold_508 StringTie exon 682627 682642 1000 + . gene_id "MSTRG.97498"; transcript_id "MSTRG.97498.1"; exon_number "1"; scaffold_508 StringTie exon 686735 686869 1000 + . gene_id "MSTRG.97498"; transcript_id "MSTRG.97498.1"; exon_number "2"; scaffold_508 StringTie exon 687345 687482 1000 + . gene_id "MSTRG.97498"; transcript_id "MSTRG.97498.1"; exon_number "3"; scaffold_508 StringTie exon 687985 688082 1000 + . gene_id "MSTRG.97498"; transcript_id "MSTRG.97498.1"; exon_number "4"; scaffold_50813 StringTie exon 64 446 1000 . . gene_id "MSTRG.97510"; transcript_id "MSTRG.97510.1"; exon_number "1"; scaffold_50818 StringTie exon 1005 1133 1000 + . gene_id "MSTRG.97512"; transcript_id "MSTRG.97512.1"; exon_number "1"; scaffold_50818 StringTie exon 1324 1426 1000 + . gene_id "MSTRG.97512"; transcript_id "MSTRG.97512.1"; exon_number "2"; scaffold_5082 StringTie exon 10108 10371 1000 . . gene_id "MSTRG.97513"; transcript_id "MSTRG.97513.1"; exon_number "1"; scaffold_50837 StringTie exon 1918 2122 1000 - . gene_id "MSTRG.97518"; transcript_id "MSTRG.97518.1"; exon_number "1"; scaffold_50837 StringTie exon 2447 2514 1000 - . gene_id "MSTRG.97518"; transcript_id "MSTRG.97518.1"; exon_number "2"; scaffold_5087 StringTie exon 12009 12256 1000 . . gene_id "MSTRG.97543"; transcript_id "MSTRG.97543.1"; exon_number "1"; scaffold_5089 StringTie exon 11588 11668 1000 + . gene_id "MSTRG.97560"; transcript_id "MSTRG.97560.1"; exon_number "1"; scaffold_5089 StringTie exon 12161 12328 1000 + . gene_id "MSTRG.97560"; transcript_id "MSTRG.97560.1"; exon_number "2"; scaffold_509 StringTie exon 231695 231787 1000 - . gene_id "MSTRG.97583"; transcript_id "MSTRG.97583.1"; exon_number "1"; scaffold_509 StringTie exon 231841 231949 1000 - . gene_id "MSTRG.97583"; transcript_id "MSTRG.97583.1"; exon_number "2"; scaffold_509 StringTie exon 358448 358710 1000 . . gene_id "MSTRG.97600"; transcript_id "MSTRG.97600.1"; exon_number "1"; scaffold_509 StringTie exon 432795 432994 1000 . . gene_id "MSTRG.97609"; transcript_id "MSTRG.97609.1"; exon_number "1"; scaffold_509 StringTie exon 694898 695199 1000 . . gene_id "MSTRG.97622"; transcript_id "MSTRG.97622.1"; exon_number "1"; scaffold_50924 StringTie exon 744 1100 1000 . . gene_id "MSTRG.97641"; transcript_id "MSTRG.97641.1"; exon_number "1"; scaffold_50926 StringTie exon 620 1097 1000 . . gene_id "MSTRG.97642"; transcript_id "MSTRG.97642.1"; exon_number "1"; scaffold_50926 StringTie exon 1880 2185 1000 . . gene_id "MSTRG.97643"; transcript_id "MSTRG.97643.1"; exon_number "1"; scaffold_5093 StringTie exon 4779 4992 1000 . . gene_id "MSTRG.97645"; transcript_id "MSTRG.97645.1"; exon_number "1"; scaffold_5096 StringTie exon 22479 22916 1000 . . gene_id "MSTRG.97664"; transcript_id "MSTRG.97664.1"; exon_number "1"; scaffold_5096 StringTie exon 42526 42998 1000 + . gene_id "MSTRG.97665"; transcript_id "MSTRG.97665.1"; exon_number "1"; scaffold_5096 StringTie exon 43443 43570 1000 + . gene_id "MSTRG.97665"; transcript_id "MSTRG.97665.1"; exon_number "2"; scaffold_50981 StringTie exon 481 717 1000 . . gene_id "MSTRG.97671"; transcript_id "MSTRG.97671.1"; exon_number "1"; scaffold_51 StringTie exon 175318 175527 1000 . . gene_id "MSTRG.97688"; transcript_id "MSTRG.97688.1"; exon_number "1"; scaffold_51 StringTie exon 237051 237177 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "1"; scaffold_51 StringTie exon 240001 240040 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "2"; scaffold_51 StringTie exon 242926 243049 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "3"; scaffold_51 StringTie exon 247670 247715 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "4"; scaffold_51 StringTie exon 251850 251930 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "5"; scaffold_51 StringTie exon 252882 252981 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "6"; scaffold_51 StringTie exon 253673 253750 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "7"; scaffold_51 StringTie exon 254198 254264 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "8"; scaffold_51 StringTie exon 284185 284283 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "9"; scaffold_51 StringTie exon 284974 285031 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "10"; scaffold_51 StringTie exon 285268 285321 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "11"; scaffold_51 StringTie exon 288048 288104 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "12"; scaffold_51 StringTie exon 296444 296573 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "13"; scaffold_51 StringTie exon 297761 297829 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "14"; scaffold_51 StringTie exon 302383 302978 1000 + . gene_id "MSTRG.97699"; transcript_id "MSTRG.97699.1"; exon_number "15"; scaffold_51 StringTie exon 510060 510407 1000 . . gene_id "MSTRG.97705"; transcript_id "MSTRG.97705.1"; exon_number "1"; scaffold_51 StringTie exon 527885 528101 1000 . . gene_id "MSTRG.97706"; transcript_id "MSTRG.97706.1"; exon_number "1"; scaffold_51 StringTie exon 1157682 1158323 1000 . . gene_id "MSTRG.97736"; transcript_id "MSTRG.97736.1"; exon_number "1"; scaffold_51 StringTie exon 1448382 1448625 1000 . . gene_id "MSTRG.97744"; transcript_id "MSTRG.97744.1"; exon_number "1"; scaffold_51 StringTie exon 1910603 1910818 1000 . . gene_id "MSTRG.97784"; transcript_id "MSTRG.97784.1"; exon_number "1"; scaffold_51 StringTie exon 1934114 1934201 1000 - . gene_id "MSTRG.97790"; transcript_id "MSTRG.97790.1"; exon_number "1"; scaffold_51 StringTie exon 1934365 1934513 1000 - . gene_id "MSTRG.97790"; transcript_id "MSTRG.97790.1"; exon_number "2"; scaffold_51 StringTie exon 1934627 1934691 1000 - . gene_id "MSTRG.97790"; transcript_id "MSTRG.97790.1"; exon_number "3"; scaffold_51 StringTie exon 1935180 1935238 1000 - . gene_id "MSTRG.97790"; transcript_id "MSTRG.97790.1"; exon_number "4"; scaffold_51 StringTie exon 1948680 1948916 1000 . . gene_id "MSTRG.97793"; transcript_id "MSTRG.97793.1"; exon_number "1"; scaffold_510 StringTie exon 42469 42678 1000 . . gene_id "MSTRG.97801"; transcript_id "MSTRG.97801.1"; exon_number "1"; scaffold_510 StringTie exon 182403 182830 1000 . . gene_id "MSTRG.97812"; transcript_id "MSTRG.97812.1"; exon_number "1"; scaffold_510 StringTie exon 219656 220290 1000 . . gene_id "MSTRG.97818"; transcript_id "MSTRG.97818.1"; exon_number "1"; scaffold_510 StringTie exon 248717 248890 1000 + . gene_id "MSTRG.97829"; transcript_id "MSTRG.97829.1"; exon_number "1"; scaffold_510 StringTie exon 251758 251915 1000 + . gene_id "MSTRG.97829"; transcript_id "MSTRG.97829.1"; exon_number "2"; scaffold_510 StringTie exon 253219 253337 1000 + . gene_id "MSTRG.97829"; transcript_id "MSTRG.97829.1"; exon_number "3"; scaffold_510 StringTie exon 253437 253544 1000 + . gene_id "MSTRG.97829"; transcript_id "MSTRG.97829.1"; exon_number "4"; scaffold_510 StringTie exon 254403 254490 1000 + . gene_id "MSTRG.97829"; transcript_id "MSTRG.97829.1"; exon_number "5"; scaffold_510 StringTie exon 255018 255284 1000 + . gene_id "MSTRG.97830"; transcript_id "MSTRG.97830.1"; exon_number "1"; scaffold_510 StringTie exon 255485 255796 1000 + . gene_id "MSTRG.97830"; transcript_id "MSTRG.97830.1"; exon_number "2"; scaffold_510 StringTie exon 566569 566884 1000 . . gene_id "MSTRG.97853"; transcript_id "MSTRG.97853.1"; exon_number "1"; scaffold_51014 StringTie exon 1068 1344 1000 . . gene_id "MSTRG.97867"; transcript_id "MSTRG.97867.1"; exon_number "1"; scaffold_5102 StringTie exon 37297 37524 1000 . . gene_id "MSTRG.97870"; transcript_id "MSTRG.97870.1"; exon_number "1"; scaffold_5102 StringTie exon 42169 42532 1000 . . gene_id "MSTRG.97872"; transcript_id "MSTRG.97872.1"; exon_number "1"; scaffold_5104 StringTie exon 31478 31648 1000 - . gene_id "MSTRG.97884"; transcript_id "MSTRG.97884.1"; exon_number "1"; scaffold_5104 StringTie exon 31776 31901 1000 - . gene_id "MSTRG.97884"; transcript_id "MSTRG.97884.1"; exon_number "2"; scaffold_5104 StringTie exon 32053 32256 1000 - . gene_id "MSTRG.97884"; transcript_id "MSTRG.97884.1"; exon_number "3"; scaffold_5104 StringTie exon 32499 32807 1000 - . gene_id "MSTRG.97884"; transcript_id "MSTRG.97884.1"; exon_number "4"; scaffold_5104 StringTie exon 32968 33135 1000 - . gene_id "MSTRG.97884"; transcript_id "MSTRG.97884.1"; exon_number "5"; scaffold_5104 StringTie exon 42724 42842 1000 - . gene_id "MSTRG.97885"; transcript_id "MSTRG.97885.1"; exon_number "1"; scaffold_5104 StringTie exon 43126 43264 1000 - . gene_id "MSTRG.97885"; transcript_id "MSTRG.97885.1"; exon_number "2"; scaffold_5104 StringTie exon 43694 43919 1000 - . gene_id "MSTRG.97885"; transcript_id "MSTRG.97885.1"; exon_number "3"; scaffold_51044 StringTie exon 1212 1885 1000 - . gene_id "MSTRG.97889"; transcript_id "MSTRG.97889.1"; exon_number "1"; scaffold_51062 StringTie exon 728 2762 1000 . . gene_id "MSTRG.97900"; transcript_id "MSTRG.97900.1"; exon_number "1"; scaffold_511 StringTie exon 206887 207282 1000 . . gene_id "MSTRG.97937"; transcript_id "MSTRG.97937.1"; exon_number "1"; scaffold_511 StringTie exon 285266 285642 1000 . . gene_id "MSTRG.97946"; transcript_id "MSTRG.97946.1"; exon_number "1"; scaffold_511 StringTie exon 409011 409291 1000 . . gene_id "MSTRG.97955"; transcript_id "MSTRG.97955.1"; exon_number "1"; scaffold_51125 StringTie exon 1298 1564 1000 . . gene_id "MSTRG.97985"; transcript_id "MSTRG.97985.1"; exon_number "1"; scaffold_5113 StringTie exon 34451 34718 1000 . . gene_id "MSTRG.97991"; transcript_id "MSTRG.97991.1"; exon_number "1"; scaffold_51158 StringTie exon 2501 2744 1000 . . gene_id "MSTRG.98005"; transcript_id "MSTRG.98005.1"; exon_number "1"; scaffold_51161 StringTie exon 42 264 1000 + . gene_id "MSTRG.98011"; transcript_id "MSTRG.98011.1"; exon_number "1"; scaffold_51161 StringTie exon 386 463 1000 + . gene_id "MSTRG.98011"; transcript_id "MSTRG.98011.1"; exon_number "2"; scaffold_51161 StringTie exon 1437 2359 1000 + . gene_id "MSTRG.98011"; transcript_id "MSTRG.98011.1"; exon_number "3"; scaffold_5119 StringTie exon 23741 24082 1000 . . gene_id "MSTRG.98027"; transcript_id "MSTRG.98027.1"; exon_number "1"; scaffold_512 StringTie exon 224078 224305 1000 . . gene_id "MSTRG.98043"; transcript_id "MSTRG.98043.1"; exon_number "1"; scaffold_512 StringTie exon 624407 624688 1000 . . gene_id "MSTRG.98061"; transcript_id "MSTRG.98061.1"; exon_number "1"; scaffold_512 StringTie exon 637948 638108 1000 + . gene_id "MSTRG.98063"; transcript_id "MSTRG.98063.2"; exon_number "1"; scaffold_512 StringTie exon 640192 640272 1000 + . gene_id "MSTRG.98063"; transcript_id "MSTRG.98063.2"; exon_number "2"; scaffold_512 StringTie exon 642022 642165 1000 + . gene_id "MSTRG.98063"; transcript_id "MSTRG.98063.2"; exon_number "3"; scaffold_512 StringTie exon 642381 642491 1000 + . gene_id "MSTRG.98063"; transcript_id "MSTRG.98063.2"; exon_number "4"; scaffold_512 StringTie exon 648317 648663 1000 . . gene_id "MSTRG.98064"; transcript_id "MSTRG.98064.1"; exon_number "1"; scaffold_512 StringTie exon 670856 670866 1000 - . gene_id "MSTRG.98067"; transcript_id "MSTRG.98067.1"; exon_number "1"; scaffold_512 StringTie exon 671095 671298 1000 - . gene_id "MSTRG.98067"; transcript_id "MSTRG.98067.1"; exon_number "2"; scaffold_512 StringTie exon 672090 672269 1000 - . gene_id "MSTRG.98067"; transcript_id "MSTRG.98067.1"; exon_number "3"; scaffold_512 StringTie exon 672625 672824 1000 - . gene_id "MSTRG.98067"; transcript_id "MSTRG.98067.1"; exon_number "4"; scaffold_512 StringTie exon 673071 673184 1000 - . gene_id "MSTRG.98067"; transcript_id "MSTRG.98067.1"; exon_number "5"; scaffold_512 StringTie exon 684024 684207 1000 - . gene_id "MSTRG.98067"; transcript_id "MSTRG.98067.1"; exon_number "6"; scaffold_512 StringTie exon 685032 685211 1000 - . gene_id "MSTRG.98067"; transcript_id "MSTRG.98067.1"; exon_number "7"; scaffold_512 StringTie exon 685529 685594 1000 - . gene_id "MSTRG.98067"; transcript_id "MSTRG.98067.1"; exon_number "8"; scaffold_51225 StringTie exon 852 1299 1000 . . gene_id "MSTRG.98084"; transcript_id "MSTRG.98084.1"; exon_number "1"; scaffold_51264 StringTie exon 1321 2170 1000 . . gene_id "MSTRG.98107"; transcript_id "MSTRG.98107.1"; exon_number "1"; scaffold_5128 StringTie exon 24439 24691 1000 . . gene_id "MSTRG.98125"; transcript_id "MSTRG.98125.1"; exon_number "1"; scaffold_51290 StringTie exon 24 241 1000 . . gene_id "MSTRG.98135"; transcript_id "MSTRG.98135.1"; exon_number "1"; scaffold_513 StringTie exon 57078 57816 1000 + . gene_id "MSTRG.98143"; transcript_id "MSTRG.98143.1"; exon_number "1"; scaffold_513 StringTie exon 263779 264543 1000 . . gene_id "MSTRG.98154"; transcript_id "MSTRG.98154.1"; exon_number "1"; scaffold_513 StringTie exon 645139 645561 1000 . . gene_id "MSTRG.98172"; transcript_id "MSTRG.98172.1"; exon_number "1"; scaffold_51306 StringTie exon 689 871 1000 - . gene_id "MSTRG.98182"; transcript_id "MSTRG.98182.1"; exon_number "1"; scaffold_51306 StringTie exon 2079 2177 1000 - . gene_id "MSTRG.98182"; transcript_id "MSTRG.98182.1"; exon_number "2"; scaffold_5136 StringTie exon 42490 42826 1000 . . gene_id "MSTRG.98210"; transcript_id "MSTRG.98210.1"; exon_number "1"; scaffold_51369 StringTie exon 677 2036 1000 . . gene_id "MSTRG.98215"; transcript_id "MSTRG.98215.1"; exon_number "1"; scaffold_514 StringTie exon 360076 360306 1000 . . gene_id "MSTRG.98246"; transcript_id "MSTRG.98246.1"; exon_number "1"; scaffold_514 StringTie exon 497191 497669 1000 . . gene_id "MSTRG.98250"; transcript_id "MSTRG.98250.1"; exon_number "1"; scaffold_514 StringTie exon 688362 688805 1000 . . gene_id "MSTRG.98266"; transcript_id "MSTRG.98266.1"; exon_number "1"; scaffold_51418 StringTie exon 40 583 1000 . . gene_id "MSTRG.98279"; transcript_id "MSTRG.98279.1"; exon_number "1"; scaffold_5143 StringTie exon 5627 5952 1000 . . gene_id "MSTRG.98289"; transcript_id "MSTRG.98289.1"; exon_number "1"; scaffold_5143 StringTie exon 42510 42760 1000 . . gene_id "MSTRG.98297"; transcript_id "MSTRG.98297.1"; exon_number "1"; scaffold_5144 StringTie exon 37612 37807 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.1"; exon_number "1"; scaffold_5144 StringTie exon 38472 38708 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.1"; exon_number "2"; scaffold_5144 StringTie exon 41550 41681 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.1"; exon_number "3"; scaffold_5144 StringTie exon 41808 41982 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.1"; exon_number "4"; scaffold_5144 StringTie exon 43112 43269 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.1"; exon_number "5"; scaffold_5144 StringTie exon 43595 43678 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.1"; exon_number "6"; scaffold_5144 StringTie exon 37612 37807 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.2"; exon_number "1"; scaffold_5144 StringTie exon 43112 43269 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.2"; exon_number "2"; scaffold_5144 StringTie exon 43595 43678 1000 + . gene_id "MSTRG.98308"; transcript_id "MSTRG.98308.2"; exon_number "3"; scaffold_51455 StringTie exon 1744 2623 1000 . . gene_id "MSTRG.98323"; transcript_id "MSTRG.98323.1"; exon_number "1"; scaffold_5147 StringTie exon 29229 29531 1000 . . gene_id "MSTRG.98333"; transcript_id "MSTRG.98333.1"; exon_number "1"; scaffold_515 StringTie exon 371450 371656 1000 . . gene_id "MSTRG.98361"; transcript_id "MSTRG.98361.1"; exon_number "1"; scaffold_515 StringTie exon 723139 723349 1000 . . gene_id "MSTRG.98382"; transcript_id "MSTRG.98382.1"; exon_number "1"; scaffold_5150 StringTie exon 27477 27649 1000 + . gene_id "MSTRG.98385"; transcript_id "MSTRG.98385.1"; exon_number "1"; scaffold_5150 StringTie exon 28141 28229 1000 + . gene_id "MSTRG.98385"; transcript_id "MSTRG.98385.1"; exon_number "2"; scaffold_5150 StringTie exon 28473 28616 1000 + . gene_id "MSTRG.98385"; transcript_id "MSTRG.98385.1"; exon_number "3"; scaffold_5150 StringTie exon 29617 29680 1000 + . gene_id "MSTRG.98385"; transcript_id "MSTRG.98385.1"; exon_number "4"; scaffold_51539 StringTie exon 2448 2651 1000 . . gene_id "MSTRG.98402"; transcript_id "MSTRG.98402.1"; exon_number "1"; scaffold_5155 StringTie exon 496 934 1000 . . gene_id "MSTRG.98404"; transcript_id "MSTRG.98404.1"; exon_number "1"; scaffold_516 StringTie exon 211371 211408 1000 - . gene_id "MSTRG.98451"; transcript_id "MSTRG.98451.1"; exon_number "1"; scaffold_516 StringTie exon 211747 211899 1000 - . gene_id "MSTRG.98451"; transcript_id "MSTRG.98451.1"; exon_number "2"; scaffold_516 StringTie exon 212323 212350 1000 - . gene_id "MSTRG.98451"; transcript_id "MSTRG.98451.1"; exon_number "3"; scaffold_516 StringTie exon 214416 214572 1000 - . gene_id "MSTRG.98452"; transcript_id "MSTRG.98452.1"; exon_number "1"; scaffold_516 StringTie exon 214824 214969 1000 - . gene_id "MSTRG.98452"; transcript_id "MSTRG.98452.1"; exon_number "2"; scaffold_516 StringTie exon 215331 215392 1000 - . gene_id "MSTRG.98452"; transcript_id "MSTRG.98452.1"; exon_number "3"; scaffold_516 StringTie exon 215777 215910 1000 - . gene_id "MSTRG.98452"; transcript_id "MSTRG.98452.1"; exon_number "4"; scaffold_516 StringTie exon 216342 216367 1000 - . gene_id "MSTRG.98452"; transcript_id "MSTRG.98452.1"; exon_number "5"; scaffold_516 StringTie exon 368052 368207 1000 - . gene_id "MSTRG.98465"; transcript_id "MSTRG.98465.2"; exon_number "1"; scaffold_516 StringTie exon 372236 372419 1000 - . gene_id "MSTRG.98465"; transcript_id "MSTRG.98465.2"; exon_number "2"; scaffold_516 StringTie exon 373206 373357 1000 - . gene_id "MSTRG.98465"; transcript_id "MSTRG.98465.2"; exon_number "3"; scaffold_516 StringTie exon 376540 376572 1000 - . gene_id "MSTRG.98465"; transcript_id "MSTRG.98465.2"; exon_number "4"; scaffold_516 StringTie exon 555249 555407 1000 - . gene_id "MSTRG.98486"; transcript_id "MSTRG.98486.1"; exon_number "1"; scaffold_516 StringTie exon 555673 555775 1000 - . gene_id "MSTRG.98486"; transcript_id "MSTRG.98486.1"; exon_number "2"; scaffold_5160 StringTie exon 13036 13235 1000 . . gene_id "MSTRG.98505"; transcript_id "MSTRG.98505.1"; exon_number "1"; scaffold_5161 StringTie exon 18272 18472 1000 . . gene_id "MSTRG.98510"; transcript_id "MSTRG.98510.1"; exon_number "1"; scaffold_5162 StringTie exon 19407 19702 1000 + . gene_id "MSTRG.98521"; transcript_id "MSTRG.98521.1"; exon_number "1"; scaffold_5162 StringTie exon 35794 36468 1000 . . gene_id "MSTRG.98523"; transcript_id "MSTRG.98523.1"; exon_number "1"; scaffold_51622 StringTie exon 610 838 1000 . . gene_id "MSTRG.98524"; transcript_id "MSTRG.98524.1"; exon_number "1"; scaffold_51641 StringTie exon 709 977 1000 . . gene_id "MSTRG.98538"; transcript_id "MSTRG.98538.1"; exon_number "1"; scaffold_5166 StringTie exon 20067 20530 1000 . . gene_id "MSTRG.98554"; transcript_id "MSTRG.98554.1"; exon_number "1"; scaffold_517 StringTie exon 371783 372018 1000 . . gene_id "MSTRG.98600"; transcript_id "MSTRG.98600.1"; exon_number "1"; scaffold_517 StringTie exon 401504 401589 1000 - . gene_id "MSTRG.98603"; transcript_id "MSTRG.98603.1"; exon_number "1"; scaffold_517 StringTie exon 406358 406438 1000 - . gene_id "MSTRG.98603"; transcript_id "MSTRG.98603.1"; exon_number "2"; scaffold_517 StringTie exon 406637 406804 1000 - . gene_id "MSTRG.98603"; transcript_id "MSTRG.98603.1"; exon_number "3"; scaffold_517 StringTie exon 406997 407095 1000 - . gene_id "MSTRG.98603"; transcript_id "MSTRG.98603.1"; exon_number "4"; scaffold_517 StringTie exon 411779 411817 1000 - . gene_id "MSTRG.98603"; transcript_id "MSTRG.98603.1"; exon_number "5"; scaffold_517 StringTie exon 412167 412329 1000 - . gene_id "MSTRG.98603"; transcript_id "MSTRG.98603.1"; exon_number "6"; scaffold_517 StringTie exon 450722 450799 1000 - . gene_id "MSTRG.98606"; transcript_id "MSTRG.98606.1"; exon_number "1"; scaffold_517 StringTie exon 451029 451256 1000 - . gene_id "MSTRG.98606"; transcript_id "MSTRG.98606.1"; exon_number "2"; scaffold_517 StringTie exon 544973 545276 1000 . . gene_id "MSTRG.98609"; transcript_id "MSTRG.98609.1"; exon_number "1"; scaffold_51731 StringTie exon 2053 2642 1000 . . gene_id "MSTRG.98643"; transcript_id "MSTRG.98643.1"; exon_number "1"; scaffold_51735 StringTie exon 2506 2737 1000 . . gene_id "MSTRG.98645"; transcript_id "MSTRG.98645.1"; exon_number "1"; scaffold_5177 StringTie exon 29314 29618 1000 . . gene_id "MSTRG.98657"; transcript_id "MSTRG.98657.1"; exon_number "1"; scaffold_51786 StringTie exon 275 629 1000 . . gene_id "MSTRG.98669"; transcript_id "MSTRG.98669.1"; exon_number "1"; scaffold_51795 StringTie exon 1117 1481 1000 . . gene_id "MSTRG.98683"; transcript_id "MSTRG.98683.1"; exon_number "1"; scaffold_518 StringTie exon 334734 335121 1000 . . gene_id "MSTRG.98703"; transcript_id "MSTRG.98703.1"; exon_number "1"; scaffold_518 StringTie exon 365870 366168 1000 . . gene_id "MSTRG.98707"; transcript_id "MSTRG.98707.1"; exon_number "1"; scaffold_518 StringTie exon 509464 509664 1000 . . gene_id "MSTRG.98716"; transcript_id "MSTRG.98716.1"; exon_number "1"; scaffold_518 StringTie exon 620279 620480 1000 . . gene_id "MSTRG.98720"; transcript_id "MSTRG.98720.1"; exon_number "1"; scaffold_51842 StringTie exon 389 605 1000 . . gene_id "MSTRG.98762"; transcript_id "MSTRG.98762.1"; exon_number "1"; scaffold_51847 StringTie exon 718 1102 1000 . . gene_id "MSTRG.98763"; transcript_id "MSTRG.98763.1"; exon_number "1"; scaffold_51864 StringTie exon 1 925 1000 . . gene_id "MSTRG.98774"; transcript_id "MSTRG.98774.1"; exon_number "1"; scaffold_5187 StringTie exon 1187 1437 1000 + . gene_id "MSTRG.98777"; transcript_id "MSTRG.98777.1"; exon_number "1"; scaffold_5187 StringTie exon 1511 1568 1000 + . gene_id "MSTRG.98777"; transcript_id "MSTRG.98777.1"; exon_number "2"; scaffold_51873 StringTie exon 1 492 1000 . . gene_id "MSTRG.98779"; transcript_id "MSTRG.98779.1"; exon_number "1"; scaffold_51887 StringTie exon 11 588 1000 - . gene_id "MSTRG.98785"; transcript_id "MSTRG.98785.1"; exon_number "1"; scaffold_51887 StringTie exon 929 982 1000 - . gene_id "MSTRG.98785"; transcript_id "MSTRG.98785.1"; exon_number "2"; scaffold_519 StringTie exon 118502 118713 1000 . . gene_id "MSTRG.98798"; transcript_id "MSTRG.98798.1"; exon_number "1"; scaffold_519 StringTie exon 574069 574272 1000 . . gene_id "MSTRG.98822"; transcript_id "MSTRG.98822.1"; exon_number "1"; scaffold_51913 StringTie exon 202 655 1000 . . gene_id "MSTRG.98840"; transcript_id "MSTRG.98840.1"; exon_number "1"; scaffold_5195 StringTie exon 37786 38083 1000 . . gene_id "MSTRG.98867"; transcript_id "MSTRG.98867.1"; exon_number "1"; scaffold_52 StringTie exon 103474 103718 1000 . . gene_id "MSTRG.98892"; transcript_id "MSTRG.98892.1"; exon_number "1"; scaffold_52 StringTie exon 552299 552512 1000 . . gene_id "MSTRG.98916"; transcript_id "MSTRG.98916.1"; exon_number "1"; scaffold_52 StringTie exon 1437160 1437425 1000 . . gene_id "MSTRG.98965"; transcript_id "MSTRG.98965.1"; exon_number "1"; scaffold_52 StringTie exon 1440443 1440730 1000 . . gene_id "MSTRG.98967"; transcript_id "MSTRG.98967.1"; exon_number "1"; scaffold_52 StringTie exon 1564080 1564430 1000 . . gene_id "MSTRG.98979"; transcript_id "MSTRG.98979.1"; exon_number "1"; scaffold_52 StringTie exon 1704019 1704603 1000 . . gene_id "MSTRG.98997"; transcript_id "MSTRG.98997.1"; exon_number "1"; scaffold_52 StringTie exon 1942602 1942809 1000 . . gene_id "MSTRG.99026"; transcript_id "MSTRG.99026.1"; exon_number "1"; scaffold_52 StringTie exon 1973045 1973270 1000 . . gene_id "MSTRG.99029"; transcript_id "MSTRG.99029.1"; exon_number "1"; scaffold_52 StringTie exon 2056942 2057367 1000 + . gene_id "MSTRG.99034"; transcript_id "MSTRG.99034.1"; exon_number "1"; scaffold_52 StringTie exon 2065326 2065335 1000 + . gene_id "MSTRG.99034"; transcript_id "MSTRG.99034.1"; exon_number "2"; scaffold_52 StringTie exon 2101751 2101993 1000 . . gene_id "MSTRG.99039"; transcript_id "MSTRG.99039.1"; exon_number "1"; scaffold_520 StringTie exon 331475 331691 1000 . . gene_id "MSTRG.99056"; transcript_id "MSTRG.99056.1"; exon_number "1"; scaffold_520 StringTie exon 404389 404712 1000 . . gene_id "MSTRG.99060"; transcript_id "MSTRG.99060.1"; exon_number "1"; scaffold_520 StringTie exon 493925 494347 1000 . . gene_id "MSTRG.99062"; transcript_id "MSTRG.99062.1"; exon_number "1"; scaffold_520 StringTie exon 573034 573285 1000 . . gene_id "MSTRG.99066"; transcript_id "MSTRG.99066.1"; exon_number "1"; scaffold_520 StringTie exon 579771 580099 1000 . . gene_id "MSTRG.99067"; transcript_id "MSTRG.99067.1"; exon_number "1"; scaffold_5200 StringTie exon 4244 4423 1000 - . gene_id "MSTRG.99077"; transcript_id "MSTRG.99077.1"; exon_number "1"; scaffold_5200 StringTie exon 8568 8696 1000 - . gene_id "MSTRG.99077"; transcript_id "MSTRG.99077.1"; exon_number "2"; scaffold_5200 StringTie exon 8936 8982 1000 - . gene_id "MSTRG.99077"; transcript_id "MSTRG.99077.1"; exon_number "3"; scaffold_52000 StringTie exon 1329 1632 1000 . . gene_id "MSTRG.99083"; transcript_id "MSTRG.99083.1"; exon_number "1"; scaffold_5201 StringTie exon 40163 40373 1000 . . gene_id "MSTRG.99090"; transcript_id "MSTRG.99090.1"; exon_number "1"; scaffold_5202 StringTie exon 21393 21663 1000 . . gene_id "MSTRG.99101"; transcript_id "MSTRG.99101.1"; exon_number "1"; scaffold_5204 StringTie exon 26388 26705 1000 . . gene_id "MSTRG.99118"; transcript_id "MSTRG.99118.1"; exon_number "1"; scaffold_5204 StringTie exon 27453 27845 1000 . . gene_id "MSTRG.99119"; transcript_id "MSTRG.99119.1"; exon_number "1"; scaffold_5204 StringTie exon 40795 41026 1000 . . gene_id "MSTRG.99122"; transcript_id "MSTRG.99122.1"; exon_number "1"; scaffold_5205 StringTie exon 17590 17911 1000 . . gene_id "MSTRG.99128"; transcript_id "MSTRG.99128.1"; exon_number "1"; scaffold_5207 StringTie exon 28238 28465 1000 . . gene_id "MSTRG.99150"; transcript_id "MSTRG.99150.1"; exon_number "1"; scaffold_52072 StringTie exon 1265 1508 1000 . . gene_id "MSTRG.99155"; transcript_id "MSTRG.99155.1"; exon_number "1"; scaffold_52089 StringTie exon 2504 2722 1000 + . gene_id "MSTRG.99162"; transcript_id "MSTRG.99162.1"; exon_number "1"; scaffold_52091 StringTie exon 628 852 1000 . . gene_id "MSTRG.99164"; transcript_id "MSTRG.99164.1"; exon_number "1"; scaffold_521 StringTie exon 19555 19917 1000 . . gene_id "MSTRG.99168"; transcript_id "MSTRG.99168.1"; exon_number "1"; scaffold_521 StringTie exon 63962 64450 1000 . . gene_id "MSTRG.99175"; transcript_id "MSTRG.99175.1"; exon_number "1"; scaffold_521 StringTie exon 114671 114787 1000 + . gene_id "MSTRG.99188"; transcript_id "MSTRG.99188.1"; exon_number "1"; scaffold_521 StringTie exon 114896 115196 1000 + . gene_id "MSTRG.99188"; transcript_id "MSTRG.99188.1"; exon_number "2"; scaffold_521 StringTie exon 271635 271872 1000 . . gene_id "MSTRG.99207"; transcript_id "MSTRG.99207.1"; exon_number "1"; scaffold_5214 StringTie exon 33579 33953 1000 . . gene_id "MSTRG.99257"; transcript_id "MSTRG.99257.1"; exon_number "1"; scaffold_522 StringTie exon 98957 99158 1000 . . gene_id "MSTRG.99288"; transcript_id "MSTRG.99288.1"; exon_number "1"; scaffold_522 StringTie exon 105904 106161 1000 . . gene_id "MSTRG.99289"; transcript_id "MSTRG.99289.1"; exon_number "1"; scaffold_5227 StringTie exon 24332 24563 1000 . . gene_id "MSTRG.99344"; transcript_id "MSTRG.99344.1"; exon_number "1"; scaffold_52286 StringTie exon 108 468 1000 + . gene_id "MSTRG.99357"; transcript_id "MSTRG.99357.1"; exon_number "1"; scaffold_523 StringTie exon 85521 85728 1000 . . gene_id "MSTRG.99371"; transcript_id "MSTRG.99371.1"; exon_number "1"; scaffold_523 StringTie exon 333949 334154 1000 . . gene_id "MSTRG.99383"; transcript_id "MSTRG.99383.1"; exon_number "1"; scaffold_523 StringTie exon 472420 472662 1000 . . gene_id "MSTRG.99390"; transcript_id "MSTRG.99390.1"; exon_number "1"; scaffold_523 StringTie exon 722126 722351 1000 . . gene_id "MSTRG.99410"; transcript_id "MSTRG.99410.1"; exon_number "1"; scaffold_5230 StringTie exon 10206 10432 1000 . . gene_id "MSTRG.99413"; transcript_id "MSTRG.99413.1"; exon_number "1"; scaffold_5232 StringTie exon 34166 34316 1000 - . gene_id "MSTRG.99434"; transcript_id "MSTRG.99434.1"; exon_number "1"; scaffold_5232 StringTie exon 34533 34712 1000 - . gene_id "MSTRG.99434"; transcript_id "MSTRG.99434.1"; exon_number "2"; scaffold_5232 StringTie exon 43426 43648 1000 . . gene_id "MSTRG.99435"; transcript_id "MSTRG.99435.1"; exon_number "1"; scaffold_52320 StringTie exon 1026 1237 1000 . . gene_id "MSTRG.99436"; transcript_id "MSTRG.99436.1"; exon_number "1"; scaffold_5233 StringTie exon 7753 8386 1000 . . gene_id "MSTRG.99441"; transcript_id "MSTRG.99441.1"; exon_number "1"; scaffold_5235 StringTie exon 7105 7455 1000 . . gene_id "MSTRG.99456"; transcript_id "MSTRG.99456.1"; exon_number "1"; scaffold_5235 StringTie exon 25204 25477 1000 . . gene_id "MSTRG.99457"; transcript_id "MSTRG.99457.1"; exon_number "1"; scaffold_5235 StringTie exon 27767 28036 1000 . . gene_id "MSTRG.99458"; transcript_id "MSTRG.99458.1"; exon_number "1"; scaffold_5237 StringTie exon 36531 36811 1000 . . gene_id "MSTRG.99472"; transcript_id "MSTRG.99472.1"; exon_number "1"; scaffold_524 StringTie exon 397340 397577 1000 . . gene_id "MSTRG.99513"; transcript_id "MSTRG.99513.1"; exon_number "1"; scaffold_524 StringTie exon 463101 463319 1000 . . gene_id "MSTRG.99517"; transcript_id "MSTRG.99517.1"; exon_number "1"; scaffold_524 StringTie exon 493931 494159 1000 . . gene_id "MSTRG.99521"; transcript_id "MSTRG.99521.1"; exon_number "1"; scaffold_524 StringTie exon 625791 626023 1000 . . gene_id "MSTRG.99534"; transcript_id "MSTRG.99534.1"; exon_number "1"; scaffold_52429 StringTie exon 348 554 1000 - . gene_id "MSTRG.99573"; transcript_id "MSTRG.99573.1"; exon_number "1"; scaffold_5243 StringTie exon 21992 22219 1000 . . gene_id "MSTRG.99575"; transcript_id "MSTRG.99575.1"; exon_number "1"; scaffold_52484 StringTie exon 1379 1684 1000 . . gene_id "MSTRG.99602"; transcript_id "MSTRG.99602.1"; exon_number "1"; scaffold_52494 StringTie exon 527 877 1000 - . gene_id "MSTRG.99606"; transcript_id "MSTRG.99606.1"; exon_number "1"; scaffold_52494 StringTie exon 1334 1446 1000 - . gene_id "MSTRG.99606"; transcript_id "MSTRG.99606.1"; exon_number "2"; scaffold_525 StringTie exon 111625 111846 1000 . . gene_id "MSTRG.99613"; transcript_id "MSTRG.99613.1"; exon_number "1"; scaffold_525 StringTie exon 185855 185965 1000 + . gene_id "MSTRG.99626"; transcript_id "MSTRG.99626.2"; exon_number "1"; scaffold_525 StringTie exon 186730 186825 1000 + . gene_id "MSTRG.99626"; transcript_id "MSTRG.99626.2"; exon_number "2"; scaffold_525 StringTie exon 187738 187863 1000 + . gene_id "MSTRG.99626"; transcript_id "MSTRG.99626.2"; exon_number "3"; scaffold_525 StringTie exon 188499 189037 1000 + . gene_id "MSTRG.99626"; transcript_id "MSTRG.99626.2"; exon_number "4"; scaffold_525 StringTie exon 333918 334135 1000 . . gene_id "MSTRG.99641"; transcript_id "MSTRG.99641.1"; exon_number "1"; scaffold_52509 StringTie exon 1104 1203 1000 - . gene_id "MSTRG.99684"; transcript_id "MSTRG.99684.1"; exon_number "1"; scaffold_52509 StringTie exon 1325 1420 1000 - . gene_id "MSTRG.99684"; transcript_id "MSTRG.99684.1"; exon_number "2"; scaffold_52509 StringTie exon 1542 1574 1000 - . gene_id "MSTRG.99684"; transcript_id "MSTRG.99684.1"; exon_number "3"; scaffold_52509 StringTie exon 1696 1756 1000 - . gene_id "MSTRG.99684"; transcript_id "MSTRG.99684.1"; exon_number "4"; scaffold_52509 StringTie exon 2271 2329 1000 - . gene_id "MSTRG.99684"; transcript_id "MSTRG.99684.1"; exon_number "5"; scaffold_52514 StringTie exon 2477 2684 1000 . . gene_id "MSTRG.99689"; transcript_id "MSTRG.99689.1"; exon_number "1"; scaffold_52533 StringTie exon 18 499 1000 . . gene_id "MSTRG.99704"; transcript_id "MSTRG.99704.1"; exon_number "1"; scaffold_52539 StringTie exon 2099 2358 1000 . . gene_id "MSTRG.99707"; transcript_id "MSTRG.99707.1"; exon_number "1"; scaffold_52553 StringTie exon 1016 1282 1000 . . gene_id "MSTRG.99717"; transcript_id "MSTRG.99717.1"; exon_number "1"; scaffold_5259 StringTie exon 12137 12399 1000 . . gene_id "MSTRG.99736"; transcript_id "MSTRG.99736.1"; exon_number "1"; scaffold_5259 StringTie exon 19226 19744 1000 . . gene_id "MSTRG.99737"; transcript_id "MSTRG.99737.1"; exon_number "1"; scaffold_526 StringTie exon 48545 48758 1000 . . gene_id "MSTRG.99746"; transcript_id "MSTRG.99746.1"; exon_number "1"; scaffold_526 StringTie exon 113569 113782 1000 . . gene_id "MSTRG.99749"; transcript_id "MSTRG.99749.1"; exon_number "1"; scaffold_526 StringTie exon 491742 491962 1000 . . gene_id "MSTRG.99774"; transcript_id "MSTRG.99774.1"; exon_number "1"; scaffold_526 StringTie exon 676433 676660 1000 . . gene_id "MSTRG.99783"; transcript_id "MSTRG.99783.1"; exon_number "1"; scaffold_5260 StringTie exon 9 530 1000 . . gene_id "MSTRG.99784"; transcript_id "MSTRG.99784.1"; exon_number "1"; scaffold_5261 StringTie exon 27162 27210 1000 - . gene_id "MSTRG.99796"; transcript_id "MSTRG.99796.1"; exon_number "1"; scaffold_5261 StringTie exon 32851 33082 1000 - . gene_id "MSTRG.99796"; transcript_id "MSTRG.99796.1"; exon_number "2"; scaffold_52634 StringTie exon 1 372 1000 + . gene_id "MSTRG.99815"; transcript_id "MSTRG.99815.1"; exon_number "1"; scaffold_52672 StringTie exon 731 1034 1000 . . gene_id "MSTRG.99839"; transcript_id "MSTRG.99839.1"; exon_number "1"; scaffold_52692 StringTie exon 584 940 1000 . . gene_id "MSTRG.99852"; transcript_id "MSTRG.99852.1"; exon_number "1"; scaffold_527 StringTie exon 44298 45075 1000 . . gene_id "MSTRG.99859"; transcript_id "MSTRG.99859.1"; exon_number "1"; scaffold_527 StringTie exon 257537 257932 1000 . . gene_id "MSTRG.99871"; transcript_id "MSTRG.99871.1"; exon_number "1"; scaffold_527 StringTie exon 443195 443842 1000 + . gene_id "MSTRG.99879"; transcript_id "MSTRG.99879.4"; exon_number "1"; scaffold_527 StringTie exon 444334 444896 1000 + . gene_id "MSTRG.99879"; transcript_id "MSTRG.99879.4"; exon_number "2"; scaffold_5272 StringTie exon 23527 23945 1000 . . gene_id "MSTRG.99911"; transcript_id "MSTRG.99911.1"; exon_number "1"; scaffold_52725 StringTie exon 17 2700 1000 . . gene_id "MSTRG.99916"; transcript_id "MSTRG.99916.1"; exon_number "1"; scaffold_5274 StringTie exon 31554 32067 1000 - . gene_id "MSTRG.99924"; transcript_id "MSTRG.99924.1"; exon_number "1"; scaffold_5274 StringTie exon 33272 33326 1000 - . gene_id "MSTRG.99924"; transcript_id "MSTRG.99924.1"; exon_number "2"; scaffold_5274 StringTie exon 34364 34547 1000 - . gene_id "MSTRG.99924"; transcript_id "MSTRG.99924.1"; exon_number "3"; scaffold_5274 StringTie exon 34752 34852 1000 - . gene_id "MSTRG.99924"; transcript_id "MSTRG.99924.1"; exon_number "4"; scaffold_5274 StringTie exon 36551 36621 1000 - . gene_id "MSTRG.99924"; transcript_id "MSTRG.99924.1"; exon_number "5"; scaffold_5274 StringTie exon 37564 37590 1000 - . gene_id "MSTRG.99924"; transcript_id "MSTRG.99924.1"; exon_number "6"; scaffold_52750 StringTie exon 11 259 1000 - . gene_id "MSTRG.99932"; transcript_id "MSTRG.99932.1"; exon_number "1"; scaffold_5279 StringTie exon 6659 7022 1000 . . gene_id "MSTRG.99954"; transcript_id "MSTRG.99954.1"; exon_number "1"; scaffold_528 StringTie exon 172231 172561 1000 . . gene_id "MSTRG.99966"; transcript_id "MSTRG.99966.1"; exon_number "1"; scaffold_528 StringTie exon 385296 385698 1000 . . gene_id "MSTRG.99977"; transcript_id "MSTRG.99977.1"; exon_number "1"; scaffold_528 StringTie exon 683747 683958 1000 . . gene_id "MSTRG.99994"; transcript_id "MSTRG.99994.1"; exon_number "1"; scaffold_52859 StringTie exon 859 1402 1000 . . gene_id "MSTRG.100040"; transcript_id "MSTRG.100040.1"; exon_number "1"; scaffold_5287 StringTie exon 31179 31410 1000 . . gene_id "MSTRG.100052"; transcript_id "MSTRG.100052.1"; exon_number "1"; scaffold_52894 StringTie exon 1133 1846 1000 . . gene_id "MSTRG.100074"; transcript_id "MSTRG.100074.1"; exon_number "1"; scaffold_529 StringTie exon 66844 67122 1000 . . gene_id "MSTRG.100083"; transcript_id "MSTRG.100083.1"; exon_number "1"; scaffold_529 StringTie exon 156677 156890 1000 . . gene_id "MSTRG.100085"; transcript_id "MSTRG.100085.1"; exon_number "1"; scaffold_529 StringTie exon 501074 501478 1000 . . gene_id "MSTRG.100103"; transcript_id "MSTRG.100103.1"; exon_number "1"; scaffold_52902 StringTie exon 644 852 1000 . . gene_id "MSTRG.100123"; transcript_id "MSTRG.100123.1"; exon_number "1"; scaffold_52907 StringTie exon 212 534 1000 . . gene_id "MSTRG.100125"; transcript_id "MSTRG.100125.1"; exon_number "1"; scaffold_5291 StringTie exon 1399 1818 1000 . . gene_id "MSTRG.100127"; transcript_id "MSTRG.100127.1"; exon_number "1"; scaffold_52916 StringTie exon 1556 1843 1000 . . gene_id "MSTRG.100133"; transcript_id "MSTRG.100133.1"; exon_number "1"; scaffold_5293 StringTie exon 18870 19965 1000 . . gene_id "MSTRG.100141"; transcript_id "MSTRG.100141.1"; exon_number "1"; scaffold_5296 StringTie exon 28270 28598 1000 . . gene_id "MSTRG.100162"; transcript_id "MSTRG.100162.1"; exon_number "1"; scaffold_53 StringTie exon 913 1715 1000 . . gene_id "MSTRG.100183"; transcript_id "MSTRG.100183.1"; exon_number "1"; scaffold_53 StringTie exon 24833 25033 1000 . . gene_id "MSTRG.100184"; transcript_id "MSTRG.100184.1"; exon_number "1"; scaffold_53 StringTie exon 525713 526459 1000 . . gene_id "MSTRG.100232"; transcript_id "MSTRG.100232.1"; exon_number "1"; scaffold_53 StringTie exon 635615 635651 1000 + . gene_id "MSTRG.100244"; transcript_id "MSTRG.100244.1"; exon_number "1"; scaffold_53 StringTie exon 636115 636198 1000 + . gene_id "MSTRG.100244"; transcript_id "MSTRG.100244.1"; exon_number "2"; scaffold_53 StringTie exon 636475 636579 1000 + . gene_id "MSTRG.100244"; transcript_id "MSTRG.100244.1"; exon_number "3"; scaffold_53 StringTie exon 636722 636751 1000 + . gene_id "MSTRG.100244"; transcript_id "MSTRG.100244.1"; exon_number "4"; scaffold_53 StringTie exon 638391 638640 1000 . . gene_id "MSTRG.100245"; transcript_id "MSTRG.100245.1"; exon_number "1"; scaffold_53 StringTie exon 756250 756463 1000 . . gene_id "MSTRG.100266"; transcript_id "MSTRG.100266.1"; exon_number "1"; scaffold_53 StringTie exon 862072 862331 1000 - . gene_id "MSTRG.100274"; transcript_id "MSTRG.100274.1"; exon_number "1"; scaffold_53 StringTie exon 864998 865074 1000 - . gene_id "MSTRG.100274"; transcript_id "MSTRG.100274.1"; exon_number "2"; scaffold_53 StringTie exon 1168243 1169026 1000 - . gene_id "MSTRG.100296"; transcript_id "MSTRG.100296.1"; exon_number "1"; scaffold_53 StringTie exon 1186441 1186752 1000 . . gene_id "MSTRG.100301"; transcript_id "MSTRG.100301.1"; exon_number "1"; scaffold_53 StringTie exon 1480489 1480714 1000 . . gene_id "MSTRG.100317"; transcript_id "MSTRG.100317.1"; exon_number "1"; scaffold_53 StringTie exon 1889695 1889896 1000 . . gene_id "MSTRG.100342"; transcript_id "MSTRG.100342.1"; exon_number "1"; scaffold_53 StringTie exon 1954292 1954581 1000 . . gene_id "MSTRG.100346"; transcript_id "MSTRG.100346.1"; exon_number "1"; scaffold_53 StringTie exon 2040974 2041216 1000 . . gene_id "MSTRG.100350"; transcript_id "MSTRG.100350.1"; exon_number "1"; scaffold_530 StringTie exon 103561 103796 1000 . . gene_id "MSTRG.100370"; transcript_id "MSTRG.100370.1"; exon_number "1"; scaffold_530 StringTie exon 500685 500746 1000 + . gene_id "MSTRG.100392"; transcript_id "MSTRG.100392.1"; exon_number "1"; scaffold_530 StringTie exon 501028 501091 1000 + . gene_id "MSTRG.100392"; transcript_id "MSTRG.100392.1"; exon_number "2"; scaffold_530 StringTie exon 501183 501277 1000 + . gene_id "MSTRG.100392"; transcript_id "MSTRG.100392.1"; exon_number "3"; scaffold_53019 StringTie exon 1817 2052 1000 . . gene_id "MSTRG.100418"; transcript_id "MSTRG.100418.1"; exon_number "1"; scaffold_5304 StringTie exon 23558 23785 1000 . . gene_id "MSTRG.100432"; transcript_id "MSTRG.100432.1"; exon_number "1"; scaffold_53080 StringTie exon 1914 2273 1000 . . gene_id "MSTRG.100457"; transcript_id "MSTRG.100457.1"; exon_number "1"; scaffold_531 StringTie exon 11780 12162 1000 . . gene_id "MSTRG.100468"; transcript_id "MSTRG.100468.1"; exon_number "1"; scaffold_531 StringTie exon 76204 76371 1000 + . gene_id "MSTRG.100481"; transcript_id "MSTRG.100481.1"; exon_number "1"; scaffold_531 StringTie exon 76681 76825 1000 + . gene_id "MSTRG.100481"; transcript_id "MSTRG.100481.1"; exon_number "2"; scaffold_531 StringTie exon 77296 77447 1000 + . gene_id "MSTRG.100481"; transcript_id "MSTRG.100481.1"; exon_number "3"; scaffold_531 StringTie exon 78018 78137 1000 + . gene_id "MSTRG.100481"; transcript_id "MSTRG.100481.1"; exon_number "4"; scaffold_531 StringTie exon 78403 78534 1000 + . gene_id "MSTRG.100481"; transcript_id "MSTRG.100481.1"; exon_number "5"; scaffold_531 StringTie exon 78919 79050 1000 + . gene_id "MSTRG.100481"; transcript_id "MSTRG.100481.1"; exon_number "6"; scaffold_531 StringTie exon 79490 79587 1000 + . gene_id "MSTRG.100481"; transcript_id "MSTRG.100481.1"; exon_number "7"; scaffold_531 StringTie exon 401187 401422 1000 . . gene_id "MSTRG.100504"; transcript_id "MSTRG.100504.1"; exon_number "1"; scaffold_531 StringTie exon 546858 546972 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "1"; scaffold_531 StringTie exon 549668 549842 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "2"; scaffold_531 StringTie exon 551072 551173 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "3"; scaffold_531 StringTie exon 554175 554312 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "4"; scaffold_531 StringTie exon 554484 554561 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "5"; scaffold_531 StringTie exon 556047 556154 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "6"; scaffold_531 StringTie exon 560661 560748 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "7"; scaffold_531 StringTie exon 563465 563660 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "8"; scaffold_531 StringTie exon 565327 565518 1000 + . gene_id "MSTRG.100513"; transcript_id "MSTRG.100513.1"; exon_number "9"; scaffold_531 StringTie exon 590248 590842 1000 . . gene_id "MSTRG.100517"; transcript_id "MSTRG.100517.1"; exon_number "1"; scaffold_53147 StringTie exon 1651 1999 1000 . . gene_id "MSTRG.100557"; transcript_id "MSTRG.100557.1"; exon_number "1"; scaffold_5315 StringTie exon 19813 20019 1000 - . gene_id "MSTRG.100560"; transcript_id "MSTRG.100560.1"; exon_number "1"; scaffold_5315 StringTie exon 20161 20236 1000 - . gene_id "MSTRG.100560"; transcript_id "MSTRG.100560.1"; exon_number "2"; scaffold_5317 StringTie exon 22787 23031 1000 . . gene_id "MSTRG.100578"; transcript_id "MSTRG.100578.1"; exon_number "1"; scaffold_532 StringTie exon 138859 139024 1000 - . gene_id "MSTRG.100601"; transcript_id "MSTRG.100601.1"; exon_number "1"; scaffold_532 StringTie exon 146068 146147 1000 - . gene_id "MSTRG.100601"; transcript_id "MSTRG.100601.1"; exon_number "2"; scaffold_532 StringTie exon 216369 216634 1000 . . gene_id "MSTRG.100608"; transcript_id "MSTRG.100608.1"; exon_number "1"; scaffold_53214 StringTie exon 578 897 1000 . . gene_id "MSTRG.100639"; transcript_id "MSTRG.100639.1"; exon_number "1"; scaffold_5324 StringTie exon 10516 11427 1000 - . gene_id "MSTRG.100658"; transcript_id "MSTRG.100658.1"; exon_number "1"; scaffold_5324 StringTie exon 17324 17422 1000 - . gene_id "MSTRG.100658"; transcript_id "MSTRG.100658.1"; exon_number "2"; scaffold_5324 StringTie exon 17582 17653 1000 - . gene_id "MSTRG.100658"; transcript_id "MSTRG.100658.1"; exon_number "3"; scaffold_5324 StringTie exon 22534 22655 1000 - . gene_id "MSTRG.100658"; transcript_id "MSTRG.100658.1"; exon_number "4"; scaffold_5324 StringTie exon 24371 24410 1000 - . gene_id "MSTRG.100658"; transcript_id "MSTRG.100658.1"; exon_number "5"; scaffold_53250 StringTie exon 1100 1394 1000 . . gene_id "MSTRG.100660"; transcript_id "MSTRG.100660.1"; exon_number "1"; scaffold_53266 StringTie exon 1800 2508 1000 . . gene_id "MSTRG.100670"; transcript_id "MSTRG.100670.1"; exon_number "1"; scaffold_53292 StringTie exon 139 406 1000 . . gene_id "MSTRG.100683"; transcript_id "MSTRG.100683.1"; exon_number "1"; scaffold_533 StringTie exon 23001 23353 1000 . . gene_id "MSTRG.100687"; transcript_id "MSTRG.100687.1"; exon_number "1"; scaffold_533 StringTie exon 177183 177463 1000 . . gene_id "MSTRG.100700"; transcript_id "MSTRG.100700.1"; exon_number "1"; scaffold_533 StringTie exon 339953 340378 1000 - . gene_id "MSTRG.100712"; transcript_id "MSTRG.100712.1"; exon_number "1"; scaffold_533 StringTie exon 367971 368003 1000 - . gene_id "MSTRG.100712"; transcript_id "MSTRG.100712.1"; exon_number "2"; scaffold_533 StringTie exon 421751 421857 1000 - . gene_id "MSTRG.100718"; transcript_id "MSTRG.100718.3"; exon_number "1"; scaffold_533 StringTie exon 422642 422779 1000 - . gene_id "MSTRG.100718"; transcript_id "MSTRG.100718.3"; exon_number "2"; scaffold_533 StringTie exon 423181 423221 1000 - . gene_id "MSTRG.100718"; transcript_id "MSTRG.100718.3"; exon_number "3"; scaffold_533 StringTie exon 482915 483544 1000 . . gene_id "MSTRG.100720"; transcript_id "MSTRG.100720.1"; exon_number "1"; scaffold_533 StringTie exon 560410 560815 1000 . . gene_id "MSTRG.100728"; transcript_id "MSTRG.100728.1"; exon_number "1"; scaffold_5331 StringTie exon 33195 33438 1000 . . gene_id "MSTRG.100746"; transcript_id "MSTRG.100746.1"; exon_number "1"; scaffold_53317 StringTie exon 2248 2664 1000 . . gene_id "MSTRG.100749"; transcript_id "MSTRG.100749.1"; exon_number "1"; scaffold_5333 StringTie exon 16607 17891 1000 . . gene_id "MSTRG.100756"; transcript_id "MSTRG.100756.1"; exon_number "1"; scaffold_5336 StringTie exon 12961 13032 1000 - . gene_id "MSTRG.100774"; transcript_id "MSTRG.100774.1"; exon_number "1"; scaffold_5336 StringTie exon 13175 13398 1000 - . gene_id "MSTRG.100774"; transcript_id "MSTRG.100774.1"; exon_number "2"; scaffold_53361 StringTie exon 2198 2565 1000 . . gene_id "MSTRG.100779"; transcript_id "MSTRG.100779.1"; exon_number "1"; scaffold_534 StringTie exon 324778 325127 1000 - . gene_id "MSTRG.100831"; transcript_id "MSTRG.100831.1"; exon_number "1"; scaffold_534 StringTie exon 325885 326027 1000 - . gene_id "MSTRG.100831"; transcript_id "MSTRG.100831.1"; exon_number "2"; scaffold_534 StringTie exon 326215 326362 1000 - . gene_id "MSTRG.100831"; transcript_id "MSTRG.100831.1"; exon_number "3"; scaffold_534 StringTie exon 326498 326622 1000 - . gene_id "MSTRG.100831"; transcript_id "MSTRG.100831.1"; exon_number "4"; scaffold_534 StringTie exon 328384 328425 1000 - . gene_id "MSTRG.100831"; transcript_id "MSTRG.100831.1"; exon_number "5"; scaffold_534 StringTie exon 466790 467033 1000 . . gene_id "MSTRG.100847"; transcript_id "MSTRG.100847.1"; exon_number "1"; scaffold_5342 StringTie exon 22868 24763 1000 . . gene_id "MSTRG.100873"; transcript_id "MSTRG.100873.1"; exon_number "1"; scaffold_535 StringTie exon 102946 103202 1000 . . gene_id "MSTRG.100921"; transcript_id "MSTRG.100921.1"; exon_number "1"; scaffold_535 StringTie exon 111024 111044 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "1"; scaffold_535 StringTie exon 112844 112899 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "2"; scaffold_535 StringTie exon 113048 113081 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "3"; scaffold_535 StringTie exon 115386 115472 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "4"; scaffold_535 StringTie exon 115616 115693 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "5"; scaffold_535 StringTie exon 115923 115988 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "6"; scaffold_535 StringTie exon 116819 117006 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "7"; scaffold_535 StringTie exon 117274 117369 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "8"; scaffold_535 StringTie exon 117479 117567 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "9"; scaffold_535 StringTie exon 117799 117874 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "10"; scaffold_535 StringTie exon 119703 119802 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "11"; scaffold_535 StringTie exon 119882 120006 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "12"; scaffold_535 StringTie exon 120183 120303 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "13"; scaffold_535 StringTie exon 121912 122024 1000 + . gene_id "MSTRG.100924"; transcript_id "MSTRG.100924.1"; exon_number "14"; scaffold_535 StringTie exon 580600 580676 1000 + . gene_id "MSTRG.100960"; transcript_id "MSTRG.100960.1"; exon_number "1"; scaffold_535 StringTie exon 581395 581511 1000 + . gene_id "MSTRG.100960"; transcript_id "MSTRG.100960.1"; exon_number "2"; scaffold_535 StringTie exon 581943 582077 1000 + . gene_id "MSTRG.100960"; transcript_id "MSTRG.100960.1"; exon_number "3"; scaffold_535 StringTie exon 582268 582389 1000 + . gene_id "MSTRG.100960"; transcript_id "MSTRG.100960.1"; exon_number "4"; scaffold_535 StringTie exon 582630 582772 1000 + . gene_id "MSTRG.100960"; transcript_id "MSTRG.100960.1"; exon_number "5"; scaffold_535 StringTie exon 617729 618020 1000 . . gene_id "MSTRG.100966"; transcript_id "MSTRG.100966.1"; exon_number "1"; scaffold_535 StringTie exon 618344 619695 1000 . . gene_id "MSTRG.100967"; transcript_id "MSTRG.100967.1"; exon_number "1"; scaffold_5350 StringTie exon 9978 10184 1000 . . gene_id "MSTRG.100975"; transcript_id "MSTRG.100975.1"; exon_number "1"; scaffold_5355 StringTie exon 9837 10340 1000 . . gene_id "MSTRG.100998"; transcript_id "MSTRG.100998.1"; exon_number "1"; scaffold_536 StringTie exon 449629 449902 1000 . . gene_id "MSTRG.101051"; transcript_id "MSTRG.101051.1"; exon_number "1"; scaffold_536 StringTie exon 517221 517445 1000 . . gene_id "MSTRG.101059"; transcript_id "MSTRG.101059.1"; exon_number "1"; scaffold_536 StringTie exon 543359 543675 1000 + . gene_id "MSTRG.101064"; transcript_id "MSTRG.101064.1"; exon_number "1"; scaffold_536 StringTie exon 549043 549491 1000 + . gene_id "MSTRG.101064"; transcript_id "MSTRG.101064.1"; exon_number "2"; scaffold_536 StringTie exon 581293 582788 1000 . . gene_id "MSTRG.101071"; transcript_id "MSTRG.101071.1"; exon_number "1"; scaffold_536 StringTie exon 685909 686240 1000 . . gene_id "MSTRG.101075"; transcript_id "MSTRG.101075.1"; exon_number "1"; scaffold_5360 StringTie exon 5473 5687 1000 . . gene_id "MSTRG.101077"; transcript_id "MSTRG.101077.1"; exon_number "1"; scaffold_5362 StringTie exon 29541 29751 1000 . . gene_id "MSTRG.101098"; transcript_id "MSTRG.101098.1"; exon_number "1"; scaffold_53631 StringTie exon 2289 2622 1000 . . gene_id "MSTRG.101104"; transcript_id "MSTRG.101104.1"; exon_number "1"; scaffold_537 StringTie exon 233183 233415 1000 . . gene_id "MSTRG.101162"; transcript_id "MSTRG.101162.1"; exon_number "1"; scaffold_5370 StringTie exon 18418 18818 1000 . . gene_id "MSTRG.101183"; transcript_id "MSTRG.101183.1"; exon_number "1"; scaffold_5372 StringTie exon 34888 35199 1000 . . gene_id "MSTRG.101203"; transcript_id "MSTRG.101203.1"; exon_number "1"; scaffold_5373 StringTie exon 5795 6001 1000 . . gene_id "MSTRG.101209"; transcript_id "MSTRG.101209.1"; exon_number "1"; scaffold_5374 StringTie exon 1293 1976 1000 . . gene_id "MSTRG.101213"; transcript_id "MSTRG.101213.1"; exon_number "1"; scaffold_5374 StringTie exon 2900 3137 1000 - . gene_id "MSTRG.101214"; transcript_id "MSTRG.101214.1"; exon_number "1"; scaffold_5374 StringTie exon 29090 29143 1000 - . gene_id "MSTRG.101214"; transcript_id "MSTRG.101214.1"; exon_number "2"; scaffold_53797 StringTie exon 783 1054 1000 . . gene_id "MSTRG.101243"; transcript_id "MSTRG.101243.1"; exon_number "1"; scaffold_538 StringTie exon 508458 508782 1000 . . gene_id "MSTRG.101283"; transcript_id "MSTRG.101283.1"; exon_number "1"; scaffold_53809 StringTie exon 2114 2531 1000 . . gene_id "MSTRG.101308"; transcript_id "MSTRG.101308.1"; exon_number "1"; scaffold_5381 StringTie exon 24733 25118 1000 . . gene_id "MSTRG.101313"; transcript_id "MSTRG.101313.1"; exon_number "1"; scaffold_5384 StringTie exon 16710 16932 1000 . . gene_id "MSTRG.101331"; transcript_id "MSTRG.101331.1"; exon_number "1"; scaffold_5387 StringTie exon 3784 4258 1000 . . gene_id "MSTRG.101348"; transcript_id "MSTRG.101348.1"; exon_number "1"; scaffold_5387 StringTie exon 16196 16601 1000 . . gene_id "MSTRG.101350"; transcript_id "MSTRG.101350.1"; exon_number "1"; scaffold_5388 StringTie exon 2893 2982 1000 + . gene_id "MSTRG.101355"; transcript_id "MSTRG.101355.1"; exon_number "1"; scaffold_5388 StringTie exon 3268 3385 1000 + . gene_id "MSTRG.101355"; transcript_id "MSTRG.101355.1"; exon_number "2"; scaffold_5388 StringTie exon 22562 22808 1000 . . gene_id "MSTRG.101364"; transcript_id "MSTRG.101364.1"; exon_number "1"; scaffold_5388 StringTie exon 23313 23605 1000 . . gene_id "MSTRG.101365"; transcript_id "MSTRG.101365.1"; exon_number "1"; scaffold_5388 StringTie exon 31687 33405 1000 . . gene_id "MSTRG.101367"; transcript_id "MSTRG.101367.1"; exon_number "1"; scaffold_539 StringTie exon 77585 77875 1000 . . gene_id "MSTRG.101385"; transcript_id "MSTRG.101385.1"; exon_number "1"; scaffold_539 StringTie exon 92640 93227 1000 . . gene_id "MSTRG.101388"; transcript_id "MSTRG.101388.1"; exon_number "1"; scaffold_53901 StringTie exon 1682 1988 1000 . . gene_id "MSTRG.101430"; transcript_id "MSTRG.101430.1"; exon_number "1"; scaffold_5393 StringTie exon 861 1239 1000 . . gene_id "MSTRG.101446"; transcript_id "MSTRG.101446.1"; exon_number "1"; scaffold_5393 StringTie exon 37298 37328 1000 + . gene_id "MSTRG.101457"; transcript_id "MSTRG.101457.1"; exon_number "1"; scaffold_5393 StringTie exon 37467 39277 1000 + . gene_id "MSTRG.101457"; transcript_id "MSTRG.101457.1"; exon_number "2"; scaffold_5393 StringTie exon 39429 39477 1000 + . gene_id "MSTRG.101457"; transcript_id "MSTRG.101457.1"; exon_number "3"; scaffold_5393 StringTie exon 39693 40197 1000 + . gene_id "MSTRG.101457"; transcript_id "MSTRG.101457.1"; exon_number "4"; scaffold_54 StringTie exon 137579 139507 1000 . . gene_id "MSTRG.101510"; transcript_id "MSTRG.101510.1"; exon_number "1"; scaffold_54 StringTie exon 185333 185551 1000 . . gene_id "MSTRG.101517"; transcript_id "MSTRG.101517.1"; exon_number "1"; scaffold_54 StringTie exon 537856 538080 1000 . . gene_id "MSTRG.101536"; transcript_id "MSTRG.101536.1"; exon_number "1"; scaffold_54 StringTie exon 824087 824370 1000 - . gene_id "MSTRG.101556"; transcript_id "MSTRG.101556.1"; exon_number "1"; scaffold_54 StringTie exon 912714 912942 1000 . . gene_id "MSTRG.101559"; transcript_id "MSTRG.101559.1"; exon_number "1"; scaffold_54 StringTie exon 1308312 1308378 1000 + . gene_id "MSTRG.101593"; transcript_id "MSTRG.101593.2"; exon_number "1"; scaffold_54 StringTie exon 1308951 1309188 1000 + . gene_id "MSTRG.101593"; transcript_id "MSTRG.101593.2"; exon_number "2"; scaffold_54 StringTie exon 1312758 1312882 1000 + . gene_id "MSTRG.101593"; transcript_id "MSTRG.101593.2"; exon_number "3"; scaffold_54 StringTie exon 1316695 1316862 1000 + . gene_id "MSTRG.101593"; transcript_id "MSTRG.101593.2"; exon_number "4"; scaffold_54 StringTie exon 1457296 1457507 1000 . . gene_id "MSTRG.101613"; transcript_id "MSTRG.101613.1"; exon_number "1"; scaffold_54 StringTie exon 1541370 1543020 1000 . . gene_id "MSTRG.101616"; transcript_id "MSTRG.101616.1"; exon_number "1"; scaffold_54 StringTie exon 1548554 1548801 1000 . . gene_id "MSTRG.101617"; transcript_id "MSTRG.101617.1"; exon_number "1"; scaffold_54 StringTie exon 1977704 1977916 1000 . . gene_id "MSTRG.101647"; transcript_id "MSTRG.101647.1"; exon_number "1"; scaffold_54 StringTie exon 1989635 1990083 1000 . . gene_id "MSTRG.101649"; transcript_id "MSTRG.101649.1"; exon_number "1"; scaffold_54 StringTie exon 2064610 2064907 1000 . . gene_id "MSTRG.101651"; transcript_id "MSTRG.101651.1"; exon_number "1"; scaffold_540 StringTie exon 109262 109281 1000 - . gene_id "MSTRG.101663"; transcript_id "MSTRG.101663.1"; exon_number "1"; scaffold_540 StringTie exon 109456 109557 1000 - . gene_id "MSTRG.101663"; transcript_id "MSTRG.101663.1"; exon_number "2"; scaffold_540 StringTie exon 109774 109874 1000 - . gene_id "MSTRG.101663"; transcript_id "MSTRG.101663.1"; exon_number "3"; scaffold_540 StringTie exon 110823 111083 1000 - . gene_id "MSTRG.101663"; transcript_id "MSTRG.101663.1"; exon_number "4"; scaffold_540 StringTie exon 329307 329470 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "1"; scaffold_540 StringTie exon 329578 329744 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "2"; scaffold_540 StringTie exon 329924 329985 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "3"; scaffold_540 StringTie exon 330124 330202 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "4"; scaffold_540 StringTie exon 330347 330541 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "5"; scaffold_540 StringTie exon 330624 330794 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "6"; scaffold_540 StringTie exon 330957 331110 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "7"; scaffold_540 StringTie exon 331200 331393 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "8"; scaffold_540 StringTie exon 331555 331711 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "9"; scaffold_540 StringTie exon 331953 332042 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "10"; scaffold_540 StringTie exon 334053 334155 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "11"; scaffold_540 StringTie exon 334307 334591 1000 + . gene_id "MSTRG.101680"; transcript_id "MSTRG.101680.1"; exon_number "12"; scaffold_540 StringTie exon 367267 367550 1000 . . gene_id "MSTRG.101682"; transcript_id "MSTRG.101682.1"; exon_number "1"; scaffold_540 StringTie exon 630920 631127 1000 . . gene_id "MSTRG.101714"; transcript_id "MSTRG.101714.1"; exon_number "1"; scaffold_5407 StringTie exon 18637 18843 1000 . . gene_id "MSTRG.101759"; transcript_id "MSTRG.101759.1"; exon_number "1"; scaffold_5408 StringTie exon 58 733 1000 . . gene_id "MSTRG.101769"; transcript_id "MSTRG.101769.1"; exon_number "1"; scaffold_54094 StringTie exon 1068 1315 1000 . . gene_id "MSTRG.101774"; transcript_id "MSTRG.101774.1"; exon_number "1"; scaffold_541 StringTie exon 51634 51922 1000 . . gene_id "MSTRG.101781"; transcript_id "MSTRG.101781.1"; exon_number "1"; scaffold_541 StringTie exon 180597 180643 1000 - . gene_id "MSTRG.101790"; transcript_id "MSTRG.101790.1"; exon_number "1"; scaffold_541 StringTie exon 181035 181096 1000 - . gene_id "MSTRG.101790"; transcript_id "MSTRG.101790.1"; exon_number "2"; scaffold_541 StringTie exon 181449 181629 1000 - . gene_id "MSTRG.101790"; transcript_id "MSTRG.101790.1"; exon_number "3"; scaffold_541 StringTie exon 182085 182273 1000 - . gene_id "MSTRG.101790"; transcript_id "MSTRG.101790.1"; exon_number "4"; scaffold_541 StringTie exon 183217 183275 1000 - . gene_id "MSTRG.101790"; transcript_id "MSTRG.101790.1"; exon_number "5"; scaffold_541 StringTie exon 195636 195752 1000 - . gene_id "MSTRG.101791"; transcript_id "MSTRG.101791.1"; exon_number "1"; scaffold_541 StringTie exon 196116 196424 1000 - . gene_id "MSTRG.101791"; transcript_id "MSTRG.101791.1"; exon_number "2"; scaffold_541 StringTie exon 197178 197382 1000 + . gene_id "MSTRG.101792"; transcript_id "MSTRG.101792.1"; exon_number "1"; scaffold_541 StringTie exon 198496 198870 1000 + . gene_id "MSTRG.101792"; transcript_id "MSTRG.101792.1"; exon_number "2"; scaffold_541 StringTie exon 394772 394920 1000 - . gene_id "MSTRG.101812"; transcript_id "MSTRG.101812.1"; exon_number "1"; scaffold_541 StringTie exon 395175 395275 1000 - . gene_id "MSTRG.101812"; transcript_id "MSTRG.101812.1"; exon_number "2"; scaffold_541 StringTie exon 428283 428344 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "1"; scaffold_541 StringTie exon 437516 437621 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "2"; scaffold_541 StringTie exon 438398 438538 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "3"; scaffold_541 StringTie exon 438851 438889 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "4"; scaffold_541 StringTie exon 438993 439057 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "5"; scaffold_541 StringTie exon 439188 439244 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "6"; scaffold_541 StringTie exon 439508 439600 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "7"; scaffold_541 StringTie exon 440844 440877 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "8"; scaffold_541 StringTie exon 441214 441316 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "9"; scaffold_541 StringTie exon 442893 442920 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "10"; scaffold_541 StringTie exon 443283 443356 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "11"; scaffold_541 StringTie exon 443771 443846 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "12"; scaffold_541 StringTie exon 444256 444390 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "13"; scaffold_541 StringTie exon 444921 444962 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "14"; scaffold_541 StringTie exon 445312 445488 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "15"; scaffold_541 StringTie exon 445849 445938 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "16"; scaffold_541 StringTie exon 446425 446529 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "17"; scaffold_541 StringTie exon 448597 449179 1000 + . gene_id "MSTRG.101816"; transcript_id "MSTRG.101816.2"; exon_number "18"; scaffold_541 StringTie exon 522885 523316 1000 . . gene_id "MSTRG.101828"; transcript_id "MSTRG.101828.1"; exon_number "1"; scaffold_54104 StringTie exon 1316 2094 1000 . . gene_id "MSTRG.101842"; transcript_id "MSTRG.101842.1"; exon_number "1"; scaffold_54134 StringTie exon 1585 1879 1000 . . gene_id "MSTRG.101860"; transcript_id "MSTRG.101860.1"; exon_number "1"; scaffold_5416 StringTie exon 22663 22992 1000 . . gene_id "MSTRG.101883"; transcript_id "MSTRG.101883.1"; exon_number "1"; scaffold_54180 StringTie exon 66 225 1000 + . gene_id "MSTRG.101893"; transcript_id "MSTRG.101893.1"; exon_number "1"; scaffold_54180 StringTie exon 2506 2621 1000 + . gene_id "MSTRG.101893"; transcript_id "MSTRG.101893.1"; exon_number "2"; scaffold_54199 StringTie exon 2355 2573 1000 . . gene_id "MSTRG.101903"; transcript_id "MSTRG.101903.1"; exon_number "1"; scaffold_542 StringTie exon 65633 66108 1000 . . gene_id "MSTRG.101914"; transcript_id "MSTRG.101914.1"; exon_number "1"; scaffold_542 StringTie exon 311457 311598 1000 - . gene_id "MSTRG.101933"; transcript_id "MSTRG.101933.1"; exon_number "1"; scaffold_542 StringTie exon 312123 312218 1000 - . gene_id "MSTRG.101933"; transcript_id "MSTRG.101933.1"; exon_number "2"; scaffold_542 StringTie exon 312422 312552 1000 - . gene_id "MSTRG.101933"; transcript_id "MSTRG.101933.1"; exon_number "3"; scaffold_542 StringTie exon 312738 312797 1000 - . gene_id "MSTRG.101933"; transcript_id "MSTRG.101933.1"; exon_number "4"; scaffold_542 StringTie exon 608223 608682 1000 . . gene_id "MSTRG.101951"; transcript_id "MSTRG.101951.1"; exon_number "1"; scaffold_54225 StringTie exon 103 206 1000 - . gene_id "MSTRG.101986"; transcript_id "MSTRG.101986.1"; exon_number "1"; scaffold_54225 StringTie exon 776 834 1000 - . gene_id "MSTRG.101986"; transcript_id "MSTRG.101986.1"; exon_number "2"; scaffold_54225 StringTie exon 1075 1222 1000 - . gene_id "MSTRG.101986"; transcript_id "MSTRG.101986.1"; exon_number "3"; scaffold_54225 StringTie exon 1854 1957 1000 - . gene_id "MSTRG.101986"; transcript_id "MSTRG.101986.1"; exon_number "4"; scaffold_5423 StringTie exon 34059 34074 1000 + . gene_id "MSTRG.101993"; transcript_id "MSTRG.101993.1"; exon_number "1"; scaffold_5423 StringTie exon 35712 36017 1000 + . gene_id "MSTRG.101993"; transcript_id "MSTRG.101993.1"; exon_number "2"; scaffold_5426 StringTie exon 35139 35434 1000 . . gene_id "MSTRG.102018"; transcript_id "MSTRG.102018.1"; exon_number "1"; scaffold_5427 StringTie exon 28171 28273 1000 + . gene_id "MSTRG.102026"; transcript_id "MSTRG.102026.4"; exon_number "1"; scaffold_5427 StringTie exon 28466 28569 1000 + . gene_id "MSTRG.102026"; transcript_id "MSTRG.102026.4"; exon_number "2"; scaffold_5427 StringTie exon 29452 29550 1000 + . gene_id "MSTRG.102026"; transcript_id "MSTRG.102026.4"; exon_number "3"; scaffold_5427 StringTie exon 29692 29733 1000 + . gene_id "MSTRG.102026"; transcript_id "MSTRG.102026.4"; exon_number "4"; scaffold_5427 StringTie exon 33255 33326 1000 + . gene_id "MSTRG.102026"; transcript_id "MSTRG.102026.4"; exon_number "5"; scaffold_5427 StringTie exon 33438 33491 1000 + . gene_id "MSTRG.102026"; transcript_id "MSTRG.102026.4"; exon_number "6"; scaffold_5427 StringTie exon 33705 33819 1000 + . gene_id "MSTRG.102026"; transcript_id "MSTRG.102026.4"; exon_number "7"; scaffold_5427 StringTie exon 34068 34485 1000 + . gene_id "MSTRG.102026"; transcript_id "MSTRG.102026.4"; exon_number "8"; scaffold_54282 StringTie exon 1740 1969 1000 . . gene_id "MSTRG.102034"; transcript_id "MSTRG.102034.1"; exon_number "1"; scaffold_543 StringTie exon 574300 574542 1000 . . gene_id "MSTRG.102079"; transcript_id "MSTRG.102079.1"; exon_number "1"; scaffold_543 StringTie exon 661776 662012 1000 + . gene_id "MSTRG.102085"; transcript_id "MSTRG.102085.1"; exon_number "1"; scaffold_5430 StringTie exon 41712 41957 1000 . . gene_id "MSTRG.102087"; transcript_id "MSTRG.102087.1"; exon_number "1"; scaffold_5435 StringTie exon 41339 42280 1000 + . gene_id "MSTRG.102116"; transcript_id "MSTRG.102116.1"; exon_number "1"; scaffold_5437 StringTie exon 29294 29494 1000 - . gene_id "MSTRG.102126"; transcript_id "MSTRG.102126.1"; exon_number "1"; scaffold_5437 StringTie exon 33160 33369 1000 - . gene_id "MSTRG.102126"; transcript_id "MSTRG.102126.1"; exon_number "2"; scaffold_54398 StringTie exon 506 755 1000 . . gene_id "MSTRG.102138"; transcript_id "MSTRG.102138.1"; exon_number "1"; scaffold_544 StringTie exon 517805 518044 1000 . . gene_id "MSTRG.102169"; transcript_id "MSTRG.102169.1"; exon_number "1"; scaffold_544 StringTie exon 581192 581412 1000 . . gene_id "MSTRG.102173"; transcript_id "MSTRG.102173.1"; exon_number "1"; scaffold_5442 StringTie exon 8863 9130 1000 - . gene_id "MSTRG.102205"; transcript_id "MSTRG.102205.1"; exon_number "1"; scaffold_5443 StringTie exon 31259 31539 1000 . . gene_id "MSTRG.102211"; transcript_id "MSTRG.102211.1"; exon_number "1"; scaffold_54456 StringTie exon 21 375 1000 . . gene_id "MSTRG.102222"; transcript_id "MSTRG.102222.1"; exon_number "1"; scaffold_54495 StringTie exon 1631 2055 1000 . . gene_id "MSTRG.102241"; transcript_id "MSTRG.102241.1"; exon_number "1"; scaffold_545 StringTie exon 193220 193431 1000 . . gene_id "MSTRG.102256"; transcript_id "MSTRG.102256.1"; exon_number "1"; scaffold_545 StringTie exon 332492 332556 1000 + . gene_id "MSTRG.102277"; transcript_id "MSTRG.102277.1"; exon_number "1"; scaffold_545 StringTie exon 333535 333645 1000 + . gene_id "MSTRG.102277"; transcript_id "MSTRG.102277.1"; exon_number "2"; scaffold_545 StringTie exon 333753 333848 1000 + . gene_id "MSTRG.102277"; transcript_id "MSTRG.102277.1"; exon_number "3"; scaffold_545 StringTie exon 334060 334673 1000 + . gene_id "MSTRG.102277"; transcript_id "MSTRG.102277.1"; exon_number "4"; scaffold_545 StringTie exon 435142 435396 1000 . . gene_id "MSTRG.102282"; transcript_id "MSTRG.102282.1"; exon_number "1"; scaffold_545 StringTie exon 698900 699105 1000 . . gene_id "MSTRG.102291"; transcript_id "MSTRG.102291.1"; exon_number "1"; scaffold_54505 StringTie exon 157 851 1000 . . gene_id "MSTRG.102298"; transcript_id "MSTRG.102298.1"; exon_number "1"; scaffold_5453 StringTie exon 38393 38828 1000 . . gene_id "MSTRG.102316"; transcript_id "MSTRG.102316.1"; exon_number "1"; scaffold_5456 StringTie exon 7385 7647 1000 . . gene_id "MSTRG.102330"; transcript_id "MSTRG.102330.1"; exon_number "1"; scaffold_54584 StringTie exon 819 1163 1000 . . gene_id "MSTRG.102347"; transcript_id "MSTRG.102347.1"; exon_number "1"; scaffold_546 StringTie exon 20824 21032 1000 . . gene_id "MSTRG.102357"; transcript_id "MSTRG.102357.1"; exon_number "1"; scaffold_546 StringTie exon 80621 80826 1000 + . gene_id "MSTRG.102360"; transcript_id "MSTRG.102360.1"; exon_number "1"; scaffold_546 StringTie exon 518816 519115 1000 . . gene_id "MSTRG.102373"; transcript_id "MSTRG.102373.1"; exon_number "1"; scaffold_546 StringTie exon 567061 567446 1000 + . gene_id "MSTRG.102374"; transcript_id "MSTRG.102374.1"; exon_number "1"; scaffold_546 StringTie exon 581226 581400 1000 + . gene_id "MSTRG.102374"; transcript_id "MSTRG.102374.1"; exon_number "2"; scaffold_546 StringTie exon 583208 583364 1000 + . gene_id "MSTRG.102374"; transcript_id "MSTRG.102374.1"; exon_number "3"; scaffold_546 StringTie exon 587759 587856 1000 + . gene_id "MSTRG.102374"; transcript_id "MSTRG.102374.1"; exon_number "4"; scaffold_5463 StringTie exon 36823 37072 1000 . . gene_id "MSTRG.102390"; transcript_id "MSTRG.102390.1"; exon_number "1"; scaffold_5464 StringTie exon 17 239 1000 . . gene_id "MSTRG.102396"; transcript_id "MSTRG.102396.1"; exon_number "1"; scaffold_54661 StringTie exon 1861 2239 1000 . . gene_id "MSTRG.102412"; transcript_id "MSTRG.102412.1"; exon_number "1"; scaffold_547 StringTie exon 229154 229497 1000 . . gene_id "MSTRG.102454"; transcript_id "MSTRG.102454.1"; exon_number "1"; scaffold_54708 StringTie exon 1293 1429 1000 - . gene_id "MSTRG.102482"; transcript_id "MSTRG.102482.1"; exon_number "1"; scaffold_54708 StringTie exon 1764 1873 1000 - . gene_id "MSTRG.102482"; transcript_id "MSTRG.102482.1"; exon_number "2"; scaffold_54708 StringTie exon 2270 2580 1000 - . gene_id "MSTRG.102482"; transcript_id "MSTRG.102482.1"; exon_number "3"; scaffold_54753 StringTie exon 2076 2457 1000 . . gene_id "MSTRG.102511"; transcript_id "MSTRG.102511.1"; exon_number "1"; scaffold_5476 StringTie exon 32632 32876 1000 . . gene_id "MSTRG.102522"; transcript_id "MSTRG.102522.1"; exon_number "1"; scaffold_54763 StringTie exon 1634 2018 1000 . . gene_id "MSTRG.102527"; transcript_id "MSTRG.102527.1"; exon_number "1"; scaffold_548 StringTie exon 275988 276184 1000 + . gene_id "MSTRG.102581"; transcript_id "MSTRG.102581.1"; exon_number "1"; scaffold_548 StringTie exon 276306 276405 1000 + . gene_id "MSTRG.102581"; transcript_id "MSTRG.102581.1"; exon_number "2"; scaffold_548 StringTie exon 294051 294341 1000 + . gene_id "MSTRG.102581"; transcript_id "MSTRG.102581.1"; exon_number "3"; scaffold_548 StringTie exon 294645 294742 1000 + . gene_id "MSTRG.102581"; transcript_id "MSTRG.102581.1"; exon_number "4"; scaffold_548 StringTie exon 296429 296494 1000 + . gene_id "MSTRG.102581"; transcript_id "MSTRG.102581.1"; exon_number "5"; scaffold_548 StringTie exon 461456 461616 1000 - . gene_id "MSTRG.102593"; transcript_id "MSTRG.102593.1"; exon_number "1"; scaffold_548 StringTie exon 463851 463930 1000 - . gene_id "MSTRG.102593"; transcript_id "MSTRG.102593.1"; exon_number "2"; scaffold_548 StringTie exon 472820 472861 1000 - . gene_id "MSTRG.102593"; transcript_id "MSTRG.102593.1"; exon_number "3"; scaffold_548 StringTie exon 473440 473482 1000 - . gene_id "MSTRG.102593"; transcript_id "MSTRG.102593.1"; exon_number "4"; scaffold_548 StringTie exon 479829 479978 1000 - . gene_id "MSTRG.102593"; transcript_id "MSTRG.102593.1"; exon_number "5"; scaffold_548 StringTie exon 506913 507299 1000 - . gene_id "MSTRG.102593"; transcript_id "MSTRG.102593.1"; exon_number "6"; scaffold_548 StringTie exon 655254 655594 1000 . . gene_id "MSTRG.102599"; transcript_id "MSTRG.102599.1"; exon_number "1"; scaffold_548 StringTie exon 671287 671600 1000 . . gene_id "MSTRG.102601"; transcript_id "MSTRG.102601.1"; exon_number "1"; scaffold_5481 StringTie exon 32774 33082 1000 . . gene_id "MSTRG.102610"; transcript_id "MSTRG.102610.1"; exon_number "1"; scaffold_54814 StringTie exon 42 1699 1000 . . gene_id "MSTRG.102615"; transcript_id "MSTRG.102615.1"; exon_number "1"; scaffold_5482 StringTie exon 17668 17945 1000 . . gene_id "MSTRG.102620"; transcript_id "MSTRG.102620.1"; exon_number "1"; scaffold_5483 StringTie exon 3860 4612 1000 . . gene_id "MSTRG.102627"; transcript_id "MSTRG.102627.1"; exon_number "1"; scaffold_5483 StringTie exon 25499 26031 1000 - . gene_id "MSTRG.102629"; transcript_id "MSTRG.102629.1"; exon_number "1"; scaffold_54851 StringTie exon 2335 2581 1000 . . gene_id "MSTRG.102642"; transcript_id "MSTRG.102642.1"; exon_number "1"; scaffold_549 StringTie exon 485631 485870 1000 . . gene_id "MSTRG.102701"; transcript_id "MSTRG.102701.1"; exon_number "1"; scaffold_549 StringTie exon 604782 605055 1000 . . gene_id "MSTRG.102713"; transcript_id "MSTRG.102713.1"; exon_number "1"; scaffold_54904 StringTie exon 13 94 1000 - . gene_id "MSTRG.102721"; transcript_id "MSTRG.102721.1"; exon_number "1"; scaffold_54904 StringTie exon 246 352 1000 - . gene_id "MSTRG.102721"; transcript_id "MSTRG.102721.1"; exon_number "2"; scaffold_54904 StringTie exon 476 557 1000 - . gene_id "MSTRG.102721"; transcript_id "MSTRG.102721.1"; exon_number "3"; scaffold_54904 StringTie exon 658 743 1000 - . gene_id "MSTRG.102721"; transcript_id "MSTRG.102721.1"; exon_number "4"; scaffold_54904 StringTie exon 943 1110 1000 - . gene_id "MSTRG.102721"; transcript_id "MSTRG.102721.1"; exon_number "5"; scaffold_54904 StringTie exon 1207 1293 1000 - . gene_id "MSTRG.102721"; transcript_id "MSTRG.102721.1"; exon_number "6"; scaffold_54904 StringTie exon 1399 1485 1000 - . gene_id "MSTRG.102721"; transcript_id "MSTRG.102721.1"; exon_number "7"; scaffold_54904 StringTie exon 1602 1684 1000 - . gene_id "MSTRG.102721"; transcript_id "MSTRG.102721.1"; exon_number "8"; scaffold_54916 StringTie exon 1 243 1000 . . gene_id "MSTRG.102729"; transcript_id "MSTRG.102729.1"; exon_number "1"; scaffold_54969 StringTie exon 453 1139 1000 . . gene_id "MSTRG.102769"; transcript_id "MSTRG.102769.1"; exon_number "1"; scaffold_55 StringTie exon 244230 244462 1000 . . gene_id "MSTRG.102796"; transcript_id "MSTRG.102796.1"; exon_number "1"; scaffold_55 StringTie exon 259832 260003 1000 + . gene_id "MSTRG.102801"; transcript_id "MSTRG.102801.2"; exon_number "1"; scaffold_55 StringTie exon 264459 264613 1000 + . gene_id "MSTRG.102801"; transcript_id "MSTRG.102801.2"; exon_number "2"; scaffold_55 StringTie exon 265589 265731 1000 + . gene_id "MSTRG.102801"; transcript_id "MSTRG.102801.2"; exon_number "3"; scaffold_55 StringTie exon 266025 266116 1000 + . gene_id "MSTRG.102801"; transcript_id "MSTRG.102801.2"; exon_number "4"; scaffold_55 StringTie exon 266372 266475 1000 + . gene_id "MSTRG.102801"; transcript_id "MSTRG.102801.2"; exon_number "5"; scaffold_55 StringTie exon 276981 277216 1000 . . gene_id "MSTRG.102804"; transcript_id "MSTRG.102804.1"; exon_number "1"; scaffold_55 StringTie exon 279106 283199 1000 - . gene_id "MSTRG.102805"; transcript_id "MSTRG.102805.1"; exon_number "1"; scaffold_55 StringTie exon 394379 394583 1000 . . gene_id "MSTRG.102818"; transcript_id "MSTRG.102818.1"; exon_number "1"; scaffold_55 StringTie exon 486521 486722 1000 . . gene_id "MSTRG.102821"; transcript_id "MSTRG.102821.1"; exon_number "1"; scaffold_55 StringTie exon 653025 653734 1000 . . gene_id "MSTRG.102832"; transcript_id "MSTRG.102832.1"; exon_number "1"; scaffold_55 StringTie exon 1056364 1056743 1000 . . gene_id "MSTRG.102853"; transcript_id "MSTRG.102853.1"; exon_number "1"; scaffold_55 StringTie exon 1172859 1173233 1000 . . gene_id "MSTRG.102859"; transcript_id "MSTRG.102859.1"; exon_number "1"; scaffold_55 StringTie exon 1519915 1522515 1000 . . gene_id "MSTRG.102883"; transcript_id "MSTRG.102883.1"; exon_number "1"; scaffold_55 StringTie exon 1635091 1635786 1000 . . gene_id "MSTRG.102895"; transcript_id "MSTRG.102895.1"; exon_number "1"; scaffold_55 StringTie exon 1636059 1636321 1000 . . gene_id "MSTRG.102896"; transcript_id "MSTRG.102896.1"; exon_number "1"; scaffold_55 StringTie exon 1654930 1655068 1000 - . gene_id "MSTRG.102899"; transcript_id "MSTRG.102899.1"; exon_number "1"; scaffold_55 StringTie exon 1655228 1655307 1000 - . gene_id "MSTRG.102899"; transcript_id "MSTRG.102899.1"; exon_number "2"; scaffold_55 StringTie exon 1655520 1655583 1000 - . gene_id "MSTRG.102899"; transcript_id "MSTRG.102899.1"; exon_number "3"; scaffold_55 StringTie exon 1725591 1725896 1000 - . gene_id "MSTRG.102909"; transcript_id "MSTRG.102909.1"; exon_number "1"; scaffold_55 StringTie exon 1726284 1726300 1000 - . gene_id "MSTRG.102909"; transcript_id "MSTRG.102909.1"; exon_number "2"; scaffold_55 StringTie exon 1791038 1791238 1000 . . gene_id "MSTRG.102914"; transcript_id "MSTRG.102914.1"; exon_number "1"; scaffold_55 StringTie exon 1812958 1813161 1000 . . gene_id "MSTRG.102916"; transcript_id "MSTRG.102916.1"; exon_number "1"; scaffold_55 StringTie exon 1832957 1833965 1000 . . gene_id "MSTRG.102922"; transcript_id "MSTRG.102922.1"; exon_number "1"; scaffold_55 StringTie exon 1850749 1851207 1000 - . gene_id "MSTRG.102926"; transcript_id "MSTRG.102926.1"; exon_number "1"; scaffold_55 StringTie exon 1851400 1851453 1000 - . gene_id "MSTRG.102926"; transcript_id "MSTRG.102926.1"; exon_number "2"; scaffold_55 StringTie exon 1851576 1851736 1000 - . gene_id "MSTRG.102926"; transcript_id "MSTRG.102926.1"; exon_number "3"; scaffold_55 StringTie exon 1851842 1851941 1000 - . gene_id "MSTRG.102926"; transcript_id "MSTRG.102926.1"; exon_number "4"; scaffold_55 StringTie exon 1878398 1878750 1000 . . gene_id "MSTRG.102933"; transcript_id "MSTRG.102933.1"; exon_number "1"; scaffold_55 StringTie exon 1882204 1882245 1000 + . gene_id "MSTRG.102935"; transcript_id "MSTRG.102935.1"; exon_number "1"; scaffold_55 StringTie exon 1882345 1882416 1000 + . gene_id "MSTRG.102935"; transcript_id "MSTRG.102935.1"; exon_number "2"; scaffold_55 StringTie exon 1883086 1883348 1000 + . gene_id "MSTRG.102935"; transcript_id "MSTRG.102935.1"; exon_number "3"; scaffold_55 StringTie exon 1883398 1883741 1000 . . gene_id "MSTRG.102936"; transcript_id "MSTRG.102936.1"; exon_number "1"; scaffold_55 StringTie exon 2103527 2105107 1000 . . gene_id "MSTRG.102949"; transcript_id "MSTRG.102949.1"; exon_number "1"; scaffold_550 StringTie exon 586809 587741 1000 . . gene_id "MSTRG.102989"; transcript_id "MSTRG.102989.1"; exon_number "1"; scaffold_550 StringTie exon 635372 635703 1000 . . gene_id "MSTRG.102996"; transcript_id "MSTRG.102996.1"; exon_number "1"; scaffold_5502 StringTie exon 31703 32102 1000 . . gene_id "MSTRG.103009"; transcript_id "MSTRG.103009.1"; exon_number "1"; scaffold_55020 StringTie exon 73 888 1000 . . gene_id "MSTRG.103011"; transcript_id "MSTRG.103011.1"; exon_number "1"; scaffold_55025 StringTie exon 228 508 1000 . . gene_id "MSTRG.103015"; transcript_id "MSTRG.103015.1"; exon_number "1"; scaffold_5504 StringTie exon 25265 25598 1000 . . gene_id "MSTRG.103027"; transcript_id "MSTRG.103027.1"; exon_number "1"; scaffold_55044 StringTie exon 2016 2374 1000 . . gene_id "MSTRG.103033"; transcript_id "MSTRG.103033.1"; exon_number "1"; scaffold_5505 StringTie exon 862 1246 1000 + . gene_id "MSTRG.103036"; transcript_id "MSTRG.103036.1"; exon_number "1"; scaffold_5505 StringTie exon 1869 4836 1000 + . gene_id "MSTRG.103036"; transcript_id "MSTRG.103036.1"; exon_number "2"; scaffold_5505 StringTie exon 7801 7810 1000 - . gene_id "MSTRG.103039"; transcript_id "MSTRG.103039.1"; exon_number "1"; scaffold_5505 StringTie exon 7906 7962 1000 - . gene_id "MSTRG.103039"; transcript_id "MSTRG.103039.1"; exon_number "2"; scaffold_5505 StringTie exon 8247 8309 1000 - . gene_id "MSTRG.103039"; transcript_id "MSTRG.103039.1"; exon_number "3"; scaffold_5505 StringTie exon 8817 8891 1000 - . gene_id "MSTRG.103039"; transcript_id "MSTRG.103039.1"; exon_number "4"; scaffold_5505 StringTie exon 9346 9402 1000 - . gene_id "MSTRG.103039"; transcript_id "MSTRG.103039.1"; exon_number "5"; scaffold_551 StringTie exon 70955 71281 1000 . . gene_id "MSTRG.103081"; transcript_id "MSTRG.103081.1"; exon_number "1"; scaffold_551 StringTie exon 543897 544121 1000 . . gene_id "MSTRG.103113"; transcript_id "MSTRG.103113.1"; exon_number "1"; scaffold_551 StringTie exon 569376 569686 1000 . . gene_id "MSTRG.103114"; transcript_id "MSTRG.103114.1"; exon_number "1"; scaffold_55106 StringTie exon 571 1636 1000 . . gene_id "MSTRG.103130"; transcript_id "MSTRG.103130.1"; exon_number "1"; scaffold_5511 StringTie exon 13482 13607 1000 - . gene_id "MSTRG.103135"; transcript_id "MSTRG.103135.1"; exon_number "1"; scaffold_5511 StringTie exon 17414 17457 1000 - . gene_id "MSTRG.103135"; transcript_id "MSTRG.103135.1"; exon_number "2"; scaffold_5511 StringTie exon 17589 17717 1000 - . gene_id "MSTRG.103135"; transcript_id "MSTRG.103135.1"; exon_number "3"; scaffold_5511 StringTie exon 21373 21449 1000 - . gene_id "MSTRG.103135"; transcript_id "MSTRG.103135.1"; exon_number "4"; scaffold_5511 StringTie exon 21799 21865 1000 - . gene_id "MSTRG.103135"; transcript_id "MSTRG.103135.1"; exon_number "5"; scaffold_5511 StringTie exon 22514 22577 1000 - . gene_id "MSTRG.103135"; transcript_id "MSTRG.103135.1"; exon_number "6"; scaffold_5511 StringTie exon 23569 23660 1000 - . gene_id "MSTRG.103135"; transcript_id "MSTRG.103135.1"; exon_number "7"; scaffold_5511 StringTie exon 24047 24154 1000 - . gene_id "MSTRG.103135"; transcript_id "MSTRG.103135.1"; exon_number "8"; scaffold_5512 StringTie exon 2451 2662 1000 + . gene_id "MSTRG.103139"; transcript_id "MSTRG.103139.1"; exon_number "1"; scaffold_5512 StringTie exon 2909 3097 1000 + . gene_id "MSTRG.103139"; transcript_id "MSTRG.103139.1"; exon_number "2"; scaffold_5512 StringTie exon 3310 3382 1000 + . gene_id "MSTRG.103139"; transcript_id "MSTRG.103139.1"; exon_number "3"; scaffold_5512 StringTie exon 3538 3817 1000 + . gene_id "MSTRG.103139"; transcript_id "MSTRG.103139.1"; exon_number "4"; scaffold_5512 StringTie exon 3988 5383 1000 + . gene_id "MSTRG.103139"; transcript_id "MSTRG.103139.1"; exon_number "5"; scaffold_5519 StringTie exon 41516 41749 1000 . . gene_id "MSTRG.103190"; transcript_id "MSTRG.103190.1"; exon_number "1"; scaffold_552 StringTie exon 26633 26741 1000 + . gene_id "MSTRG.103196"; transcript_id "MSTRG.103196.1"; exon_number "1"; scaffold_552 StringTie exon 33642 33726 1000 + . gene_id "MSTRG.103196"; transcript_id "MSTRG.103196.1"; exon_number "2"; scaffold_552 StringTie exon 33832 33873 1000 + . gene_id "MSTRG.103196"; transcript_id "MSTRG.103196.1"; exon_number "3"; scaffold_552 StringTie exon 35885 35905 1000 + . gene_id "MSTRG.103196"; transcript_id "MSTRG.103196.1"; exon_number "4"; scaffold_552 StringTie exon 315683 316029 1000 . . gene_id "MSTRG.103230"; transcript_id "MSTRG.103230.1"; exon_number "1"; scaffold_552 StringTie exon 522740 522961 1000 . . gene_id "MSTRG.103236"; transcript_id "MSTRG.103236.1"; exon_number "1"; scaffold_552 StringTie exon 586227 586443 1000 . . gene_id "MSTRG.103239"; transcript_id "MSTRG.103239.1"; exon_number "1"; scaffold_5524 StringTie exon 40390 40765 1000 . . gene_id "MSTRG.103279"; transcript_id "MSTRG.103279.1"; exon_number "1"; scaffold_55243 StringTie exon 1075 1731 1000 - . gene_id "MSTRG.103280"; transcript_id "MSTRG.103280.1"; exon_number "1"; scaffold_5525 StringTie exon 1755 2065 1000 . . gene_id "MSTRG.103285"; transcript_id "MSTRG.103285.1"; exon_number "1"; scaffold_55262 StringTie exon 211 339 1000 + . gene_id "MSTRG.103292"; transcript_id "MSTRG.103292.1"; exon_number "1"; scaffold_55262 StringTie exon 675 760 1000 + . gene_id "MSTRG.103292"; transcript_id "MSTRG.103292.1"; exon_number "2"; scaffold_55262 StringTie exon 873 1008 1000 + . gene_id "MSTRG.103292"; transcript_id "MSTRG.103292.1"; exon_number "3"; scaffold_55262 StringTie exon 2478 2546 1000 + . gene_id "MSTRG.103292"; transcript_id "MSTRG.103292.1"; exon_number "4"; scaffold_55288 StringTie exon 293 506 1000 + . gene_id "MSTRG.103302"; transcript_id "MSTRG.103302.1"; exon_number "1"; scaffold_55288 StringTie exon 1800 1901 1000 + . gene_id "MSTRG.103302"; transcript_id "MSTRG.103302.1"; exon_number "2"; scaffold_55288 StringTie exon 2040 2294 1000 + . gene_id "MSTRG.103302"; transcript_id "MSTRG.103302.1"; exon_number "3"; scaffold_5529 StringTie exon 14503 14768 1000 . . gene_id "MSTRG.103306"; transcript_id "MSTRG.103306.1"; exon_number "1"; scaffold_553 StringTie exon 161887 162152 1000 . . gene_id "MSTRG.103336"; transcript_id "MSTRG.103336.1"; exon_number "1"; scaffold_553 StringTie exon 226395 226704 1000 - . gene_id "MSTRG.103341"; transcript_id "MSTRG.103341.1"; exon_number "1"; scaffold_553 StringTie exon 226822 226946 1000 - . gene_id "MSTRG.103341"; transcript_id "MSTRG.103341.1"; exon_number "2"; scaffold_553 StringTie exon 597393 597658 1000 + . gene_id "MSTRG.103364"; transcript_id "MSTRG.103364.1"; exon_number "1"; scaffold_5533 StringTie exon 17846 18111 1000 . . gene_id "MSTRG.103393"; transcript_id "MSTRG.103393.1"; exon_number "1"; scaffold_5534 StringTie exon 1396 1614 1000 . . gene_id "MSTRG.103402"; transcript_id "MSTRG.103402.1"; exon_number "1"; scaffold_55385 StringTie exon 431 656 1000 . . gene_id "MSTRG.103435"; transcript_id "MSTRG.103435.1"; exon_number "1"; scaffold_554 StringTie exon 7562 8065 1000 . . gene_id "MSTRG.103447"; transcript_id "MSTRG.103447.1"; exon_number "1"; scaffold_554 StringTie exon 144797 145216 1000 . . gene_id "MSTRG.103452"; transcript_id "MSTRG.103452.1"; exon_number "1"; scaffold_554 StringTie exon 149166 149389 1000 . . gene_id "MSTRG.103453"; transcript_id "MSTRG.103453.1"; exon_number "1"; scaffold_554 StringTie exon 186222 186566 1000 . . gene_id "MSTRG.103459"; transcript_id "MSTRG.103459.1"; exon_number "1"; scaffold_554 StringTie exon 458626 458756 1000 + . gene_id "MSTRG.103478"; transcript_id "MSTRG.103478.1"; exon_number "1"; scaffold_554 StringTie exon 459622 459746 1000 + . gene_id "MSTRG.103478"; transcript_id "MSTRG.103478.1"; exon_number "2"; scaffold_554 StringTie exon 462219 462336 1000 + . gene_id "MSTRG.103478"; transcript_id "MSTRG.103478.1"; exon_number "3"; scaffold_554 StringTie exon 462715 463171 1000 + . gene_id "MSTRG.103478"; transcript_id "MSTRG.103478.1"; exon_number "4"; scaffold_554 StringTie exon 463985 464048 1000 + . gene_id "MSTRG.103478"; transcript_id "MSTRG.103478.1"; exon_number "5"; scaffold_554 StringTie exon 473165 473327 1000 + . gene_id "MSTRG.103478"; transcript_id "MSTRG.103478.1"; exon_number "6"; scaffold_554 StringTie exon 500635 502455 1000 - . gene_id "MSTRG.103484"; transcript_id "MSTRG.103484.1"; exon_number "1"; scaffold_554 StringTie exon 502541 502666 1000 - . gene_id "MSTRG.103484"; transcript_id "MSTRG.103484.1"; exon_number "2"; scaffold_554 StringTie exon 507238 507309 1000 - . gene_id "MSTRG.103484"; transcript_id "MSTRG.103484.1"; exon_number "3"; scaffold_554 StringTie exon 507440 507549 1000 - . gene_id "MSTRG.103484"; transcript_id "MSTRG.103484.1"; exon_number "4"; scaffold_554 StringTie exon 508278 508358 1000 - . gene_id "MSTRG.103484"; transcript_id "MSTRG.103484.1"; exon_number "5"; scaffold_554 StringTie exon 508973 509183 1000 - . gene_id "MSTRG.103484"; transcript_id "MSTRG.103484.1"; exon_number "6"; scaffold_554 StringTie exon 584725 584978 1000 . . gene_id "MSTRG.103495"; transcript_id "MSTRG.103495.1"; exon_number "1"; scaffold_554 StringTie exon 672664 673015 1000 . . gene_id "MSTRG.103510"; transcript_id "MSTRG.103510.1"; exon_number "1"; scaffold_5544 StringTie exon 8612 8851 1000 + . gene_id "MSTRG.103536"; transcript_id "MSTRG.103536.1"; exon_number "1"; scaffold_5544 StringTie exon 9032 9052 1000 + . gene_id "MSTRG.103536"; transcript_id "MSTRG.103536.1"; exon_number "2"; scaffold_5546 StringTie exon 40201 40447 1000 . . gene_id "MSTRG.103548"; transcript_id "MSTRG.103548.1"; exon_number "1"; scaffold_55498 StringTie exon 627 1120 1000 . . gene_id "MSTRG.103564"; transcript_id "MSTRG.103564.1"; exon_number "1"; scaffold_555 StringTie exon 204438 204722 1000 . . gene_id "MSTRG.103581"; transcript_id "MSTRG.103581.1"; exon_number "1"; scaffold_555 StringTie exon 262390 262649 1000 . . gene_id "MSTRG.103587"; transcript_id "MSTRG.103587.1"; exon_number "1"; scaffold_555 StringTie exon 310310 310546 1000 . . gene_id "MSTRG.103589"; transcript_id "MSTRG.103589.1"; exon_number "1"; scaffold_555 StringTie exon 452137 452317 1000 + . gene_id "MSTRG.103595"; transcript_id "MSTRG.103595.1"; exon_number "1"; scaffold_555 StringTie exon 459288 459414 1000 + . gene_id "MSTRG.103595"; transcript_id "MSTRG.103595.1"; exon_number "2"; scaffold_555 StringTie exon 459602 459738 1000 + . gene_id "MSTRG.103595"; transcript_id "MSTRG.103595.1"; exon_number "3"; scaffold_5552 StringTie exon 40465 40763 1000 . . gene_id "MSTRG.103615"; transcript_id "MSTRG.103615.1"; exon_number "1"; scaffold_5554 StringTie exon 10338 10657 1000 . . gene_id "MSTRG.103628"; transcript_id "MSTRG.103628.1"; exon_number "1"; scaffold_55545 StringTie exon 1797 2087 1000 . . gene_id "MSTRG.103630"; transcript_id "MSTRG.103630.1"; exon_number "1"; scaffold_5559 StringTie exon 1299 1603 1000 . . gene_id "MSTRG.103661"; transcript_id "MSTRG.103661.1"; exon_number "1"; scaffold_5562 StringTie exon 11485 11832 1000 . . gene_id "MSTRG.103748"; transcript_id "MSTRG.103748.1"; exon_number "1"; scaffold_5565 StringTie exon 15821 16315 1000 . . gene_id "MSTRG.103771"; transcript_id "MSTRG.103771.1"; exon_number "1"; scaffold_55684 StringTie exon 3 226 1000 . . gene_id "MSTRG.103795"; transcript_id "MSTRG.103795.1"; exon_number "1"; scaffold_55691 StringTie exon 533 922 1000 . . gene_id "MSTRG.103806"; transcript_id "MSTRG.103806.1"; exon_number "1"; scaffold_55696 StringTie exon 25 274 1000 + . gene_id "MSTRG.103807"; transcript_id "MSTRG.103807.1"; exon_number "1"; scaffold_557 StringTie exon 78940 79215 1000 . . gene_id "MSTRG.103812"; transcript_id "MSTRG.103812.1"; exon_number "1"; scaffold_557 StringTie exon 99164 99463 1000 . . gene_id "MSTRG.103813"; transcript_id "MSTRG.103813.1"; exon_number "1"; scaffold_5571 StringTie exon 41397 41588 1000 - . gene_id "MSTRG.103847"; transcript_id "MSTRG.103847.2"; exon_number "1"; scaffold_5571 StringTie exon 41764 41874 1000 - . gene_id "MSTRG.103847"; transcript_id "MSTRG.103847.2"; exon_number "2"; scaffold_55723 StringTie exon 6 334 1000 . . gene_id "MSTRG.103858"; transcript_id "MSTRG.103858.1"; exon_number "1"; scaffold_5574 StringTie exon 40059 40325 1000 . . gene_id "MSTRG.103868"; transcript_id "MSTRG.103868.1"; exon_number "1"; scaffold_5578 StringTie exon 11961 12211 1000 . . gene_id "MSTRG.103894"; transcript_id "MSTRG.103894.1"; exon_number "1"; scaffold_5579 StringTie exon 33477 33518 1000 + . gene_id "MSTRG.103906"; transcript_id "MSTRG.103906.1"; exon_number "1"; scaffold_5579 StringTie exon 33729 33842 1000 + . gene_id "MSTRG.103906"; transcript_id "MSTRG.103906.1"; exon_number "2"; scaffold_5579 StringTie exon 34127 34280 1000 + . gene_id "MSTRG.103906"; transcript_id "MSTRG.103906.1"; exon_number "3"; scaffold_5579 StringTie exon 34458 34545 1000 + . gene_id "MSTRG.103906"; transcript_id "MSTRG.103906.1"; exon_number "4"; scaffold_5579 StringTie exon 34785 34843 1000 + . gene_id "MSTRG.103906"; transcript_id "MSTRG.103906.1"; exon_number "5"; scaffold_5579 StringTie exon 34987 35081 1000 + . gene_id "MSTRG.103906"; transcript_id "MSTRG.103906.1"; exon_number "6"; scaffold_5579 StringTie exon 35299 35427 1000 + . gene_id "MSTRG.103906"; transcript_id "MSTRG.103906.1"; exon_number "7"; scaffold_5579 StringTie exon 35984 36358 1000 + . gene_id "MSTRG.103906"; transcript_id "MSTRG.103906.1"; exon_number "8"; scaffold_558 StringTie exon 492499 493195 1000 . . gene_id "MSTRG.103934"; transcript_id "MSTRG.103934.1"; exon_number "1"; scaffold_558 StringTie exon 542987 543260 1000 . . gene_id "MSTRG.103941"; transcript_id "MSTRG.103941.1"; exon_number "1"; scaffold_5580 StringTie exon 25177 26469 1000 . . gene_id "MSTRG.103953"; transcript_id "MSTRG.103953.1"; exon_number "1"; scaffold_55806 StringTie exon 183 1153 1000 . . gene_id "MSTRG.103958"; transcript_id "MSTRG.103958.1"; exon_number "1"; scaffold_5589 StringTie exon 32389 32663 1000 . . gene_id "MSTRG.104017"; transcript_id "MSTRG.104017.1"; exon_number "1"; scaffold_55897 StringTie exon 842 1188 1000 . . gene_id "MSTRG.104019"; transcript_id "MSTRG.104019.1"; exon_number "1"; scaffold_559 StringTie exon 20172 20355 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "1"; scaffold_559 StringTie exon 20546 20683 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "2"; scaffold_559 StringTie exon 20862 21037 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "3"; scaffold_559 StringTie exon 22048 22132 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "4"; scaffold_559 StringTie exon 23867 24011 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "5"; scaffold_559 StringTie exon 24837 24975 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "6"; scaffold_559 StringTie exon 25332 25423 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "7"; scaffold_559 StringTie exon 30459 30618 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "8"; scaffold_559 StringTie exon 32725 32794 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "9"; scaffold_559 StringTie exon 33031 33119 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "10"; scaffold_559 StringTie exon 33295 33343 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "11"; scaffold_559 StringTie exon 33501 33636 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "12"; scaffold_559 StringTie exon 35822 35899 1000 + . gene_id "MSTRG.104020"; transcript_id "MSTRG.104020.1"; exon_number "13"; scaffold_559 StringTie exon 242293 242339 1000 + . gene_id "MSTRG.104040"; transcript_id "MSTRG.104040.1"; exon_number "1"; scaffold_559 StringTie exon 245033 245105 1000 + . gene_id "MSTRG.104040"; transcript_id "MSTRG.104040.1"; exon_number "2"; scaffold_559 StringTie exon 245447 245504 1000 + . gene_id "MSTRG.104040"; transcript_id "MSTRG.104040.1"; exon_number "3"; scaffold_559 StringTie exon 249941 250043 1000 + . gene_id "MSTRG.104040"; transcript_id "MSTRG.104040.1"; exon_number "4"; scaffold_559 StringTie exon 334802 335097 1000 . . gene_id "MSTRG.104044"; transcript_id "MSTRG.104044.1"; exon_number "1"; scaffold_55905 StringTie exon 2133 2353 1000 . . gene_id "MSTRG.104075"; transcript_id "MSTRG.104075.1"; exon_number "1"; scaffold_56 StringTie exon 463901 464372 1000 . . gene_id "MSTRG.104134"; transcript_id "MSTRG.104134.1"; exon_number "1"; scaffold_56 StringTie exon 1128252 1128457 1000 . . gene_id "MSTRG.104167"; transcript_id "MSTRG.104167.1"; exon_number "1"; scaffold_56 StringTie exon 1323250 1323538 1000 . . gene_id "MSTRG.104196"; transcript_id "MSTRG.104196.1"; exon_number "1"; scaffold_56 StringTie exon 1682321 1682679 1000 . . gene_id "MSTRG.104212"; transcript_id "MSTRG.104212.1"; exon_number "1"; scaffold_56 StringTie exon 1977685 1978060 1000 . . gene_id "MSTRG.104237"; transcript_id "MSTRG.104237.1"; exon_number "1"; scaffold_560 StringTie exon 81859 82675 1000 . . gene_id "MSTRG.104260"; transcript_id "MSTRG.104260.1"; exon_number "1"; scaffold_560 StringTie exon 208396 208564 1000 + . gene_id "MSTRG.104267"; transcript_id "MSTRG.104267.1"; exon_number "1"; scaffold_560 StringTie exon 210466 210626 1000 + . gene_id "MSTRG.104267"; transcript_id "MSTRG.104267.1"; exon_number "2"; scaffold_560 StringTie exon 211380 211452 1000 + . gene_id "MSTRG.104267"; transcript_id "MSTRG.104267.1"; exon_number "3"; scaffold_560 StringTie exon 214612 214707 1000 + . gene_id "MSTRG.104268"; transcript_id "MSTRG.104268.1"; exon_number "1"; scaffold_560 StringTie exon 215377 215547 1000 + . gene_id "MSTRG.104268"; transcript_id "MSTRG.104268.1"; exon_number "2"; scaffold_560 StringTie exon 215990 216099 1000 + . gene_id "MSTRG.104268"; transcript_id "MSTRG.104268.1"; exon_number "3"; scaffold_560 StringTie exon 627383 627599 1000 . . gene_id "MSTRG.104296"; transcript_id "MSTRG.104296.1"; exon_number "1"; scaffold_56007 StringTie exon 1244 1479 1000 . . gene_id "MSTRG.104308"; transcript_id "MSTRG.104308.1"; exon_number "1"; scaffold_5607 StringTie exon 35297 35498 1000 - . gene_id "MSTRG.104339"; transcript_id "MSTRG.104339.1"; exon_number "1"; scaffold_561 StringTie exon 308144 308689 1000 . . gene_id "MSTRG.104387"; transcript_id "MSTRG.104387.1"; exon_number "1"; scaffold_561 StringTie exon 586861 587153 1000 . . gene_id "MSTRG.104412"; transcript_id "MSTRG.104412.1"; exon_number "1"; scaffold_56153 StringTie exon 1836 2083 1000 - . gene_id "MSTRG.104450"; transcript_id "MSTRG.104450.1"; exon_number "1"; scaffold_562 StringTie exon 302185 302209 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "1"; scaffold_562 StringTie exon 302742 302881 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "2"; scaffold_562 StringTie exon 303050 303188 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "3"; scaffold_562 StringTie exon 303576 303724 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "4"; scaffold_562 StringTie exon 304054 304155 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "5"; scaffold_562 StringTie exon 304401 304494 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "6"; scaffold_562 StringTie exon 304876 305010 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "7"; scaffold_562 StringTie exon 305549 305659 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "8"; scaffold_562 StringTie exon 306232 306667 1000 + . gene_id "MSTRG.104490"; transcript_id "MSTRG.104490.1"; exon_number "9"; scaffold_563 StringTie exon 513190 513333 1000 + . gene_id "MSTRG.104603"; transcript_id "MSTRG.104603.2"; exon_number "1"; scaffold_563 StringTie exon 513499 513631 1000 + . gene_id "MSTRG.104603"; transcript_id "MSTRG.104603.2"; exon_number "2"; scaffold_563 StringTie exon 514426 514540 1000 + . gene_id "MSTRG.104603"; transcript_id "MSTRG.104603.2"; exon_number "3"; scaffold_5631 StringTie exon 9899 10267 1000 . . gene_id "MSTRG.104624"; transcript_id "MSTRG.104624.1"; exon_number "1"; scaffold_56321 StringTie exon 1754 2327 1000 - . gene_id "MSTRG.104631"; transcript_id "MSTRG.104631.1"; exon_number "1"; scaffold_56321 StringTie exon 2348 2561 1000 - . gene_id "MSTRG.104631"; transcript_id "MSTRG.104631.1"; exon_number "2"; scaffold_5634 StringTie exon 30445 30706 1000 . . gene_id "MSTRG.104648"; transcript_id "MSTRG.104648.1"; exon_number "1"; scaffold_5635 StringTie exon 19075 19301 1000 . . gene_id "MSTRG.104653"; transcript_id "MSTRG.104653.1"; exon_number "1"; scaffold_5636 StringTie exon 19237 19638 1000 . . gene_id "MSTRG.104662"; transcript_id "MSTRG.104662.1"; exon_number "1"; scaffold_56369 StringTie exon 843 914 1000 - . gene_id "MSTRG.104671"; transcript_id "MSTRG.104671.1"; exon_number "1"; scaffold_56369 StringTie exon 1035 1102 1000 - . gene_id "MSTRG.104671"; transcript_id "MSTRG.104671.1"; exon_number "2"; scaffold_56369 StringTie exon 2077 2112 1000 - . gene_id "MSTRG.104671"; transcript_id "MSTRG.104671.1"; exon_number "3"; scaffold_56369 StringTie exon 2217 2279 1000 - . gene_id "MSTRG.104671"; transcript_id "MSTRG.104671.1"; exon_number "4"; scaffold_5639 StringTie exon 39392 39558 1000 + . gene_id "MSTRG.104680"; transcript_id "MSTRG.104680.1"; exon_number "1"; scaffold_5639 StringTie exon 39795 39911 1000 + . gene_id "MSTRG.104680"; transcript_id "MSTRG.104680.1"; exon_number "2"; scaffold_564 StringTie exon 72188 72414 1000 - . gene_id "MSTRG.104686"; transcript_id "MSTRG.104686.1"; exon_number "1"; scaffold_564 StringTie exon 441209 441437 1000 . . gene_id "MSTRG.104709"; transcript_id "MSTRG.104709.1"; exon_number "1"; scaffold_564 StringTie exon 585863 586090 1000 . . gene_id "MSTRG.104718"; transcript_id "MSTRG.104718.1"; exon_number "1"; scaffold_564 StringTie exon 642372 642615 1000 . . gene_id "MSTRG.104720"; transcript_id "MSTRG.104720.1"; exon_number "1"; scaffold_56418 StringTie exon 264 520 1000 . . gene_id "MSTRG.104736"; transcript_id "MSTRG.104736.1"; exon_number "1"; scaffold_56423 StringTie exon 979 1604 1000 . . gene_id "MSTRG.104742"; transcript_id "MSTRG.104742.1"; exon_number "1"; scaffold_56440 StringTie exon 412 692 1000 . . gene_id "MSTRG.104751"; transcript_id "MSTRG.104751.1"; exon_number "1"; scaffold_5648 StringTie exon 22390 22901 1000 . . gene_id "MSTRG.104771"; transcript_id "MSTRG.104771.1"; exon_number "1"; scaffold_565 StringTie exon 358033 358349 1000 . . gene_id "MSTRG.104795"; transcript_id "MSTRG.104795.1"; exon_number "1"; scaffold_565 StringTie exon 520750 520971 1000 . . gene_id "MSTRG.104802"; transcript_id "MSTRG.104802.1"; exon_number "1"; scaffold_565 StringTie exon 680067 680295 1000 . . gene_id "MSTRG.104808"; transcript_id "MSTRG.104808.1"; exon_number "1"; scaffold_56504 StringTie exon 472 684 1000 . . gene_id "MSTRG.104815"; transcript_id "MSTRG.104815.1"; exon_number "1"; scaffold_56519 StringTie exon 732 1281 1000 . . gene_id "MSTRG.104822"; transcript_id "MSTRG.104822.1"; exon_number "1"; scaffold_56526 StringTie exon 516 776 1000 . . gene_id "MSTRG.104827"; transcript_id "MSTRG.104827.1"; exon_number "1"; scaffold_5653 StringTie exon 5090 5184 1000 + . gene_id "MSTRG.104829"; transcript_id "MSTRG.104829.1"; exon_number "1"; scaffold_5653 StringTie exon 5302 5446 1000 + . gene_id "MSTRG.104829"; transcript_id "MSTRG.104829.1"; exon_number "2"; scaffold_5653 StringTie exon 5766 5980 1000 + . gene_id "MSTRG.104829"; transcript_id "MSTRG.104829.1"; exon_number "3"; scaffold_5653 StringTie exon 6354 6480 1000 + . gene_id "MSTRG.104829"; transcript_id "MSTRG.104829.1"; exon_number "4"; scaffold_5653 StringTie exon 6819 6912 1000 + . gene_id "MSTRG.104829"; transcript_id "MSTRG.104829.1"; exon_number "5"; scaffold_5655 StringTie exon 8665 9035 1000 . . gene_id "MSTRG.104847"; transcript_id "MSTRG.104847.1"; exon_number "1"; scaffold_5655 StringTie exon 35701 35754 1000 - . gene_id "MSTRG.104853"; transcript_id "MSTRG.104853.1"; exon_number "1"; scaffold_5655 StringTie exon 38944 39107 1000 - . gene_id "MSTRG.104853"; transcript_id "MSTRG.104853.1"; exon_number "2"; scaffold_5655 StringTie exon 39488 39591 1000 - . gene_id "MSTRG.104853"; transcript_id "MSTRG.104853.1"; exon_number "3"; scaffold_5656 StringTie exon 10310 10373 1000 + . gene_id "MSTRG.104857"; transcript_id "MSTRG.104857.1"; exon_number "1"; scaffold_5656 StringTie exon 16143 18503 1000 + . gene_id "MSTRG.104857"; transcript_id "MSTRG.104857.1"; exon_number "2"; scaffold_566 StringTie exon 369 794 1000 . . gene_id "MSTRG.104884"; transcript_id "MSTRG.104884.1"; exon_number "1"; scaffold_566 StringTie exon 16142 16571 1000 . . gene_id "MSTRG.104888"; transcript_id "MSTRG.104888.1"; exon_number "1"; scaffold_566 StringTie exon 196476 196754 1000 . . gene_id "MSTRG.104899"; transcript_id "MSTRG.104899.1"; exon_number "1"; scaffold_5664 StringTie exon 4897 5130 1000 . . gene_id "MSTRG.104937"; transcript_id "MSTRG.104937.1"; exon_number "1"; scaffold_5666 StringTie exon 16574 16811 1000 . . gene_id "MSTRG.104951"; transcript_id "MSTRG.104951.1"; exon_number "1"; scaffold_56665 StringTie exon 1621 1920 1000 . . gene_id "MSTRG.104955"; transcript_id "MSTRG.104955.1"; exon_number "1"; scaffold_5667 StringTie exon 28150 28413 1000 . . gene_id "MSTRG.104957"; transcript_id "MSTRG.104957.1"; exon_number "1"; scaffold_5669 StringTie exon 26412 26652 1000 . . gene_id "MSTRG.104970"; transcript_id "MSTRG.104970.1"; exon_number "1"; scaffold_56699 StringTie exon 1266 1563 1000 . . gene_id "MSTRG.104974"; transcript_id "MSTRG.104974.1"; exon_number "1"; scaffold_567 StringTie exon 66278 66410 1000 - . gene_id "MSTRG.104983"; transcript_id "MSTRG.104983.1"; exon_number "1"; scaffold_567 StringTie exon 66538 66587 1000 - . gene_id "MSTRG.104983"; transcript_id "MSTRG.104983.1"; exon_number "2"; scaffold_567 StringTie exon 66702 66783 1000 - . gene_id "MSTRG.104983"; transcript_id "MSTRG.104983.1"; exon_number "3"; scaffold_567 StringTie exon 163327 163342 1000 - . gene_id "MSTRG.104990"; transcript_id "MSTRG.104990.1"; exon_number "1"; scaffold_567 StringTie exon 187875 188076 1000 - . gene_id "MSTRG.104990"; transcript_id "MSTRG.104990.1"; exon_number "2"; scaffold_567 StringTie exon 216077 216101 1000 - . gene_id "MSTRG.104990"; transcript_id "MSTRG.104990.1"; exon_number "3"; scaffold_567 StringTie exon 514903 515236 1000 . . gene_id "MSTRG.105022"; transcript_id "MSTRG.105022.1"; exon_number "1"; scaffold_5671 StringTie exon 34215 34475 1000 . . gene_id "MSTRG.105040"; transcript_id "MSTRG.105040.1"; exon_number "1"; scaffold_56724 StringTie exon 1286 1611 1000 + . gene_id "MSTRG.105048"; transcript_id "MSTRG.105048.1"; exon_number "1"; scaffold_56746 StringTie exon 2038 2363 1000 . . gene_id "MSTRG.105059"; transcript_id "MSTRG.105059.1"; exon_number "1"; scaffold_56748 StringTie exon 446 779 1000 . . gene_id "MSTRG.105060"; transcript_id "MSTRG.105060.1"; exon_number "1"; scaffold_5676 StringTie exon 2428 3076 1000 . . gene_id "MSTRG.105063"; transcript_id "MSTRG.105063.1"; exon_number "1"; scaffold_56761 StringTie exon 252 530 1000 . . gene_id "MSTRG.105068"; transcript_id "MSTRG.105068.1"; exon_number "1"; scaffold_5677 StringTie exon 7506 7782 1000 . . gene_id "MSTRG.105071"; transcript_id "MSTRG.105071.1"; exon_number "1"; scaffold_568 StringTie exon 7779 8065 1000 . . gene_id "MSTRG.105096"; transcript_id "MSTRG.105096.1"; exon_number "1"; scaffold_568 StringTie exon 124275 124623 1000 . . gene_id "MSTRG.105105"; transcript_id "MSTRG.105105.1"; exon_number "1"; scaffold_568 StringTie exon 192800 193028 1000 . . gene_id "MSTRG.105107"; transcript_id "MSTRG.105107.1"; exon_number "1"; scaffold_568 StringTie exon 203434 203671 1000 . . gene_id "MSTRG.105108"; transcript_id "MSTRG.105108.1"; exon_number "1"; scaffold_568 StringTie exon 237671 237685 1000 - . gene_id "MSTRG.105112"; transcript_id "MSTRG.105112.1"; exon_number "1"; scaffold_568 StringTie exon 239553 239677 1000 - . gene_id "MSTRG.105112"; transcript_id "MSTRG.105112.1"; exon_number "2"; scaffold_568 StringTie exon 242978 243065 1000 - . gene_id "MSTRG.105112"; transcript_id "MSTRG.105112.1"; exon_number "3"; scaffold_568 StringTie exon 252300 252512 1000 - . gene_id "MSTRG.105112"; transcript_id "MSTRG.105112.1"; exon_number "4"; scaffold_568 StringTie exon 490570 490646 1000 + . gene_id "MSTRG.105128"; transcript_id "MSTRG.105128.1"; exon_number "1"; scaffold_568 StringTie exon 492355 492643 1000 + . gene_id "MSTRG.105128"; transcript_id "MSTRG.105128.1"; exon_number "2"; scaffold_56811 StringTie exon 2159 2380 1000 . . gene_id "MSTRG.105151"; transcript_id "MSTRG.105151.1"; exon_number "1"; scaffold_56829 StringTie exon 62 1304 1000 . . gene_id "MSTRG.105158"; transcript_id "MSTRG.105158.1"; exon_number "1"; scaffold_56864 StringTie exon 2287 2503 1000 . . gene_id "MSTRG.105179"; transcript_id "MSTRG.105179.1"; exon_number "1"; scaffold_569 StringTie exon 109353 109564 1000 . . gene_id "MSTRG.105201"; transcript_id "MSTRG.105201.1"; exon_number "1"; scaffold_569 StringTie exon 153634 154010 1000 . . gene_id "MSTRG.105204"; transcript_id "MSTRG.105204.1"; exon_number "1"; scaffold_569 StringTie exon 277202 277567 1000 - . gene_id "MSTRG.105219"; transcript_id "MSTRG.105219.1"; exon_number "1"; scaffold_569 StringTie exon 277652 277800 1000 - . gene_id "MSTRG.105219"; transcript_id "MSTRG.105219.1"; exon_number "2"; scaffold_569 StringTie exon 329528 329735 1000 - . gene_id "MSTRG.105223"; transcript_id "MSTRG.105223.2"; exon_number "1"; scaffold_569 StringTie exon 331234 331466 1000 . . gene_id "MSTRG.105225"; transcript_id "MSTRG.105225.1"; exon_number "1"; scaffold_569 StringTie exon 404518 404922 1000 - . gene_id "MSTRG.105235"; transcript_id "MSTRG.105235.1"; exon_number "1"; scaffold_569 StringTie exon 405048 405157 1000 - . gene_id "MSTRG.105235"; transcript_id "MSTRG.105235.1"; exon_number "2"; scaffold_569 StringTie exon 405432 405564 1000 - . gene_id "MSTRG.105235"; transcript_id "MSTRG.105235.1"; exon_number "3"; scaffold_569 StringTie exon 405885 405948 1000 - . gene_id "MSTRG.105235"; transcript_id "MSTRG.105235.1"; exon_number "4"; scaffold_569 StringTie exon 406682 406880 1000 - . gene_id "MSTRG.105235"; transcript_id "MSTRG.105235.1"; exon_number "5"; scaffold_569 StringTie exon 553850 554075 1000 . . gene_id "MSTRG.105245"; transcript_id "MSTRG.105245.1"; exon_number "1"; scaffold_569 StringTie exon 624981 625380 1000 . . gene_id "MSTRG.105252"; transcript_id "MSTRG.105252.1"; exon_number "1"; scaffold_5690 StringTie exon 22145 22345 1000 . . gene_id "MSTRG.105256"; transcript_id "MSTRG.105256.1"; exon_number "1"; scaffold_5691 StringTie exon 37867 38086 1000 . . gene_id "MSTRG.105263"; transcript_id "MSTRG.105263.1"; exon_number "1"; scaffold_56910 StringTie exon 824 1134 1000 . . gene_id "MSTRG.105265"; transcript_id "MSTRG.105265.1"; exon_number "1"; scaffold_56913 StringTie exon 1596 1661 1000 - . gene_id "MSTRG.105267"; transcript_id "MSTRG.105267.1"; exon_number "1"; scaffold_56913 StringTie exon 1816 1896 1000 - . gene_id "MSTRG.105267"; transcript_id "MSTRG.105267.1"; exon_number "2"; scaffold_56913 StringTie exon 2100 2225 1000 - . gene_id "MSTRG.105267"; transcript_id "MSTRG.105267.1"; exon_number "3"; scaffold_56951 StringTie exon 312 1930 1000 . . gene_id "MSTRG.105292"; transcript_id "MSTRG.105292.1"; exon_number "1"; scaffold_5696 StringTie exon 23432 23669 1000 . . gene_id "MSTRG.105296"; transcript_id "MSTRG.105296.1"; exon_number "1"; scaffold_5696 StringTie exon 27818 28118 1000 . . gene_id "MSTRG.105297"; transcript_id "MSTRG.105297.1"; exon_number "1"; scaffold_56991 StringTie exon 1693 2395 1000 . . gene_id "MSTRG.105315"; transcript_id "MSTRG.105315.1"; exon_number "1"; scaffold_56994 StringTie exon 562 803 1000 . . gene_id "MSTRG.105316"; transcript_id "MSTRG.105316.1"; exon_number "1"; scaffold_57 StringTie exon 207824 208120 1000 . . gene_id "MSTRG.105331"; transcript_id "MSTRG.105331.1"; exon_number "1"; scaffold_57 StringTie exon 263319 263518 1000 . . gene_id "MSTRG.105335"; transcript_id "MSTRG.105335.1"; exon_number "1"; scaffold_57 StringTie exon 268398 268849 1000 . . gene_id "MSTRG.105336"; transcript_id "MSTRG.105336.1"; exon_number "1"; scaffold_57 StringTie exon 1152928 1153145 1000 . . gene_id "MSTRG.105384"; transcript_id "MSTRG.105384.1"; exon_number "1"; scaffold_57 StringTie exon 1297198 1297410 1000 . . gene_id "MSTRG.105395"; transcript_id "MSTRG.105395.1"; exon_number "1"; scaffold_57 StringTie exon 1388237 1388551 1000 . . gene_id "MSTRG.105399"; transcript_id "MSTRG.105399.1"; exon_number "1"; scaffold_57 StringTie exon 1591042 1591302 1000 . . gene_id "MSTRG.105407"; transcript_id "MSTRG.105407.1"; exon_number "1"; scaffold_57 StringTie exon 1779389 1779508 1000 - . gene_id "MSTRG.105424"; transcript_id "MSTRG.105424.1"; exon_number "1"; scaffold_57 StringTie exon 1779622 1779785 1000 - . gene_id "MSTRG.105424"; transcript_id "MSTRG.105424.1"; exon_number "2"; scaffold_57 StringTie exon 2086533 2086873 1000 . . gene_id "MSTRG.105444"; transcript_id "MSTRG.105444.1"; exon_number "1"; scaffold_570 StringTie exon 304657 304924 1000 . . gene_id "MSTRG.105465"; transcript_id "MSTRG.105465.1"; exon_number "1"; scaffold_570 StringTie exon 442562 442766 1000 . . gene_id "MSTRG.105478"; transcript_id "MSTRG.105478.1"; exon_number "1"; scaffold_570 StringTie exon 465671 466097 1000 . . gene_id "MSTRG.105480"; transcript_id "MSTRG.105480.1"; exon_number "1"; scaffold_570 StringTie exon 624461 624666 1000 . . gene_id "MSTRG.105501"; transcript_id "MSTRG.105501.1"; exon_number "1"; scaffold_57013 StringTie exon 2130 2438 1000 . . gene_id "MSTRG.105517"; transcript_id "MSTRG.105517.1"; exon_number "1"; scaffold_5704 StringTie exon 33350 33813 1000 . . gene_id "MSTRG.105535"; transcript_id "MSTRG.105535.1"; exon_number "1"; scaffold_5707 StringTie exon 3467 3813 1000 . . gene_id "MSTRG.105547"; transcript_id "MSTRG.105547.1"; exon_number "1"; scaffold_5707 StringTie exon 24568 25012 1000 . . gene_id "MSTRG.105549"; transcript_id "MSTRG.105549.1"; exon_number "1"; scaffold_5708 StringTie exon 22819 22911 1000 - . gene_id "MSTRG.105559"; transcript_id "MSTRG.105559.1"; exon_number "1"; scaffold_5708 StringTie exon 24428 24573 1000 - . gene_id "MSTRG.105559"; transcript_id "MSTRG.105559.1"; exon_number "2"; scaffold_5708 StringTie exon 30381 30411 1000 - . gene_id "MSTRG.105559"; transcript_id "MSTRG.105559.1"; exon_number "3"; scaffold_5708 StringTie exon 31082 31126 1000 - . gene_id "MSTRG.105559"; transcript_id "MSTRG.105559.1"; exon_number "4"; scaffold_5709 StringTie exon 24209 24409 1000 + . gene_id "MSTRG.105564"; transcript_id "MSTRG.105564.1"; exon_number "1"; scaffold_5709 StringTie exon 30261 30478 1000 . . gene_id "MSTRG.105566"; transcript_id "MSTRG.105566.1"; exon_number "1"; scaffold_571 StringTie exon 3766 4030 1000 . . gene_id "MSTRG.105571"; transcript_id "MSTRG.105571.1"; exon_number "1"; scaffold_571 StringTie exon 21201 21774 1000 . . gene_id "MSTRG.105575"; transcript_id "MSTRG.105575.1"; exon_number "1"; scaffold_571 StringTie exon 330405 330666 1000 . . gene_id "MSTRG.105595"; transcript_id "MSTRG.105595.1"; exon_number "1"; scaffold_571 StringTie exon 375016 375406 1000 . . gene_id "MSTRG.105597"; transcript_id "MSTRG.105597.1"; exon_number "1"; scaffold_571 StringTie exon 568701 568954 1000 . . gene_id "MSTRG.105610"; transcript_id "MSTRG.105610.1"; exon_number "1"; scaffold_571 StringTie exon 593748 594291 1000 . . gene_id "MSTRG.105612"; transcript_id "MSTRG.105612.1"; exon_number "1"; scaffold_5715 StringTie exon 26245 26509 1000 . . gene_id "MSTRG.105643"; transcript_id "MSTRG.105643.1"; exon_number "1"; scaffold_57197 StringTie exon 22 335 1000 . . gene_id "MSTRG.105669"; transcript_id "MSTRG.105669.1"; exon_number "1"; scaffold_5723 StringTie exon 1174 1663 1000 . . gene_id "MSTRG.105713"; transcript_id "MSTRG.105713.1"; exon_number "1"; scaffold_5726 StringTie exon 34455 34543 1000 + . gene_id "MSTRG.105730"; transcript_id "MSTRG.105730.2"; exon_number "1"; scaffold_5726 StringTie exon 34582 34699 1000 + . gene_id "MSTRG.105730"; transcript_id "MSTRG.105730.2"; exon_number "2"; scaffold_5727 StringTie exon 9217 9439 1000 . . gene_id "MSTRG.105733"; transcript_id "MSTRG.105733.1"; exon_number "1"; scaffold_5727 StringTie exon 27882 28272 1000 . . gene_id "MSTRG.105735"; transcript_id "MSTRG.105735.1"; exon_number "1"; scaffold_57272 StringTie exon 11 2546 1000 . . gene_id "MSTRG.105738"; transcript_id "MSTRG.105738.1"; exon_number "1"; scaffold_5728 StringTie exon 14941 16165 1000 . . gene_id "MSTRG.105742"; transcript_id "MSTRG.105742.1"; exon_number "1"; scaffold_57282 StringTie exon 2193 2528 1000 . . gene_id "MSTRG.105746"; transcript_id "MSTRG.105746.1"; exon_number "1"; scaffold_573 StringTie exon 37885 38163 1000 . . gene_id "MSTRG.105767"; transcript_id "MSTRG.105767.1"; exon_number "1"; scaffold_573 StringTie exon 69964 70169 1000 . . gene_id "MSTRG.105770"; transcript_id "MSTRG.105770.1"; exon_number "1"; scaffold_573 StringTie exon 271365 271396 1000 + . gene_id "MSTRG.105792"; transcript_id "MSTRG.105792.2"; exon_number "1"; scaffold_573 StringTie exon 271565 271596 1000 + . gene_id "MSTRG.105792"; transcript_id "MSTRG.105792.2"; exon_number "2"; scaffold_573 StringTie exon 271694 272217 1000 + . gene_id "MSTRG.105792"; transcript_id "MSTRG.105792.2"; exon_number "3"; scaffold_573 StringTie exon 272368 272427 1000 + . gene_id "MSTRG.105792"; transcript_id "MSTRG.105792.2"; exon_number "4"; scaffold_573 StringTie exon 595573 595602 1000 + . gene_id "MSTRG.105819"; transcript_id "MSTRG.105819.1"; exon_number "1"; scaffold_573 StringTie exon 595803 595927 1000 + . gene_id "MSTRG.105819"; transcript_id "MSTRG.105819.1"; exon_number "2"; scaffold_573 StringTie exon 596007 596081 1000 + . gene_id "MSTRG.105819"; transcript_id "MSTRG.105819.1"; exon_number "3"; scaffold_573 StringTie exon 596392 596539 1000 + . gene_id "MSTRG.105819"; transcript_id "MSTRG.105819.1"; exon_number "4"; scaffold_573 StringTie exon 597057 597137 1000 + . gene_id "MSTRG.105819"; transcript_id "MSTRG.105819.1"; exon_number "5"; scaffold_57311 StringTie exon 617 984 1000 . . gene_id "MSTRG.105838"; transcript_id "MSTRG.105838.1"; exon_number "1"; scaffold_5732 StringTie exon 33715 34001 1000 . . gene_id "MSTRG.105848"; transcript_id "MSTRG.105848.1"; exon_number "1"; scaffold_574 StringTie exon 102 265 1000 + . gene_id "MSTRG.105896"; transcript_id "MSTRG.105896.1"; exon_number "1"; scaffold_574 StringTie exon 633 695 1000 + . gene_id "MSTRG.105896"; transcript_id "MSTRG.105896.1"; exon_number "2"; scaffold_574 StringTie exon 1100 1227 1000 + . gene_id "MSTRG.105896"; transcript_id "MSTRG.105896.1"; exon_number "3"; scaffold_574 StringTie exon 1452 1513 1000 + . gene_id "MSTRG.105896"; transcript_id "MSTRG.105896.1"; exon_number "4"; scaffold_574 StringTie exon 2064 3143 1000 + . gene_id "MSTRG.105896"; transcript_id "MSTRG.105896.1"; exon_number "5"; scaffold_574 StringTie exon 3288 3686 1000 - . gene_id "MSTRG.105897"; transcript_id "MSTRG.105897.1"; exon_number "1"; scaffold_574 StringTie exon 4143 4233 1000 - . gene_id "MSTRG.105897"; transcript_id "MSTRG.105897.1"; exon_number "2"; scaffold_574 StringTie exon 4406 4478 1000 - . gene_id "MSTRG.105897"; transcript_id "MSTRG.105897.1"; exon_number "3"; scaffold_574 StringTie exon 6421 6471 1000 - . gene_id "MSTRG.105897"; transcript_id "MSTRG.105897.1"; exon_number "4"; scaffold_574 StringTie exon 6622 6661 1000 - . gene_id "MSTRG.105897"; transcript_id "MSTRG.105897.1"; exon_number "5"; scaffold_574 StringTie exon 8432 8468 1000 - . gene_id "MSTRG.105897"; transcript_id "MSTRG.105897.1"; exon_number "6"; scaffold_574 StringTie exon 8578 8639 1000 - . gene_id "MSTRG.105897"; transcript_id "MSTRG.105897.1"; exon_number "7"; scaffold_574 StringTie exon 23492 25638 1000 - . gene_id "MSTRG.105900"; transcript_id "MSTRG.105900.1"; exon_number "1"; scaffold_574 StringTie exon 26769 26876 1000 - . gene_id "MSTRG.105900"; transcript_id "MSTRG.105900.1"; exon_number "2"; scaffold_574 StringTie exon 27145 27399 1000 - . gene_id "MSTRG.105900"; transcript_id "MSTRG.105900.1"; exon_number "3"; scaffold_574 StringTie exon 32039 32252 1000 - . gene_id "MSTRG.105900"; transcript_id "MSTRG.105900.1"; exon_number "4"; scaffold_574 StringTie exon 32533 32875 1000 - . gene_id "MSTRG.105900"; transcript_id "MSTRG.105900.1"; exon_number "5"; scaffold_574 StringTie exon 419544 420823 1000 . . gene_id "MSTRG.105930"; transcript_id "MSTRG.105930.1"; exon_number "1"; scaffold_5741 StringTie exon 12223 12442 1000 . . gene_id "MSTRG.105949"; transcript_id "MSTRG.105949.1"; exon_number "1"; scaffold_5741 StringTie exon 24883 25126 1000 . . gene_id "MSTRG.105950"; transcript_id "MSTRG.105950.1"; exon_number "1"; scaffold_5742 StringTie exon 38975 39269 1000 . . gene_id "MSTRG.105957"; transcript_id "MSTRG.105957.1"; exon_number "1"; scaffold_57433 StringTie exon 1083 1397 1000 . . gene_id "MSTRG.105967"; transcript_id "MSTRG.105967.1"; exon_number "1"; scaffold_57436 StringTie exon 378 750 1000 + . gene_id "MSTRG.105969"; transcript_id "MSTRG.105969.1"; exon_number "1"; scaffold_5744 StringTie exon 29885 29957 1000 + . gene_id "MSTRG.105975"; transcript_id "MSTRG.105975.1"; exon_number "1"; scaffold_5744 StringTie exon 30427 30513 1000 + . gene_id "MSTRG.105975"; transcript_id "MSTRG.105975.1"; exon_number "2"; scaffold_5744 StringTie exon 30627 31148 1000 + . gene_id "MSTRG.105975"; transcript_id "MSTRG.105975.1"; exon_number "3"; scaffold_57474 StringTie exon 7 374 1000 . . gene_id "MSTRG.105990"; transcript_id "MSTRG.105990.1"; exon_number "1"; scaffold_575 StringTie exon 401304 401999 1000 . . gene_id "MSTRG.106026"; transcript_id "MSTRG.106026.1"; exon_number "1"; scaffold_575 StringTie exon 420709 421032 1000 . . gene_id "MSTRG.106027"; transcript_id "MSTRG.106027.1"; exon_number "1"; scaffold_57515 StringTie exon 1969 2212 1000 . . gene_id "MSTRG.106054"; transcript_id "MSTRG.106054.1"; exon_number "1"; scaffold_57522 StringTie exon 347 646 1000 . . gene_id "MSTRG.106058"; transcript_id "MSTRG.106058.1"; exon_number "1"; scaffold_576 StringTie exon 29881 30080 1000 . . gene_id "MSTRG.106102"; transcript_id "MSTRG.106102.1"; exon_number "1"; scaffold_576 StringTie exon 73700 74551 1000 . . gene_id "MSTRG.106109"; transcript_id "MSTRG.106109.1"; exon_number "1"; scaffold_576 StringTie exon 303161 304616 1000 + . gene_id "MSTRG.106119"; transcript_id "MSTRG.106119.1"; exon_number "1"; scaffold_5764 StringTie exon 20018 20245 1000 . . gene_id "MSTRG.106169"; transcript_id "MSTRG.106169.1"; exon_number "1"; scaffold_57644 StringTie exon 219 420 1000 . . gene_id "MSTRG.106173"; transcript_id "MSTRG.106173.1"; exon_number "1"; scaffold_5765 StringTie exon 33896 34159 1000 . . gene_id "MSTRG.106179"; transcript_id "MSTRG.106179.1"; exon_number "1"; scaffold_5766 StringTie exon 13625 13853 1000 . . gene_id "MSTRG.106180"; transcript_id "MSTRG.106180.1"; exon_number "1"; scaffold_5767 StringTie exon 841 1234 1000 . . gene_id "MSTRG.106184"; transcript_id "MSTRG.106184.1"; exon_number "1"; scaffold_5767 StringTie exon 29161 30089 1000 . . gene_id "MSTRG.106186"; transcript_id "MSTRG.106186.1"; exon_number "1"; scaffold_57686 StringTie exon 173 236 1000 + . gene_id "MSTRG.106200"; transcript_id "MSTRG.106200.1"; exon_number "1"; scaffold_57686 StringTie exon 1612 1786 1000 + . gene_id "MSTRG.106200"; transcript_id "MSTRG.106200.1"; exon_number "2"; scaffold_577 StringTie exon 80013 80857 1000 . . gene_id "MSTRG.106214"; transcript_id "MSTRG.106214.1"; exon_number "1"; scaffold_577 StringTie exon 300443 300664 1000 . . gene_id "MSTRG.106236"; transcript_id "MSTRG.106236.1"; exon_number "1"; scaffold_577 StringTie exon 369914 370157 1000 + . gene_id "MSTRG.106242"; transcript_id "MSTRG.106242.1"; exon_number "1"; scaffold_577 StringTie exon 531271 531872 1000 . . gene_id "MSTRG.106248"; transcript_id "MSTRG.106248.1"; exon_number "1"; scaffold_577 StringTie exon 662019 662350 1000 . . gene_id "MSTRG.106258"; transcript_id "MSTRG.106258.1"; exon_number "1"; scaffold_57730 StringTie exon 910 1137 1000 . . gene_id "MSTRG.106275"; transcript_id "MSTRG.106275.1"; exon_number "1"; scaffold_57739 StringTie exon 1553 1906 1000 . . gene_id "MSTRG.106276"; transcript_id "MSTRG.106276.1"; exon_number "1"; scaffold_5775 StringTie exon 38945 39146 1000 . . gene_id "MSTRG.106286"; transcript_id "MSTRG.106286.1"; exon_number "1"; scaffold_57752 StringTie exon 2207 2530 1000 . . gene_id "MSTRG.106289"; transcript_id "MSTRG.106289.1"; exon_number "1"; scaffold_57779 StringTie exon 2037 2523 1000 . . gene_id "MSTRG.106298"; transcript_id "MSTRG.106298.1"; exon_number "1"; scaffold_578 StringTie exon 1200 1296 1000 + . gene_id "MSTRG.106312"; transcript_id "MSTRG.106312.1"; exon_number "1"; scaffold_578 StringTie exon 1603 1718 1000 + . gene_id "MSTRG.106312"; transcript_id "MSTRG.106312.1"; exon_number "2"; scaffold_578 StringTie exon 2933 3660 1000 + . gene_id "MSTRG.106312"; transcript_id "MSTRG.106312.1"; exon_number "3"; scaffold_578 StringTie exon 68210 68378 1000 - . gene_id "MSTRG.106321"; transcript_id "MSTRG.106321.1"; exon_number "1"; scaffold_578 StringTie exon 69648 69906 1000 - . gene_id "MSTRG.106321"; transcript_id "MSTRG.106321.1"; exon_number "2"; scaffold_578 StringTie exon 321632 321858 1000 . . gene_id "MSTRG.106329"; transcript_id "MSTRG.106329.1"; exon_number "1"; scaffold_578 StringTie exon 347495 347873 1000 . . gene_id "MSTRG.106330"; transcript_id "MSTRG.106330.1"; exon_number "1"; scaffold_578 StringTie exon 593733 594398 1000 . . gene_id "MSTRG.106356"; transcript_id "MSTRG.106356.1"; exon_number "1"; scaffold_57820 StringTie exon 1055 1309 1000 . . gene_id "MSTRG.106383"; transcript_id "MSTRG.106383.1"; exon_number "1"; scaffold_5784 StringTie exon 8220 8433 1000 . . gene_id "MSTRG.106391"; transcript_id "MSTRG.106391.1"; exon_number "1"; scaffold_57888 StringTie exon 337 610 1000 . . gene_id "MSTRG.106420"; transcript_id "MSTRG.106420.1"; exon_number "1"; scaffold_57896 StringTie exon 1245 1508 1000 . . gene_id "MSTRG.106429"; transcript_id "MSTRG.106429.1"; exon_number "1"; scaffold_579 StringTie exon 55967 56918 1000 . . gene_id "MSTRG.106442"; transcript_id "MSTRG.106442.1"; exon_number "1"; scaffold_579 StringTie exon 84934 85073 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "1"; scaffold_579 StringTie exon 85803 85968 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "2"; scaffold_579 StringTie exon 86095 86213 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "3"; scaffold_579 StringTie exon 86360 86467 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "4"; scaffold_579 StringTie exon 99473 99586 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "5"; scaffold_579 StringTie exon 99806 99982 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "6"; scaffold_579 StringTie exon 100250 100385 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "7"; scaffold_579 StringTie exon 100494 100699 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "8"; scaffold_579 StringTie exon 100819 100968 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "9"; scaffold_579 StringTie exon 101065 101186 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "10"; scaffold_579 StringTie exon 101296 101565 1000 + . gene_id "MSTRG.106447"; transcript_id "MSTRG.106447.1"; exon_number "11"; scaffold_579 StringTie exon 107179 107254 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "1"; scaffold_579 StringTie exon 108446 108547 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "2"; scaffold_579 StringTie exon 108997 109053 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "3"; scaffold_579 StringTie exon 109848 109914 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "4"; scaffold_579 StringTie exon 110009 110103 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "5"; scaffold_579 StringTie exon 110344 110415 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "6"; scaffold_579 StringTie exon 110500 110591 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "7"; scaffold_579 StringTie exon 112102 112177 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "8"; scaffold_579 StringTie exon 112619 113133 1000 + . gene_id "MSTRG.106450"; transcript_id "MSTRG.106450.1"; exon_number "9"; scaffold_5790 StringTie exon 36155 36258 1000 - . gene_id "MSTRG.106515"; transcript_id "MSTRG.106515.1"; exon_number "1"; scaffold_5790 StringTie exon 36354 36499 1000 - . gene_id "MSTRG.106515"; transcript_id "MSTRG.106515.1"; exon_number "2"; scaffold_5790 StringTie exon 38789 38909 1000 - . gene_id "MSTRG.106515"; transcript_id "MSTRG.106515.1"; exon_number "3"; scaffold_5790 StringTie exon 39131 39273 1000 - . gene_id "MSTRG.106515"; transcript_id "MSTRG.106515.1"; exon_number "4"; scaffold_5790 StringTie exon 39425 39606 1000 - . gene_id "MSTRG.106515"; transcript_id "MSTRG.106515.1"; exon_number "5"; scaffold_5790 StringTie exon 39725 39847 1000 - . gene_id "MSTRG.106515"; transcript_id "MSTRG.106515.1"; exon_number "6"; scaffold_5791 StringTie exon 135 202 1000 + . gene_id "MSTRG.106520"; transcript_id "MSTRG.106520.1"; exon_number "1"; scaffold_5791 StringTie exon 290 347 1000 + . gene_id "MSTRG.106520"; transcript_id "MSTRG.106520.1"; exon_number "2"; scaffold_5791 StringTie exon 624 688 1000 + . gene_id "MSTRG.106520"; transcript_id "MSTRG.106520.1"; exon_number "3"; scaffold_5791 StringTie exon 872 940 1000 + . gene_id "MSTRG.106520"; transcript_id "MSTRG.106520.1"; exon_number "4"; scaffold_5791 StringTie exon 1110 1188 1000 + . gene_id "MSTRG.106520"; transcript_id "MSTRG.106520.1"; exon_number "5"; scaffold_5791 StringTie exon 1507 1623 1000 + . gene_id "MSTRG.106520"; transcript_id "MSTRG.106520.1"; exon_number "6"; scaffold_5791 StringTie exon 1838 1896 1000 + . gene_id "MSTRG.106520"; transcript_id "MSTRG.106520.1"; exon_number "7"; scaffold_5791 StringTie exon 2226 2803 1000 + . gene_id "MSTRG.106520"; transcript_id "MSTRG.106520.1"; exon_number "8"; scaffold_5797 StringTie exon 13585 13785 1000 . . gene_id "MSTRG.106561"; transcript_id "MSTRG.106561.1"; exon_number "1"; scaffold_5798 StringTie exon 621 662 1000 + . gene_id "MSTRG.106566"; transcript_id "MSTRG.106566.1"; exon_number "1"; scaffold_5798 StringTie exon 801 1126 1000 + . gene_id "MSTRG.106566"; transcript_id "MSTRG.106566.1"; exon_number "2"; scaffold_57983 StringTie exon 1193 2069 1000 . . gene_id "MSTRG.106578"; transcript_id "MSTRG.106578.1"; exon_number "1"; scaffold_58 StringTie exon 129002 129014 1000 - . gene_id "MSTRG.106593"; transcript_id "MSTRG.106593.1"; exon_number "1"; scaffold_58 StringTie exon 129617 129833 1000 - . gene_id "MSTRG.106593"; transcript_id "MSTRG.106593.1"; exon_number "2"; scaffold_58 StringTie exon 392111 392502 1000 . . gene_id "MSTRG.106616"; transcript_id "MSTRG.106616.1"; exon_number "1"; scaffold_58 StringTie exon 472245 472420 1000 + . gene_id "MSTRG.106623"; transcript_id "MSTRG.106623.1"; exon_number "1"; scaffold_58 StringTie exon 481802 481881 1000 + . gene_id "MSTRG.106623"; transcript_id "MSTRG.106623.1"; exon_number "2"; scaffold_58 StringTie exon 485675 485694 1000 + . gene_id "MSTRG.106623"; transcript_id "MSTRG.106623.1"; exon_number "3"; scaffold_58 StringTie exon 601193 601249 1000 + . gene_id "MSTRG.106633"; transcript_id "MSTRG.106633.1"; exon_number "1"; scaffold_58 StringTie exon 603119 603247 1000 + . gene_id "MSTRG.106633"; transcript_id "MSTRG.106633.1"; exon_number "2"; scaffold_58 StringTie exon 619170 619256 1000 + . gene_id "MSTRG.106633"; transcript_id "MSTRG.106633.1"; exon_number "3"; scaffold_58 StringTie exon 624878 625085 1000 . . gene_id "MSTRG.106634"; transcript_id "MSTRG.106634.1"; exon_number "1"; scaffold_58 StringTie exon 654395 655130 1000 . . gene_id "MSTRG.106638"; transcript_id "MSTRG.106638.1"; exon_number "1"; scaffold_58 StringTie exon 693161 693450 1000 . . gene_id "MSTRG.106641"; transcript_id "MSTRG.106641.1"; exon_number "1"; scaffold_58 StringTie exon 1298998 1299215 1000 . . gene_id "MSTRG.106676"; transcript_id "MSTRG.106676.1"; exon_number "1"; scaffold_58 StringTie exon 1307954 1308278 1000 . . gene_id "MSTRG.106679"; transcript_id "MSTRG.106679.1"; exon_number "1"; scaffold_58 StringTie exon 1682575 1682724 1000 + . gene_id "MSTRG.106701"; transcript_id "MSTRG.106701.1"; exon_number "1"; scaffold_58 StringTie exon 1683213 1683366 1000 + . gene_id "MSTRG.106701"; transcript_id "MSTRG.106701.1"; exon_number "2"; scaffold_58 StringTie exon 1767028 1767495 1000 . . gene_id "MSTRG.106708"; transcript_id "MSTRG.106708.1"; exon_number "1"; scaffold_580 StringTie exon 166945 167165 1000 . . gene_id "MSTRG.106742"; transcript_id "MSTRG.106742.1"; exon_number "1"; scaffold_580 StringTie exon 223244 223597 1000 . . gene_id "MSTRG.106744"; transcript_id "MSTRG.106744.1"; exon_number "1"; scaffold_5801 StringTie exon 235 903 1000 . . gene_id "MSTRG.106771"; transcript_id "MSTRG.106771.1"; exon_number "1"; scaffold_5803 StringTie exon 5275 5608 1000 . . gene_id "MSTRG.106788"; transcript_id "MSTRG.106788.1"; exon_number "1"; scaffold_581 StringTie exon 358115 358494 1000 . . gene_id "MSTRG.106855"; transcript_id "MSTRG.106855.1"; exon_number "1"; scaffold_581 StringTie exon 451341 452249 1000 . . gene_id "MSTRG.106864"; transcript_id "MSTRG.106864.1"; exon_number "1"; scaffold_581 StringTie exon 462535 462764 1000 . . gene_id "MSTRG.106867"; transcript_id "MSTRG.106867.1"; exon_number "1"; scaffold_58104 StringTie exon 800 1066 1000 . . gene_id "MSTRG.106887"; transcript_id "MSTRG.106887.1"; exon_number "1"; scaffold_58112 StringTie exon 550 854 1000 . . gene_id "MSTRG.106901"; transcript_id "MSTRG.106901.1"; exon_number "1"; scaffold_5812 StringTie exon 38883 39092 1000 . . gene_id "MSTRG.106912"; transcript_id "MSTRG.106912.1"; exon_number "1"; scaffold_58121 StringTie exon 927 1243 1000 . . gene_id "MSTRG.106913"; transcript_id "MSTRG.106913.1"; exon_number "1"; scaffold_5813 StringTie exon 828 1094 1000 . . gene_id "MSTRG.106917"; transcript_id "MSTRG.106917.1"; exon_number "1"; scaffold_58160 StringTie exon 813 1145 1000 . . gene_id "MSTRG.106935"; transcript_id "MSTRG.106935.1"; exon_number "1"; scaffold_58187 StringTie exon 157 453 1000 + . gene_id "MSTRG.106952"; transcript_id "MSTRG.106952.1"; exon_number "1"; scaffold_58187 StringTie exon 937 1038 1000 + . gene_id "MSTRG.106952"; transcript_id "MSTRG.106952.1"; exon_number "2"; scaffold_582 StringTie exon 31435 31991 1000 . . gene_id "MSTRG.106963"; transcript_id "MSTRG.106963.1"; exon_number "1"; scaffold_582 StringTie exon 129497 129781 1000 . . gene_id "MSTRG.106974"; transcript_id "MSTRG.106974.1"; exon_number "1"; scaffold_582 StringTie exon 396217 397594 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "1"; scaffold_582 StringTie exon 397732 397887 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "2"; scaffold_582 StringTie exon 397977 398192 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "3"; scaffold_582 StringTie exon 398293 398445 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "4"; scaffold_582 StringTie exon 398607 398903 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "5"; scaffold_582 StringTie exon 399879 400028 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "6"; scaffold_582 StringTie exon 400332 400565 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "7"; scaffold_582 StringTie exon 401319 401483 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "8"; scaffold_582 StringTie exon 401738 402031 1000 + . gene_id "MSTRG.106992"; transcript_id "MSTRG.106992.1"; exon_number "9"; scaffold_582 StringTie exon 445647 445873 1000 + . gene_id "MSTRG.106999"; transcript_id "MSTRG.106999.1"; exon_number "1"; scaffold_582 StringTie exon 446254 446338 1000 + . gene_id "MSTRG.106999"; transcript_id "MSTRG.106999.1"; exon_number "2"; scaffold_582 StringTie exon 446504 446730 1000 + . gene_id "MSTRG.106999"; transcript_id "MSTRG.106999.1"; exon_number "3"; scaffold_582 StringTie exon 447290 447494 1000 + . gene_id "MSTRG.106999"; transcript_id "MSTRG.106999.1"; exon_number "4"; scaffold_582 StringTie exon 465786 465988 1000 . . gene_id "MSTRG.107003"; transcript_id "MSTRG.107003.1"; exon_number "1"; scaffold_582 StringTie exon 476636 476865 1000 . . gene_id "MSTRG.107007"; transcript_id "MSTRG.107007.1"; exon_number "1"; scaffold_582 StringTie exon 632572 632842 1000 . . gene_id "MSTRG.107017"; transcript_id "MSTRG.107017.1"; exon_number "1"; scaffold_5823 StringTie exon 2079 2221 1000 + . gene_id "MSTRG.107037"; transcript_id "MSTRG.107037.1"; exon_number "1"; scaffold_5823 StringTie exon 2579 2652 1000 + . gene_id "MSTRG.107037"; transcript_id "MSTRG.107037.1"; exon_number "2"; scaffold_5823 StringTie exon 4293 4437 1000 + . gene_id "MSTRG.107037"; transcript_id "MSTRG.107037.1"; exon_number "3"; scaffold_5823 StringTie exon 8177 8403 1000 + . gene_id "MSTRG.107037"; transcript_id "MSTRG.107037.1"; exon_number "4"; scaffold_5824 StringTie exon 36220 36428 1000 . . gene_id "MSTRG.107045"; transcript_id "MSTRG.107045.1"; exon_number "1"; scaffold_583 StringTie exon 30292 30922 1000 - . gene_id "MSTRG.107085"; transcript_id "MSTRG.107085.1"; exon_number "1"; scaffold_583 StringTie exon 36422 36551 1000 - . gene_id "MSTRG.107085"; transcript_id "MSTRG.107085.1"; exon_number "2"; scaffold_58321 StringTie exon 1601 1960 1000 . . gene_id "MSTRG.107136"; transcript_id "MSTRG.107136.1"; exon_number "1"; scaffold_58358 StringTie exon 980 1200 1000 . . gene_id "MSTRG.107153"; transcript_id "MSTRG.107153.1"; exon_number "1"; scaffold_5837 StringTie exon 89 474 1000 . . gene_id "MSTRG.107165"; transcript_id "MSTRG.107165.1"; exon_number "1"; scaffold_58372 StringTie exon 323 587 1000 . . gene_id "MSTRG.107167"; transcript_id "MSTRG.107167.1"; exon_number "1"; scaffold_58398 StringTie exon 842 1270 1000 . . gene_id "MSTRG.107181"; transcript_id "MSTRG.107181.1"; exon_number "1"; scaffold_584 StringTie exon 97814 98872 1000 . . gene_id "MSTRG.107187"; transcript_id "MSTRG.107187.1"; exon_number "1"; scaffold_58402 StringTie exon 1263 1498 1000 . . gene_id "MSTRG.107222"; transcript_id "MSTRG.107222.1"; exon_number "1"; scaffold_5841 StringTie exon 11487 11847 1000 . . gene_id "MSTRG.107226"; transcript_id "MSTRG.107226.1"; exon_number "1"; scaffold_5842 StringTie exon 28799 29157 1000 . . gene_id "MSTRG.107231"; transcript_id "MSTRG.107231.1"; exon_number "1"; scaffold_58443 StringTie exon 753 817 1000 - . gene_id "MSTRG.107246"; transcript_id "MSTRG.107246.1"; exon_number "1"; scaffold_58443 StringTie exon 1297 1369 1000 - . gene_id "MSTRG.107246"; transcript_id "MSTRG.107246.1"; exon_number "2"; scaffold_58443 StringTie exon 1939 2002 1000 - . gene_id "MSTRG.107246"; transcript_id "MSTRG.107246.1"; exon_number "3"; scaffold_58445 StringTie exon 2173 2380 1000 . . gene_id "MSTRG.107247"; transcript_id "MSTRG.107247.1"; exon_number "1"; scaffold_5847 StringTie exon 3263 3710 1000 . . gene_id "MSTRG.107263"; transcript_id "MSTRG.107263.1"; exon_number "1"; scaffold_58476 StringTie exon 79 306 1000 . . gene_id "MSTRG.107271"; transcript_id "MSTRG.107271.1"; exon_number "1"; scaffold_5848 StringTie exon 16506 16770 1000 . . gene_id "MSTRG.107273"; transcript_id "MSTRG.107273.1"; exon_number "1"; scaffold_585 StringTie exon 134365 134682 1000 . . gene_id "MSTRG.107291"; transcript_id "MSTRG.107291.1"; exon_number "1"; scaffold_585 StringTie exon 150108 150343 1000 . . gene_id "MSTRG.107294"; transcript_id "MSTRG.107294.1"; exon_number "1"; scaffold_585 StringTie exon 191638 192374 1000 - . gene_id "MSTRG.107297"; transcript_id "MSTRG.107297.1"; exon_number "1"; scaffold_585 StringTie exon 192822 192932 1000 - . gene_id "MSTRG.107297"; transcript_id "MSTRG.107297.1"; exon_number "2"; scaffold_585 StringTie exon 193153 193251 1000 - . gene_id "MSTRG.107297"; transcript_id "MSTRG.107297.1"; exon_number "3"; scaffold_5855 StringTie exon 28012 28185 1000 - . gene_id "MSTRG.107360"; transcript_id "MSTRG.107360.1"; exon_number "1"; scaffold_5855 StringTie exon 28455 28583 1000 - . gene_id "MSTRG.107360"; transcript_id "MSTRG.107360.1"; exon_number "2"; scaffold_5855 StringTie exon 28706 28854 1000 - . gene_id "MSTRG.107360"; transcript_id "MSTRG.107360.1"; exon_number "3"; scaffold_5855 StringTie exon 29185 29423 1000 - . gene_id "MSTRG.107360"; transcript_id "MSTRG.107360.1"; exon_number "4"; scaffold_5855 StringTie exon 29815 30097 1000 - . gene_id "MSTRG.107360"; transcript_id "MSTRG.107360.1"; exon_number "5"; scaffold_5859 StringTie exon 33471 33694 1000 . . gene_id "MSTRG.107386"; transcript_id "MSTRG.107386.1"; exon_number "1"; scaffold_586 StringTie exon 24073 24097 1000 - . gene_id "MSTRG.107396"; transcript_id "MSTRG.107396.1"; exon_number "1"; scaffold_586 StringTie exon 24634 24783 1000 - . gene_id "MSTRG.107396"; transcript_id "MSTRG.107396.1"; exon_number "2"; scaffold_586 StringTie exon 25022 25079 1000 - . gene_id "MSTRG.107396"; transcript_id "MSTRG.107396.1"; exon_number "3"; scaffold_586 StringTie exon 143453 145345 1000 . . gene_id "MSTRG.107410"; transcript_id "MSTRG.107410.1"; exon_number "1"; scaffold_586 StringTie exon 199783 200050 1000 . . gene_id "MSTRG.107416"; transcript_id "MSTRG.107416.1"; exon_number "1"; scaffold_586 StringTie exon 203256 203317 1000 + . gene_id "MSTRG.107417"; transcript_id "MSTRG.107417.1"; exon_number "1"; scaffold_586 StringTie exon 203497 203629 1000 + . gene_id "MSTRG.107417"; transcript_id "MSTRG.107417.1"; exon_number "2"; scaffold_586 StringTie exon 205294 205410 1000 + . gene_id "MSTRG.107417"; transcript_id "MSTRG.107417.1"; exon_number "3"; scaffold_586 StringTie exon 205539 205582 1000 + . gene_id "MSTRG.107417"; transcript_id "MSTRG.107417.1"; exon_number "4"; scaffold_58628 StringTie exon 801 1107 1000 . . gene_id "MSTRG.107441"; transcript_id "MSTRG.107441.1"; exon_number "1"; scaffold_58631 StringTie exon 16 2505 1000 . . gene_id "MSTRG.107446"; transcript_id "MSTRG.107446.1"; exon_number "1"; scaffold_5864 StringTie exon 9915 9954 1000 + . gene_id "MSTRG.107452"; transcript_id "MSTRG.107452.1"; exon_number "1"; scaffold_5864 StringTie exon 11315 11438 1000 + . gene_id "MSTRG.107452"; transcript_id "MSTRG.107452.1"; exon_number "2"; scaffold_5864 StringTie exon 11514 11563 1000 + . gene_id "MSTRG.107452"; transcript_id "MSTRG.107452.1"; exon_number "3"; scaffold_58658 StringTie exon 2129 2493 1000 . . gene_id "MSTRG.107461"; transcript_id "MSTRG.107461.1"; exon_number "1"; scaffold_587 StringTie exon 447597 448245 1000 . . gene_id "MSTRG.107524"; transcript_id "MSTRG.107524.1"; exon_number "1"; scaffold_587 StringTie exon 549390 549652 1000 - . gene_id "MSTRG.107533"; transcript_id "MSTRG.107533.2"; exon_number "1"; scaffold_587 StringTie exon 549854 549984 1000 - . gene_id "MSTRG.107533"; transcript_id "MSTRG.107533.2"; exon_number "2"; scaffold_587 StringTie exon 550269 550687 1000 - . gene_id "MSTRG.107533"; transcript_id "MSTRG.107533.2"; exon_number "3"; scaffold_587 StringTie exon 624174 624484 1000 . . gene_id "MSTRG.107539"; transcript_id "MSTRG.107539.1"; exon_number "1"; scaffold_58702 StringTie exon 1510 1834 1000 . . gene_id "MSTRG.107542"; transcript_id "MSTRG.107542.1"; exon_number "1"; scaffold_58710 StringTie exon 2095 2435 1000 . . gene_id "MSTRG.107554"; transcript_id "MSTRG.107554.1"; exon_number "1"; scaffold_5872 StringTie exon 22679 22890 1000 . . gene_id "MSTRG.107560"; transcript_id "MSTRG.107560.1"; exon_number "1"; scaffold_58725 StringTie exon 1167 1406 1000 . . gene_id "MSTRG.107562"; transcript_id "MSTRG.107562.1"; exon_number "1"; scaffold_5873 StringTie exon 2406 2782 1000 - . gene_id "MSTRG.107563"; transcript_id "MSTRG.107563.1"; exon_number "1"; scaffold_5873 StringTie exon 4635 5128 1000 + . gene_id "MSTRG.107564"; transcript_id "MSTRG.107564.1"; exon_number "1"; scaffold_5873 StringTie exon 15896 15989 1000 + . gene_id "MSTRG.107564"; transcript_id "MSTRG.107564.1"; exon_number "2"; scaffold_5874 StringTie exon 9448 9739 1000 . . gene_id "MSTRG.107569"; transcript_id "MSTRG.107569.1"; exon_number "1"; scaffold_58745 StringTie exon 787 1058 1000 . . gene_id "MSTRG.107572"; transcript_id "MSTRG.107572.1"; exon_number "1"; scaffold_5876 StringTie exon 9047 9079 1000 - . gene_id "MSTRG.107584"; transcript_id "MSTRG.107584.1"; exon_number "1"; scaffold_5876 StringTie exon 9182 9275 1000 - . gene_id "MSTRG.107584"; transcript_id "MSTRG.107584.1"; exon_number "2"; scaffold_5876 StringTie exon 9383 9444 1000 - . gene_id "MSTRG.107584"; transcript_id "MSTRG.107584.1"; exon_number "3"; scaffold_5876 StringTie exon 9540 9588 1000 - . gene_id "MSTRG.107584"; transcript_id "MSTRG.107584.1"; exon_number "4"; scaffold_5877 StringTie exon 23918 24168 1000 . . gene_id "MSTRG.107596"; transcript_id "MSTRG.107596.1"; exon_number "1"; scaffold_588 StringTie exon 108791 108819 1000 + . gene_id "MSTRG.107613"; transcript_id "MSTRG.107613.1"; exon_number "1"; scaffold_588 StringTie exon 109026 109184 1000 + . gene_id "MSTRG.107613"; transcript_id "MSTRG.107613.1"; exon_number "2"; scaffold_588 StringTie exon 109327 109365 1000 + . gene_id "MSTRG.107613"; transcript_id "MSTRG.107613.1"; exon_number "3"; scaffold_58845 StringTie exon 379 684 1000 . . gene_id "MSTRG.107689"; transcript_id "MSTRG.107689.1"; exon_number "1"; scaffold_589 StringTie exon 125233 126761 1000 - . gene_id "MSTRG.107728"; transcript_id "MSTRG.107728.1"; exon_number "1"; scaffold_589 StringTie exon 126948 127231 1000 - . gene_id "MSTRG.107729"; transcript_id "MSTRG.107729.1"; exon_number "1"; scaffold_589 StringTie exon 127305 127447 1000 - . gene_id "MSTRG.107729"; transcript_id "MSTRG.107729.1"; exon_number "2"; scaffold_589 StringTie exon 127560 127640 1000 - . gene_id "MSTRG.107729"; transcript_id "MSTRG.107729.1"; exon_number "3"; scaffold_589 StringTie exon 332167 332375 1000 . . gene_id "MSTRG.107759"; transcript_id "MSTRG.107759.1"; exon_number "1"; scaffold_589 StringTie exon 389268 389365 1000 + . gene_id "MSTRG.107770"; transcript_id "MSTRG.107770.1"; exon_number "1"; scaffold_589 StringTie exon 390374 390520 1000 + . gene_id "MSTRG.107770"; transcript_id "MSTRG.107770.1"; exon_number "2"; scaffold_589 StringTie exon 390658 390748 1000 + . gene_id "MSTRG.107770"; transcript_id "MSTRG.107770.1"; exon_number "3"; scaffold_589 StringTie exon 390836 390966 1000 + . gene_id "MSTRG.107770"; transcript_id "MSTRG.107770.1"; exon_number "4"; scaffold_589 StringTie exon 391180 391291 1000 + . gene_id "MSTRG.107770"; transcript_id "MSTRG.107770.1"; exon_number "5"; scaffold_589 StringTie exon 392531 392657 1000 + . gene_id "MSTRG.107770"; transcript_id "MSTRG.107770.1"; exon_number "6"; scaffold_589 StringTie exon 396638 396872 1000 . . gene_id "MSTRG.107773"; transcript_id "MSTRG.107773.1"; exon_number "1"; scaffold_58937 StringTie exon 18 708 1000 . . gene_id "MSTRG.107812"; transcript_id "MSTRG.107812.1"; exon_number "1"; scaffold_5894 StringTie exon 4575 4819 1000 . . gene_id "MSTRG.107815"; transcript_id "MSTRG.107815.1"; exon_number "1"; scaffold_5896 StringTie exon 38000 38312 1000 . . gene_id "MSTRG.107831"; transcript_id "MSTRG.107831.1"; exon_number "1"; scaffold_59 StringTie exon 113812 114119 1000 . . gene_id "MSTRG.107860"; transcript_id "MSTRG.107860.1"; exon_number "1"; scaffold_59 StringTie exon 357524 357785 1000 . . gene_id "MSTRG.107883"; transcript_id "MSTRG.107883.1"; exon_number "1"; scaffold_59 StringTie exon 371345 371412 1000 - . gene_id "MSTRG.107884"; transcript_id "MSTRG.107884.1"; exon_number "1"; scaffold_59 StringTie exon 380258 380490 1000 - . gene_id "MSTRG.107884"; transcript_id "MSTRG.107884.1"; exon_number "2"; scaffold_59 StringTie exon 380689 380752 1000 - . gene_id "MSTRG.107884"; transcript_id "MSTRG.107884.1"; exon_number "3"; scaffold_59 StringTie exon 380866 380950 1000 - . gene_id "MSTRG.107884"; transcript_id "MSTRG.107884.1"; exon_number "4"; scaffold_59 StringTie exon 381047 381161 1000 - . gene_id "MSTRG.107884"; transcript_id "MSTRG.107884.1"; exon_number "5"; scaffold_59 StringTie exon 382515 382927 1000 - . gene_id "MSTRG.107884"; transcript_id "MSTRG.107884.1"; exon_number "6"; scaffold_59 StringTie exon 384931 384982 1000 - . gene_id "MSTRG.107886"; transcript_id "MSTRG.107886.1"; exon_number "1"; scaffold_59 StringTie exon 385231 385536 1000 - . gene_id "MSTRG.107886"; transcript_id "MSTRG.107886.1"; exon_number "2"; scaffold_59 StringTie exon 641809 642148 1000 . . gene_id "MSTRG.107900"; transcript_id "MSTRG.107900.1"; exon_number "1"; scaffold_59 StringTie exon 914134 914346 1000 . . gene_id "MSTRG.107913"; transcript_id "MSTRG.107913.1"; exon_number "1"; scaffold_59 StringTie exon 1113276 1113509 1000 . . gene_id "MSTRG.107926"; transcript_id "MSTRG.107926.1"; exon_number "1"; scaffold_59 StringTie exon 1469744 1470153 1000 + . gene_id "MSTRG.107952"; transcript_id "MSTRG.107952.1"; exon_number "1"; scaffold_59 StringTie exon 1470716 1470862 1000 + . gene_id "MSTRG.107952"; transcript_id "MSTRG.107952.1"; exon_number "2"; scaffold_59 StringTie exon 1471178 1471272 1000 + . gene_id "MSTRG.107952"; transcript_id "MSTRG.107952.1"; exon_number "3"; scaffold_59 StringTie exon 1490366 1490679 1000 . . gene_id "MSTRG.107955"; transcript_id "MSTRG.107955.1"; exon_number "1"; scaffold_59 StringTie exon 1550758 1551128 1000 + . gene_id "MSTRG.107962"; transcript_id "MSTRG.107962.1"; exon_number "1"; scaffold_59 StringTie exon 1571114 1571368 1000 + . gene_id "MSTRG.107962"; transcript_id "MSTRG.107962.1"; exon_number "2"; scaffold_59 StringTie exon 1572768 1572836 1000 + . gene_id "MSTRG.107962"; transcript_id "MSTRG.107962.1"; exon_number "3"; scaffold_59 StringTie exon 1577376 1577539 1000 + . gene_id "MSTRG.107962"; transcript_id "MSTRG.107962.1"; exon_number "4"; scaffold_59 StringTie exon 1577832 1577940 1000 + . gene_id "MSTRG.107962"; transcript_id "MSTRG.107962.1"; exon_number "5"; scaffold_59 StringTie exon 1587322 1587450 1000 + . gene_id "MSTRG.107962"; transcript_id "MSTRG.107962.1"; exon_number "6"; scaffold_59 StringTie exon 1587889 1588043 1000 + . gene_id "MSTRG.107962"; transcript_id "MSTRG.107962.1"; exon_number "7"; scaffold_59 StringTie exon 1588165 1588181 1000 + . gene_id "MSTRG.107962"; transcript_id "MSTRG.107962.1"; exon_number "8"; scaffold_59 StringTie exon 1611897 1612111 1000 . . gene_id "MSTRG.107966"; transcript_id "MSTRG.107966.1"; exon_number "1"; scaffold_59 StringTie exon 1763214 1763455 1000 . . gene_id "MSTRG.107984"; transcript_id "MSTRG.107984.1"; exon_number "1"; scaffold_59 StringTie exon 1844378 1845012 1000 + . gene_id "MSTRG.107987"; transcript_id "MSTRG.107987.1"; exon_number "1"; scaffold_590 StringTie exon 288550 288821 1000 . . gene_id "MSTRG.108038"; transcript_id "MSTRG.108038.1"; exon_number "1"; scaffold_5902 StringTie exon 9993 10340 1000 . . gene_id "MSTRG.108074"; transcript_id "MSTRG.108074.1"; exon_number "1"; scaffold_59031 StringTie exon 956 1231 1000 . . gene_id "MSTRG.108081"; transcript_id "MSTRG.108081.1"; exon_number "1"; scaffold_5905 StringTie exon 28390 28715 1000 . . gene_id "MSTRG.108094"; transcript_id "MSTRG.108094.1"; exon_number "1"; scaffold_59053 StringTie exon 2153 2439 1000 . . gene_id "MSTRG.108098"; transcript_id "MSTRG.108098.1"; exon_number "1"; scaffold_5906 StringTie exon 36510 36729 1000 . . gene_id "MSTRG.108101"; transcript_id "MSTRG.108101.1"; exon_number "1"; scaffold_5907 StringTie exon 11762 12171 1000 . . gene_id "MSTRG.108105"; transcript_id "MSTRG.108105.1"; exon_number "1"; scaffold_59075 StringTie exon 1976 2184 1000 . . gene_id "MSTRG.108109"; transcript_id "MSTRG.108109.1"; exon_number "1"; scaffold_5908 StringTie exon 2964 3189 1000 . . gene_id "MSTRG.108110"; transcript_id "MSTRG.108110.1"; exon_number "1"; scaffold_591 StringTie exon 243 503 1000 . . gene_id "MSTRG.108120"; transcript_id "MSTRG.108120.1"; exon_number "1"; scaffold_591 StringTie exon 22477 22717 1000 . . gene_id "MSTRG.108124"; transcript_id "MSTRG.108124.1"; exon_number "1"; scaffold_591 StringTie exon 299879 300107 1000 . . gene_id "MSTRG.108145"; transcript_id "MSTRG.108145.1"; exon_number "1"; scaffold_591 StringTie exon 616637 616949 1000 . . gene_id "MSTRG.108166"; transcript_id "MSTRG.108166.1"; exon_number "1"; scaffold_591 StringTie exon 624752 624980 1000 . . gene_id "MSTRG.108167"; transcript_id "MSTRG.108167.1"; exon_number "1"; scaffold_59151 StringTie exon 203 571 1000 . . gene_id "MSTRG.108202"; transcript_id "MSTRG.108202.1"; exon_number "1"; scaffold_59188 StringTie exon 497 1655 1000 - . gene_id "MSTRG.108222"; transcript_id "MSTRG.108222.2"; exon_number "1"; scaffold_59188 StringTie exon 1712 1739 1000 - . gene_id "MSTRG.108222"; transcript_id "MSTRG.108222.2"; exon_number "2"; scaffold_592 StringTie exon 192074 192691 1000 . . gene_id "MSTRG.108242"; transcript_id "MSTRG.108242.1"; exon_number "1"; scaffold_592 StringTie exon 331475 331530 1000 - . gene_id "MSTRG.108257"; transcript_id "MSTRG.108257.1"; exon_number "1"; scaffold_592 StringTie exon 334565 334700 1000 - . gene_id "MSTRG.108257"; transcript_id "MSTRG.108257.1"; exon_number "2"; scaffold_592 StringTie exon 377557 378109 1000 - . gene_id "MSTRG.108257"; transcript_id "MSTRG.108257.1"; exon_number "3"; scaffold_592 StringTie exon 458353 458737 1000 - . gene_id "MSTRG.108265"; transcript_id "MSTRG.108265.1"; exon_number "1"; scaffold_5920 StringTie exon 1823 2092 1000 . . gene_id "MSTRG.108276"; transcript_id "MSTRG.108276.1"; exon_number "1"; scaffold_5920 StringTie exon 24957 25400 1000 . . gene_id "MSTRG.108277"; transcript_id "MSTRG.108277.1"; exon_number "1"; scaffold_5922 StringTie exon 28987 29320 1000 . . gene_id "MSTRG.108289"; transcript_id "MSTRG.108289.1"; exon_number "1"; scaffold_59280 StringTie exon 436 899 1000 . . gene_id "MSTRG.108317"; transcript_id "MSTRG.108317.1"; exon_number "1"; scaffold_593 StringTie exon 562748 562962 1000 . . gene_id "MSTRG.108346"; transcript_id "MSTRG.108346.1"; exon_number "1"; scaffold_59320 StringTie exon 749 1013 1000 . . gene_id "MSTRG.108365"; transcript_id "MSTRG.108365.1"; exon_number "1"; scaffold_59320 StringTie exon 1360 1449 1000 - . gene_id "MSTRG.108366"; transcript_id "MSTRG.108366.1"; exon_number "1"; scaffold_59320 StringTie exon 1672 1771 1000 - . gene_id "MSTRG.108366"; transcript_id "MSTRG.108366.1"; exon_number "2"; scaffold_59320 StringTie exon 2318 2427 1000 - . gene_id "MSTRG.108366"; transcript_id "MSTRG.108366.1"; exon_number "3"; scaffold_5935 StringTie exon 20530 20865 1000 . . gene_id "MSTRG.108386"; transcript_id "MSTRG.108386.1"; exon_number "1"; scaffold_59356 StringTie exon 1835 2064 1000 . . gene_id "MSTRG.108388"; transcript_id "MSTRG.108388.1"; exon_number "1"; scaffold_59367 StringTie exon 21 411 1000 . . gene_id "MSTRG.108391"; transcript_id "MSTRG.108391.1"; exon_number "1"; scaffold_59399 StringTie exon 417 652 1000 . . gene_id "MSTRG.108408"; transcript_id "MSTRG.108408.1"; exon_number "1"; scaffold_594 StringTie exon 128300 128508 1000 . . gene_id "MSTRG.108418"; transcript_id "MSTRG.108418.1"; exon_number "1"; scaffold_594 StringTie exon 134651 134660 1000 + . gene_id "MSTRG.108419"; transcript_id "MSTRG.108419.1"; exon_number "1"; scaffold_594 StringTie exon 141888 142117 1000 + . gene_id "MSTRG.108419"; transcript_id "MSTRG.108419.1"; exon_number "2"; scaffold_594 StringTie exon 182907 183019 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "1"; scaffold_594 StringTie exon 183297 183545 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "2"; scaffold_594 StringTie exon 183716 183827 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "3"; scaffold_594 StringTie exon 184768 184883 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "4"; scaffold_594 StringTie exon 189553 189668 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "5"; scaffold_594 StringTie exon 193544 193675 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "6"; scaffold_594 StringTie exon 195854 196001 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "7"; scaffold_594 StringTie exon 203871 204038 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "8"; scaffold_594 StringTie exon 210149 211030 1000 + . gene_id "MSTRG.108424"; transcript_id "MSTRG.108424.1"; exon_number "9"; scaffold_594 StringTie exon 581428 581541 1000 - . gene_id "MSTRG.108440"; transcript_id "MSTRG.108440.1"; exon_number "1"; scaffold_594 StringTie exon 581834 581975 1000 - . gene_id "MSTRG.108440"; transcript_id "MSTRG.108440.1"; exon_number "2"; scaffold_594 StringTie exon 607601 607865 1000 - . gene_id "MSTRG.108440"; transcript_id "MSTRG.108440.1"; exon_number "3"; scaffold_5940 StringTie exon 24471 24750 1000 . . gene_id "MSTRG.108444"; transcript_id "MSTRG.108444.1"; exon_number "1"; scaffold_59410 StringTie exon 2029 2255 1000 + . gene_id "MSTRG.108456"; transcript_id "MSTRG.108456.2"; exon_number "1"; scaffold_59428 StringTie exon 1993 2198 1000 . . gene_id "MSTRG.108463"; transcript_id "MSTRG.108463.1"; exon_number "1"; scaffold_59431 StringTie exon 2052 2419 1000 . . gene_id "MSTRG.108466"; transcript_id "MSTRG.108466.1"; exon_number "1"; scaffold_59446 StringTie exon 1755 1963 1000 . . gene_id "MSTRG.108474"; transcript_id "MSTRG.108474.1"; exon_number "1"; scaffold_59450 StringTie exon 185 549 1000 . . gene_id "MSTRG.108477"; transcript_id "MSTRG.108477.1"; exon_number "1"; scaffold_59465 StringTie exon 1224 1482 1000 . . gene_id "MSTRG.108482"; transcript_id "MSTRG.108482.1"; exon_number "1"; scaffold_59486 StringTie exon 2074 2416 1000 . . gene_id "MSTRG.108493"; transcript_id "MSTRG.108493.1"; exon_number "1"; scaffold_59488 StringTie exon 1663 2456 1000 . . gene_id "MSTRG.108495"; transcript_id "MSTRG.108495.1"; exon_number "1"; scaffold_59504 StringTie exon 451 690 1000 . . gene_id "MSTRG.108552"; transcript_id "MSTRG.108552.1"; exon_number "1"; scaffold_5952 StringTie exon 5670 5874 1000 . . gene_id "MSTRG.108558"; transcript_id "MSTRG.108558.1"; exon_number "1"; scaffold_59547 StringTie exon 1858 2056 1000 + . gene_id "MSTRG.108574"; transcript_id "MSTRG.108574.1"; exon_number "1"; scaffold_59547 StringTie exon 2172 2289 1000 + . gene_id "MSTRG.108574"; transcript_id "MSTRG.108574.1"; exon_number "2"; scaffold_59575 StringTie exon 293 499 1000 . . gene_id "MSTRG.108587"; transcript_id "MSTRG.108587.1"; exon_number "1"; scaffold_5958 StringTie exon 14818 15257 1000 . . gene_id "MSTRG.108589"; transcript_id "MSTRG.108589.1"; exon_number "1"; scaffold_596 StringTie exon 52287 52492 1000 . . gene_id "MSTRG.108601"; transcript_id "MSTRG.108601.1"; exon_number "1"; scaffold_596 StringTie exon 224452 224674 1000 . . gene_id "MSTRG.108616"; transcript_id "MSTRG.108616.1"; exon_number "1"; scaffold_596 StringTie exon 298761 298979 1000 . . gene_id "MSTRG.108619"; transcript_id "MSTRG.108619.1"; exon_number "1"; scaffold_596 StringTie exon 443677 443906 1000 . . gene_id "MSTRG.108626"; transcript_id "MSTRG.108626.1"; exon_number "1"; scaffold_596 StringTie exon 455656 455877 1000 . . gene_id "MSTRG.108629"; transcript_id "MSTRG.108629.1"; exon_number "1"; scaffold_596 StringTie exon 456824 457058 1000 . . gene_id "MSTRG.108630"; transcript_id "MSTRG.108630.1"; exon_number "1"; scaffold_5961 StringTie exon 33284 33628 1000 . . gene_id "MSTRG.108653"; transcript_id "MSTRG.108653.1"; exon_number "1"; scaffold_597 StringTie exon 289445 289663 1000 . . gene_id "MSTRG.108716"; transcript_id "MSTRG.108716.1"; exon_number "1"; scaffold_597 StringTie exon 290848 291584 1000 . . gene_id "MSTRG.108717"; transcript_id "MSTRG.108717.1"; exon_number "1"; scaffold_597 StringTie exon 472991 473021 1000 + . gene_id "MSTRG.108733"; transcript_id "MSTRG.108733.2"; exon_number "1"; scaffold_597 StringTie exon 473582 473632 1000 + . gene_id "MSTRG.108733"; transcript_id "MSTRG.108733.2"; exon_number "2"; scaffold_597 StringTie exon 474555 474625 1000 + . gene_id "MSTRG.108733"; transcript_id "MSTRG.108733.2"; exon_number "3"; scaffold_597 StringTie exon 474944 475027 1000 + . gene_id "MSTRG.108733"; transcript_id "MSTRG.108733.2"; exon_number "4"; scaffold_597 StringTie exon 475245 475348 1000 + . gene_id "MSTRG.108733"; transcript_id "MSTRG.108733.2"; exon_number "5"; scaffold_597 StringTie exon 475552 476466 1000 + . gene_id "MSTRG.108733"; transcript_id "MSTRG.108733.2"; exon_number "6"; scaffold_597 StringTie exon 517906 518132 1000 . . gene_id "MSTRG.108736"; transcript_id "MSTRG.108736.1"; exon_number "1"; scaffold_5972 StringTie exon 1176 1293 1000 + . gene_id "MSTRG.108763"; transcript_id "MSTRG.108763.2"; exon_number "1"; scaffold_5972 StringTie exon 13276 13332 1000 + . gene_id "MSTRG.108763"; transcript_id "MSTRG.108763.2"; exon_number "2"; scaffold_5972 StringTie exon 13568 13715 1000 + . gene_id "MSTRG.108763"; transcript_id "MSTRG.108763.2"; exon_number "3"; scaffold_5972 StringTie exon 33836 33898 1000 + . gene_id "MSTRG.108763"; transcript_id "MSTRG.108763.2"; exon_number "4"; scaffold_5972 StringTie exon 35754 35872 1000 + . gene_id "MSTRG.108763"; transcript_id "MSTRG.108763.2"; exon_number "5"; scaffold_59734 StringTie exon 930 1146 1000 . . gene_id "MSTRG.108767"; transcript_id "MSTRG.108767.1"; exon_number "1"; scaffold_59755 StringTie exon 750 1047 1000 . . gene_id "MSTRG.108784"; transcript_id "MSTRG.108784.1"; exon_number "1"; scaffold_59782 StringTie exon 1881 1972 1000 - . gene_id "MSTRG.108796"; transcript_id "MSTRG.108796.1"; exon_number "1"; scaffold_59782 StringTie exon 2309 2467 1000 - . gene_id "MSTRG.108796"; transcript_id "MSTRG.108796.1"; exon_number "2"; scaffold_59787 StringTie exon 2037 2358 1000 - . gene_id "MSTRG.108799"; transcript_id "MSTRG.108799.4"; exon_number "1"; scaffold_59787 StringTie exon 2438 2467 1000 - . gene_id "MSTRG.108799"; transcript_id "MSTRG.108799.4"; exon_number "2"; scaffold_598 StringTie exon 378542 378649 1000 + . gene_id "MSTRG.108830"; transcript_id "MSTRG.108830.1"; exon_number "1"; scaffold_598 StringTie exon 412961 413082 1000 + . gene_id "MSTRG.108830"; transcript_id "MSTRG.108830.1"; exon_number "2"; scaffold_598 StringTie exon 506336 506716 1000 . . gene_id "MSTRG.108834"; transcript_id "MSTRG.108834.1"; exon_number "1"; scaffold_59804 StringTie exon 273 443 1000 - . gene_id "MSTRG.108842"; transcript_id "MSTRG.108842.1"; exon_number "1"; scaffold_59804 StringTie exon 595 698 1000 - . gene_id "MSTRG.108842"; transcript_id "MSTRG.108842.1"; exon_number "2"; scaffold_59849 StringTie exon 408 712 1000 . . gene_id "MSTRG.108864"; transcript_id "MSTRG.108864.1"; exon_number "1"; scaffold_59887 StringTie exon 1416 1804 1000 . . gene_id "MSTRG.108880"; transcript_id "MSTRG.108880.1"; exon_number "1"; scaffold_599 StringTie exon 317605 317650 1000 + . gene_id "MSTRG.108901"; transcript_id "MSTRG.108901.1"; exon_number "1"; scaffold_599 StringTie exon 317752 317840 1000 + . gene_id "MSTRG.108901"; transcript_id "MSTRG.108901.1"; exon_number "2"; scaffold_599 StringTie exon 318003 318125 1000 + . gene_id "MSTRG.108901"; transcript_id "MSTRG.108901.1"; exon_number "3"; scaffold_599 StringTie exon 511846 512115 1000 . . gene_id "MSTRG.108910"; transcript_id "MSTRG.108910.1"; exon_number "1"; scaffold_599 StringTie exon 544673 544789 1000 - . gene_id "MSTRG.108914"; transcript_id "MSTRG.108914.2"; exon_number "1"; scaffold_599 StringTie exon 544856 545693 1000 - . gene_id "MSTRG.108914"; transcript_id "MSTRG.108914.2"; exon_number "2"; scaffold_59956 StringTie exon 1501 1795 1000 + . gene_id "MSTRG.108964"; transcript_id "MSTRG.108964.1"; exon_number "1"; scaffold_59964 StringTie exon 2243 2464 1000 . . gene_id "MSTRG.108967"; transcript_id "MSTRG.108967.1"; exon_number "1"; scaffold_59993 StringTie exon 1673 2118 1000 . . gene_id "MSTRG.108984"; transcript_id "MSTRG.108984.1"; exon_number "1"; scaffold_6 StringTie exon 164241 164627 1000 . . gene_id "MSTRG.108994"; transcript_id "MSTRG.108994.1"; exon_number "1"; scaffold_6 StringTie exon 356467 356685 1000 . . gene_id "MSTRG.109013"; transcript_id "MSTRG.109013.1"; exon_number "1"; scaffold_6 StringTie exon 475345 475382 1000 - . gene_id "MSTRG.109026"; transcript_id "MSTRG.109026.1"; exon_number "1"; scaffold_6 StringTie exon 475571 475666 1000 - . gene_id "MSTRG.109026"; transcript_id "MSTRG.109026.1"; exon_number "2"; scaffold_6 StringTie exon 475819 475915 1000 - . gene_id "MSTRG.109026"; transcript_id "MSTRG.109026.1"; exon_number "3"; scaffold_6 StringTie exon 479873 480045 1000 - . gene_id "MSTRG.109026"; transcript_id "MSTRG.109026.1"; exon_number "4"; scaffold_6 StringTie exon 480913 481057 1000 - . gene_id "MSTRG.109026"; transcript_id "MSTRG.109026.1"; exon_number "5"; scaffold_6 StringTie exon 533211 535233 1000 . . gene_id "MSTRG.109033"; transcript_id "MSTRG.109033.1"; exon_number "1"; scaffold_6 StringTie exon 677171 677533 1000 . . gene_id "MSTRG.109042"; transcript_id "MSTRG.109042.1"; exon_number "1"; scaffold_6 StringTie exon 721929 722212 1000 . . gene_id "MSTRG.109047"; transcript_id "MSTRG.109047.1"; exon_number "1"; scaffold_6 StringTie exon 1137454 1137701 1000 . . gene_id "MSTRG.109077"; transcript_id "MSTRG.109077.1"; exon_number "1"; scaffold_6 StringTie exon 1169095 1169360 1000 . . gene_id "MSTRG.109079"; transcript_id "MSTRG.109079.1"; exon_number "1"; scaffold_6 StringTie exon 1766439 1766680 1000 . . gene_id "MSTRG.109150"; transcript_id "MSTRG.109150.1"; exon_number "1"; scaffold_6 StringTie exon 2199354 2199592 1000 . . gene_id "MSTRG.109167"; transcript_id "MSTRG.109167.1"; exon_number "1"; scaffold_6 StringTie exon 2221161 2221370 1000 . . gene_id "MSTRG.109168"; transcript_id "MSTRG.109168.1"; exon_number "1"; scaffold_6 StringTie exon 3132102 3132341 1000 . . gene_id "MSTRG.109223"; transcript_id "MSTRG.109223.1"; exon_number "1"; scaffold_6 StringTie exon 3687393 3687705 1000 . . gene_id "MSTRG.109252"; transcript_id "MSTRG.109252.1"; exon_number "1"; scaffold_60 StringTie exon 83871 84345 1000 . . gene_id "MSTRG.109260"; transcript_id "MSTRG.109260.1"; exon_number "1"; scaffold_60 StringTie exon 223465 223895 1000 . . gene_id "MSTRG.109266"; transcript_id "MSTRG.109266.1"; exon_number "1"; scaffold_60 StringTie exon 514708 514911 1000 . . gene_id "MSTRG.109281"; transcript_id "MSTRG.109281.1"; exon_number "1"; scaffold_60 StringTie exon 881586 881843 1000 . . gene_id "MSTRG.109296"; transcript_id "MSTRG.109296.1"; exon_number "1"; scaffold_60 StringTie exon 1115540 1115701 1000 + . gene_id "MSTRG.109317"; transcript_id "MSTRG.109317.1"; exon_number "1"; scaffold_60 StringTie exon 1116658 1116754 1000 + . gene_id "MSTRG.109317"; transcript_id "MSTRG.109317.1"; exon_number "2"; scaffold_60 StringTie exon 1119456 1119627 1000 + . gene_id "MSTRG.109317"; transcript_id "MSTRG.109317.1"; exon_number "3"; scaffold_60 StringTie exon 1205084 1205359 1000 . . gene_id "MSTRG.109326"; transcript_id "MSTRG.109326.1"; exon_number "1"; scaffold_60 StringTie exon 1692655 1692795 1000 + . gene_id "MSTRG.109354"; transcript_id "MSTRG.109354.1"; exon_number "1"; scaffold_60 StringTie exon 1692942 1693278 1000 + . gene_id "MSTRG.109354"; transcript_id "MSTRG.109354.1"; exon_number "2"; scaffold_60 StringTie exon 1799374 1799626 1000 . . gene_id "MSTRG.109362"; transcript_id "MSTRG.109362.1"; exon_number "1"; scaffold_600 StringTie exon 335873 336099 1000 . . gene_id "MSTRG.109385"; transcript_id "MSTRG.109385.1"; exon_number "1"; scaffold_600 StringTie exon 539428 540049 1000 . . gene_id "MSTRG.109392"; transcript_id "MSTRG.109392.1"; exon_number "1"; scaffold_60011 StringTie exon 113 321 1000 . . gene_id "MSTRG.109408"; transcript_id "MSTRG.109408.1"; exon_number "1"; scaffold_6002 StringTie exon 18009 18671 1000 . . gene_id "MSTRG.109413"; transcript_id "MSTRG.109413.1"; exon_number "1"; scaffold_6003 StringTie exon 2158 2417 1000 - . gene_id "MSTRG.109419"; transcript_id "MSTRG.109419.1"; exon_number "1"; scaffold_6003 StringTie exon 23306 23598 1000 + . gene_id "MSTRG.109421"; transcript_id "MSTRG.109421.2"; exon_number "1"; scaffold_6003 StringTie exon 37067 37401 1000 . . gene_id "MSTRG.109423"; transcript_id "MSTRG.109423.1"; exon_number "1"; scaffold_6004 StringTie exon 17141 17577 1000 . . gene_id "MSTRG.109426"; transcript_id "MSTRG.109426.1"; exon_number "1"; scaffold_6006 StringTie exon 20163 20363 1000 . . gene_id "MSTRG.109435"; transcript_id "MSTRG.109435.1"; exon_number "1"; scaffold_60088 StringTie exon 1397 1742 1000 - . gene_id "MSTRG.109442"; transcript_id "MSTRG.109442.1"; exon_number "1"; scaffold_60088 StringTie exon 1974 2044 1000 - . gene_id "MSTRG.109442"; transcript_id "MSTRG.109442.1"; exon_number "2"; scaffold_60088 StringTie exon 2229 2453 1000 - . gene_id "MSTRG.109442"; transcript_id "MSTRG.109442.1"; exon_number "3"; scaffold_601 StringTie exon 187010 187232 1000 . . gene_id "MSTRG.109464"; transcript_id "MSTRG.109464.1"; exon_number "1"; scaffold_601 StringTie exon 267184 267744 1000 . . gene_id "MSTRG.109468"; transcript_id "MSTRG.109468.1"; exon_number "1"; scaffold_601 StringTie exon 360678 360732 1000 + . gene_id "MSTRG.109477"; transcript_id "MSTRG.109477.1"; exon_number "1"; scaffold_601 StringTie exon 363369 363503 1000 + . gene_id "MSTRG.109477"; transcript_id "MSTRG.109477.1"; exon_number "2"; scaffold_601 StringTie exon 366305 366385 1000 + . gene_id "MSTRG.109477"; transcript_id "MSTRG.109477.1"; exon_number "3"; scaffold_601 StringTie exon 404803 405063 1000 . . gene_id "MSTRG.109483"; transcript_id "MSTRG.109483.1"; exon_number "1"; scaffold_601 StringTie exon 459334 459558 1000 . . gene_id "MSTRG.109487"; transcript_id "MSTRG.109487.1"; exon_number "1"; scaffold_601 StringTie exon 584618 584886 1000 + . gene_id "MSTRG.109489"; transcript_id "MSTRG.109489.2"; exon_number "1"; scaffold_601 StringTie exon 585417 585568 1000 + . gene_id "MSTRG.109489"; transcript_id "MSTRG.109489.2"; exon_number "2"; scaffold_601 StringTie exon 592378 592618 1000 + . gene_id "MSTRG.109489"; transcript_id "MSTRG.109489.2"; exon_number "3"; scaffold_601 StringTie exon 596074 596348 1000 + . gene_id "MSTRG.109489"; transcript_id "MSTRG.109489.2"; exon_number "4"; scaffold_6011 StringTie exon 24187 24401 1000 . . gene_id "MSTRG.109502"; transcript_id "MSTRG.109502.1"; exon_number "1"; scaffold_6016 StringTie exon 4081 4140 1000 - . gene_id "MSTRG.109534"; transcript_id "MSTRG.109534.1"; exon_number "1"; scaffold_6016 StringTie exon 4455 4579 1000 - . gene_id "MSTRG.109534"; transcript_id "MSTRG.109534.1"; exon_number "2"; scaffold_6016 StringTie exon 5069 5158 1000 - . gene_id "MSTRG.109534"; transcript_id "MSTRG.109534.1"; exon_number "3"; scaffold_6016 StringTie exon 6620 6737 1000 - . gene_id "MSTRG.109534"; transcript_id "MSTRG.109534.1"; exon_number "4"; scaffold_6016 StringTie exon 8438 8454 1000 - . gene_id "MSTRG.109535"; transcript_id "MSTRG.109535.1"; exon_number "1"; scaffold_6016 StringTie exon 9063 9161 1000 - . gene_id "MSTRG.109535"; transcript_id "MSTRG.109535.1"; exon_number "2"; scaffold_6016 StringTie exon 9327 9839 1000 - . gene_id "MSTRG.109535"; transcript_id "MSTRG.109535.1"; exon_number "3"; scaffold_6016 StringTie exon 22484 22736 1000 . . gene_id "MSTRG.109536"; transcript_id "MSTRG.109536.1"; exon_number "1"; scaffold_6017 StringTie exon 9577 9993 1000 . . gene_id "MSTRG.109543"; transcript_id "MSTRG.109543.1"; exon_number "1"; scaffold_60170 StringTie exon 673 883 1000 . . gene_id "MSTRG.109547"; transcript_id "MSTRG.109547.1"; exon_number "1"; scaffold_60181 StringTie exon 63 319 1000 . . gene_id "MSTRG.109552"; transcript_id "MSTRG.109552.1"; exon_number "1"; scaffold_6019 StringTie exon 31002 31171 1000 - . gene_id "MSTRG.109555"; transcript_id "MSTRG.109555.1"; exon_number "1"; scaffold_6019 StringTie exon 31733 31770 1000 - . gene_id "MSTRG.109555"; transcript_id "MSTRG.109555.1"; exon_number "2"; scaffold_6019 StringTie exon 33478 33535 1000 - . gene_id "MSTRG.109555"; transcript_id "MSTRG.109555.1"; exon_number "3"; scaffold_602 StringTie exon 240719 240989 1000 . . gene_id "MSTRG.109565"; transcript_id "MSTRG.109565.1"; exon_number "1"; scaffold_602 StringTie exon 361980 362232 1000 . . gene_id "MSTRG.109568"; transcript_id "MSTRG.109568.1"; exon_number "1"; scaffold_60213 StringTie exon 940 1241 1000 . . gene_id "MSTRG.109585"; transcript_id "MSTRG.109585.1"; exon_number "1"; scaffold_6024 StringTie exon 36161 36361 1000 . . gene_id "MSTRG.109595"; transcript_id "MSTRG.109595.1"; exon_number "1"; scaffold_6025 StringTie exon 9372 9393 1000 - . gene_id "MSTRG.109601"; transcript_id "MSTRG.109601.1"; exon_number "1"; scaffold_6025 StringTie exon 9783 9921 1000 - . gene_id "MSTRG.109601"; transcript_id "MSTRG.109601.1"; exon_number "2"; scaffold_6025 StringTie exon 10044 10144 1000 - . gene_id "MSTRG.109601"; transcript_id "MSTRG.109601.1"; exon_number "3"; scaffold_6025 StringTie exon 10320 10510 1000 - . gene_id "MSTRG.109601"; transcript_id "MSTRG.109601.1"; exon_number "4"; scaffold_6025 StringTie exon 11327 11537 1000 - . gene_id "MSTRG.109601"; transcript_id "MSTRG.109601.1"; exon_number "5"; scaffold_6025 StringTie exon 11656 11802 1000 - . gene_id "MSTRG.109601"; transcript_id "MSTRG.109601.1"; exon_number "6"; scaffold_6025 StringTie exon 13338 13451 1000 - . gene_id "MSTRG.109601"; transcript_id "MSTRG.109601.1"; exon_number "7"; scaffold_6025 StringTie exon 13581 13700 1000 - . gene_id "MSTRG.109601"; transcript_id "MSTRG.109601.1"; exon_number "8"; scaffold_60250 StringTie exon 1710 1918 1000 . . gene_id "MSTRG.109608"; transcript_id "MSTRG.109608.1"; exon_number "1"; scaffold_6026 StringTie exon 9360 9718 1000 . . gene_id "MSTRG.109610"; transcript_id "MSTRG.109610.1"; exon_number "1"; scaffold_603 StringTie exon 118311 118447 1000 - . gene_id "MSTRG.109632"; transcript_id "MSTRG.109632.1"; exon_number "1"; scaffold_603 StringTie exon 118799 118876 1000 - . gene_id "MSTRG.109632"; transcript_id "MSTRG.109632.1"; exon_number "2"; scaffold_603 StringTie exon 337334 337736 1000 + . gene_id "MSTRG.109645"; transcript_id "MSTRG.109645.1"; exon_number "1"; scaffold_603 StringTie exon 346287 346413 1000 + . gene_id "MSTRG.109645"; transcript_id "MSTRG.109645.1"; exon_number "2"; scaffold_603 StringTie exon 346615 346686 1000 + . gene_id "MSTRG.109645"; transcript_id "MSTRG.109645.1"; exon_number "3"; scaffold_603 StringTie exon 573276 573483 1000 . . gene_id "MSTRG.109655"; transcript_id "MSTRG.109655.1"; exon_number "1"; scaffold_6031 StringTie exon 27862 28071 1000 . . gene_id "MSTRG.109671"; transcript_id "MSTRG.109671.1"; exon_number "1"; scaffold_60310 StringTie exon 1917 2343 1000 . . gene_id "MSTRG.109673"; transcript_id "MSTRG.109673.1"; exon_number "1"; scaffold_60337 StringTie exon 794 831 1000 - . gene_id "MSTRG.109688"; transcript_id "MSTRG.109688.1"; exon_number "1"; scaffold_60337 StringTie exon 1046 1209 1000 - . gene_id "MSTRG.109688"; transcript_id "MSTRG.109688.1"; exon_number "2"; scaffold_60337 StringTie exon 1866 1930 1000 - . gene_id "MSTRG.109688"; transcript_id "MSTRG.109688.1"; exon_number "3"; scaffold_60369 StringTie exon 1212 1413 1000 . . gene_id "MSTRG.109712"; transcript_id "MSTRG.109712.1"; exon_number "1"; scaffold_6038 StringTie exon 24746 24829 1000 - . gene_id "MSTRG.109720"; transcript_id "MSTRG.109720.1"; exon_number "1"; scaffold_6038 StringTie exon 25760 25956 1000 - . gene_id "MSTRG.109720"; transcript_id "MSTRG.109720.1"; exon_number "2"; scaffold_6038 StringTie exon 30039 30171 1000 - . gene_id "MSTRG.109720"; transcript_id "MSTRG.109720.1"; exon_number "3"; scaffold_60381 StringTie exon 313 684 1000 . . gene_id "MSTRG.109722"; transcript_id "MSTRG.109722.1"; exon_number "1"; scaffold_60387 StringTie exon 511 1850 1000 . . gene_id "MSTRG.109725"; transcript_id "MSTRG.109725.1"; exon_number "1"; scaffold_604 StringTie exon 21622 21961 1000 . . gene_id "MSTRG.109731"; transcript_id "MSTRG.109731.1"; exon_number "1"; scaffold_604 StringTie exon 320352 320833 1000 . . gene_id "MSTRG.109744"; transcript_id "MSTRG.109744.1"; exon_number "1"; scaffold_604 StringTie exon 619736 620129 1000 . . gene_id "MSTRG.109757"; transcript_id "MSTRG.109757.1"; exon_number "1"; scaffold_6041 StringTie exon 14268 14309 1000 - . gene_id "MSTRG.109767"; transcript_id "MSTRG.109767.1"; exon_number "1"; scaffold_6041 StringTie exon 17997 18309 1000 - . gene_id "MSTRG.109767"; transcript_id "MSTRG.109767.1"; exon_number "2"; scaffold_6042 StringTie exon 11997 12137 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "1"; scaffold_6042 StringTie exon 13259 13341 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "2"; scaffold_6042 StringTie exon 13469 13534 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "3"; scaffold_6042 StringTie exon 14367 14459 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "4"; scaffold_6042 StringTie exon 14695 14784 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "5"; scaffold_6042 StringTie exon 14912 14990 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "6"; scaffold_6042 StringTie exon 22352 22422 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "7"; scaffold_6042 StringTie exon 22585 22671 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "8"; scaffold_6042 StringTie exon 22913 23145 1000 + . gene_id "MSTRG.109775"; transcript_id "MSTRG.109775.1"; exon_number "9"; scaffold_6046 StringTie exon 11 449 1000 . . gene_id "MSTRG.109794"; transcript_id "MSTRG.109794.1"; exon_number "1"; scaffold_6047 StringTie exon 24868 25204 1000 . . gene_id "MSTRG.109798"; transcript_id "MSTRG.109798.1"; exon_number "1"; scaffold_60475 StringTie exon 1978 2439 1000 . . gene_id "MSTRG.109802"; transcript_id "MSTRG.109802.1"; exon_number "1"; scaffold_605 StringTie exon 32381 32612 1000 . . gene_id "MSTRG.109811"; transcript_id "MSTRG.109811.1"; exon_number "1"; scaffold_605 StringTie exon 57807 58253 1000 . . gene_id "MSTRG.109814"; transcript_id "MSTRG.109814.1"; exon_number "1"; scaffold_605 StringTie exon 357090 357289 1000 . . gene_id "MSTRG.109827"; transcript_id "MSTRG.109827.1"; exon_number "1"; scaffold_605 StringTie exon 599999 600218 1000 . . gene_id "MSTRG.109850"; transcript_id "MSTRG.109850.1"; exon_number "1"; scaffold_6055 StringTie exon 21100 21346 1000 . . gene_id "MSTRG.109877"; transcript_id "MSTRG.109877.1"; exon_number "1"; scaffold_60579 StringTie exon 155 613 1000 + . gene_id "MSTRG.109889"; transcript_id "MSTRG.109889.1"; exon_number "1"; scaffold_60579 StringTie exon 988 2431 1000 + . gene_id "MSTRG.109889"; transcript_id "MSTRG.109889.1"; exon_number "2"; scaffold_60582 StringTie exon 10 523 1000 . . gene_id "MSTRG.109894"; transcript_id "MSTRG.109894.1"; exon_number "1"; scaffold_606 StringTie exon 54265 54490 1000 . . gene_id "MSTRG.109904"; transcript_id "MSTRG.109904.1"; exon_number "1"; scaffold_606 StringTie exon 61113 61148 1000 + . gene_id "MSTRG.109907"; transcript_id "MSTRG.109907.1"; exon_number "1"; scaffold_606 StringTie exon 61523 61788 1000 + . gene_id "MSTRG.109907"; transcript_id "MSTRG.109907.1"; exon_number "2"; scaffold_60604 StringTie exon 924 1142 1000 . . gene_id "MSTRG.109943"; transcript_id "MSTRG.109943.1"; exon_number "1"; scaffold_60629 StringTie exon 1913 2414 1000 . . gene_id "MSTRG.109970"; transcript_id "MSTRG.109970.1"; exon_number "1"; scaffold_6066 StringTie exon 23045 23105 1000 + . gene_id "MSTRG.109990"; transcript_id "MSTRG.109990.1"; exon_number "1"; scaffold_6066 StringTie exon 23308 23605 1000 + . gene_id "MSTRG.109990"; transcript_id "MSTRG.109990.1"; exon_number "2"; scaffold_6066 StringTie exon 23770 24044 1000 + . gene_id "MSTRG.109990"; transcript_id "MSTRG.109990.1"; exon_number "3"; scaffold_60683 StringTie exon 122 441 1000 . . gene_id "MSTRG.110006"; transcript_id "MSTRG.110006.1"; exon_number "1"; scaffold_607 StringTie exon 95475 96138 1000 . . gene_id "MSTRG.110014"; transcript_id "MSTRG.110014.1"; exon_number "1"; scaffold_607 StringTie exon 256911 257994 1000 . . gene_id "MSTRG.110023"; transcript_id "MSTRG.110023.1"; exon_number "1"; scaffold_607 StringTie exon 300753 301006 1000 . . gene_id "MSTRG.110026"; transcript_id "MSTRG.110026.1"; exon_number "1"; scaffold_608 StringTie exon 469441 469652 1000 . . gene_id "MSTRG.110136"; transcript_id "MSTRG.110136.1"; exon_number "1"; scaffold_60801 StringTie exon 2218 2421 1000 . . gene_id "MSTRG.110150"; transcript_id "MSTRG.110150.1"; exon_number "1"; scaffold_6081 StringTie exon 4772 5022 1000 . . gene_id "MSTRG.110156"; transcript_id "MSTRG.110156.1"; exon_number "1"; scaffold_60821 StringTie exon 603 2438 1000 . . gene_id "MSTRG.110165"; transcript_id "MSTRG.110165.1"; exon_number "1"; scaffold_6086 StringTie exon 32113 32439 1000 . . gene_id "MSTRG.110194"; transcript_id "MSTRG.110194.1"; exon_number "1"; scaffold_60867 StringTie exon 1424 1718 1000 . . gene_id "MSTRG.110199"; transcript_id "MSTRG.110199.1"; exon_number "1"; scaffold_60876 StringTie exon 331 592 1000 . . gene_id "MSTRG.110203"; transcript_id "MSTRG.110203.1"; exon_number "1"; scaffold_6088 StringTie exon 22933 23171 1000 . . gene_id "MSTRG.110207"; transcript_id "MSTRG.110207.1"; exon_number "1"; scaffold_60897 StringTie exon 2029 2278 1000 . . gene_id "MSTRG.110218"; transcript_id "MSTRG.110218.1"; exon_number "1"; scaffold_609 StringTie exon 157531 157771 1000 . . gene_id "MSTRG.110228"; transcript_id "MSTRG.110228.1"; exon_number "1"; scaffold_609 StringTie exon 187729 188024 1000 . . gene_id "MSTRG.110235"; transcript_id "MSTRG.110235.1"; exon_number "1"; scaffold_609 StringTie exon 484650 485591 1000 - . gene_id "MSTRG.110256"; transcript_id "MSTRG.110256.1"; exon_number "1"; scaffold_609 StringTie exon 485712 485833 1000 - . gene_id "MSTRG.110256"; transcript_id "MSTRG.110256.1"; exon_number "2"; scaffold_609 StringTie exon 486715 486848 1000 - . gene_id "MSTRG.110256"; transcript_id "MSTRG.110256.1"; exon_number "3"; scaffold_609 StringTie exon 496085 496264 1000 - . gene_id "MSTRG.110256"; transcript_id "MSTRG.110256.1"; exon_number "4"; scaffold_609 StringTie exon 496563 496604 1000 - . gene_id "MSTRG.110256"; transcript_id "MSTRG.110256.1"; exon_number "5"; scaffold_609 StringTie exon 619702 619822 1000 - . gene_id "MSTRG.110272"; transcript_id "MSTRG.110272.1"; exon_number "1"; scaffold_609 StringTie exon 619888 619992 1000 - . gene_id "MSTRG.110272"; transcript_id "MSTRG.110272.1"; exon_number "2"; scaffold_609 StringTie exon 620094 620146 1000 - . gene_id "MSTRG.110272"; transcript_id "MSTRG.110272.1"; exon_number "3"; scaffold_609 StringTie exon 624058 624317 1000 . . gene_id "MSTRG.110274"; transcript_id "MSTRG.110274.1"; exon_number "1"; scaffold_6091 StringTie exon 688 945 1000 . . gene_id "MSTRG.110284"; transcript_id "MSTRG.110284.1"; exon_number "1"; scaffold_6093 StringTie exon 19948 20288 1000 . . gene_id "MSTRG.110297"; transcript_id "MSTRG.110297.1"; exon_number "1"; scaffold_60971 StringTie exon 1064 1669 1000 . . gene_id "MSTRG.110324"; transcript_id "MSTRG.110324.1"; exon_number "1"; scaffold_61 StringTie exon 501274 501518 1000 + . gene_id "MSTRG.110365"; transcript_id "MSTRG.110365.1"; exon_number "1"; scaffold_61 StringTie exon 502266 502438 1000 + . gene_id "MSTRG.110365"; transcript_id "MSTRG.110365.1"; exon_number "2"; scaffold_61 StringTie exon 516023 516163 1000 + . gene_id "MSTRG.110365"; transcript_id "MSTRG.110365.1"; exon_number "3"; scaffold_61 StringTie exon 521912 521967 1000 + . gene_id "MSTRG.110365"; transcript_id "MSTRG.110365.1"; exon_number "4"; scaffold_61 StringTie exon 522212 522228 1000 + . gene_id "MSTRG.110365"; transcript_id "MSTRG.110365.1"; exon_number "5"; scaffold_61 StringTie exon 846103 846352 1000 . . gene_id "MSTRG.110407"; transcript_id "MSTRG.110407.1"; exon_number "1"; scaffold_61 StringTie exon 1176385 1176629 1000 . . gene_id "MSTRG.110436"; transcript_id "MSTRG.110436.1"; exon_number "1"; scaffold_61 StringTie exon 1751995 1753082 1000 - . gene_id "MSTRG.110476"; transcript_id "MSTRG.110476.2"; exon_number "1"; scaffold_61 StringTie exon 1753309 1753467 1000 - . gene_id "MSTRG.110476"; transcript_id "MSTRG.110476.2"; exon_number "2"; scaffold_61 StringTie exon 1753799 1754003 1000 - . gene_id "MSTRG.110476"; transcript_id "MSTRG.110476.2"; exon_number "3"; scaffold_61 StringTie exon 1754330 1754506 1000 - . gene_id "MSTRG.110476"; transcript_id "MSTRG.110476.2"; exon_number "4"; scaffold_61 StringTie exon 1756499 1756659 1000 - . gene_id "MSTRG.110476"; transcript_id "MSTRG.110476.2"; exon_number "5"; scaffold_61 StringTie exon 1757726 1757867 1000 - . gene_id "MSTRG.110476"; transcript_id "MSTRG.110476.2"; exon_number "6"; scaffold_61 StringTie exon 1758231 1758357 1000 - . gene_id "MSTRG.110476"; transcript_id "MSTRG.110476.2"; exon_number "7"; scaffold_61 StringTie exon 2015280 2015463 1000 + . gene_id "MSTRG.110505"; transcript_id "MSTRG.110505.1"; exon_number "1"; scaffold_61 StringTie exon 2016243 2016492 1000 + . gene_id "MSTRG.110505"; transcript_id "MSTRG.110505.1"; exon_number "2"; scaffold_610 StringTie exon 205808 205878 1000 - . gene_id "MSTRG.110534"; transcript_id "MSTRG.110534.1"; exon_number "1"; scaffold_610 StringTie exon 206257 206398 1000 - . gene_id "MSTRG.110534"; transcript_id "MSTRG.110534.1"; exon_number "2"; scaffold_610 StringTie exon 230343 230553 1000 . . gene_id "MSTRG.110536"; transcript_id "MSTRG.110536.1"; exon_number "1"; scaffold_610 StringTie exon 301971 302211 1000 . . gene_id "MSTRG.110543"; transcript_id "MSTRG.110543.1"; exon_number "1"; scaffold_610 StringTie exon 361284 361595 1000 . . gene_id "MSTRG.110549"; transcript_id "MSTRG.110549.1"; exon_number "1"; scaffold_610 StringTie exon 371357 372008 1000 . . gene_id "MSTRG.110551"; transcript_id "MSTRG.110551.1"; exon_number "1"; scaffold_610 StringTie exon 384277 384481 1000 . . gene_id "MSTRG.110555"; transcript_id "MSTRG.110555.1"; exon_number "1"; scaffold_610 StringTie exon 416707 416935 1000 . . gene_id "MSTRG.110558"; transcript_id "MSTRG.110558.1"; exon_number "1"; scaffold_610 StringTie exon 458086 458103 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "1"; scaffold_610 StringTie exon 458436 458534 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "2"; scaffold_610 StringTie exon 458720 458818 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "3"; scaffold_610 StringTie exon 460584 460682 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "4"; scaffold_610 StringTie exon 460850 460951 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "5"; scaffold_610 StringTie exon 461094 461192 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "6"; scaffold_610 StringTie exon 461746 461943 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "7"; scaffold_610 StringTie exon 462048 462146 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "8"; scaffold_610 StringTie exon 462468 462566 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "9"; scaffold_610 StringTie exon 462689 462787 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "10"; scaffold_610 StringTie exon 470458 470606 1000 + . gene_id "MSTRG.110560"; transcript_id "MSTRG.110560.1"; exon_number "11"; scaffold_61032 StringTie exon 44 283 1000 . . gene_id "MSTRG.110595"; transcript_id "MSTRG.110595.1"; exon_number "1"; scaffold_6107 StringTie exon 37058 37096 1000 - . gene_id "MSTRG.110619"; transcript_id "MSTRG.110619.1"; exon_number "1"; scaffold_6107 StringTie exon 37822 38003 1000 - . gene_id "MSTRG.110619"; transcript_id "MSTRG.110619.1"; exon_number "2"; scaffold_6107 StringTie exon 38092 38387 1000 - . gene_id "MSTRG.110619"; transcript_id "MSTRG.110619.1"; exon_number "3"; scaffold_61072 StringTie exon 1936 2408 1000 . . gene_id "MSTRG.110620"; transcript_id "MSTRG.110620.1"; exon_number "1"; scaffold_611 StringTie exon 35026 35817 1000 . . gene_id "MSTRG.110633"; transcript_id "MSTRG.110633.1"; exon_number "1"; scaffold_611 StringTie exon 386121 386339 1000 + . gene_id "MSTRG.110647"; transcript_id "MSTRG.110647.2"; exon_number "1"; scaffold_611 StringTie exon 387072 387299 1000 + . gene_id "MSTRG.110647"; transcript_id "MSTRG.110647.2"; exon_number "2"; scaffold_611 StringTie exon 387465 387677 1000 + . gene_id "MSTRG.110647"; transcript_id "MSTRG.110647.2"; exon_number "3"; scaffold_611 StringTie exon 387812 387929 1000 + . gene_id "MSTRG.110647"; transcript_id "MSTRG.110647.2"; exon_number "4"; scaffold_611 StringTie exon 388023 389760 1000 + . gene_id "MSTRG.110647"; transcript_id "MSTRG.110647.2"; exon_number "5"; scaffold_6110 StringTie exon 29862 30232 1000 . . gene_id "MSTRG.110664"; transcript_id "MSTRG.110664.1"; exon_number "1"; scaffold_61119 StringTie exon 1354 1556 1000 . . gene_id "MSTRG.110677"; transcript_id "MSTRG.110677.1"; exon_number "1"; scaffold_6113 StringTie exon 5237 5574 1000 . . gene_id "MSTRG.110681"; transcript_id "MSTRG.110681.1"; exon_number "1"; scaffold_61167 StringTie exon 621 1909 1000 - . gene_id "MSTRG.110710"; transcript_id "MSTRG.110710.1"; exon_number "1"; scaffold_61167 StringTie exon 2125 2224 1000 - . gene_id "MSTRG.110710"; transcript_id "MSTRG.110710.1"; exon_number "2"; scaffold_61175 StringTie exon 1764 1972 1000 . . gene_id "MSTRG.110713"; transcript_id "MSTRG.110713.1"; exon_number "1"; scaffold_6118 StringTie exon 8135 8180 1000 + . gene_id "MSTRG.110715"; transcript_id "MSTRG.110715.1"; exon_number "1"; scaffold_6118 StringTie exon 8383 8477 1000 + . gene_id "MSTRG.110715"; transcript_id "MSTRG.110715.1"; exon_number "2"; scaffold_6118 StringTie exon 9009 9066 1000 + . gene_id "MSTRG.110715"; transcript_id "MSTRG.110715.1"; exon_number "3"; scaffold_6118 StringTie exon 9383 10324 1000 + . gene_id "MSTRG.110715"; transcript_id "MSTRG.110715.1"; exon_number "4"; scaffold_61206 StringTie exon 1755 1986 1000 . . gene_id "MSTRG.110759"; transcript_id "MSTRG.110759.1"; exon_number "1"; scaffold_61272 StringTie exon 227 588 1000 . . gene_id "MSTRG.110794"; transcript_id "MSTRG.110794.1"; exon_number "1"; scaffold_61275 StringTie exon 441 672 1000 . . gene_id "MSTRG.110795"; transcript_id "MSTRG.110795.1"; exon_number "1"; scaffold_613 StringTie exon 137745 138014 1000 . . gene_id "MSTRG.110809"; transcript_id "MSTRG.110809.1"; exon_number "1"; scaffold_613 StringTie exon 190245 190453 1000 . . gene_id "MSTRG.110813"; transcript_id "MSTRG.110813.1"; exon_number "1"; scaffold_613 StringTie exon 340139 340583 1000 . . gene_id "MSTRG.110825"; transcript_id "MSTRG.110825.1"; exon_number "1"; scaffold_613 StringTie exon 593003 593360 1000 . . gene_id "MSTRG.110835"; transcript_id "MSTRG.110835.1"; exon_number "1"; scaffold_6131 StringTie exon 11698 12070 1000 . . gene_id "MSTRG.110845"; transcript_id "MSTRG.110845.1"; exon_number "1"; scaffold_61365 StringTie exon 706 1334 1000 . . gene_id "MSTRG.110869"; transcript_id "MSTRG.110869.1"; exon_number "1"; scaffold_614 StringTie exon 42103 42171 1000 - . gene_id "MSTRG.110893"; transcript_id "MSTRG.110893.1"; exon_number "1"; scaffold_614 StringTie exon 44616 44886 1000 - . gene_id "MSTRG.110893"; transcript_id "MSTRG.110893.1"; exon_number "2"; scaffold_614 StringTie exon 98699 99363 1000 . . gene_id "MSTRG.110902"; transcript_id "MSTRG.110902.1"; exon_number "1"; scaffold_614 StringTie exon 220124 220338 1000 . . gene_id "MSTRG.110911"; transcript_id "MSTRG.110911.1"; exon_number "1"; scaffold_614 StringTie exon 227494 227720 1000 . . gene_id "MSTRG.110912"; transcript_id "MSTRG.110912.1"; exon_number "1"; scaffold_614 StringTie exon 239752 240029 1000 . . gene_id "MSTRG.110914"; transcript_id "MSTRG.110914.1"; exon_number "1"; scaffold_614 StringTie exon 534733 535156 1000 . . gene_id "MSTRG.110932"; transcript_id "MSTRG.110932.1"; exon_number "1"; scaffold_614 StringTie exon 572589 572771 1000 + . gene_id "MSTRG.110936"; transcript_id "MSTRG.110936.1"; exon_number "1"; scaffold_614 StringTie exon 574267 574454 1000 + . gene_id "MSTRG.110936"; transcript_id "MSTRG.110936.1"; exon_number "2"; scaffold_614 StringTie exon 614193 614526 1000 - . gene_id "MSTRG.110939"; transcript_id "MSTRG.110939.1"; exon_number "1"; scaffold_614 StringTie exon 614759 614877 1000 - . gene_id "MSTRG.110939"; transcript_id "MSTRG.110939.1"; exon_number "2"; scaffold_6140 StringTie exon 31310 31600 1000 . . gene_id "MSTRG.110943"; transcript_id "MSTRG.110943.1"; exon_number "1"; scaffold_6144 StringTie exon 30446 30805 1000 . . gene_id "MSTRG.110965"; transcript_id "MSTRG.110965.1"; exon_number "1"; scaffold_6147 StringTie exon 37784 38093 1000 . . gene_id "MSTRG.110978"; transcript_id "MSTRG.110978.1"; exon_number "1"; scaffold_6149 StringTie exon 6098 6499 1000 . . gene_id "MSTRG.110988"; transcript_id "MSTRG.110988.1"; exon_number "1"; scaffold_615 StringTie exon 26726 26947 1000 . . gene_id "MSTRG.110992"; transcript_id "MSTRG.110992.1"; exon_number "1"; scaffold_616 StringTie exon 309849 309902 1000 - . gene_id "MSTRG.111106"; transcript_id "MSTRG.111106.1"; exon_number "1"; scaffold_616 StringTie exon 310078 310301 1000 - . gene_id "MSTRG.111106"; transcript_id "MSTRG.111106.1"; exon_number "2"; scaffold_616 StringTie exon 429996 430211 1000 - . gene_id "MSTRG.111123"; transcript_id "MSTRG.111123.2"; exon_number "1"; scaffold_616 StringTie exon 431965 432152 1000 - . gene_id "MSTRG.111123"; transcript_id "MSTRG.111123.2"; exon_number "2"; scaffold_616 StringTie exon 433836 433951 1000 - . gene_id "MSTRG.111123"; transcript_id "MSTRG.111123.2"; exon_number "3"; scaffold_616 StringTie exon 434050 434134 1000 - . gene_id "MSTRG.111123"; transcript_id "MSTRG.111123.2"; exon_number "4"; scaffold_616 StringTie exon 435036 435186 1000 - . gene_id "MSTRG.111123"; transcript_id "MSTRG.111123.2"; exon_number "5"; scaffold_616 StringTie exon 569889 570136 1000 . . gene_id "MSTRG.111144"; transcript_id "MSTRG.111144.1"; exon_number "1"; scaffold_61600 StringTie exon 2007 2344 1000 . . gene_id "MSTRG.111147"; transcript_id "MSTRG.111147.1"; exon_number "1"; scaffold_61620 StringTie exon 89 127 1000 + . gene_id "MSTRG.111160"; transcript_id "MSTRG.111160.1"; exon_number "1"; scaffold_61620 StringTie exon 724 941 1000 + . gene_id "MSTRG.111160"; transcript_id "MSTRG.111160.1"; exon_number "2"; scaffold_61620 StringTie exon 1188 1338 1000 + . gene_id "MSTRG.111160"; transcript_id "MSTRG.111160.1"; exon_number "3"; scaffold_61620 StringTie exon 1480 1689 1000 + . gene_id "MSTRG.111160"; transcript_id "MSTRG.111160.1"; exon_number "4"; scaffold_61620 StringTie exon 1912 2401 1000 + . gene_id "MSTRG.111160"; transcript_id "MSTRG.111160.1"; exon_number "5"; scaffold_61658 StringTie exon 627 1348 1000 . . gene_id "MSTRG.111180"; transcript_id "MSTRG.111180.1"; exon_number "1"; scaffold_6167 StringTie exon 17044 17244 1000 . . gene_id "MSTRG.111187"; transcript_id "MSTRG.111187.1"; exon_number "1"; scaffold_617 StringTie exon 117871 118113 1000 . . gene_id "MSTRG.111202"; transcript_id "MSTRG.111202.1"; exon_number "1"; scaffold_617 StringTie exon 267196 268074 1000 . . gene_id "MSTRG.111207"; transcript_id "MSTRG.111207.1"; exon_number "1"; scaffold_617 StringTie exon 305490 305727 1000 . . gene_id "MSTRG.111211"; transcript_id "MSTRG.111211.1"; exon_number "1"; scaffold_61736 StringTie exon 1414 1650 1000 . . gene_id "MSTRG.111258"; transcript_id "MSTRG.111258.1"; exon_number "1"; scaffold_6175 StringTie exon 36006 36211 1000 . . gene_id "MSTRG.111269"; transcript_id "MSTRG.111269.1"; exon_number "1"; scaffold_61764 StringTie exon 1016 1233 1000 . . gene_id "MSTRG.111276"; transcript_id "MSTRG.111276.1"; exon_number "1"; scaffold_6179 StringTie exon 13481 13728 1000 . . gene_id "MSTRG.111291"; transcript_id "MSTRG.111291.1"; exon_number "1"; scaffold_618 StringTie exon 11379 11656 1000 . . gene_id "MSTRG.111297"; transcript_id "MSTRG.111297.1"; exon_number "1"; scaffold_618 StringTie exon 432510 432812 1000 . . gene_id "MSTRG.111320"; transcript_id "MSTRG.111320.1"; exon_number "1"; scaffold_6182 StringTie exon 25400 25790 1000 . . gene_id "MSTRG.111339"; transcript_id "MSTRG.111339.1"; exon_number "1"; scaffold_61821 StringTie exon 2046 2219 1000 - . gene_id "MSTRG.111342"; transcript_id "MSTRG.111342.1"; exon_number "1"; scaffold_61821 StringTie exon 2340 2397 1000 - . gene_id "MSTRG.111342"; transcript_id "MSTRG.111342.1"; exon_number "2"; scaffold_6187 StringTie exon 482 586 1000 + . gene_id "MSTRG.111372"; transcript_id "MSTRG.111372.1"; exon_number "1"; scaffold_6187 StringTie exon 850 1037 1000 + . gene_id "MSTRG.111372"; transcript_id "MSTRG.111372.1"; exon_number "2"; scaffold_6188 StringTie exon 20226 20439 1000 . . gene_id "MSTRG.111387"; transcript_id "MSTRG.111387.1"; exon_number "1"; scaffold_619 StringTie exon 323373 323618 1000 . . gene_id "MSTRG.111406"; transcript_id "MSTRG.111406.1"; exon_number "1"; scaffold_619 StringTie exon 478749 478959 1000 . . gene_id "MSTRG.111418"; transcript_id "MSTRG.111418.1"; exon_number "1"; scaffold_619 StringTie exon 551802 552259 1000 - . gene_id "MSTRG.111422"; transcript_id "MSTRG.111422.1"; exon_number "1"; scaffold_619 StringTie exon 552458 552537 1000 - . gene_id "MSTRG.111422"; transcript_id "MSTRG.111422.1"; exon_number "2"; scaffold_619 StringTie exon 552770 552879 1000 - . gene_id "MSTRG.111422"; transcript_id "MSTRG.111422.1"; exon_number "3"; scaffold_619 StringTie exon 553624 553696 1000 - . gene_id "MSTRG.111422"; transcript_id "MSTRG.111422.1"; exon_number "4"; scaffold_619 StringTie exon 553939 554022 1000 - . gene_id "MSTRG.111422"; transcript_id "MSTRG.111422.1"; exon_number "5"; scaffold_619 StringTie exon 554121 554206 1000 - . gene_id "MSTRG.111422"; transcript_id "MSTRG.111422.1"; exon_number "6"; scaffold_619 StringTie exon 555837 556007 1000 - . gene_id "MSTRG.111422"; transcript_id "MSTRG.111422.1"; exon_number "7"; scaffold_6199 StringTie exon 37115 37352 1000 . . gene_id "MSTRG.111481"; transcript_id "MSTRG.111481.1"; exon_number "1"; scaffold_61992 StringTie exon 452 661 1000 . . gene_id "MSTRG.111482"; transcript_id "MSTRG.111482.1"; exon_number "1"; scaffold_62 StringTie exon 214724 214931 1000 . . gene_id "MSTRG.111494"; transcript_id "MSTRG.111494.1"; exon_number "1"; scaffold_62 StringTie exon 271927 272052 1000 - . gene_id "MSTRG.111499"; transcript_id "MSTRG.111499.1"; exon_number "1"; scaffold_62 StringTie exon 272140 272256 1000 - . gene_id "MSTRG.111499"; transcript_id "MSTRG.111499.1"; exon_number "2"; scaffold_62 StringTie exon 273364 273434 1000 - . gene_id "MSTRG.111499"; transcript_id "MSTRG.111499.1"; exon_number "3"; scaffold_62 StringTie exon 385010 385473 1000 . . gene_id "MSTRG.111509"; transcript_id "MSTRG.111509.1"; exon_number "1"; scaffold_62 StringTie exon 786579 786778 1000 . . gene_id "MSTRG.111545"; transcript_id "MSTRG.111545.1"; exon_number "1"; scaffold_62 StringTie exon 889220 889456 1000 . . gene_id "MSTRG.111552"; transcript_id "MSTRG.111552.1"; exon_number "1"; scaffold_62 StringTie exon 1063338 1063642 1000 . . gene_id "MSTRG.111559"; transcript_id "MSTRG.111559.1"; exon_number "1"; scaffold_62 StringTie exon 1109357 1109953 1000 . . gene_id "MSTRG.111562"; transcript_id "MSTRG.111562.1"; exon_number "1"; scaffold_62 StringTie exon 1367987 1368312 1000 . . gene_id "MSTRG.111580"; transcript_id "MSTRG.111580.1"; exon_number "1"; scaffold_62 StringTie exon 1523097 1523337 1000 . . gene_id "MSTRG.111585"; transcript_id "MSTRG.111585.1"; exon_number "1"; scaffold_62 StringTie exon 1569213 1570368 1000 . . gene_id "MSTRG.111587"; transcript_id "MSTRG.111587.1"; exon_number "1"; scaffold_62 StringTie exon 1605055 1605496 1000 . . gene_id "MSTRG.111596"; transcript_id "MSTRG.111596.1"; exon_number "1"; scaffold_62 StringTie exon 1789736 1789975 1000 . . gene_id "MSTRG.111604"; transcript_id "MSTRG.111604.1"; exon_number "1"; scaffold_62 StringTie exon 1949837 1950039 1000 . . gene_id "MSTRG.111620"; transcript_id "MSTRG.111620.1"; exon_number "1"; scaffold_62 StringTie exon 2020730 2021014 1000 . . gene_id "MSTRG.111623"; transcript_id "MSTRG.111623.1"; exon_number "1"; scaffold_620 StringTie exon 83854 84098 1000 . . gene_id "MSTRG.111631"; transcript_id "MSTRG.111631.1"; exon_number "1"; scaffold_620 StringTie exon 85809 86418 1000 . . gene_id "MSTRG.111632"; transcript_id "MSTRG.111632.1"; exon_number "1"; scaffold_6201 StringTie exon 367 600 1000 . . gene_id "MSTRG.111683"; transcript_id "MSTRG.111683.1"; exon_number "1"; scaffold_6201 StringTie exon 10807 11540 1000 . . gene_id "MSTRG.111684"; transcript_id "MSTRG.111684.1"; exon_number "1"; scaffold_62022 StringTie exon 91 380 1000 + . gene_id "MSTRG.111690"; transcript_id "MSTRG.111690.1"; exon_number "1"; scaffold_62022 StringTie exon 654 892 1000 + . gene_id "MSTRG.111690"; transcript_id "MSTRG.111690.1"; exon_number "2"; scaffold_62022 StringTie exon 1160 1308 1000 + . gene_id "MSTRG.111690"; transcript_id "MSTRG.111690.1"; exon_number "3"; scaffold_62022 StringTie exon 1648 1708 1000 + . gene_id "MSTRG.111690"; transcript_id "MSTRG.111690.1"; exon_number "4"; scaffold_62046 StringTie exon 1752 2161 1000 . . gene_id "MSTRG.111699"; transcript_id "MSTRG.111699.1"; exon_number "1"; scaffold_62066 StringTie exon 522 927 1000 . . gene_id "MSTRG.111710"; transcript_id "MSTRG.111710.1"; exon_number "1"; scaffold_6207 StringTie exon 36630 36843 1000 + . gene_id "MSTRG.111717"; transcript_id "MSTRG.111717.1"; exon_number "1"; scaffold_62076 StringTie exon 1855 2392 1000 . . gene_id "MSTRG.111719"; transcript_id "MSTRG.111719.1"; exon_number "1"; scaffold_6208 StringTie exon 36814 37199 1000 . . gene_id "MSTRG.111725"; transcript_id "MSTRG.111725.1"; exon_number "1"; scaffold_621 StringTie exon 164495 164939 1000 . . gene_id "MSTRG.111736"; transcript_id "MSTRG.111736.1"; exon_number "1"; scaffold_621 StringTie exon 488902 489131 1000 . . gene_id "MSTRG.111748"; transcript_id "MSTRG.111748.1"; exon_number "1"; scaffold_622 StringTie exon 158482 158665 1000 + . gene_id "MSTRG.111806"; transcript_id "MSTRG.111806.1"; exon_number "1"; scaffold_622 StringTie exon 163506 163526 1000 + . gene_id "MSTRG.111806"; transcript_id "MSTRG.111806.1"; exon_number "2"; scaffold_622 StringTie exon 281154 281204 1000 + . gene_id "MSTRG.111811"; transcript_id "MSTRG.111811.1"; exon_number "1"; scaffold_622 StringTie exon 284652 284771 1000 + . gene_id "MSTRG.111811"; transcript_id "MSTRG.111811.1"; exon_number "2"; scaffold_622 StringTie exon 287645 287696 1000 + . gene_id "MSTRG.111811"; transcript_id "MSTRG.111811.1"; exon_number "3"; scaffold_62250 StringTie exon 592 824 1000 . . gene_id "MSTRG.111862"; transcript_id "MSTRG.111862.1"; exon_number "1"; scaffold_623 StringTie exon 136966 137194 1000 . . gene_id "MSTRG.111896"; transcript_id "MSTRG.111896.1"; exon_number "1"; scaffold_623 StringTie exon 165441 165674 1000 . . gene_id "MSTRG.111901"; transcript_id "MSTRG.111901.1"; exon_number "1"; scaffold_623 StringTie exon 208905 209156 1000 . . gene_id "MSTRG.111905"; transcript_id "MSTRG.111905.1"; exon_number "1"; scaffold_623 StringTie exon 239679 239790 1000 + . gene_id "MSTRG.111908"; transcript_id "MSTRG.111908.1"; exon_number "1"; scaffold_623 StringTie exon 239877 240095 1000 + . gene_id "MSTRG.111908"; transcript_id "MSTRG.111908.1"; exon_number "2"; scaffold_623 StringTie exon 356801 357273 1000 . . gene_id "MSTRG.111921"; transcript_id "MSTRG.111921.1"; exon_number "1"; scaffold_62390 StringTie exon 50 1019 1000 . . gene_id "MSTRG.111993"; transcript_id "MSTRG.111993.1"; exon_number "1"; scaffold_62407 StringTie exon 795 1297 1000 . . gene_id "MSTRG.112036"; transcript_id "MSTRG.112036.1"; exon_number "1"; scaffold_625 StringTie exon 3315 3517 1000 . . gene_id "MSTRG.112081"; transcript_id "MSTRG.112081.1"; exon_number "1"; scaffold_625 StringTie exon 114102 114325 1000 . . gene_id "MSTRG.112084"; transcript_id "MSTRG.112084.1"; exon_number "1"; scaffold_62545 StringTie exon 554 783 1000 . . gene_id "MSTRG.112115"; transcript_id "MSTRG.112115.1"; exon_number "1"; scaffold_62577 StringTie exon 1264 1490 1000 . . gene_id "MSTRG.112131"; transcript_id "MSTRG.112131.1"; exon_number "1"; scaffold_62588 StringTie exon 2011 2157 1000 + . gene_id "MSTRG.112133"; transcript_id "MSTRG.112133.1"; exon_number "1"; scaffold_62588 StringTie exon 2178 2239 1000 + . gene_id "MSTRG.112133"; transcript_id "MSTRG.112133.1"; exon_number "2"; scaffold_62588 StringTie exon 2294 2388 1000 + . gene_id "MSTRG.112133"; transcript_id "MSTRG.112133.1"; exon_number "3"; scaffold_62588 StringTie exon 2011 2253 1000 + . gene_id "MSTRG.112133"; transcript_id "MSTRG.112133.5"; exon_number "1"; scaffold_62588 StringTie exon 2336 2388 1000 + . gene_id "MSTRG.112133"; transcript_id "MSTRG.112133.5"; exon_number "2"; scaffold_62590 StringTie exon 1516 1815 1000 . . gene_id "MSTRG.112141"; transcript_id "MSTRG.112141.1"; exon_number "1"; scaffold_626 StringTie exon 337404 337667 1000 . . gene_id "MSTRG.112172"; transcript_id "MSTRG.112172.1"; exon_number "1"; scaffold_626 StringTie exon 373420 373655 1000 . . gene_id "MSTRG.112175"; transcript_id "MSTRG.112175.1"; exon_number "1"; scaffold_626 StringTie exon 548522 549108 1000 . . gene_id "MSTRG.112182"; transcript_id "MSTRG.112182.1"; exon_number "1"; scaffold_62604 StringTie exon 298 539 1000 . . gene_id "MSTRG.112193"; transcript_id "MSTRG.112193.1"; exon_number "1"; scaffold_62605 StringTie exon 83 352 1000 . . gene_id "MSTRG.112194"; transcript_id "MSTRG.112194.1"; exon_number "1"; scaffold_62620 StringTie exon 521 1916 1000 . . gene_id "MSTRG.112204"; transcript_id "MSTRG.112204.1"; exon_number "1"; scaffold_6264 StringTie exon 3750 3800 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "1"; scaffold_6264 StringTie exon 4970 5107 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "2"; scaffold_6264 StringTie exon 5359 5749 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "3"; scaffold_6264 StringTie exon 6204 6310 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "4"; scaffold_6264 StringTie exon 6584 6676 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "5"; scaffold_6264 StringTie exon 7096 7202 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "6"; scaffold_6264 StringTie exon 7392 7460 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "7"; scaffold_6264 StringTie exon 7588 7672 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "8"; scaffold_6264 StringTie exon 8350 8443 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "9"; scaffold_6264 StringTie exon 8664 9988 1000 + . gene_id "MSTRG.112218"; transcript_id "MSTRG.112218.1"; exon_number "10"; scaffold_6264 StringTie exon 13156 13366 1000 + . gene_id "MSTRG.112219"; transcript_id "MSTRG.112219.1"; exon_number "1"; scaffold_6264 StringTie exon 13496 13583 1000 + . gene_id "MSTRG.112219"; transcript_id "MSTRG.112219.1"; exon_number "2"; scaffold_6268 StringTie exon 12608 12698 1000 + . gene_id "MSTRG.112249"; transcript_id "MSTRG.112249.1"; exon_number "1"; scaffold_6268 StringTie exon 13273 13305 1000 + . gene_id "MSTRG.112249"; transcript_id "MSTRG.112249.1"; exon_number "2"; scaffold_6268 StringTie exon 13410 13547 1000 + . gene_id "MSTRG.112249"; transcript_id "MSTRG.112249.1"; exon_number "3"; scaffold_6268 StringTie exon 13647 13694 1000 + . gene_id "MSTRG.112249"; transcript_id "MSTRG.112249.1"; exon_number "4"; scaffold_627 StringTie exon 527568 527666 1000 - . gene_id "MSTRG.112308"; transcript_id "MSTRG.112308.2"; exon_number "1"; scaffold_627 StringTie exon 528466 528765 1000 - . gene_id "MSTRG.112308"; transcript_id "MSTRG.112308.2"; exon_number "2"; scaffold_627 StringTie exon 528941 529003 1000 - . gene_id "MSTRG.112308"; transcript_id "MSTRG.112308.2"; exon_number "3"; scaffold_627 StringTie exon 531739 531805 1000 - . gene_id "MSTRG.112308"; transcript_id "MSTRG.112308.2"; exon_number "4"; scaffold_62741 StringTie exon 852 1254 1000 . . gene_id "MSTRG.112339"; transcript_id "MSTRG.112339.1"; exon_number "1"; scaffold_62768 StringTie exon 988 1312 1000 . . gene_id "MSTRG.112348"; transcript_id "MSTRG.112348.1"; exon_number "1"; scaffold_628 StringTie exon 180974 181199 1000 . . gene_id "MSTRG.112374"; transcript_id "MSTRG.112374.1"; exon_number "1"; scaffold_628 StringTie exon 475378 475745 1000 . . gene_id "MSTRG.112387"; transcript_id "MSTRG.112387.1"; exon_number "1"; scaffold_628 StringTie exon 477241 477996 1000 - . gene_id "MSTRG.112389"; transcript_id "MSTRG.112389.1"; exon_number "1"; scaffold_628 StringTie exon 478129 478251 1000 - . gene_id "MSTRG.112389"; transcript_id "MSTRG.112389.1"; exon_number "2"; scaffold_628 StringTie exon 478545 478909 1000 - . gene_id "MSTRG.112389"; transcript_id "MSTRG.112389.1"; exon_number "3"; scaffold_628 StringTie exon 603723 603970 1000 . . gene_id "MSTRG.112403"; transcript_id "MSTRG.112403.1"; exon_number "1"; scaffold_6281 StringTie exon 330 635 1000 . . gene_id "MSTRG.112408"; transcript_id "MSTRG.112408.1"; exon_number "1"; scaffold_62842 StringTie exon 2012 2292 1000 . . gene_id "MSTRG.112422"; transcript_id "MSTRG.112422.1"; exon_number "1"; scaffold_6285 StringTie exon 16300 16506 1000 . . gene_id "MSTRG.112425"; transcript_id "MSTRG.112425.1"; exon_number "1"; scaffold_6289 StringTie exon 26004 26207 1000 . . gene_id "MSTRG.112443"; transcript_id "MSTRG.112443.1"; exon_number "1"; scaffold_629 StringTie exon 102744 102774 1000 - . gene_id "MSTRG.112454"; transcript_id "MSTRG.112454.5"; exon_number "1"; scaffold_629 StringTie exon 103353 103398 1000 - . gene_id "MSTRG.112454"; transcript_id "MSTRG.112454.5"; exon_number "2"; scaffold_629 StringTie exon 103882 103923 1000 - . gene_id "MSTRG.112454"; transcript_id "MSTRG.112454.5"; exon_number "3"; scaffold_629 StringTie exon 105763 105792 1000 - . gene_id "MSTRG.112454"; transcript_id "MSTRG.112454.5"; exon_number "4"; scaffold_629 StringTie exon 108570 108686 1000 - . gene_id "MSTRG.112454"; transcript_id "MSTRG.112454.5"; exon_number "5"; scaffold_629 StringTie exon 141784 141953 1000 - . gene_id "MSTRG.112454"; transcript_id "MSTRG.112454.5"; exon_number "6"; scaffold_629 StringTie exon 254040 254272 1000 . . gene_id "MSTRG.112476"; transcript_id "MSTRG.112476.1"; exon_number "1"; scaffold_62926 StringTie exon 74 1773 1000 + . gene_id "MSTRG.112529"; transcript_id "MSTRG.112529.1"; exon_number "1"; scaffold_62972 StringTie exon 316 969 1000 . . gene_id "MSTRG.112554"; transcript_id "MSTRG.112554.1"; exon_number "1"; scaffold_6298 StringTie exon 21892 22234 1000 . . gene_id "MSTRG.112559"; transcript_id "MSTRG.112559.1"; exon_number "1"; scaffold_63 StringTie exon 11602 12256 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "1"; scaffold_63 StringTie exon 12599 12728 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "2"; scaffold_63 StringTie exon 12958 13061 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "3"; scaffold_63 StringTie exon 13179 13253 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "4"; scaffold_63 StringTie exon 13406 13600 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "5"; scaffold_63 StringTie exon 13719 13796 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "6"; scaffold_63 StringTie exon 14087 14227 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "7"; scaffold_63 StringTie exon 14419 14598 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "8"; scaffold_63 StringTie exon 14724 14815 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "9"; scaffold_63 StringTie exon 14975 15095 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "10"; scaffold_63 StringTie exon 15212 15294 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "11"; scaffold_63 StringTie exon 15403 15466 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "12"; scaffold_63 StringTie exon 15566 15637 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "13"; scaffold_63 StringTie exon 15730 15817 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "14"; scaffold_63 StringTie exon 15974 16071 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "15"; scaffold_63 StringTie exon 16293 16453 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "16"; scaffold_63 StringTie exon 16558 16620 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "17"; scaffold_63 StringTie exon 17108 17168 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "18"; scaffold_63 StringTie exon 17487 17570 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "19"; scaffold_63 StringTie exon 18421 18494 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "20"; scaffold_63 StringTie exon 18927 18996 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "21"; scaffold_63 StringTie exon 19171 19329 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "22"; scaffold_63 StringTie exon 19445 19616 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "23"; scaffold_63 StringTie exon 23054 23087 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "24"; scaffold_63 StringTie exon 23338 23571 1000 - . gene_id "MSTRG.112571"; transcript_id "MSTRG.112571.1"; exon_number "25"; scaffold_63 StringTie exon 131769 133064 1000 . . gene_id "MSTRG.112577"; transcript_id "MSTRG.112577.1"; exon_number "1"; scaffold_63 StringTie exon 158588 158634 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "1"; scaffold_63 StringTie exon 166402 166490 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "2"; scaffold_63 StringTie exon 166833 166901 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "3"; scaffold_63 StringTie exon 167022 167078 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "4"; scaffold_63 StringTie exon 167728 167868 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "5"; scaffold_63 StringTie exon 172145 172288 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "6"; scaffold_63 StringTie exon 172392 172525 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "7"; scaffold_63 StringTie exon 177303 177379 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "8"; scaffold_63 StringTie exon 177465 177838 1000 + . gene_id "MSTRG.112580"; transcript_id "MSTRG.112580.1"; exon_number "9"; scaffold_63 StringTie exon 428664 428892 1000 . . gene_id "MSTRG.112593"; transcript_id "MSTRG.112593.1"; exon_number "1"; scaffold_63 StringTie exon 974580 974970 1000 . . gene_id "MSTRG.112626"; transcript_id "MSTRG.112626.1"; exon_number "1"; scaffold_63 StringTie exon 1150107 1150617 1000 . . gene_id "MSTRG.112635"; transcript_id "MSTRG.112635.1"; exon_number "1"; scaffold_63 StringTie exon 1421154 1421380 1000 . . gene_id "MSTRG.112649"; transcript_id "MSTRG.112649.1"; exon_number "1"; scaffold_63 StringTie exon 1431944 1432144 1000 . . gene_id "MSTRG.112650"; transcript_id "MSTRG.112650.1"; exon_number "1"; scaffold_63 StringTie exon 1537705 1538428 1000 . . gene_id "MSTRG.112657"; transcript_id "MSTRG.112657.1"; exon_number "1"; scaffold_63 StringTie exon 1576685 1577523 1000 . . gene_id "MSTRG.112664"; transcript_id "MSTRG.112664.1"; exon_number "1"; scaffold_63 StringTie exon 1627816 1628385 1000 - . gene_id "MSTRG.112671"; transcript_id "MSTRG.112671.1"; exon_number "1"; scaffold_63 StringTie exon 1628668 1628844 1000 - . gene_id "MSTRG.112671"; transcript_id "MSTRG.112671.1"; exon_number "2"; scaffold_63 StringTie exon 1629044 1629133 1000 - . gene_id "MSTRG.112671"; transcript_id "MSTRG.112671.1"; exon_number "3"; scaffold_63 StringTie exon 1629223 1629354 1000 - . gene_id "MSTRG.112671"; transcript_id "MSTRG.112671.1"; exon_number "4"; scaffold_63 StringTie exon 1629460 1629503 1000 - . gene_id "MSTRG.112671"; transcript_id "MSTRG.112671.1"; exon_number "5"; scaffold_63 StringTie exon 1630248 1630285 1000 - . gene_id "MSTRG.112671"; transcript_id "MSTRG.112671.1"; exon_number "6"; scaffold_63 StringTie exon 1631521 1631656 1000 - . gene_id "MSTRG.112671"; transcript_id "MSTRG.112671.1"; exon_number "7"; scaffold_63 StringTie exon 1688827 1689116 1000 . . gene_id "MSTRG.112676"; transcript_id "MSTRG.112676.1"; exon_number "1"; scaffold_630 StringTie exon 11057 11212 1000 + . gene_id "MSTRG.112691"; transcript_id "MSTRG.112691.1"; exon_number "1"; scaffold_630 StringTie exon 11337 11483 1000 + . gene_id "MSTRG.112691"; transcript_id "MSTRG.112691.1"; exon_number "2"; scaffold_630 StringTie exon 11637 11744 1000 + . gene_id "MSTRG.112691"; transcript_id "MSTRG.112691.1"; exon_number "3"; scaffold_630 StringTie exon 15681 15694 1000 + . gene_id "MSTRG.112694"; transcript_id "MSTRG.112694.1"; exon_number "1"; scaffold_630 StringTie exon 16814 17521 1000 + . gene_id "MSTRG.112694"; transcript_id "MSTRG.112694.1"; exon_number "2"; scaffold_630 StringTie exon 18075 18218 1000 + . gene_id "MSTRG.112694"; transcript_id "MSTRG.112694.1"; exon_number "3"; scaffold_630 StringTie exon 18514 18652 1000 + . gene_id "MSTRG.112694"; transcript_id "MSTRG.112694.1"; exon_number "4"; scaffold_630 StringTie exon 18775 19097 1000 + . gene_id "MSTRG.112694"; transcript_id "MSTRG.112694.1"; exon_number "5"; scaffold_630 StringTie exon 20182 20264 1000 + . gene_id "MSTRG.112694"; transcript_id "MSTRG.112694.1"; exon_number "6"; scaffold_630 StringTie exon 20384 20402 1000 + . gene_id "MSTRG.112694"; transcript_id "MSTRG.112694.1"; exon_number "7"; scaffold_630 StringTie exon 31582 31812 1000 . . gene_id "MSTRG.112696"; transcript_id "MSTRG.112696.1"; exon_number "1"; scaffold_630 StringTie exon 460883 461108 1000 . . gene_id "MSTRG.112721"; transcript_id "MSTRG.112721.1"; exon_number "1"; scaffold_6304 StringTie exon 14009 14280 1000 . . gene_id "MSTRG.112746"; transcript_id "MSTRG.112746.1"; exon_number "1"; scaffold_63061 StringTie exon 358 627 1000 . . gene_id "MSTRG.112763"; transcript_id "MSTRG.112763.1"; exon_number "1"; scaffold_631 StringTie exon 27978 28503 1000 . . gene_id "MSTRG.112785"; transcript_id "MSTRG.112785.1"; exon_number "1"; scaffold_631 StringTie exon 122803 123005 1000 . . gene_id "MSTRG.112789"; transcript_id "MSTRG.112789.1"; exon_number "1"; scaffold_631 StringTie exon 140411 141544 1000 . . gene_id "MSTRG.112792"; transcript_id "MSTRG.112792.1"; exon_number "1"; scaffold_631 StringTie exon 154161 154472 1000 . . gene_id "MSTRG.112795"; transcript_id "MSTRG.112795.1"; exon_number "1"; scaffold_631 StringTie exon 183709 184094 1000 . . gene_id "MSTRG.112800"; transcript_id "MSTRG.112800.1"; exon_number "1"; scaffold_63148 StringTie exon 1678 1940 1000 . . gene_id "MSTRG.112847"; transcript_id "MSTRG.112847.1"; exon_number "1"; scaffold_63187 StringTie exon 856 1645 1000 . . gene_id "MSTRG.112868"; transcript_id "MSTRG.112868.1"; exon_number "1"; scaffold_63198 StringTie exon 261 585 1000 . . gene_id "MSTRG.112875"; transcript_id "MSTRG.112875.1"; exon_number "1"; scaffold_632 StringTie exon 207298 207832 1000 . . gene_id "MSTRG.112888"; transcript_id "MSTRG.112888.1"; exon_number "1"; scaffold_632 StringTie exon 406282 407095 1000 . . gene_id "MSTRG.112920"; transcript_id "MSTRG.112920.1"; exon_number "1"; scaffold_632 StringTie exon 488729 490592 1000 - . gene_id "MSTRG.112927"; transcript_id "MSTRG.112927.1"; exon_number "1"; scaffold_632 StringTie exon 493726 493755 1000 - . gene_id "MSTRG.112929"; transcript_id "MSTRG.112929.1"; exon_number "1"; scaffold_632 StringTie exon 493878 493999 1000 - . gene_id "MSTRG.112929"; transcript_id "MSTRG.112929.1"; exon_number "2"; scaffold_632 StringTie exon 494116 494547 1000 - . gene_id "MSTRG.112929"; transcript_id "MSTRG.112929.1"; exon_number "3"; scaffold_632 StringTie exon 496124 496265 1000 - . gene_id "MSTRG.112929"; transcript_id "MSTRG.112929.1"; exon_number "4"; scaffold_632 StringTie exon 496778 496863 1000 - . gene_id "MSTRG.112929"; transcript_id "MSTRG.112929.1"; exon_number "5"; scaffold_632 StringTie exon 511583 511902 1000 - . gene_id "MSTRG.112929"; transcript_id "MSTRG.112929.1"; exon_number "6"; scaffold_6326 StringTie exon 15258 15507 1000 . . gene_id "MSTRG.112976"; transcript_id "MSTRG.112976.1"; exon_number "1"; scaffold_633 StringTie exon 434712 435094 1000 + . gene_id "MSTRG.113036"; transcript_id "MSTRG.113036.1"; exon_number "1"; scaffold_633 StringTie exon 435277 435578 1000 + . gene_id "MSTRG.113036"; transcript_id "MSTRG.113036.1"; exon_number "2"; scaffold_63336 StringTie exon 1994 2368 1000 . . gene_id "MSTRG.113068"; transcript_id "MSTRG.113068.1"; exon_number "1"; scaffold_63341 StringTie exon 7 598 1000 . . gene_id "MSTRG.113072"; transcript_id "MSTRG.113072.1"; exon_number "1"; scaffold_6335 StringTie exon 27762 28474 1000 . . gene_id "MSTRG.113077"; transcript_id "MSTRG.113077.1"; exon_number "1"; scaffold_63365 StringTie exon 1427 1792 1000 . . gene_id "MSTRG.113086"; transcript_id "MSTRG.113086.1"; exon_number "1"; scaffold_63378 StringTie exon 1405 1667 1000 - . gene_id "MSTRG.113093"; transcript_id "MSTRG.113093.1"; exon_number "1"; scaffold_63378 StringTie exon 1704 1802 1000 - . gene_id "MSTRG.113093"; transcript_id "MSTRG.113093.1"; exon_number "2"; scaffold_634 StringTie exon 30102 30429 1000 . . gene_id "MSTRG.113103"; transcript_id "MSTRG.113103.1"; exon_number "1"; scaffold_634 StringTie exon 596717 596956 1000 . . gene_id "MSTRG.113130"; transcript_id "MSTRG.113130.1"; exon_number "1"; scaffold_6341 StringTie exon 6070 6535 1000 . . gene_id "MSTRG.113140"; transcript_id "MSTRG.113140.1"; exon_number "1"; scaffold_63411 StringTie exon 2080 2366 1000 . . gene_id "MSTRG.113143"; transcript_id "MSTRG.113143.1"; exon_number "1"; scaffold_63417 StringTie exon 1669 1887 1000 . . gene_id "MSTRG.113147"; transcript_id "MSTRG.113147.1"; exon_number "1"; scaffold_63455 StringTie exon 1744 1980 1000 . . gene_id "MSTRG.113171"; transcript_id "MSTRG.113171.1"; exon_number "1"; scaffold_63494 StringTie exon 4 212 1000 . . gene_id "MSTRG.113193"; transcript_id "MSTRG.113193.1"; exon_number "1"; scaffold_635 StringTie exon 246066 246285 1000 . . gene_id "MSTRG.113213"; transcript_id "MSTRG.113213.1"; exon_number "1"; scaffold_635 StringTie exon 437219 437734 1000 . . gene_id "MSTRG.113228"; transcript_id "MSTRG.113228.1"; exon_number "1"; scaffold_63505 StringTie exon 80 283 1000 . . gene_id "MSTRG.113242"; transcript_id "MSTRG.113242.1"; exon_number "1"; scaffold_63551 StringTie exon 469 2345 1000 . . gene_id "MSTRG.113261"; transcript_id "MSTRG.113261.1"; exon_number "1"; scaffold_63593 StringTie exon 2 224 1000 . . gene_id "MSTRG.113280"; transcript_id "MSTRG.113280.1"; exon_number "1"; scaffold_636 StringTie exon 7920 8211 1000 . . gene_id "MSTRG.113285"; transcript_id "MSTRG.113285.1"; exon_number "1"; scaffold_636 StringTie exon 372970 373248 1000 . . gene_id "MSTRG.113306"; transcript_id "MSTRG.113306.1"; exon_number "1"; scaffold_636 StringTie exon 395783 396658 1000 . . gene_id "MSTRG.113311"; transcript_id "MSTRG.113311.1"; exon_number "1"; scaffold_636 StringTie exon 407922 407998 1000 - . gene_id "MSTRG.113314"; transcript_id "MSTRG.113314.1"; exon_number "1"; scaffold_636 StringTie exon 412519 412965 1000 - . gene_id "MSTRG.113314"; transcript_id "MSTRG.113314.1"; exon_number "2"; scaffold_636 StringTie exon 592016 592240 1000 . . gene_id "MSTRG.113324"; transcript_id "MSTRG.113324.1"; exon_number "1"; scaffold_6361 StringTie exon 35466 35604 1000 - . gene_id "MSTRG.113336"; transcript_id "MSTRG.113336.1"; exon_number "1"; scaffold_6361 StringTie exon 36223 36375 1000 - . gene_id "MSTRG.113336"; transcript_id "MSTRG.113336.1"; exon_number "2"; scaffold_6361 StringTie exon 36558 36633 1000 - . gene_id "MSTRG.113336"; transcript_id "MSTRG.113336.1"; exon_number "3"; scaffold_63631 StringTie exon 2094 2350 1000 . . gene_id "MSTRG.113350"; transcript_id "MSTRG.113350.1"; exon_number "1"; scaffold_63641 StringTie exon 38 1378 1000 . . gene_id "MSTRG.113354"; transcript_id "MSTRG.113354.1"; exon_number "1"; scaffold_6369 StringTie exon 10830 11513 1000 . . gene_id "MSTRG.113377"; transcript_id "MSTRG.113377.1"; exon_number "1"; scaffold_637 StringTie exon 42288 42335 1000 + . gene_id "MSTRG.113389"; transcript_id "MSTRG.113389.1"; exon_number "1"; scaffold_637 StringTie exon 42493 42652 1000 + . gene_id "MSTRG.113389"; transcript_id "MSTRG.113389.1"; exon_number "2"; scaffold_637 StringTie exon 42837 42902 1000 + . gene_id "MSTRG.113389"; transcript_id "MSTRG.113389.1"; exon_number "3"; scaffold_637 StringTie exon 43021 43040 1000 + . gene_id "MSTRG.113389"; transcript_id "MSTRG.113389.1"; exon_number "4"; scaffold_637 StringTie exon 75923 75948 1000 - . gene_id "MSTRG.113393"; transcript_id "MSTRG.113393.1"; exon_number "1"; scaffold_637 StringTie exon 83549 83860 1000 - . gene_id "MSTRG.113393"; transcript_id "MSTRG.113393.1"; exon_number "2"; scaffold_637 StringTie exon 86057 86257 1000 . . gene_id "MSTRG.113394"; transcript_id "MSTRG.113394.1"; exon_number "1"; scaffold_637 StringTie exon 98943 99148 1000 . . gene_id "MSTRG.113398"; transcript_id "MSTRG.113398.1"; exon_number "1"; scaffold_637 StringTie exon 459401 459696 1000 . . gene_id "MSTRG.113429"; transcript_id "MSTRG.113429.1"; exon_number "1"; scaffold_637 StringTie exon 466403 466418 1000 - . gene_id "MSTRG.113430"; transcript_id "MSTRG.113430.1"; exon_number "1"; scaffold_637 StringTie exon 466609 466771 1000 - . gene_id "MSTRG.113430"; transcript_id "MSTRG.113430.1"; exon_number "2"; scaffold_637 StringTie exon 466864 466908 1000 - . gene_id "MSTRG.113430"; transcript_id "MSTRG.113430.1"; exon_number "3"; scaffold_637 StringTie exon 476540 476747 1000 . . gene_id "MSTRG.113432"; transcript_id "MSTRG.113432.1"; exon_number "1"; scaffold_63739 StringTie exon 78 313 1000 + . gene_id "MSTRG.113456"; transcript_id "MSTRG.113456.2"; exon_number "1"; scaffold_63752 StringTie exon 1726 2044 1000 . . gene_id "MSTRG.113465"; transcript_id "MSTRG.113465.1"; exon_number "1"; scaffold_6376 StringTie exon 4644 5031 1000 . . gene_id "MSTRG.113468"; transcript_id "MSTRG.113468.1"; exon_number "1"; scaffold_63785 StringTie exon 731 786 1000 - . gene_id "MSTRG.113483"; transcript_id "MSTRG.113483.1"; exon_number "1"; scaffold_63785 StringTie exon 1145 1220 1000 - . gene_id "MSTRG.113483"; transcript_id "MSTRG.113483.1"; exon_number "2"; scaffold_63785 StringTie exon 2145 2353 1000 - . gene_id "MSTRG.113483"; transcript_id "MSTRG.113483.1"; exon_number "3"; scaffold_638 StringTie exon 48181 48390 1000 - . gene_id "MSTRG.113489"; transcript_id "MSTRG.113489.1"; exon_number "1"; scaffold_638 StringTie exon 48634 48816 1000 - . gene_id "MSTRG.113489"; transcript_id "MSTRG.113489.1"; exon_number "2"; scaffold_638 StringTie exon 50552 50651 1000 - . gene_id "MSTRG.113489"; transcript_id "MSTRG.113489.1"; exon_number "3"; scaffold_638 StringTie exon 51780 51877 1000 - . gene_id "MSTRG.113489"; transcript_id "MSTRG.113489.1"; exon_number "4"; scaffold_638 StringTie exon 52539 53018 1000 - . gene_id "MSTRG.113489"; transcript_id "MSTRG.113489.1"; exon_number "5"; scaffold_6380 StringTie exon 30554 30798 1000 . . gene_id "MSTRG.113530"; transcript_id "MSTRG.113530.1"; exon_number "1"; scaffold_6381 StringTie exon 36478 36704 1000 . . gene_id "MSTRG.113535"; transcript_id "MSTRG.113535.1"; exon_number "1"; scaffold_639 StringTie exon 44969 45205 1000 . . gene_id "MSTRG.113581"; transcript_id "MSTRG.113581.1"; exon_number "1"; scaffold_639 StringTie exon 117516 117856 1000 + . gene_id "MSTRG.113587"; transcript_id "MSTRG.113587.1"; exon_number "1"; scaffold_639 StringTie exon 118120 118197 1000 + . gene_id "MSTRG.113587"; transcript_id "MSTRG.113587.1"; exon_number "2"; scaffold_639 StringTie exon 179187 179417 1000 . . gene_id "MSTRG.113594"; transcript_id "MSTRG.113594.1"; exon_number "1"; scaffold_639 StringTie exon 252140 252369 1000 . . gene_id "MSTRG.113602"; transcript_id "MSTRG.113602.1"; exon_number "1"; scaffold_639 StringTie exon 476850 476863 1000 - . gene_id "MSTRG.113623"; transcript_id "MSTRG.113623.1"; exon_number "1"; scaffold_639 StringTie exon 477862 477958 1000 - . gene_id "MSTRG.113623"; transcript_id "MSTRG.113623.1"; exon_number "2"; scaffold_639 StringTie exon 480933 481040 1000 - . gene_id "MSTRG.113623"; transcript_id "MSTRG.113623.1"; exon_number "3"; scaffold_63927 StringTie exon 778 1412 1000 . . gene_id "MSTRG.113642"; transcript_id "MSTRG.113642.1"; exon_number "1"; scaffold_6397 StringTie exon 25068 25340 1000 . . gene_id "MSTRG.113668"; transcript_id "MSTRG.113668.1"; exon_number "1"; scaffold_64 StringTie exon 17789 18242 1000 . . gene_id "MSTRG.113688"; transcript_id "MSTRG.113688.1"; exon_number "1"; scaffold_64 StringTie exon 42025 42293 1000 . . gene_id "MSTRG.113690"; transcript_id "MSTRG.113690.1"; exon_number "1"; scaffold_64 StringTie exon 56261 56801 1000 . . gene_id "MSTRG.113691"; transcript_id "MSTRG.113691.1"; exon_number "1"; scaffold_64 StringTie exon 96565 96656 1000 + . gene_id "MSTRG.113693"; transcript_id "MSTRG.113693.1"; exon_number "1"; scaffold_64 StringTie exon 96821 96915 1000 + . gene_id "MSTRG.113693"; transcript_id "MSTRG.113693.1"; exon_number "2"; scaffold_64 StringTie exon 99876 99903 1000 + . gene_id "MSTRG.113693"; transcript_id "MSTRG.113693.1"; exon_number "3"; scaffold_64 StringTie exon 142464 142711 1000 . . gene_id "MSTRG.113698"; transcript_id "MSTRG.113698.1"; exon_number "1"; scaffold_64 StringTie exon 195182 195198 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "1"; scaffold_64 StringTie exon 195310 195380 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "2"; scaffold_64 StringTie exon 195470 195603 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "3"; scaffold_64 StringTie exon 201587 201725 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "4"; scaffold_64 StringTie exon 203190 203309 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "5"; scaffold_64 StringTie exon 203623 203725 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "6"; scaffold_64 StringTie exon 203884 204006 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "7"; scaffold_64 StringTie exon 205520 205638 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "8"; scaffold_64 StringTie exon 205820 205876 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "9"; scaffold_64 StringTie exon 205999 206108 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "10"; scaffold_64 StringTie exon 207802 207936 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "11"; scaffold_64 StringTie exon 208851 209022 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "12"; scaffold_64 StringTie exon 209157 209243 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "13"; scaffold_64 StringTie exon 209745 209885 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "14"; scaffold_64 StringTie exon 211838 211906 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "15"; scaffold_64 StringTie exon 213897 214092 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "16"; scaffold_64 StringTie exon 214358 214472 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "17"; scaffold_64 StringTie exon 214641 214786 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "18"; scaffold_64 StringTie exon 215441 216519 1000 + . gene_id "MSTRG.113702"; transcript_id "MSTRG.113702.1"; exon_number "19"; scaffold_64 StringTie exon 282865 283372 1000 . . gene_id "MSTRG.113707"; transcript_id "MSTRG.113707.1"; exon_number "1"; scaffold_64 StringTie exon 552912 553019 1000 + . gene_id "MSTRG.113729"; transcript_id "MSTRG.113729.1"; exon_number "1"; scaffold_64 StringTie exon 553512 553652 1000 + . gene_id "MSTRG.113729"; transcript_id "MSTRG.113729.1"; exon_number "2"; scaffold_64 StringTie exon 553883 553898 1000 + . gene_id "MSTRG.113729"; transcript_id "MSTRG.113729.1"; exon_number "3"; scaffold_64 StringTie exon 874338 874489 1000 - . gene_id "MSTRG.113760"; transcript_id "MSTRG.113760.1"; exon_number "1"; scaffold_64 StringTie exon 876627 876853 1000 - . gene_id "MSTRG.113760"; transcript_id "MSTRG.113760.1"; exon_number "2"; scaffold_64 StringTie exon 877012 877052 1000 - . gene_id "MSTRG.113760"; transcript_id "MSTRG.113760.1"; exon_number "3"; scaffold_64 StringTie exon 877247 877314 1000 - . gene_id "MSTRG.113760"; transcript_id "MSTRG.113760.1"; exon_number "4"; scaffold_64 StringTie exon 878964 879111 1000 - . gene_id "MSTRG.113760"; transcript_id "MSTRG.113760.1"; exon_number "5"; scaffold_64 StringTie exon 879315 879387 1000 - . gene_id "MSTRG.113760"; transcript_id "MSTRG.113760.1"; exon_number "6"; scaffold_64 StringTie exon 884295 884313 1000 - . gene_id "MSTRG.113760"; transcript_id "MSTRG.113760.1"; exon_number "7"; scaffold_64 StringTie exon 1083034 1083275 1000 . . gene_id "MSTRG.113785"; transcript_id "MSTRG.113785.1"; exon_number "1"; scaffold_64 StringTie exon 1113529 1113685 1000 + . gene_id "MSTRG.113789"; transcript_id "MSTRG.113789.2"; exon_number "1"; scaffold_64 StringTie exon 1117274 1117398 1000 + . gene_id "MSTRG.113789"; transcript_id "MSTRG.113789.2"; exon_number "2"; scaffold_64 StringTie exon 1118332 1118387 1000 + . gene_id "MSTRG.113789"; transcript_id "MSTRG.113789.2"; exon_number "3"; scaffold_64 StringTie exon 1170547 1171204 1000 . . gene_id "MSTRG.113793"; transcript_id "MSTRG.113793.1"; exon_number "1"; scaffold_64 StringTie exon 1187693 1187841 1000 + . gene_id "MSTRG.113796"; transcript_id "MSTRG.113796.2"; exon_number "1"; scaffold_64 StringTie exon 1188004 1188071 1000 + . gene_id "MSTRG.113796"; transcript_id "MSTRG.113796.2"; exon_number "2"; scaffold_64 StringTie exon 1188501 1188701 1000 . . gene_id "MSTRG.113797"; transcript_id "MSTRG.113797.1"; exon_number "1"; scaffold_64 StringTie exon 1295264 1296168 1000 . . gene_id "MSTRG.113807"; transcript_id "MSTRG.113807.1"; exon_number "1"; scaffold_64 StringTie exon 1297270 1297540 1000 . . gene_id "MSTRG.113809"; transcript_id "MSTRG.113809.1"; exon_number "1"; scaffold_64 StringTie exon 1359545 1359829 1000 . . gene_id "MSTRG.113816"; transcript_id "MSTRG.113816.1"; exon_number "1"; scaffold_64 StringTie exon 1425514 1426056 1000 . . gene_id "MSTRG.113823"; transcript_id "MSTRG.113823.1"; exon_number "1"; scaffold_64 StringTie exon 1607237 1607303 1000 + . gene_id "MSTRG.113837"; transcript_id "MSTRG.113837.1"; exon_number "1"; scaffold_64 StringTie exon 1607390 1607539 1000 + . gene_id "MSTRG.113837"; transcript_id "MSTRG.113837.1"; exon_number "2"; scaffold_64 StringTie exon 1610077 1610217 1000 + . gene_id "MSTRG.113837"; transcript_id "MSTRG.113837.1"; exon_number "3"; scaffold_64 StringTie exon 1610346 1610433 1000 + . gene_id "MSTRG.113837"; transcript_id "MSTRG.113837.1"; exon_number "4"; scaffold_64 StringTie exon 1610674 1610813 1000 + . gene_id "MSTRG.113837"; transcript_id "MSTRG.113837.1"; exon_number "5"; scaffold_64 StringTie exon 1611807 1611902 1000 + . gene_id "MSTRG.113837"; transcript_id "MSTRG.113837.1"; exon_number "6"; scaffold_64 StringTie exon 1735323 1735573 1000 . . gene_id "MSTRG.113847"; transcript_id "MSTRG.113847.1"; exon_number "1"; scaffold_64 StringTie exon 1954854 1955247 1000 . . gene_id "MSTRG.113856"; transcript_id "MSTRG.113856.1"; exon_number "1"; scaffold_640 StringTie exon 98886 99096 1000 . . gene_id "MSTRG.113875"; transcript_id "MSTRG.113875.1"; exon_number "1"; scaffold_640 StringTie exon 423688 424108 1000 . . gene_id "MSTRG.113897"; transcript_id "MSTRG.113897.1"; exon_number "1"; scaffold_64018 StringTie exon 53 533 1000 . . gene_id "MSTRG.113907"; transcript_id "MSTRG.113907.1"; exon_number "1"; scaffold_6402 StringTie exon 21613 21970 1000 . . gene_id "MSTRG.113908"; transcript_id "MSTRG.113908.1"; exon_number "1"; scaffold_6405 StringTie exon 1404 1707 1000 . . gene_id "MSTRG.113923"; transcript_id "MSTRG.113923.1"; exon_number "1"; scaffold_641 StringTie exon 45138 45312 1000 - . gene_id "MSTRG.113956"; transcript_id "MSTRG.113956.1"; exon_number "1"; scaffold_641 StringTie exon 47894 47945 1000 - . gene_id "MSTRG.113956"; transcript_id "MSTRG.113956.1"; exon_number "2"; scaffold_641 StringTie exon 48316 48351 1000 - . gene_id "MSTRG.113956"; transcript_id "MSTRG.113956.1"; exon_number "3"; scaffold_641 StringTie exon 48527 48574 1000 - . gene_id "MSTRG.113956"; transcript_id "MSTRG.113956.1"; exon_number "4"; scaffold_641 StringTie exon 50455 50491 1000 - . gene_id "MSTRG.113956"; transcript_id "MSTRG.113956.1"; exon_number "5"; scaffold_641 StringTie exon 336112 337381 1000 . . gene_id "MSTRG.113972"; transcript_id "MSTRG.113972.1"; exon_number "1"; scaffold_641 StringTie exon 396934 397048 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "1"; scaffold_641 StringTie exon 397272 397328 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "2"; scaffold_641 StringTie exon 397442 397582 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "3"; scaffold_641 StringTie exon 397737 397841 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "4"; scaffold_641 StringTie exon 398415 398479 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "5"; scaffold_641 StringTie exon 400158 400237 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "6"; scaffold_641 StringTie exon 400850 400938 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "7"; scaffold_641 StringTie exon 401417 401452 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "8"; scaffold_641 StringTie exon 403211 403286 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "9"; scaffold_641 StringTie exon 405619 405762 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "10"; scaffold_641 StringTie exon 405893 405969 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "11"; scaffold_641 StringTie exon 406742 407069 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "12"; scaffold_641 StringTie exon 407465 407637 1000 - . gene_id "MSTRG.113975"; transcript_id "MSTRG.113975.1"; exon_number "13"; scaffold_641 StringTie exon 560500 560738 1000 . . gene_id "MSTRG.113998"; transcript_id "MSTRG.113998.1"; exon_number "1"; scaffold_64121 StringTie exon 1969 2248 1000 . . gene_id "MSTRG.114014"; transcript_id "MSTRG.114014.1"; exon_number "1"; scaffold_642 StringTie exon 14537 14753 1000 . . gene_id "MSTRG.114062"; transcript_id "MSTRG.114062.1"; exon_number "1"; scaffold_642 StringTie exon 375446 375646 1000 . . gene_id "MSTRG.114073"; transcript_id "MSTRG.114073.1"; exon_number "1"; scaffold_642 StringTie exon 378846 379221 1000 . . gene_id "MSTRG.114074"; transcript_id "MSTRG.114074.1"; exon_number "1"; scaffold_642 StringTie exon 388451 388682 1000 . . gene_id "MSTRG.114075"; transcript_id "MSTRG.114075.1"; exon_number "1"; scaffold_642 StringTie exon 447076 447319 1000 . . gene_id "MSTRG.114080"; transcript_id "MSTRG.114080.1"; exon_number "1"; scaffold_6426 StringTie exon 9244 9513 1000 . . gene_id "MSTRG.114126"; transcript_id "MSTRG.114126.1"; exon_number "1"; scaffold_64280 StringTie exon 1618 1865 1000 . . gene_id "MSTRG.114138"; transcript_id "MSTRG.114138.1"; exon_number "1"; scaffold_643 StringTie exon 280732 281019 1000 . . gene_id "MSTRG.114161"; transcript_id "MSTRG.114161.1"; exon_number "1"; scaffold_643 StringTie exon 580237 580835 1000 . . gene_id "MSTRG.114204"; transcript_id "MSTRG.114204.1"; exon_number "1"; scaffold_6433 StringTie exon 19216 19426 1000 . . gene_id "MSTRG.114228"; transcript_id "MSTRG.114228.1"; exon_number "1"; scaffold_6438 StringTie exon 30281 30494 1000 . . gene_id "MSTRG.114259"; transcript_id "MSTRG.114259.1"; exon_number "1"; scaffold_644 StringTie exon 71108 71278 1000 - . gene_id "MSTRG.114272"; transcript_id "MSTRG.114272.1"; exon_number "1"; scaffold_644 StringTie exon 71401 71748 1000 - . gene_id "MSTRG.114272"; transcript_id "MSTRG.114272.1"; exon_number "2"; scaffold_644 StringTie exon 103408 103671 1000 - . gene_id "MSTRG.114278"; transcript_id "MSTRG.114278.1"; exon_number "1"; scaffold_644 StringTie exon 104188 104352 1000 - . gene_id "MSTRG.114278"; transcript_id "MSTRG.114278.1"; exon_number "2"; scaffold_644 StringTie exon 152447 153271 1000 . . gene_id "MSTRG.114281"; transcript_id "MSTRG.114281.1"; exon_number "1"; scaffold_644 StringTie exon 188842 188898 1000 + . gene_id "MSTRG.114285"; transcript_id "MSTRG.114285.1"; exon_number "1"; scaffold_644 StringTie exon 189635 189677 1000 + . gene_id "MSTRG.114285"; transcript_id "MSTRG.114285.1"; exon_number "2"; scaffold_644 StringTie exon 190220 190327 1000 + . gene_id "MSTRG.114285"; transcript_id "MSTRG.114285.1"; exon_number "3"; scaffold_644 StringTie exon 190477 190726 1000 + . gene_id "MSTRG.114285"; transcript_id "MSTRG.114285.1"; exon_number "4"; scaffold_644 StringTie exon 190977 191032 1000 + . gene_id "MSTRG.114285"; transcript_id "MSTRG.114285.1"; exon_number "5"; scaffold_644 StringTie exon 308121 308474 1000 . . gene_id "MSTRG.114297"; transcript_id "MSTRG.114297.1"; exon_number "1"; scaffold_644 StringTie exon 369641 369881 1000 . . gene_id "MSTRG.114305"; transcript_id "MSTRG.114305.1"; exon_number "1"; scaffold_6448 StringTie exon 8753 9896 1000 . . gene_id "MSTRG.114357"; transcript_id "MSTRG.114357.1"; exon_number "1"; scaffold_64497 StringTie exon 804 1011 1000 . . gene_id "MSTRG.114367"; transcript_id "MSTRG.114367.1"; exon_number "1"; scaffold_645 StringTie exon 531083 531478 1000 . . gene_id "MSTRG.114400"; transcript_id "MSTRG.114400.1"; exon_number "1"; scaffold_64504 StringTie exon 776 1775 1000 . . gene_id "MSTRG.114409"; transcript_id "MSTRG.114409.1"; exon_number "1"; scaffold_6453 StringTie exon 26755 28078 1000 . . gene_id "MSTRG.114423"; transcript_id "MSTRG.114423.1"; exon_number "1"; scaffold_64537 StringTie exon 1547 1813 1000 - . gene_id "MSTRG.114425"; transcript_id "MSTRG.114425.1"; exon_number "1"; scaffold_6457 StringTie exon 31348 31648 1000 . . gene_id "MSTRG.114435"; transcript_id "MSTRG.114435.1"; exon_number "1"; scaffold_6458 StringTie exon 5261 5279 1000 + . gene_id "MSTRG.114441"; transcript_id "MSTRG.114441.1"; exon_number "1"; scaffold_6458 StringTie exon 5316 5693 1000 + . gene_id "MSTRG.114441"; transcript_id "MSTRG.114441.1"; exon_number "2"; scaffold_64587 StringTie exon 1240 1511 1000 . . gene_id "MSTRG.114444"; transcript_id "MSTRG.114444.1"; exon_number "1"; scaffold_646 StringTie exon 42190 42352 1000 + . gene_id "MSTRG.114455"; transcript_id "MSTRG.114455.1"; exon_number "1"; scaffold_646 StringTie exon 48503 48666 1000 + . gene_id "MSTRG.114455"; transcript_id "MSTRG.114455.1"; exon_number "2"; scaffold_646 StringTie exon 362505 363026 1000 . . gene_id "MSTRG.114476"; transcript_id "MSTRG.114476.1"; exon_number "1"; scaffold_6466 StringTie exon 6329 6690 1000 . . gene_id "MSTRG.114522"; transcript_id "MSTRG.114522.1"; exon_number "1"; scaffold_6467 StringTie exon 6850 7344 1000 . . gene_id "MSTRG.114530"; transcript_id "MSTRG.114530.1"; exon_number "1"; scaffold_64676 StringTie exon 1171 1517 1000 . . gene_id "MSTRG.114534"; transcript_id "MSTRG.114534.1"; exon_number "1"; scaffold_64679 StringTie exon 1154 1359 1000 . . gene_id "MSTRG.114535"; transcript_id "MSTRG.114535.1"; exon_number "1"; scaffold_64694 StringTie exon 2061 2263 1000 . . gene_id "MSTRG.114540"; transcript_id "MSTRG.114540.1"; exon_number "1"; scaffold_647 StringTie exon 223344 223374 1000 - . gene_id "MSTRG.114551"; transcript_id "MSTRG.114551.1"; exon_number "1"; scaffold_647 StringTie exon 224108 224223 1000 - . gene_id "MSTRG.114551"; transcript_id "MSTRG.114551.1"; exon_number "2"; scaffold_647 StringTie exon 225568 225652 1000 - . gene_id "MSTRG.114551"; transcript_id "MSTRG.114551.1"; exon_number "3"; scaffold_6476 StringTie exon 205 425 1000 . . gene_id "MSTRG.114607"; transcript_id "MSTRG.114607.1"; exon_number "1"; scaffold_648 StringTie exon 1 986 1000 . . gene_id "MSTRG.114628"; transcript_id "MSTRG.114628.1"; exon_number "1"; scaffold_648 StringTie exon 388519 388724 1000 . . gene_id "MSTRG.114646"; transcript_id "MSTRG.114646.1"; exon_number "1"; scaffold_648 StringTie exon 494979 495182 1000 . . gene_id "MSTRG.114652"; transcript_id "MSTRG.114652.1"; exon_number "1"; scaffold_64804 StringTie exon 548 814 1000 . . gene_id "MSTRG.114662"; transcript_id "MSTRG.114662.1"; exon_number "1"; scaffold_6484 StringTie exon 351 588 1000 . . gene_id "MSTRG.114676"; transcript_id "MSTRG.114676.1"; exon_number "1"; scaffold_649 StringTie exon 84004 84159 1000 + . gene_id "MSTRG.114734"; transcript_id "MSTRG.114734.1"; exon_number "1"; scaffold_649 StringTie exon 84557 84707 1000 + . gene_id "MSTRG.114734"; transcript_id "MSTRG.114734.1"; exon_number "2"; scaffold_64923 StringTie exon 1 248 1000 . . gene_id "MSTRG.114787"; transcript_id "MSTRG.114787.1"; exon_number "1"; scaffold_6497 StringTie exon 13521 13855 1000 . . gene_id "MSTRG.114814"; transcript_id "MSTRG.114814.1"; exon_number "1"; scaffold_65 StringTie exon 173686 173925 1000 . . gene_id "MSTRG.114834"; transcript_id "MSTRG.114834.1"; exon_number "1"; scaffold_65 StringTie exon 573288 573575 1000 . . gene_id "MSTRG.114850"; transcript_id "MSTRG.114850.1"; exon_number "1"; scaffold_65 StringTie exon 858911 859134 1000 - . gene_id "MSTRG.114865"; transcript_id "MSTRG.114865.1"; exon_number "1"; scaffold_65 StringTie exon 1048514 1048716 1000 . . gene_id "MSTRG.114870"; transcript_id "MSTRG.114870.1"; exon_number "1"; scaffold_65 StringTie exon 1282717 1282955 1000 . . gene_id "MSTRG.114884"; transcript_id "MSTRG.114884.1"; exon_number "1"; scaffold_65 StringTie exon 1367542 1367787 1000 . . gene_id "MSTRG.114886"; transcript_id "MSTRG.114886.1"; exon_number "1"; scaffold_65 StringTie exon 1463680 1463888 1000 . . gene_id "MSTRG.114889"; transcript_id "MSTRG.114889.1"; exon_number "1"; scaffold_65 StringTie exon 1610669 1610972 1000 + . gene_id "MSTRG.114896"; transcript_id "MSTRG.114896.1"; exon_number "1"; scaffold_65 StringTie exon 1614325 1614441 1000 + . gene_id "MSTRG.114896"; transcript_id "MSTRG.114896.1"; exon_number "2"; scaffold_65 StringTie exon 1614696 1614834 1000 + . gene_id "MSTRG.114896"; transcript_id "MSTRG.114896.1"; exon_number "3"; scaffold_65 StringTie exon 1708170 1708518 1000 . . gene_id "MSTRG.114900"; transcript_id "MSTRG.114900.1"; exon_number "1"; scaffold_65 StringTie exon 1902702 1903167 1000 + . gene_id "MSTRG.114905"; transcript_id "MSTRG.114905.1"; exon_number "1"; scaffold_65 StringTie exon 1949468 1949770 1000 . . gene_id "MSTRG.114909"; transcript_id "MSTRG.114909.1"; exon_number "1"; scaffold_650 StringTie exon 430035 430273 1000 . . gene_id "MSTRG.114944"; transcript_id "MSTRG.114944.1"; exon_number "1"; scaffold_650 StringTie exon 565363 565685 1000 . . gene_id "MSTRG.114964"; transcript_id "MSTRG.114964.1"; exon_number "1"; scaffold_65019 StringTie exon 1833 2059 1000 . . gene_id "MSTRG.114976"; transcript_id "MSTRG.114976.1"; exon_number "1"; scaffold_65022 StringTie exon 1282 1544 1000 . . gene_id "MSTRG.114982"; transcript_id "MSTRG.114982.1"; exon_number "1"; scaffold_65029 StringTie exon 182 422 1000 . . gene_id "MSTRG.114983"; transcript_id "MSTRG.114983.1"; exon_number "1"; scaffold_65038 StringTie exon 424 641 1000 . . gene_id "MSTRG.114986"; transcript_id "MSTRG.114986.1"; exon_number "1"; scaffold_65087 StringTie exon 1825 2161 1000 . . gene_id "MSTRG.115016"; transcript_id "MSTRG.115016.1"; exon_number "1"; scaffold_651 StringTie exon 31190 31452 1000 . . gene_id "MSTRG.115026"; transcript_id "MSTRG.115026.1"; exon_number "1"; scaffold_651 StringTie exon 214793 214995 1000 . . gene_id "MSTRG.115056"; transcript_id "MSTRG.115056.1"; exon_number "1"; scaffold_651 StringTie exon 272030 272100 1000 - . gene_id "MSTRG.115064"; transcript_id "MSTRG.115064.1"; exon_number "1"; scaffold_651 StringTie exon 272264 272392 1000 - . gene_id "MSTRG.115064"; transcript_id "MSTRG.115064.1"; exon_number "2"; scaffold_651 StringTie exon 272741 272765 1000 - . gene_id "MSTRG.115064"; transcript_id "MSTRG.115064.1"; exon_number "3"; scaffold_651 StringTie exon 350093 351668 1000 . . gene_id "MSTRG.115076"; transcript_id "MSTRG.115076.1"; exon_number "1"; scaffold_65142 StringTie exon 1268 1742 1000 . . gene_id "MSTRG.115113"; transcript_id "MSTRG.115113.1"; exon_number "1"; scaffold_6515 StringTie exon 1427 1706 1000 . . gene_id "MSTRG.115115"; transcript_id "MSTRG.115115.1"; exon_number "1"; scaffold_65152 StringTie exon 1154 1357 1000 - . gene_id "MSTRG.115119"; transcript_id "MSTRG.115119.1"; exon_number "1"; scaffold_65152 StringTie exon 1606 1821 1000 - . gene_id "MSTRG.115119"; transcript_id "MSTRG.115119.1"; exon_number "2"; scaffold_65194 StringTie exon 843 1081 1000 . . gene_id "MSTRG.115135"; transcript_id "MSTRG.115135.1"; exon_number "1"; scaffold_652 StringTie exon 73418 73795 1000 . . gene_id "MSTRG.115144"; transcript_id "MSTRG.115144.1"; exon_number "1"; scaffold_652 StringTie exon 350586 350924 1000 - . gene_id "MSTRG.115166"; transcript_id "MSTRG.115166.1"; exon_number "1"; scaffold_65202 StringTie exon 31 150 1000 - . gene_id "MSTRG.115192"; transcript_id "MSTRG.115192.2"; exon_number "1"; scaffold_65202 StringTie exon 190 347 1000 - . gene_id "MSTRG.115192"; transcript_id "MSTRG.115192.2"; exon_number "2"; scaffold_65239 StringTie exon 8 126 1000 + . gene_id "MSTRG.115206"; transcript_id "MSTRG.115206.1"; exon_number "1"; scaffold_65239 StringTie exon 315 437 1000 + . gene_id "MSTRG.115206"; transcript_id "MSTRG.115206.1"; exon_number "2"; scaffold_6527 StringTie exon 30776 31009 1000 . . gene_id "MSTRG.115228"; transcript_id "MSTRG.115228.1"; exon_number "1"; scaffold_65283 StringTie exon 78 401 1000 . . gene_id "MSTRG.115233"; transcript_id "MSTRG.115233.1"; exon_number "1"; scaffold_653 StringTie exon 47436 47741 1000 . . gene_id "MSTRG.115246"; transcript_id "MSTRG.115246.1"; exon_number "1"; scaffold_653 StringTie exon 56484 56554 1000 + . gene_id "MSTRG.115249"; transcript_id "MSTRG.115249.2"; exon_number "1"; scaffold_653 StringTie exon 56728 56860 1000 + . gene_id "MSTRG.115249"; transcript_id "MSTRG.115249.2"; exon_number "2"; scaffold_653 StringTie exon 178627 178967 1000 . . gene_id "MSTRG.115255"; transcript_id "MSTRG.115255.1"; exon_number "1"; scaffold_653 StringTie exon 205141 205409 1000 . . gene_id "MSTRG.115258"; transcript_id "MSTRG.115258.1"; exon_number "1"; scaffold_653 StringTie exon 262315 262517 1000 . . gene_id "MSTRG.115264"; transcript_id "MSTRG.115264.1"; exon_number "1"; scaffold_653 StringTie exon 288360 288649 1000 . . gene_id "MSTRG.115266"; transcript_id "MSTRG.115266.1"; exon_number "1"; scaffold_653 StringTie exon 436270 436604 1000 . . gene_id "MSTRG.115277"; transcript_id "MSTRG.115277.1"; exon_number "1"; scaffold_653 StringTie exon 522134 522358 1000 . . gene_id "MSTRG.115280"; transcript_id "MSTRG.115280.1"; exon_number "1"; scaffold_65319 StringTie exon 59 274 1000 . . gene_id "MSTRG.115293"; transcript_id "MSTRG.115293.1"; exon_number "1"; scaffold_6533 StringTie exon 18579 18904 1000 . . gene_id "MSTRG.115299"; transcript_id "MSTRG.115299.1"; exon_number "1"; scaffold_65335 StringTie exon 304 2183 1000 . . gene_id "MSTRG.115305"; transcript_id "MSTRG.115305.1"; exon_number "1"; scaffold_65342 StringTie exon 930 1172 1000 . . gene_id "MSTRG.115309"; transcript_id "MSTRG.115309.1"; exon_number "1"; scaffold_65354 StringTie exon 1 200 1000 . . gene_id "MSTRG.115317"; transcript_id "MSTRG.115317.1"; exon_number "1"; scaffold_654 StringTie exon 324177 324414 1000 . . gene_id "MSTRG.115352"; transcript_id "MSTRG.115352.1"; exon_number "1"; scaffold_654 StringTie exon 341964 342493 1000 + . gene_id "MSTRG.115353"; transcript_id "MSTRG.115353.1"; exon_number "1"; scaffold_654 StringTie exon 345488 345664 1000 + . gene_id "MSTRG.115353"; transcript_id "MSTRG.115353.1"; exon_number "2"; scaffold_654 StringTie exon 425475 425919 1000 . . gene_id "MSTRG.115364"; transcript_id "MSTRG.115364.1"; exon_number "1"; scaffold_6543 StringTie exon 11484 12195 1000 . . gene_id "MSTRG.115401"; transcript_id "MSTRG.115401.1"; exon_number "1"; scaffold_6544 StringTie exon 1223 1601 1000 . . gene_id "MSTRG.115410"; transcript_id "MSTRG.115410.1"; exon_number "1"; scaffold_6544 StringTie exon 3757 4126 1000 . . gene_id "MSTRG.115411"; transcript_id "MSTRG.115411.1"; exon_number "1"; scaffold_65487 StringTie exon 1241 1509 1000 . . gene_id "MSTRG.115435"; transcript_id "MSTRG.115435.1"; exon_number "1"; scaffold_6549 StringTie exon 33280 33591 1000 . . gene_id "MSTRG.115442"; transcript_id "MSTRG.115442.1"; exon_number "1"; scaffold_655 StringTie exon 546053 546198 1000 - . gene_id "MSTRG.115475"; transcript_id "MSTRG.115475.1"; exon_number "1"; scaffold_655 StringTie exon 546310 546432 1000 - . gene_id "MSTRG.115475"; transcript_id "MSTRG.115475.1"; exon_number "2"; scaffold_65508 StringTie exon 520 933 1000 - . gene_id "MSTRG.115485"; transcript_id "MSTRG.115485.1"; exon_number "1"; scaffold_65508 StringTie exon 1184 1418 1000 - . gene_id "MSTRG.115485"; transcript_id "MSTRG.115485.1"; exon_number "2"; scaffold_6555 StringTie exon 6788 7002 1000 . . gene_id "MSTRG.115511"; transcript_id "MSTRG.115511.1"; exon_number "1"; scaffold_65633 StringTie exon 494 839 1000 . . gene_id "MSTRG.115588"; transcript_id "MSTRG.115588.1"; exon_number "1"; scaffold_65635 StringTie exon 778 1161 1000 . . gene_id "MSTRG.115592"; transcript_id "MSTRG.115592.1"; exon_number "1"; scaffold_65663 StringTie exon 1817 2192 1000 . . gene_id "MSTRG.115604"; transcript_id "MSTRG.115604.1"; exon_number "1"; scaffold_65665 StringTie exon 2079 2304 1000 . . gene_id "MSTRG.115605"; transcript_id "MSTRG.115605.1"; exon_number "1"; scaffold_65675 StringTie exon 1929 2263 1000 . . gene_id "MSTRG.115613"; transcript_id "MSTRG.115613.1"; exon_number "1"; scaffold_657 StringTie exon 551779 551882 1000 - . gene_id "MSTRG.115674"; transcript_id "MSTRG.115674.1"; exon_number "1"; scaffold_657 StringTie exon 552399 552577 1000 - . gene_id "MSTRG.115674"; transcript_id "MSTRG.115674.1"; exon_number "2"; scaffold_657 StringTie exon 558290 558365 1000 - . gene_id "MSTRG.115674"; transcript_id "MSTRG.115674.1"; exon_number "3"; scaffold_657 StringTie exon 559715 559790 1000 - . gene_id "MSTRG.115674"; transcript_id "MSTRG.115674.1"; exon_number "4"; scaffold_657 StringTie exon 559976 560081 1000 - . gene_id "MSTRG.115674"; transcript_id "MSTRG.115674.1"; exon_number "5"; scaffold_657 StringTie exon 560400 560508 1000 - . gene_id "MSTRG.115674"; transcript_id "MSTRG.115674.1"; exon_number "6"; scaffold_65715 StringTie exon 624 705 1000 - . gene_id "MSTRG.115691"; transcript_id "MSTRG.115691.1"; exon_number "1"; scaffold_65715 StringTie exon 1176 1339 1000 - . gene_id "MSTRG.115691"; transcript_id "MSTRG.115691.1"; exon_number "2"; scaffold_65740 StringTie exon 2038 2262 1000 . . gene_id "MSTRG.115699"; transcript_id "MSTRG.115699.1"; exon_number "1"; scaffold_6576 StringTie exon 8057 8313 1000 . . gene_id "MSTRG.115710"; transcript_id "MSTRG.115710.1"; exon_number "1"; scaffold_658 StringTie exon 106030 107175 1000 - . gene_id "MSTRG.115736"; transcript_id "MSTRG.115736.1"; exon_number "1"; scaffold_658 StringTie exon 107377 107492 1000 - . gene_id "MSTRG.115736"; transcript_id "MSTRG.115736.1"; exon_number "2"; scaffold_658 StringTie exon 107817 107943 1000 - . gene_id "MSTRG.115736"; transcript_id "MSTRG.115736.1"; exon_number "3"; scaffold_658 StringTie exon 110559 110667 1000 - . gene_id "MSTRG.115736"; transcript_id "MSTRG.115736.1"; exon_number "4"; scaffold_658 StringTie exon 110926 110975 1000 - . gene_id "MSTRG.115736"; transcript_id "MSTRG.115736.1"; exon_number "5"; scaffold_658 StringTie exon 114974 115211 1000 - . gene_id "MSTRG.115736"; transcript_id "MSTRG.115736.1"; exon_number "6"; scaffold_6583 StringTie exon 22638 22853 1000 . . gene_id "MSTRG.115774"; transcript_id "MSTRG.115774.1"; exon_number "1"; scaffold_6584 StringTie exon 1001 1872 1000 - . gene_id "MSTRG.115783"; transcript_id "MSTRG.115783.1"; exon_number "1"; scaffold_6584 StringTie exon 2526 2616 1000 - . gene_id "MSTRG.115783"; transcript_id "MSTRG.115783.1"; exon_number "2"; scaffold_659 StringTie exon 72790 73019 1000 . . gene_id "MSTRG.115826"; transcript_id "MSTRG.115826.1"; exon_number "1"; scaffold_659 StringTie exon 77150 77418 1000 . . gene_id "MSTRG.115828"; transcript_id "MSTRG.115828.1"; exon_number "1"; scaffold_659 StringTie exon 353581 353802 1000 . . gene_id "MSTRG.115838"; transcript_id "MSTRG.115838.1"; exon_number "1"; scaffold_659 StringTie exon 384767 384789 1000 - . gene_id "MSTRG.115839"; transcript_id "MSTRG.115839.1"; exon_number "1"; scaffold_659 StringTie exon 386632 386793 1000 - . gene_id "MSTRG.115839"; transcript_id "MSTRG.115839.1"; exon_number "2"; scaffold_659 StringTie exon 395230 395371 1000 - . gene_id "MSTRG.115839"; transcript_id "MSTRG.115839.1"; exon_number "3"; scaffold_65903 StringTie exon 1321 1525 1000 . . gene_id "MSTRG.115860"; transcript_id "MSTRG.115860.1"; exon_number "1"; scaffold_65909 StringTie exon 1527 1764 1000 . . gene_id "MSTRG.115862"; transcript_id "MSTRG.115862.1"; exon_number "1"; scaffold_65975 StringTie exon 54 264 1000 + . gene_id "MSTRG.115897"; transcript_id "MSTRG.115897.1"; exon_number "1"; scaffold_65975 StringTie exon 636 971 1000 + . gene_id "MSTRG.115897"; transcript_id "MSTRG.115897.1"; exon_number "2"; scaffold_65975 StringTie exon 1890 2024 1000 + . gene_id "MSTRG.115897"; transcript_id "MSTRG.115897.1"; exon_number "3"; scaffold_66 StringTie exon 162533 162923 1000 . . gene_id "MSTRG.115914"; transcript_id "MSTRG.115914.1"; exon_number "1"; scaffold_66 StringTie exon 180558 180570 1000 - . gene_id "MSTRG.115918"; transcript_id "MSTRG.115918.1"; exon_number "1"; scaffold_66 StringTie exon 180673 180723 1000 - . gene_id "MSTRG.115918"; transcript_id "MSTRG.115918.1"; exon_number "2"; scaffold_66 StringTie exon 180871 180974 1000 - . gene_id "MSTRG.115918"; transcript_id "MSTRG.115918.1"; exon_number "3"; scaffold_66 StringTie exon 182866 182921 1000 - . gene_id "MSTRG.115918"; transcript_id "MSTRG.115918.1"; exon_number "4"; scaffold_66 StringTie exon 307152 307367 1000 . . gene_id "MSTRG.115928"; transcript_id "MSTRG.115928.1"; exon_number "1"; scaffold_66 StringTie exon 407593 407849 1000 . . gene_id "MSTRG.115938"; transcript_id "MSTRG.115938.1"; exon_number "1"; scaffold_66 StringTie exon 414139 415439 1000 + . gene_id "MSTRG.115939"; transcript_id "MSTRG.115939.1"; exon_number "1"; scaffold_66 StringTie exon 464557 465056 1000 . . gene_id "MSTRG.115945"; transcript_id "MSTRG.115945.1"; exon_number "1"; scaffold_66 StringTie exon 692669 693476 1000 . . gene_id "MSTRG.115968"; transcript_id "MSTRG.115968.1"; exon_number "1"; scaffold_66 StringTie exon 762329 763068 1000 - . gene_id "MSTRG.115980"; transcript_id "MSTRG.115980.1"; exon_number "1"; scaffold_66 StringTie exon 767464 767674 1000 - . gene_id "MSTRG.115980"; transcript_id "MSTRG.115980.1"; exon_number "2"; scaffold_66 StringTie exon 772560 773836 1000 - . gene_id "MSTRG.115980"; transcript_id "MSTRG.115980.1"; exon_number "3"; scaffold_66 StringTie exon 1015680 1015998 1000 . . gene_id "MSTRG.116001"; transcript_id "MSTRG.116001.1"; exon_number "1"; scaffold_66 StringTie exon 1181511 1183002 1000 - . gene_id "MSTRG.116009"; transcript_id "MSTRG.116009.1"; exon_number "1"; scaffold_6601 StringTie exon 29063 29619 1000 . . gene_id "MSTRG.116083"; transcript_id "MSTRG.116083.1"; exon_number "1"; scaffold_6603 StringTie exon 500 706 1000 - . gene_id "MSTRG.116089"; transcript_id "MSTRG.116089.1"; exon_number "1"; scaffold_6603 StringTie exon 788 1054 1000 - . gene_id "MSTRG.116089"; transcript_id "MSTRG.116089.1"; exon_number "2"; scaffold_6603 StringTie exon 1179 1270 1000 - . gene_id "MSTRG.116089"; transcript_id "MSTRG.116089.1"; exon_number "3"; scaffold_6603 StringTie exon 1394 1470 1000 - . gene_id "MSTRG.116089"; transcript_id "MSTRG.116089.1"; exon_number "4"; scaffold_6603 StringTie exon 2009 2093 1000 - . gene_id "MSTRG.116089"; transcript_id "MSTRG.116089.1"; exon_number "5"; scaffold_6603 StringTie exon 2658 2792 1000 + . gene_id "MSTRG.116090"; transcript_id "MSTRG.116090.1"; exon_number "1"; scaffold_6603 StringTie exon 3395 3517 1000 + . gene_id "MSTRG.116090"; transcript_id "MSTRG.116090.1"; exon_number "2"; scaffold_6603 StringTie exon 3817 3934 1000 + . gene_id "MSTRG.116090"; transcript_id "MSTRG.116090.1"; exon_number "3"; scaffold_6603 StringTie exon 4205 4271 1000 + . gene_id "MSTRG.116090"; transcript_id "MSTRG.116090.1"; exon_number "4"; scaffold_6603 StringTie exon 4556 4681 1000 + . gene_id "MSTRG.116090"; transcript_id "MSTRG.116090.1"; exon_number "5"; scaffold_6603 StringTie exon 5054 5276 1000 + . gene_id "MSTRG.116090"; transcript_id "MSTRG.116090.1"; exon_number "6"; scaffold_6603 StringTie exon 5010 5210 1000 - . gene_id "MSTRG.116091"; transcript_id "MSTRG.116091.1"; exon_number "1"; scaffold_6603 StringTie exon 8380 9171 1000 - . gene_id "MSTRG.116091"; transcript_id "MSTRG.116091.1"; exon_number "2"; scaffold_66066 StringTie exon 1762 1984 1000 . . gene_id "MSTRG.116113"; transcript_id "MSTRG.116113.1"; exon_number "1"; scaffold_661 StringTie exon 36621 36750 1000 - . gene_id "MSTRG.116142"; transcript_id "MSTRG.116142.1"; exon_number "1"; scaffold_661 StringTie exon 37450 37547 1000 - . gene_id "MSTRG.116142"; transcript_id "MSTRG.116142.1"; exon_number "2"; scaffold_661 StringTie exon 37778 37807 1000 - . gene_id "MSTRG.116142"; transcript_id "MSTRG.116142.1"; exon_number "3"; scaffold_661 StringTie exon 184880 185006 1000 - . gene_id "MSTRG.116165"; transcript_id "MSTRG.116165.1"; exon_number "1"; scaffold_661 StringTie exon 185872 185978 1000 - . gene_id "MSTRG.116165"; transcript_id "MSTRG.116165.1"; exon_number "2"; scaffold_661 StringTie exon 190647 190853 1000 - . gene_id "MSTRG.116165"; transcript_id "MSTRG.116165.1"; exon_number "3"; scaffold_661 StringTie exon 248709 248952 1000 . . gene_id "MSTRG.116169"; transcript_id "MSTRG.116169.1"; exon_number "1"; scaffold_66108 StringTie exon 1982 2198 1000 . . gene_id "MSTRG.116207"; transcript_id "MSTRG.116207.1"; exon_number "1"; scaffold_66117 StringTie exon 822 1024 1000 . . gene_id "MSTRG.116214"; transcript_id "MSTRG.116214.1"; exon_number "1"; scaffold_66126 StringTie exon 778 1007 1000 . . gene_id "MSTRG.116219"; transcript_id "MSTRG.116219.1"; exon_number "1"; scaffold_6614 StringTie exon 24750 25041 1000 . . gene_id "MSTRG.116229"; transcript_id "MSTRG.116229.1"; exon_number "1"; scaffold_6615 StringTie exon 1643 2016 1000 . . gene_id "MSTRG.116233"; transcript_id "MSTRG.116233.1"; exon_number "1"; scaffold_6616 StringTie exon 28003 28078 1000 + . gene_id "MSTRG.116245"; transcript_id "MSTRG.116245.1"; exon_number "1"; scaffold_6616 StringTie exon 28215 28337 1000 + . gene_id "MSTRG.116245"; transcript_id "MSTRG.116245.1"; exon_number "2"; scaffold_6616 StringTie exon 28562 29675 1000 + . gene_id "MSTRG.116245"; transcript_id "MSTRG.116245.1"; exon_number "3"; scaffold_662 StringTie exon 168657 168805 1000 + . gene_id "MSTRG.116289"; transcript_id "MSTRG.116289.1"; exon_number "1"; scaffold_662 StringTie exon 168985 169054 1000 + . gene_id "MSTRG.116289"; transcript_id "MSTRG.116289.1"; exon_number "2"; scaffold_662 StringTie exon 519481 522017 1000 . . gene_id "MSTRG.116338"; transcript_id "MSTRG.116338.1"; exon_number "1"; scaffold_66214 StringTie exon 1267 1597 1000 . . gene_id "MSTRG.116365"; transcript_id "MSTRG.116365.1"; exon_number "1"; scaffold_66239 StringTie exon 246 547 1000 + . gene_id "MSTRG.116375"; transcript_id "MSTRG.116375.1"; exon_number "1"; scaffold_66239 StringTie exon 653 1201 1000 + . gene_id "MSTRG.116375"; transcript_id "MSTRG.116375.1"; exon_number "2"; scaffold_663 StringTie exon 90113 90443 1000 . . gene_id "MSTRG.116416"; transcript_id "MSTRG.116416.1"; exon_number "1"; scaffold_663 StringTie exon 105871 106076 1000 . . gene_id "MSTRG.116420"; transcript_id "MSTRG.116420.1"; exon_number "1"; scaffold_663 StringTie exon 113870 114265 1000 . . gene_id "MSTRG.116422"; transcript_id "MSTRG.116422.1"; exon_number "1"; scaffold_663 StringTie exon 180169 180390 1000 . . gene_id "MSTRG.116427"; transcript_id "MSTRG.116427.1"; exon_number "1"; scaffold_663 StringTie exon 211558 213557 1000 - . gene_id "MSTRG.116430"; transcript_id "MSTRG.116430.1"; exon_number "1"; scaffold_663 StringTie exon 383079 383338 1000 . . gene_id "MSTRG.116444"; transcript_id "MSTRG.116444.1"; exon_number "1"; scaffold_6630 StringTie exon 24198 25191 1000 . . gene_id "MSTRG.116459"; transcript_id "MSTRG.116459.1"; exon_number "1"; scaffold_6633 StringTie exon 34315 34422 1000 + . gene_id "MSTRG.116470"; transcript_id "MSTRG.116470.1"; exon_number "1"; scaffold_6633 StringTie exon 34499 34687 1000 + . gene_id "MSTRG.116470"; transcript_id "MSTRG.116470.1"; exon_number "2"; scaffold_66355 StringTie exon 514 611 1000 - . gene_id "MSTRG.116486"; transcript_id "MSTRG.116486.1"; exon_number "1"; scaffold_66355 StringTie exon 1015 1186 1000 - . gene_id "MSTRG.116486"; transcript_id "MSTRG.116486.1"; exon_number "2"; scaffold_66355 StringTie exon 1393 1492 1000 - . gene_id "MSTRG.116486"; transcript_id "MSTRG.116486.1"; exon_number "3"; scaffold_664 StringTie exon 534782 535053 1000 + . gene_id "MSTRG.116529"; transcript_id "MSTRG.116529.1"; exon_number "1"; scaffold_664 StringTie exon 535254 535430 1000 + . gene_id "MSTRG.116529"; transcript_id "MSTRG.116529.1"; exon_number "2"; scaffold_664 StringTie exon 535538 535612 1000 + . gene_id "MSTRG.116529"; transcript_id "MSTRG.116529.1"; exon_number "3"; scaffold_664 StringTie exon 535812 535829 1000 + . gene_id "MSTRG.116529"; transcript_id "MSTRG.116529.1"; exon_number "4"; scaffold_6640 StringTie exon 17566 17624 1000 + . gene_id "MSTRG.116539"; transcript_id "MSTRG.116539.1"; exon_number "1"; scaffold_6640 StringTie exon 19542 20114 1000 + . gene_id "MSTRG.116539"; transcript_id "MSTRG.116539.1"; exon_number "2"; scaffold_6642 StringTie exon 12575 12748 1000 - . gene_id "MSTRG.116551"; transcript_id "MSTRG.116551.1"; exon_number "1"; scaffold_6642 StringTie exon 13180 13345 1000 - . gene_id "MSTRG.116551"; transcript_id "MSTRG.116551.1"; exon_number "2"; scaffold_66439 StringTie exon 9 307 1000 . . gene_id "MSTRG.116560"; transcript_id "MSTRG.116560.1"; exon_number "1"; scaffold_665 StringTie exon 33104 33342 1000 . . gene_id "MSTRG.116583"; transcript_id "MSTRG.116583.1"; exon_number "1"; scaffold_665 StringTie exon 384681 384930 1000 . . gene_id "MSTRG.116597"; transcript_id "MSTRG.116597.1"; exon_number "1"; scaffold_665 StringTie exon 441565 441791 1000 . . gene_id "MSTRG.116601"; transcript_id "MSTRG.116601.1"; exon_number "1"; scaffold_6651 StringTie exon 16116 16353 1000 . . gene_id "MSTRG.116614"; transcript_id "MSTRG.116614.1"; exon_number "1"; scaffold_6653 StringTie exon 4153 5674 1000 . . gene_id "MSTRG.116623"; transcript_id "MSTRG.116623.1"; exon_number "1"; scaffold_66555 StringTie exon 1305 1526 1000 . . gene_id "MSTRG.116636"; transcript_id "MSTRG.116636.1"; exon_number "1"; scaffold_66571 StringTie exon 385 466 1000 - . gene_id "MSTRG.116652"; transcript_id "MSTRG.116652.1"; exon_number "1"; scaffold_66571 StringTie exon 583 713 1000 - . gene_id "MSTRG.116652"; transcript_id "MSTRG.116652.1"; exon_number "2"; scaffold_666 StringTie exon 290455 290692 1000 . . gene_id "MSTRG.116674"; transcript_id "MSTRG.116674.1"; exon_number "1"; scaffold_66641 StringTie exon 1446 1507 1000 + . gene_id "MSTRG.116727"; transcript_id "MSTRG.116727.1"; exon_number "1"; scaffold_66641 StringTie exon 1955 2215 1000 + . gene_id "MSTRG.116727"; transcript_id "MSTRG.116727.1"; exon_number "2"; scaffold_66659 StringTie exon 6 462 1000 - . gene_id "MSTRG.116734"; transcript_id "MSTRG.116734.1"; exon_number "1"; scaffold_66659 StringTie exon 770 932 1000 - . gene_id "MSTRG.116734"; transcript_id "MSTRG.116734.1"; exon_number "2"; scaffold_6666 StringTie exon 1390 1709 1000 . . gene_id "MSTRG.116735"; transcript_id "MSTRG.116735.1"; exon_number "1"; scaffold_6668 StringTie exon 23524 23808 1000 . . gene_id "MSTRG.116755"; transcript_id "MSTRG.116755.1"; exon_number "1"; scaffold_6668 StringTie exon 27945 28155 1000 . . gene_id "MSTRG.116757"; transcript_id "MSTRG.116757.1"; exon_number "1"; scaffold_66682 StringTie exon 111 769 1000 . . gene_id "MSTRG.116760"; transcript_id "MSTRG.116760.1"; exon_number "1"; scaffold_667 StringTie exon 114126 114384 1000 . . gene_id "MSTRG.116776"; transcript_id "MSTRG.116776.1"; exon_number "1"; scaffold_6670 StringTie exon 4728 4932 1000 . . gene_id "MSTRG.116801"; transcript_id "MSTRG.116801.1"; exon_number "1"; scaffold_66715 StringTie exon 345 619 1000 . . gene_id "MSTRG.116812"; transcript_id "MSTRG.116812.1"; exon_number "1"; scaffold_66735 StringTie exon 957 1187 1000 . . gene_id "MSTRG.116824"; transcript_id "MSTRG.116824.1"; exon_number "1"; scaffold_6674 StringTie exon 898 967 1000 + . gene_id "MSTRG.116828"; transcript_id "MSTRG.116828.1"; exon_number "1"; scaffold_6674 StringTie exon 1153 1290 1000 + . gene_id "MSTRG.116828"; transcript_id "MSTRG.116828.1"; exon_number "2"; scaffold_6674 StringTie exon 1488 1512 1000 + . gene_id "MSTRG.116828"; transcript_id "MSTRG.116828.1"; exon_number "3"; scaffold_6677 StringTie exon 29493 29765 1000 . . gene_id "MSTRG.116847"; transcript_id "MSTRG.116847.1"; exon_number "1"; scaffold_668 StringTie exon 294275 294543 1000 . . gene_id "MSTRG.116866"; transcript_id "MSTRG.116866.1"; exon_number "1"; scaffold_66804 StringTie exon 34 662 1000 - . gene_id "MSTRG.116904"; transcript_id "MSTRG.116904.1"; exon_number "1"; scaffold_66804 StringTie exon 821 872 1000 - . gene_id "MSTRG.116904"; transcript_id "MSTRG.116904.1"; exon_number "2"; scaffold_66804 StringTie exon 1148 1924 1000 - . gene_id "MSTRG.116904"; transcript_id "MSTRG.116904.1"; exon_number "3"; scaffold_6686 StringTie exon 16161 16328 1000 + . gene_id "MSTRG.116922"; transcript_id "MSTRG.116922.1"; exon_number "1"; scaffold_6686 StringTie exon 16432 16532 1000 + . gene_id "MSTRG.116922"; transcript_id "MSTRG.116922.1"; exon_number "2"; scaffold_6686 StringTie exon 18313 18369 1000 + . gene_id "MSTRG.116922"; transcript_id "MSTRG.116922.1"; exon_number "3"; scaffold_66864 StringTie exon 569 838 1000 . . gene_id "MSTRG.116926"; transcript_id "MSTRG.116926.1"; exon_number "1"; scaffold_6688 StringTie exon 17958 18171 1000 . . gene_id "MSTRG.116935"; transcript_id "MSTRG.116935.1"; exon_number "1"; scaffold_6689 StringTie exon 6227 6487 1000 . . gene_id "MSTRG.116942"; transcript_id "MSTRG.116942.1"; exon_number "1"; scaffold_669 StringTie exon 121544 122000 1000 . . gene_id "MSTRG.116958"; transcript_id "MSTRG.116958.1"; exon_number "1"; scaffold_669 StringTie exon 287314 287426 1000 - . gene_id "MSTRG.116973"; transcript_id "MSTRG.116973.1"; exon_number "1"; scaffold_669 StringTie exon 287542 287717 1000 - . gene_id "MSTRG.116973"; transcript_id "MSTRG.116973.1"; exon_number "2"; scaffold_669 StringTie exon 287866 288094 1000 - . gene_id "MSTRG.116973"; transcript_id "MSTRG.116973.1"; exon_number "3"; scaffold_669 StringTie exon 290126 290550 1000 - . gene_id "MSTRG.116973"; transcript_id "MSTRG.116973.1"; exon_number "4"; scaffold_669 StringTie exon 347181 347389 1000 . . gene_id "MSTRG.116986"; transcript_id "MSTRG.116986.1"; exon_number "1"; scaffold_669 StringTie exon 373763 374050 1000 . . gene_id "MSTRG.116991"; transcript_id "MSTRG.116991.1"; exon_number "1"; scaffold_669 StringTie exon 431698 431926 1000 . . gene_id "MSTRG.116997"; transcript_id "MSTRG.116997.1"; exon_number "1"; scaffold_66914 StringTie exon 890 1202 1000 . . gene_id "MSTRG.117009"; transcript_id "MSTRG.117009.1"; exon_number "1"; scaffold_6693 StringTie exon 14097 14334 1000 . . gene_id "MSTRG.117016"; transcript_id "MSTRG.117016.1"; exon_number "1"; scaffold_66941 StringTie exon 1994 2214 1000 . . gene_id "MSTRG.117022"; transcript_id "MSTRG.117022.1"; exon_number "1"; scaffold_66959 StringTie exon 397 629 1000 . . gene_id "MSTRG.117034"; transcript_id "MSTRG.117034.1"; exon_number "1"; scaffold_67 StringTie exon 157596 157798 1000 . . gene_id "MSTRG.117078"; transcript_id "MSTRG.117078.1"; exon_number "1"; scaffold_67 StringTie exon 429062 429837 1000 . . gene_id "MSTRG.117097"; transcript_id "MSTRG.117097.1"; exon_number "1"; scaffold_67 StringTie exon 441758 441811 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "1"; scaffold_67 StringTie exon 443850 443949 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "2"; scaffold_67 StringTie exon 444080 444253 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "3"; scaffold_67 StringTie exon 450471 450572 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "4"; scaffold_67 StringTie exon 451068 451155 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "5"; scaffold_67 StringTie exon 451313 451541 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "6"; scaffold_67 StringTie exon 453002 453080 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "7"; scaffold_67 StringTie exon 453223 453453 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "8"; scaffold_67 StringTie exon 453714 453981 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "9"; scaffold_67 StringTie exon 463512 464090 1000 - . gene_id "MSTRG.117100"; transcript_id "MSTRG.117100.1"; exon_number "10"; scaffold_67 StringTie exon 587137 587504 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "1"; scaffold_67 StringTie exon 589237 589374 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "2"; scaffold_67 StringTie exon 589522 589686 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "3"; scaffold_67 StringTie exon 589823 589984 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "4"; scaffold_67 StringTie exon 590213 590374 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "5"; scaffold_67 StringTie exon 590554 590675 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "6"; scaffold_67 StringTie exon 590787 590898 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "7"; scaffold_67 StringTie exon 591431 591603 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "8"; scaffold_67 StringTie exon 591751 591832 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "9"; scaffold_67 StringTie exon 592989 593196 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "10"; scaffold_67 StringTie exon 593446 593723 1000 - . gene_id "MSTRG.117116"; transcript_id "MSTRG.117116.2"; exon_number "11"; scaffold_67 StringTie exon 632761 632997 1000 - . gene_id "MSTRG.117122"; transcript_id "MSTRG.117122.1"; exon_number "1"; scaffold_67 StringTie exon 634149 634183 1000 - . gene_id "MSTRG.117122"; transcript_id "MSTRG.117122.1"; exon_number "2"; scaffold_67 StringTie exon 741402 741647 1000 . . gene_id "MSTRG.117141"; transcript_id "MSTRG.117141.1"; exon_number "1"; scaffold_67 StringTie exon 807402 807485 1000 + . gene_id "MSTRG.117146"; transcript_id "MSTRG.117146.1"; exon_number "1"; scaffold_67 StringTie exon 807629 807777 1000 + . gene_id "MSTRG.117146"; transcript_id "MSTRG.117146.1"; exon_number "2"; scaffold_67 StringTie exon 808312 808480 1000 + . gene_id "MSTRG.117146"; transcript_id "MSTRG.117146.1"; exon_number "3"; scaffold_67 StringTie exon 808584 808748 1000 + . gene_id "MSTRG.117146"; transcript_id "MSTRG.117146.1"; exon_number "4"; scaffold_67 StringTie exon 808840 808920 1000 + . gene_id "MSTRG.117146"; transcript_id "MSTRG.117146.1"; exon_number "5"; scaffold_67 StringTie exon 809027 809161 1000 + . gene_id "MSTRG.117146"; transcript_id "MSTRG.117146.1"; exon_number "6"; scaffold_67 StringTie exon 809241 809324 1000 + . gene_id "MSTRG.117146"; transcript_id "MSTRG.117146.1"; exon_number "7"; scaffold_67 StringTie exon 969025 969034 1000 - . gene_id "MSTRG.117172"; transcript_id "MSTRG.117172.1"; exon_number "1"; scaffold_67 StringTie exon 969229 969464 1000 - . gene_id "MSTRG.117172"; transcript_id "MSTRG.117172.1"; exon_number "2"; scaffold_67 StringTie exon 969790 969836 1000 - . gene_id "MSTRG.117172"; transcript_id "MSTRG.117172.1"; exon_number "3"; scaffold_67 StringTie exon 1035342 1035525 1000 - . gene_id "MSTRG.117178"; transcript_id "MSTRG.117178.2"; exon_number "1"; scaffold_67 StringTie exon 1035697 1035760 1000 - . gene_id "MSTRG.117178"; transcript_id "MSTRG.117178.2"; exon_number "2"; scaffold_67 StringTie exon 1035941 1036036 1000 - . gene_id "MSTRG.117178"; transcript_id "MSTRG.117178.2"; exon_number "3"; scaffold_67 StringTie exon 1036617 1036720 1000 - . gene_id "MSTRG.117178"; transcript_id "MSTRG.117178.2"; exon_number "4"; scaffold_67 StringTie exon 1043764 1043777 1000 - . gene_id "MSTRG.117178"; transcript_id "MSTRG.117178.2"; exon_number "5"; scaffold_67 StringTie exon 1044368 1044491 1000 + . gene_id "MSTRG.117179"; transcript_id "MSTRG.117179.2"; exon_number "1"; scaffold_67 StringTie exon 1045807 1045853 1000 + . gene_id "MSTRG.117179"; transcript_id "MSTRG.117179.2"; exon_number "2"; scaffold_67 StringTie exon 1046359 1046469 1000 + . gene_id "MSTRG.117179"; transcript_id "MSTRG.117179.2"; exon_number "3"; scaffold_67 StringTie exon 1648083 1648593 1000 - . gene_id "MSTRG.117216"; transcript_id "MSTRG.117216.1"; exon_number "1"; scaffold_67 StringTie exon 1654232 1654423 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "1"; scaffold_67 StringTie exon 1654559 1654653 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "2"; scaffold_67 StringTie exon 1654747 1654840 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "3"; scaffold_67 StringTie exon 1656858 1657044 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "4"; scaffold_67 StringTie exon 1657309 1657412 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "5"; scaffold_67 StringTie exon 1657545 1657614 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "6"; scaffold_67 StringTie exon 1657745 1658090 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "7"; scaffold_67 StringTie exon 1658218 1658374 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "8"; scaffold_67 StringTie exon 1658472 1658578 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "9"; scaffold_67 StringTie exon 1658677 1658924 1000 - . gene_id "MSTRG.117218"; transcript_id "MSTRG.117218.1"; exon_number "10"; scaffold_67 StringTie exon 1805852 1806216 1000 . . gene_id "MSTRG.117233"; transcript_id "MSTRG.117233.1"; exon_number "1"; scaffold_670 StringTie exon 233391 233619 1000 . . gene_id "MSTRG.117252"; transcript_id "MSTRG.117252.1"; exon_number "1"; scaffold_670 StringTie exon 457794 457982 1000 + . gene_id "MSTRG.117269"; transcript_id "MSTRG.117269.1"; exon_number "1"; scaffold_670 StringTie exon 460439 460577 1000 + . gene_id "MSTRG.117269"; transcript_id "MSTRG.117269.1"; exon_number "2"; scaffold_670 StringTie exon 460950 461077 1000 + . gene_id "MSTRG.117269"; transcript_id "MSTRG.117269.1"; exon_number "3"; scaffold_670 StringTie exon 461917 461953 1000 + . gene_id "MSTRG.117269"; transcript_id "MSTRG.117269.1"; exon_number "4"; scaffold_67035 StringTie exon 28 384 1000 . . gene_id "MSTRG.117290"; transcript_id "MSTRG.117290.1"; exon_number "1"; scaffold_67059 StringTie exon 1322 1633 1000 . . gene_id "MSTRG.117295"; transcript_id "MSTRG.117295.1"; exon_number "1"; scaffold_6707 StringTie exon 8 221 1000 . . gene_id "MSTRG.117298"; transcript_id "MSTRG.117298.1"; exon_number "1"; scaffold_67072 StringTie exon 1529 1779 1000 . . gene_id "MSTRG.117299"; transcript_id "MSTRG.117299.1"; exon_number "1"; scaffold_671 StringTie exon 114464 114683 1000 . . gene_id "MSTRG.117320"; transcript_id "MSTRG.117320.1"; exon_number "1"; scaffold_671 StringTie exon 176855 178690 1000 . . gene_id "MSTRG.117327"; transcript_id "MSTRG.117327.1"; exon_number "1"; scaffold_671 StringTie exon 525655 525864 1000 . . gene_id "MSTRG.117350"; transcript_id "MSTRG.117350.1"; exon_number "1"; scaffold_6716 StringTie exon 26903 26992 1000 - . gene_id "MSTRG.117382"; transcript_id "MSTRG.117382.1"; exon_number "1"; scaffold_6716 StringTie exon 27477 27585 1000 - . gene_id "MSTRG.117382"; transcript_id "MSTRG.117382.1"; exon_number "2"; scaffold_6716 StringTie exon 27869 28009 1000 - . gene_id "MSTRG.117382"; transcript_id "MSTRG.117382.1"; exon_number "3"; scaffold_6718 StringTie exon 13112 13438 1000 . . gene_id "MSTRG.117393"; transcript_id "MSTRG.117393.1"; exon_number "1"; scaffold_67198 StringTie exon 394 661 1000 . . gene_id "MSTRG.117402"; transcript_id "MSTRG.117402.1"; exon_number "1"; scaffold_672 StringTie exon 203936 204214 1000 . . gene_id "MSTRG.117420"; transcript_id "MSTRG.117420.1"; exon_number "1"; scaffold_672 StringTie exon 344716 345008 1000 . . gene_id "MSTRG.117433"; transcript_id "MSTRG.117433.1"; exon_number "1"; scaffold_673 StringTie exon 121899 122228 1000 . . gene_id "MSTRG.117514"; transcript_id "MSTRG.117514.1"; exon_number "1"; scaffold_673 StringTie exon 177776 177979 1000 . . gene_id "MSTRG.117516"; transcript_id "MSTRG.117516.1"; exon_number "1"; scaffold_673 StringTie exon 316570 316793 1000 - . gene_id "MSTRG.117533"; transcript_id "MSTRG.117533.1"; exon_number "1"; scaffold_673 StringTie exon 321873 321963 1000 - . gene_id "MSTRG.117533"; transcript_id "MSTRG.117533.1"; exon_number "2"; scaffold_673 StringTie exon 326333 326439 1000 - . gene_id "MSTRG.117533"; transcript_id "MSTRG.117533.1"; exon_number "3"; scaffold_673 StringTie exon 503189 503574 1000 . . gene_id "MSTRG.117542"; transcript_id "MSTRG.117542.1"; exon_number "1"; scaffold_6731 StringTie exon 23925 24267 1000 . . gene_id "MSTRG.117551"; transcript_id "MSTRG.117551.1"; exon_number "1"; scaffold_6731 StringTie exon 25369 25657 1000 . . gene_id "MSTRG.117552"; transcript_id "MSTRG.117552.1"; exon_number "1"; scaffold_67321 StringTie exon 985 1282 1000 . . gene_id "MSTRG.117559"; transcript_id "MSTRG.117559.1"; exon_number "1"; scaffold_67345 StringTie exon 1914 2263 1000 . . gene_id "MSTRG.117567"; transcript_id "MSTRG.117567.1"; exon_number "1"; scaffold_6735 StringTie exon 18678 19370 1000 . . gene_id "MSTRG.117571"; transcript_id "MSTRG.117571.1"; exon_number "1"; scaffold_67429 StringTie exon 399 604 1000 . . gene_id "MSTRG.117641"; transcript_id "MSTRG.117641.1"; exon_number "1"; scaffold_6745 StringTie exon 1194 2026 1000 . . gene_id "MSTRG.117650"; transcript_id "MSTRG.117650.1"; exon_number "1"; scaffold_67458 StringTie exon 847 1134 1000 . . gene_id "MSTRG.117653"; transcript_id "MSTRG.117653.1"; exon_number "1"; scaffold_6749 StringTie exon 15059 18251 1000 . . gene_id "MSTRG.117670"; transcript_id "MSTRG.117670.1"; exon_number "1"; scaffold_67497 StringTie exon 92 299 1000 . . gene_id "MSTRG.117676"; transcript_id "MSTRG.117676.1"; exon_number "1"; scaffold_675 StringTie exon 58969 59350 1000 - . gene_id "MSTRG.117683"; transcript_id "MSTRG.117683.1"; exon_number "1"; scaffold_675 StringTie exon 68745 68813 1000 - . gene_id "MSTRG.117685"; transcript_id "MSTRG.117685.1"; exon_number "1"; scaffold_675 StringTie exon 70035 70176 1000 - . gene_id "MSTRG.117685"; transcript_id "MSTRG.117685.1"; exon_number "2"; scaffold_675 StringTie exon 70651 70684 1000 - . gene_id "MSTRG.117685"; transcript_id "MSTRG.117685.1"; exon_number "3"; scaffold_675 StringTie exon 240353 240580 1000 . . gene_id "MSTRG.117709"; transcript_id "MSTRG.117709.1"; exon_number "1"; scaffold_675 StringTie exon 423134 423238 1000 - . gene_id "MSTRG.117721"; transcript_id "MSTRG.117721.1"; exon_number "1"; scaffold_675 StringTie exon 423652 423846 1000 - . gene_id "MSTRG.117721"; transcript_id "MSTRG.117721.1"; exon_number "2"; scaffold_675 StringTie exon 424514 424631 1000 - . gene_id "MSTRG.117721"; transcript_id "MSTRG.117721.1"; exon_number "3"; scaffold_675 StringTie exon 424817 424963 1000 - . gene_id "MSTRG.117721"; transcript_id "MSTRG.117721.1"; exon_number "4"; scaffold_675 StringTie exon 425162 425398 1000 - . gene_id "MSTRG.117721"; transcript_id "MSTRG.117721.1"; exon_number "5"; scaffold_675 StringTie exon 502190 502357 1000 - . gene_id "MSTRG.117729"; transcript_id "MSTRG.117729.1"; exon_number "1"; scaffold_675 StringTie exon 502913 503047 1000 - . gene_id "MSTRG.117729"; transcript_id "MSTRG.117729.1"; exon_number "2"; scaffold_67515 StringTie exon 1134 1467 1000 . . gene_id "MSTRG.117742"; transcript_id "MSTRG.117742.1"; exon_number "1"; scaffold_67520 StringTie exon 29 279 1000 . . gene_id "MSTRG.117746"; transcript_id "MSTRG.117746.1"; exon_number "1"; scaffold_67530 StringTie exon 1 1352 1000 + . gene_id "MSTRG.117750"; transcript_id "MSTRG.117750.1"; exon_number "1"; scaffold_6757 StringTie exon 30580 30835 1000 . . gene_id "MSTRG.117769"; transcript_id "MSTRG.117769.1"; exon_number "1"; scaffold_6758 StringTie exon 8760 9033 1000 . . gene_id "MSTRG.117772"; transcript_id "MSTRG.117772.1"; exon_number "1"; scaffold_676 StringTie exon 471297 471527 1000 . . gene_id "MSTRG.117807"; transcript_id "MSTRG.117807.1"; exon_number "1"; scaffold_6762 StringTie exon 23193 23295 1000 - . gene_id "MSTRG.117832"; transcript_id "MSTRG.117832.2"; exon_number "1"; scaffold_6762 StringTie exon 23411 23533 1000 - . gene_id "MSTRG.117832"; transcript_id "MSTRG.117832.2"; exon_number "2"; scaffold_6765 StringTie exon 3292 3682 1000 + . gene_id "MSTRG.117844"; transcript_id "MSTRG.117844.1"; exon_number "1"; scaffold_6765 StringTie exon 23162 23304 1000 + . gene_id "MSTRG.117844"; transcript_id "MSTRG.117844.1"; exon_number "2"; scaffold_6765 StringTie exon 23862 23937 1000 + . gene_id "MSTRG.117844"; transcript_id "MSTRG.117844.1"; exon_number "3"; scaffold_6765 StringTie exon 25891 25993 1000 + . gene_id "MSTRG.117844"; transcript_id "MSTRG.117844.1"; exon_number "4"; scaffold_6765 StringTie exon 26276 26369 1000 + . gene_id "MSTRG.117844"; transcript_id "MSTRG.117844.1"; exon_number "5"; scaffold_6765 StringTie exon 26578 26684 1000 + . gene_id "MSTRG.117844"; transcript_id "MSTRG.117844.1"; exon_number "6"; scaffold_67666 StringTie exon 233 965 1000 . . gene_id "MSTRG.117849"; transcript_id "MSTRG.117849.1"; exon_number "1"; scaffold_6769 StringTie exon 33172 33573 1000 . . gene_id "MSTRG.117864"; transcript_id "MSTRG.117864.1"; exon_number "1"; scaffold_677 StringTie exon 73292 73554 1000 . . gene_id "MSTRG.117870"; transcript_id "MSTRG.117870.1"; exon_number "1"; scaffold_677 StringTie exon 310110 310379 1000 . . gene_id "MSTRG.117878"; transcript_id "MSTRG.117878.1"; exon_number "1"; scaffold_677 StringTie exon 533319 533581 1000 . . gene_id "MSTRG.117890"; transcript_id "MSTRG.117890.1"; exon_number "1"; scaffold_6774 StringTie exon 6244 6479 1000 . . gene_id "MSTRG.117913"; transcript_id "MSTRG.117913.1"; exon_number "1"; scaffold_678 StringTie exon 44402 44563 1000 + . gene_id "MSTRG.117944"; transcript_id "MSTRG.117944.1"; exon_number "1"; scaffold_678 StringTie exon 44791 44889 1000 + . gene_id "MSTRG.117944"; transcript_id "MSTRG.117944.1"; exon_number "2"; scaffold_678 StringTie exon 45146 45255 1000 + . gene_id "MSTRG.117944"; transcript_id "MSTRG.117944.1"; exon_number "3"; scaffold_678 StringTie exon 45377 45471 1000 + . gene_id "MSTRG.117944"; transcript_id "MSTRG.117944.1"; exon_number "4"; scaffold_678 StringTie exon 49350 49408 1000 + . gene_id "MSTRG.117944"; transcript_id "MSTRG.117944.1"; exon_number "5"; scaffold_67817 StringTie exon 1364 1847 1000 . . gene_id "MSTRG.117989"; transcript_id "MSTRG.117989.1"; exon_number "1"; scaffold_67872 StringTie exon 511 789 1000 . . gene_id "MSTRG.118016"; transcript_id "MSTRG.118016.1"; exon_number "1"; scaffold_679 StringTie exon 7247 7800 1000 . . gene_id "MSTRG.118028"; transcript_id "MSTRG.118028.1"; exon_number "1"; scaffold_679 StringTie exon 33607 33732 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "1"; scaffold_679 StringTie exon 33883 34153 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "2"; scaffold_679 StringTie exon 38726 38863 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "3"; scaffold_679 StringTie exon 39090 39243 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "4"; scaffold_679 StringTie exon 39472 39579 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "5"; scaffold_679 StringTie exon 39806 39931 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "6"; scaffold_679 StringTie exon 40023 40133 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "7"; scaffold_679 StringTie exon 40600 40715 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "8"; scaffold_679 StringTie exon 42229 42429 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "9"; scaffold_679 StringTie exon 42964 43158 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "10"; scaffold_679 StringTie exon 43620 44123 1000 + . gene_id "MSTRG.118030"; transcript_id "MSTRG.118030.2"; exon_number "11"; scaffold_679 StringTie exon 357987 358047 1000 - . gene_id "MSTRG.118041"; transcript_id "MSTRG.118041.1"; exon_number "1"; scaffold_679 StringTie exon 365543 365716 1000 - . gene_id "MSTRG.118041"; transcript_id "MSTRG.118041.1"; exon_number "2"; scaffold_679 StringTie exon 365803 365892 1000 - . gene_id "MSTRG.118041"; transcript_id "MSTRG.118041.1"; exon_number "3"; scaffold_679 StringTie exon 366184 366312 1000 - . gene_id "MSTRG.118041"; transcript_id "MSTRG.118041.1"; exon_number "4"; scaffold_679 StringTie exon 368381 368417 1000 - . gene_id "MSTRG.118041"; transcript_id "MSTRG.118041.1"; exon_number "5"; scaffold_679 StringTie exon 368517 368547 1000 - . gene_id "MSTRG.118041"; transcript_id "MSTRG.118041.1"; exon_number "6"; scaffold_679 StringTie exon 370228 370292 1000 - . gene_id "MSTRG.118041"; transcript_id "MSTRG.118041.1"; exon_number "7"; scaffold_67928 StringTie exon 800 1205 1000 . . gene_id "MSTRG.118070"; transcript_id "MSTRG.118070.1"; exon_number "1"; scaffold_67937 StringTie exon 2029 2249 1000 . . gene_id "MSTRG.118074"; transcript_id "MSTRG.118074.1"; exon_number "1"; scaffold_6794 StringTie exon 4920 5140 1000 . . gene_id "MSTRG.118076"; transcript_id "MSTRG.118076.1"; exon_number "1"; scaffold_6794 StringTie exon 31290 31944 1000 . . gene_id "MSTRG.118078"; transcript_id "MSTRG.118078.1"; exon_number "1"; scaffold_6796 StringTie exon 4817 7606 1000 . . gene_id "MSTRG.118089"; transcript_id "MSTRG.118089.1"; exon_number "1"; scaffold_67989 StringTie exon 1250 1522 1000 . . gene_id "MSTRG.118103"; transcript_id "MSTRG.118103.1"; exon_number "1"; scaffold_68 StringTie exon 326285 326503 1000 - . gene_id "MSTRG.118129"; transcript_id "MSTRG.118129.1"; exon_number "1"; scaffold_68 StringTie exon 327673 327743 1000 - . gene_id "MSTRG.118129"; transcript_id "MSTRG.118129.1"; exon_number "2"; scaffold_68 StringTie exon 526874 527080 1000 . . gene_id "MSTRG.118145"; transcript_id "MSTRG.118145.1"; exon_number "1"; scaffold_68 StringTie exon 628647 628870 1000 . . gene_id "MSTRG.118156"; transcript_id "MSTRG.118156.1"; exon_number "1"; scaffold_68 StringTie exon 706780 707034 1000 . . gene_id "MSTRG.118167"; transcript_id "MSTRG.118167.1"; exon_number "1"; scaffold_68 StringTie exon 765523 765752 1000 . . gene_id "MSTRG.118181"; transcript_id "MSTRG.118181.1"; exon_number "1"; scaffold_68 StringTie exon 810046 810277 1000 . . gene_id "MSTRG.118182"; transcript_id "MSTRG.118182.1"; exon_number "1"; scaffold_68 StringTie exon 900419 900640 1000 . . gene_id "MSTRG.118189"; transcript_id "MSTRG.118189.1"; exon_number "1"; scaffold_68 StringTie exon 1099263 1099473 1000 . . gene_id "MSTRG.118191"; transcript_id "MSTRG.118191.1"; exon_number "1"; scaffold_68 StringTie exon 1189213 1189959 1000 . . gene_id "MSTRG.118201"; transcript_id "MSTRG.118201.1"; exon_number "1"; scaffold_68 StringTie exon 1263500 1263513 1000 - . gene_id "MSTRG.118215"; transcript_id "MSTRG.118215.1"; exon_number "1"; scaffold_68 StringTie exon 1273602 1273824 1000 - . gene_id "MSTRG.118215"; transcript_id "MSTRG.118215.1"; exon_number "2"; scaffold_68 StringTie exon 1618148 1618422 1000 . . gene_id "MSTRG.118238"; transcript_id "MSTRG.118238.1"; exon_number "1"; scaffold_68 StringTie exon 1631700 1631918 1000 . . gene_id "MSTRG.118241"; transcript_id "MSTRG.118241.1"; exon_number "1"; scaffold_68 StringTie exon 1960763 1961089 1000 . . gene_id "MSTRG.118258"; transcript_id "MSTRG.118258.1"; exon_number "1"; scaffold_68 StringTie exon 1976011 1976411 1000 - . gene_id "MSTRG.118261"; transcript_id "MSTRG.118261.1"; exon_number "1"; scaffold_68 StringTie exon 1976929 1977011 1000 - . gene_id "MSTRG.118261"; transcript_id "MSTRG.118261.1"; exon_number "2"; scaffold_68 StringTie exon 1977170 1977211 1000 - . gene_id "MSTRG.118261"; transcript_id "MSTRG.118261.1"; exon_number "3"; scaffold_68 StringTie exon 1977422 1977467 1000 - . gene_id "MSTRG.118261"; transcript_id "MSTRG.118261.1"; exon_number "4"; scaffold_680 StringTie exon 1849 2122 1000 . . gene_id "MSTRG.118265"; transcript_id "MSTRG.118265.1"; exon_number "1"; scaffold_680 StringTie exon 69355 69500 1000 - . gene_id "MSTRG.118273"; transcript_id "MSTRG.118273.1"; exon_number "1"; scaffold_680 StringTie exon 69694 69819 1000 - . gene_id "MSTRG.118273"; transcript_id "MSTRG.118273.1"; exon_number "2"; scaffold_680 StringTie exon 69898 70035 1000 - . gene_id "MSTRG.118273"; transcript_id "MSTRG.118273.1"; exon_number "3"; scaffold_680 StringTie exon 70160 70240 1000 - . gene_id "MSTRG.118273"; transcript_id "MSTRG.118273.1"; exon_number "4"; scaffold_680 StringTie exon 72223 72393 1000 - . gene_id "MSTRG.118273"; transcript_id "MSTRG.118273.1"; exon_number "5"; scaffold_680 StringTie exon 74198 74363 1000 - . gene_id "MSTRG.118273"; transcript_id "MSTRG.118273.1"; exon_number "6"; scaffold_680 StringTie exon 74499 74553 1000 - . gene_id "MSTRG.118273"; transcript_id "MSTRG.118273.1"; exon_number "7"; scaffold_680 StringTie exon 74640 74761 1000 - . gene_id "MSTRG.118273"; transcript_id "MSTRG.118273.1"; exon_number "8"; scaffold_680 StringTie exon 361720 361857 1000 + . gene_id "MSTRG.118290"; transcript_id "MSTRG.118290.1"; exon_number "1"; scaffold_680 StringTie exon 362116 362246 1000 + . gene_id "MSTRG.118290"; transcript_id "MSTRG.118290.1"; exon_number "2"; scaffold_680 StringTie exon 560343 560560 1000 . . gene_id "MSTRG.118311"; transcript_id "MSTRG.118311.1"; exon_number "1"; scaffold_6802 StringTie exon 24936 25315 1000 . . gene_id "MSTRG.118325"; transcript_id "MSTRG.118325.1"; exon_number "1"; scaffold_68082 StringTie exon 1408 1579 1000 + . gene_id "MSTRG.118357"; transcript_id "MSTRG.118357.1"; exon_number "1"; scaffold_68082 StringTie exon 1949 2066 1000 + . gene_id "MSTRG.118357"; transcript_id "MSTRG.118357.1"; exon_number "2"; scaffold_681 StringTie exon 42345 42998 1000 - . gene_id "MSTRG.118368"; transcript_id "MSTRG.118368.2"; exon_number "1"; scaffold_681 StringTie exon 43019 43076 1000 - . gene_id "MSTRG.118368"; transcript_id "MSTRG.118368.2"; exon_number "2"; scaffold_681 StringTie exon 60290 60382 1000 - . gene_id "MSTRG.118368"; transcript_id "MSTRG.118368.2"; exon_number "3"; scaffold_681 StringTie exon 43832 43853 1000 + . gene_id "MSTRG.118369"; transcript_id "MSTRG.118369.1"; exon_number "1"; scaffold_681 StringTie exon 60183 60380 1000 + . gene_id "MSTRG.118369"; transcript_id "MSTRG.118369.1"; exon_number "2"; scaffold_681 StringTie exon 136766 137040 1000 . . gene_id "MSTRG.118374"; transcript_id "MSTRG.118374.1"; exon_number "1"; scaffold_6812 StringTie exon 28586 28696 1000 - . gene_id "MSTRG.118409"; transcript_id "MSTRG.118409.1"; exon_number "1"; scaffold_6812 StringTie exon 28791 28853 1000 - . gene_id "MSTRG.118409"; transcript_id "MSTRG.118409.1"; exon_number "2"; scaffold_6812 StringTie exon 29099 29276 1000 - . gene_id "MSTRG.118409"; transcript_id "MSTRG.118409.1"; exon_number "3"; scaffold_6812 StringTie exon 29542 29710 1000 - . gene_id "MSTRG.118409"; transcript_id "MSTRG.118409.1"; exon_number "4"; scaffold_6812 StringTie exon 29979 30200 1000 - . gene_id "MSTRG.118409"; transcript_id "MSTRG.118409.1"; exon_number "5"; scaffold_68181 StringTie exon 1667 2133 1000 . . gene_id "MSTRG.118430"; transcript_id "MSTRG.118430.1"; exon_number "1"; scaffold_682 StringTie exon 51049 51320 1000 . . gene_id "MSTRG.118441"; transcript_id "MSTRG.118441.1"; exon_number "1"; scaffold_6821 StringTie exon 27383 27547 1000 + . gene_id "MSTRG.118475"; transcript_id "MSTRG.118475.1"; exon_number "1"; scaffold_6821 StringTie exon 28504 28594 1000 + . gene_id "MSTRG.118475"; transcript_id "MSTRG.118475.1"; exon_number "2"; scaffold_68223 StringTie exon 810 1064 1000 + . gene_id "MSTRG.118481"; transcript_id "MSTRG.118481.1"; exon_number "1"; scaffold_68223 StringTie exon 1570 1887 1000 + . gene_id "MSTRG.118481"; transcript_id "MSTRG.118481.1"; exon_number "2"; scaffold_68224 StringTie exon 1879 2083 1000 . . gene_id "MSTRG.118482"; transcript_id "MSTRG.118482.1"; exon_number "1"; scaffold_68229 StringTie exon 103 595 1000 . . gene_id "MSTRG.118484"; transcript_id "MSTRG.118484.1"; exon_number "1"; scaffold_68244 StringTie exon 926 1190 1000 . . gene_id "MSTRG.118490"; transcript_id "MSTRG.118490.1"; exon_number "1"; scaffold_6829 StringTie exon 14339 17024 1000 - . gene_id "MSTRG.118512"; transcript_id "MSTRG.118512.1"; exon_number "1"; scaffold_683 StringTie exon 457448 457788 1000 - . gene_id "MSTRG.118533"; transcript_id "MSTRG.118533.1"; exon_number "1"; scaffold_683 StringTie exon 556642 556876 1000 . . gene_id "MSTRG.118536"; transcript_id "MSTRG.118536.1"; exon_number "1"; scaffold_68309 StringTie exon 122 518 1000 . . gene_id "MSTRG.118543"; transcript_id "MSTRG.118543.1"; exon_number "1"; scaffold_6834 StringTie exon 24030 24296 1000 . . gene_id "MSTRG.118563"; transcript_id "MSTRG.118563.1"; exon_number "1"; scaffold_684 StringTie exon 590 789 1000 + . gene_id "MSTRG.118581"; transcript_id "MSTRG.118581.1"; exon_number "1"; scaffold_684 StringTie exon 4354 4638 1000 . . gene_id "MSTRG.118582"; transcript_id "MSTRG.118582.1"; exon_number "1"; scaffold_684 StringTie exon 220905 221528 1000 . . gene_id "MSTRG.118598"; transcript_id "MSTRG.118598.1"; exon_number "1"; scaffold_684 StringTie exon 237763 237884 1000 + . gene_id "MSTRG.118602"; transcript_id "MSTRG.118602.1"; exon_number "1"; scaffold_684 StringTie exon 238964 239706 1000 + . gene_id "MSTRG.118602"; transcript_id "MSTRG.118602.1"; exon_number "2"; scaffold_684 StringTie exon 256090 256349 1000 . . gene_id "MSTRG.118609"; transcript_id "MSTRG.118609.1"; exon_number "1"; scaffold_684 StringTie exon 380592 380840 1000 . . gene_id "MSTRG.118617"; transcript_id "MSTRG.118617.1"; exon_number "1"; scaffold_684 StringTie exon 443749 444053 1000 . . gene_id "MSTRG.118630"; transcript_id "MSTRG.118630.1"; exon_number "1"; scaffold_68412 StringTie exon 37 329 1000 . . gene_id "MSTRG.118647"; transcript_id "MSTRG.118647.1"; exon_number "1"; scaffold_68415 StringTie exon 1605 2237 1000 . . gene_id "MSTRG.118649"; transcript_id "MSTRG.118649.1"; exon_number "1"; scaffold_6842 StringTie exon 24878 25193 1000 - . gene_id "MSTRG.118655"; transcript_id "MSTRG.118655.1"; exon_number "1"; scaffold_6843 StringTie exon 32037 32487 1000 . . gene_id "MSTRG.118664"; transcript_id "MSTRG.118664.1"; exon_number "1"; scaffold_68445 StringTie exon 297 644 1000 . . gene_id "MSTRG.118672"; transcript_id "MSTRG.118672.1"; exon_number "1"; scaffold_68477 StringTie exon 1 160 1000 - . gene_id "MSTRG.118692"; transcript_id "MSTRG.118692.1"; exon_number "1"; scaffold_68477 StringTie exon 521 624 1000 - . gene_id "MSTRG.118692"; transcript_id "MSTRG.118692.1"; exon_number "2"; scaffold_68477 StringTie exon 985 1074 1000 - . gene_id "MSTRG.118692"; transcript_id "MSTRG.118692.1"; exon_number "3"; scaffold_68478 StringTie exon 780 1026 1000 . . gene_id "MSTRG.118693"; transcript_id "MSTRG.118693.1"; exon_number "1"; scaffold_68481 StringTie exon 43 298 1000 . . gene_id "MSTRG.118694"; transcript_id "MSTRG.118694.1"; exon_number "1"; scaffold_685 StringTie exon 166968 167197 1000 . . gene_id "MSTRG.118711"; transcript_id "MSTRG.118711.1"; exon_number "1"; scaffold_685 StringTie exon 401120 401346 1000 . . gene_id "MSTRG.118736"; transcript_id "MSTRG.118736.1"; exon_number "1"; scaffold_685 StringTie exon 432963 432988 1000 - . gene_id "MSTRG.118742"; transcript_id "MSTRG.118742.1"; exon_number "1"; scaffold_685 StringTie exon 433079 433243 1000 - . gene_id "MSTRG.118742"; transcript_id "MSTRG.118742.1"; exon_number "2"; scaffold_685 StringTie exon 433515 433662 1000 - . gene_id "MSTRG.118742"; transcript_id "MSTRG.118742.1"; exon_number "3"; scaffold_685 StringTie exon 437849 437998 1000 - . gene_id "MSTRG.118742"; transcript_id "MSTRG.118742.1"; exon_number "4"; scaffold_6850 StringTie exon 14842 15069 1000 . . gene_id "MSTRG.118756"; transcript_id "MSTRG.118756.1"; exon_number "1"; scaffold_6852 StringTie exon 5080 5328 1000 . . gene_id "MSTRG.118765"; transcript_id "MSTRG.118765.1"; exon_number "1"; scaffold_6856 StringTie exon 18995 19209 1000 . . gene_id "MSTRG.118789"; transcript_id "MSTRG.118789.1"; exon_number "1"; scaffold_68595 StringTie exon 1324 1670 1000 . . gene_id "MSTRG.118810"; transcript_id "MSTRG.118810.1"; exon_number "1"; scaffold_68599 StringTie exon 455 998 1000 - . gene_id "MSTRG.118813"; transcript_id "MSTRG.118813.1"; exon_number "1"; scaffold_68599 StringTie exon 1820 2186 1000 - . gene_id "MSTRG.118813"; transcript_id "MSTRG.118813.1"; exon_number "2"; scaffold_686 StringTie exon 5816 6176 1000 . . gene_id "MSTRG.118814"; transcript_id "MSTRG.118814.1"; exon_number "1"; scaffold_686 StringTie exon 222532 222871 1000 . . gene_id "MSTRG.118831"; transcript_id "MSTRG.118831.1"; exon_number "1"; scaffold_686 StringTie exon 317528 317745 1000 . . gene_id "MSTRG.118834"; transcript_id "MSTRG.118834.1"; exon_number "1"; scaffold_686 StringTie exon 318134 318408 1000 . . gene_id "MSTRG.118835"; transcript_id "MSTRG.118835.1"; exon_number "1"; scaffold_686 StringTie exon 403125 403282 1000 + . gene_id "MSTRG.118845"; transcript_id "MSTRG.118845.1"; exon_number "1"; scaffold_686 StringTie exon 482561 482746 1000 + . gene_id "MSTRG.118845"; transcript_id "MSTRG.118845.1"; exon_number "2"; scaffold_686 StringTie exon 526666 526904 1000 . . gene_id "MSTRG.118865"; transcript_id "MSTRG.118865.1"; exon_number "1"; scaffold_6860 StringTie exon 10602 10975 1000 . . gene_id "MSTRG.118868"; transcript_id "MSTRG.118868.1"; exon_number "1"; scaffold_68603 StringTie exon 695 977 1000 . . gene_id "MSTRG.118873"; transcript_id "MSTRG.118873.1"; exon_number "1"; scaffold_6862 StringTie exon 14962 15242 1000 . . gene_id "MSTRG.118881"; transcript_id "MSTRG.118881.1"; exon_number "1"; scaffold_68633 StringTie exon 1362 1772 1000 . . gene_id "MSTRG.118889"; transcript_id "MSTRG.118889.1"; exon_number "1"; scaffold_6865 StringTie exon 13628 13662 1000 + . gene_id "MSTRG.118898"; transcript_id "MSTRG.118898.1"; exon_number "1"; scaffold_6865 StringTie exon 15594 16323 1000 + . gene_id "MSTRG.118898"; transcript_id "MSTRG.118898.1"; exon_number "2"; scaffold_6868 StringTie exon 14613 14954 1000 . . gene_id "MSTRG.118911"; transcript_id "MSTRG.118911.1"; exon_number "1"; scaffold_687 StringTie exon 280140 280410 1000 . . gene_id "MSTRG.118932"; transcript_id "MSTRG.118932.1"; exon_number "1"; scaffold_687 StringTie exon 429650 429850 1000 . . gene_id "MSTRG.118938"; transcript_id "MSTRG.118938.1"; exon_number "1"; scaffold_6870 StringTie exon 27404 27786 1000 . . gene_id "MSTRG.118944"; transcript_id "MSTRG.118944.1"; exon_number "1"; scaffold_68732 StringTie exon 894 1145 1000 . . gene_id "MSTRG.118953"; transcript_id "MSTRG.118953.1"; exon_number "1"; scaffold_6874 StringTie exon 1642 1916 1000 . . gene_id "MSTRG.118957"; transcript_id "MSTRG.118957.1"; exon_number "1"; scaffold_6874 StringTie exon 7827 8709 1000 . . gene_id "MSTRG.118959"; transcript_id "MSTRG.118959.1"; exon_number "1"; scaffold_688 StringTie exon 310468 310685 1000 + . gene_id "MSTRG.119002"; transcript_id "MSTRG.119002.1"; exon_number "1"; scaffold_688 StringTie exon 310892 311031 1000 + . gene_id "MSTRG.119002"; transcript_id "MSTRG.119002.1"; exon_number "2"; scaffold_688 StringTie exon 311221 311321 1000 + . gene_id "MSTRG.119002"; transcript_id "MSTRG.119002.1"; exon_number "3"; scaffold_688 StringTie exon 312972 313040 1000 + . gene_id "MSTRG.119002"; transcript_id "MSTRG.119002.1"; exon_number "4"; scaffold_688 StringTie exon 561244 561494 1000 . . gene_id "MSTRG.119032"; transcript_id "MSTRG.119032.1"; exon_number "1"; scaffold_6881 StringTie exon 21398 21610 1000 . . gene_id "MSTRG.119037"; transcript_id "MSTRG.119037.1"; exon_number "1"; scaffold_6884 StringTie exon 8303 8503 1000 . . gene_id "MSTRG.119049"; transcript_id "MSTRG.119049.1"; exon_number "1"; scaffold_68885 StringTie exon 1961 2189 1000 . . gene_id "MSTRG.119076"; transcript_id "MSTRG.119076.1"; exon_number "1"; scaffold_689 StringTie exon 216957 217243 1000 . . gene_id "MSTRG.119094"; transcript_id "MSTRG.119094.1"; exon_number "1"; scaffold_689 StringTie exon 380587 380936 1000 . . gene_id "MSTRG.119107"; transcript_id "MSTRG.119107.1"; exon_number "1"; scaffold_6892 StringTie exon 1032 1245 1000 . . gene_id "MSTRG.119127"; transcript_id "MSTRG.119127.1"; exon_number "1"; scaffold_6893 StringTie exon 30101 30356 1000 . . gene_id "MSTRG.119131"; transcript_id "MSTRG.119131.1"; exon_number "1"; scaffold_6897 StringTie exon 3890 4164 1000 . . gene_id "MSTRG.119152"; transcript_id "MSTRG.119152.1"; exon_number "1"; scaffold_69 StringTie exon 115193 115496 1000 . . gene_id "MSTRG.119176"; transcript_id "MSTRG.119176.1"; exon_number "1"; scaffold_69 StringTie exon 270806 270960 1000 - . gene_id "MSTRG.119186"; transcript_id "MSTRG.119186.1"; exon_number "1"; scaffold_69 StringTie exon 271227 271463 1000 - . gene_id "MSTRG.119186"; transcript_id "MSTRG.119186.1"; exon_number "2"; scaffold_69 StringTie exon 271634 271721 1000 - . gene_id "MSTRG.119186"; transcript_id "MSTRG.119186.1"; exon_number "3"; scaffold_69 StringTie exon 272254 272394 1000 - . gene_id "MSTRG.119186"; transcript_id "MSTRG.119186.1"; exon_number "4"; scaffold_69 StringTie exon 272579 272723 1000 - . gene_id "MSTRG.119186"; transcript_id "MSTRG.119186.1"; exon_number "5"; scaffold_69 StringTie exon 273051 273126 1000 - . gene_id "MSTRG.119186"; transcript_id "MSTRG.119186.1"; exon_number "6"; scaffold_69 StringTie exon 285744 285815 1000 + . gene_id "MSTRG.119187"; transcript_id "MSTRG.119187.1"; exon_number "1"; scaffold_69 StringTie exon 291567 291703 1000 + . gene_id "MSTRG.119187"; transcript_id "MSTRG.119187.1"; exon_number "2"; scaffold_69 StringTie exon 1056028 1056289 1000 . . gene_id "MSTRG.119225"; transcript_id "MSTRG.119225.1"; exon_number "1"; scaffold_69 StringTie exon 1100297 1100526 1000 . . gene_id "MSTRG.119226"; transcript_id "MSTRG.119226.1"; exon_number "1"; scaffold_69 StringTie exon 1240278 1240573 1000 . . gene_id "MSTRG.119235"; transcript_id "MSTRG.119235.1"; exon_number "1"; scaffold_690 StringTie exon 29923 31132 1000 . . gene_id "MSTRG.119284"; transcript_id "MSTRG.119284.1"; exon_number "1"; scaffold_690 StringTie exon 191681 191997 1000 . . gene_id "MSTRG.119309"; transcript_id "MSTRG.119309.1"; exon_number "1"; scaffold_690 StringTie exon 228422 229655 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "1"; scaffold_690 StringTie exon 229750 229882 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "2"; scaffold_690 StringTie exon 231289 231452 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "3"; scaffold_690 StringTie exon 231652 231830 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "4"; scaffold_690 StringTie exon 231961 232080 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "5"; scaffold_690 StringTie exon 232196 232308 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "6"; scaffold_690 StringTie exon 232427 232602 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "7"; scaffold_690 StringTie exon 232751 232858 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "8"; scaffold_690 StringTie exon 234133 234303 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "9"; scaffold_690 StringTie exon 235511 235675 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "10"; scaffold_690 StringTie exon 235921 236160 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "11"; scaffold_690 StringTie exon 236283 236408 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "12"; scaffold_690 StringTie exon 236704 236832 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "13"; scaffold_690 StringTie exon 240303 240384 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "14"; scaffold_690 StringTie exon 240515 240612 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "15"; scaffold_690 StringTie exon 240703 240789 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "16"; scaffold_690 StringTie exon 241501 241667 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "17"; scaffold_690 StringTie exon 242082 242277 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "18"; scaffold_690 StringTie exon 246770 247436 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "19"; scaffold_690 StringTie exon 263878 263930 1000 - . gene_id "MSTRG.119318"; transcript_id "MSTRG.119318.2"; exon_number "20"; scaffold_690 StringTie exon 386336 386386 1000 + . gene_id "MSTRG.119329"; transcript_id "MSTRG.119329.1"; exon_number "1"; scaffold_690 StringTie exon 386790 386891 1000 + . gene_id "MSTRG.119329"; transcript_id "MSTRG.119329.1"; exon_number "2"; scaffold_690 StringTie exon 387128 387206 1000 + . gene_id "MSTRG.119329"; transcript_id "MSTRG.119329.1"; exon_number "3"; scaffold_690 StringTie exon 504158 504498 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "1"; scaffold_690 StringTie exon 504717 504844 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "2"; scaffold_690 StringTie exon 505123 505294 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "3"; scaffold_690 StringTie exon 511725 511824 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "4"; scaffold_690 StringTie exon 512430 512485 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "5"; scaffold_690 StringTie exon 512586 512711 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "6"; scaffold_690 StringTie exon 513408 513593 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "7"; scaffold_690 StringTie exon 513747 513808 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "8"; scaffold_690 StringTie exon 513945 514154 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "9"; scaffold_690 StringTie exon 514355 514474 1000 + . gene_id "MSTRG.119342"; transcript_id "MSTRG.119342.1"; exon_number "10"; scaffold_690 StringTie exon 539212 539244 1000 + . gene_id "MSTRG.119347"; transcript_id "MSTRG.119347.1"; exon_number "1"; scaffold_690 StringTie exon 540659 540757 1000 + . gene_id "MSTRG.119347"; transcript_id "MSTRG.119347.1"; exon_number "2"; scaffold_690 StringTie exon 540958 541051 1000 + . gene_id "MSTRG.119347"; transcript_id "MSTRG.119347.1"; exon_number "3"; scaffold_6900 StringTie exon 9806 10366 1000 . . gene_id "MSTRG.119349"; transcript_id "MSTRG.119349.1"; exon_number "1"; scaffold_6901 StringTie exon 20844 21001 1000 + . gene_id "MSTRG.119354"; transcript_id "MSTRG.119354.1"; exon_number "1"; scaffold_6901 StringTie exon 21330 21379 1000 + . gene_id "MSTRG.119354"; transcript_id "MSTRG.119354.1"; exon_number "2"; scaffold_69011 StringTie exon 1877 2193 1000 + . gene_id "MSTRG.119355"; transcript_id "MSTRG.119355.1"; exon_number "1"; scaffold_6903 StringTie exon 6860 7225 1000 . . gene_id "MSTRG.119359"; transcript_id "MSTRG.119359.1"; exon_number "1"; scaffold_6904 StringTie exon 1848 2154 1000 . . gene_id "MSTRG.119368"; transcript_id "MSTRG.119368.1"; exon_number "1"; scaffold_69050 StringTie exon 61 304 1000 . . gene_id "MSTRG.119377"; transcript_id "MSTRG.119377.1"; exon_number "1"; scaffold_6906 StringTie exon 6027 6251 1000 . . gene_id "MSTRG.119381"; transcript_id "MSTRG.119381.1"; exon_number "1"; scaffold_6906 StringTie exon 24120 24496 1000 . . gene_id "MSTRG.119383"; transcript_id "MSTRG.119383.1"; exon_number "1"; scaffold_6906 StringTie exon 32706 32931 1000 . . gene_id "MSTRG.119385"; transcript_id "MSTRG.119385.1"; exon_number "1"; scaffold_691 StringTie exon 76166 76437 1000 . . gene_id "MSTRG.119404"; transcript_id "MSTRG.119404.1"; exon_number "1"; scaffold_691 StringTie exon 216804 217122 1000 - . gene_id "MSTRG.119410"; transcript_id "MSTRG.119410.1"; exon_number "1"; scaffold_691 StringTie exon 420668 420880 1000 . . gene_id "MSTRG.119414"; transcript_id "MSTRG.119414.1"; exon_number "1"; scaffold_691 StringTie exon 491774 492579 1000 . . gene_id "MSTRG.119421"; transcript_id "MSTRG.119421.1"; exon_number "1"; scaffold_69109 StringTie exon 1288 1586 1000 . . gene_id "MSTRG.119432"; transcript_id "MSTRG.119432.1"; exon_number "1"; scaffold_6911 StringTie exon 14502 15072 1000 . . gene_id "MSTRG.119433"; transcript_id "MSTRG.119433.1"; exon_number "1"; scaffold_69136 StringTie exon 1045 1263 1000 . . gene_id "MSTRG.119444"; transcript_id "MSTRG.119444.1"; exon_number "1"; scaffold_692 StringTie exon 451772 452040 1000 . . gene_id "MSTRG.119500"; transcript_id "MSTRG.119500.1"; exon_number "1"; scaffold_6920 StringTie exon 24172 24425 1000 . . gene_id "MSTRG.119512"; transcript_id "MSTRG.119512.1"; exon_number "1"; scaffold_69266 StringTie exon 1410 1843 1000 . . gene_id "MSTRG.119543"; transcript_id "MSTRG.119543.1"; exon_number "1"; scaffold_69277 StringTie exon 187 639 1000 . . gene_id "MSTRG.119551"; transcript_id "MSTRG.119551.1"; exon_number "1"; scaffold_693 StringTie exon 110258 110486 1000 . . gene_id "MSTRG.119567"; transcript_id "MSTRG.119567.1"; exon_number "1"; scaffold_693 StringTie exon 190752 190971 1000 . . gene_id "MSTRG.119576"; transcript_id "MSTRG.119576.1"; exon_number "1"; scaffold_693 StringTie exon 330405 330610 1000 . . gene_id "MSTRG.119588"; transcript_id "MSTRG.119588.1"; exon_number "1"; scaffold_693 StringTie exon 353179 353397 1000 . . gene_id "MSTRG.119595"; transcript_id "MSTRG.119595.1"; exon_number "1"; scaffold_693 StringTie exon 465550 465722 1000 - . gene_id "MSTRG.119606"; transcript_id "MSTRG.119606.1"; exon_number "1"; scaffold_693 StringTie exon 465981 466125 1000 - . gene_id "MSTRG.119606"; transcript_id "MSTRG.119606.1"; exon_number "2"; scaffold_693 StringTie exon 466316 466383 1000 - . gene_id "MSTRG.119606"; transcript_id "MSTRG.119606.1"; exon_number "3"; scaffold_693 StringTie exon 466520 466566 1000 - . gene_id "MSTRG.119606"; transcript_id "MSTRG.119606.1"; exon_number "4"; scaffold_693 StringTie exon 466741 466800 1000 - . gene_id "MSTRG.119606"; transcript_id "MSTRG.119606.1"; exon_number "5"; scaffold_69310 StringTie exon 1077 1881 1000 . . gene_id "MSTRG.119625"; transcript_id "MSTRG.119625.1"; exon_number "1"; scaffold_69353 StringTie exon 1127 1333 1000 . . gene_id "MSTRG.119648"; transcript_id "MSTRG.119648.1"; exon_number "1"; scaffold_6936 StringTie exon 16014 16251 1000 . . gene_id "MSTRG.119649"; transcript_id "MSTRG.119649.1"; exon_number "1"; scaffold_69381 StringTie exon 68 290 1000 . . gene_id "MSTRG.119662"; transcript_id "MSTRG.119662.1"; exon_number "1"; scaffold_694 StringTie exon 73185 73519 1000 + . gene_id "MSTRG.119672"; transcript_id "MSTRG.119672.2"; exon_number "1"; scaffold_694 StringTie exon 73591 73839 1000 + . gene_id "MSTRG.119672"; transcript_id "MSTRG.119672.2"; exon_number "2"; scaffold_694 StringTie exon 381075 382034 1000 - . gene_id "MSTRG.119711"; transcript_id "MSTRG.119711.1"; exon_number "1"; scaffold_694 StringTie exon 382616 382720 1000 - . gene_id "MSTRG.119711"; transcript_id "MSTRG.119711.1"; exon_number "2"; scaffold_694 StringTie exon 389900 390047 1000 - . gene_id "MSTRG.119711"; transcript_id "MSTRG.119711.1"; exon_number "3"; scaffold_694 StringTie exon 390247 390314 1000 - . gene_id "MSTRG.119711"; transcript_id "MSTRG.119711.1"; exon_number "4"; scaffold_694 StringTie exon 443691 443905 1000 . . gene_id "MSTRG.119717"; transcript_id "MSTRG.119717.1"; exon_number "1"; scaffold_694 StringTie exon 501882 502099 1000 . . gene_id "MSTRG.119722"; transcript_id "MSTRG.119722.1"; exon_number "1"; scaffold_694 StringTie exon 546656 546966 1000 . . gene_id "MSTRG.119724"; transcript_id "MSTRG.119724.1"; exon_number "1"; scaffold_69401 StringTie exon 1802 2211 1000 . . gene_id "MSTRG.119729"; transcript_id "MSTRG.119729.1"; exon_number "1"; scaffold_6947 StringTie exon 3324 3624 1000 . . gene_id "MSTRG.119758"; transcript_id "MSTRG.119758.1"; exon_number "1"; scaffold_69488 StringTie exon 1 214 1000 . . gene_id "MSTRG.119762"; transcript_id "MSTRG.119762.1"; exon_number "1"; scaffold_6949 StringTie exon 12548 12842 1000 . . gene_id "MSTRG.119764"; transcript_id "MSTRG.119764.1"; exon_number "1"; scaffold_695 StringTie exon 56683 57071 1000 . . gene_id "MSTRG.119780"; transcript_id "MSTRG.119780.1"; exon_number "1"; scaffold_695 StringTie exon 156367 156687 1000 . . gene_id "MSTRG.119787"; transcript_id "MSTRG.119787.1"; exon_number "1"; scaffold_695 StringTie exon 278175 278461 1000 . . gene_id "MSTRG.119789"; transcript_id "MSTRG.119789.1"; exon_number "1"; scaffold_6950 StringTie exon 10648 11474 1000 + . gene_id "MSTRG.119803"; transcript_id "MSTRG.119803.2"; exon_number "1"; scaffold_6950 StringTie exon 11639 12285 1000 + . gene_id "MSTRG.119803"; transcript_id "MSTRG.119803.2"; exon_number "2"; scaffold_6952 StringTie exon 4226 4450 1000 . . gene_id "MSTRG.119815"; transcript_id "MSTRG.119815.1"; exon_number "1"; scaffold_6958 StringTie exon 5009 5127 1000 + . gene_id "MSTRG.119837"; transcript_id "MSTRG.119837.1"; exon_number "1"; scaffold_6958 StringTie exon 5304 5429 1000 + . gene_id "MSTRG.119837"; transcript_id "MSTRG.119837.1"; exon_number "2"; scaffold_6958 StringTie exon 5614 5756 1000 + . gene_id "MSTRG.119837"; transcript_id "MSTRG.119837.1"; exon_number "3"; scaffold_6958 StringTie exon 6112 6278 1000 + . gene_id "MSTRG.119837"; transcript_id "MSTRG.119837.1"; exon_number "4"; scaffold_6958 StringTie exon 9112 9168 1000 + . gene_id "MSTRG.119837"; transcript_id "MSTRG.119837.1"; exon_number "5"; scaffold_696 StringTie exon 67490 67649 1000 - . gene_id "MSTRG.119864"; transcript_id "MSTRG.119864.1"; exon_number "1"; scaffold_696 StringTie exon 67993 68108 1000 - . gene_id "MSTRG.119864"; transcript_id "MSTRG.119864.1"; exon_number "2"; scaffold_696 StringTie exon 70319 70394 1000 - . gene_id "MSTRG.119864"; transcript_id "MSTRG.119864.1"; exon_number "3"; scaffold_696 StringTie exon 70787 70886 1000 - . gene_id "MSTRG.119864"; transcript_id "MSTRG.119864.1"; exon_number "4"; scaffold_696 StringTie exon 73969 74060 1000 - . gene_id "MSTRG.119864"; transcript_id "MSTRG.119864.1"; exon_number "5"; scaffold_696 StringTie exon 74286 74362 1000 - . gene_id "MSTRG.119864"; transcript_id "MSTRG.119864.1"; exon_number "6"; scaffold_696 StringTie exon 75178 75295 1000 - . gene_id "MSTRG.119864"; transcript_id "MSTRG.119864.1"; exon_number "7"; scaffold_696 StringTie exon 77222 77697 1000 - . gene_id "MSTRG.119864"; transcript_id "MSTRG.119864.1"; exon_number "8"; scaffold_696 StringTie exon 187711 187948 1000 + . gene_id "MSTRG.119870"; transcript_id "MSTRG.119870.1"; exon_number "1"; scaffold_696 StringTie exon 190422 190512 1000 + . gene_id "MSTRG.119870"; transcript_id "MSTRG.119870.1"; exon_number "2"; scaffold_696 StringTie exon 190748 190858 1000 + . gene_id "MSTRG.119870"; transcript_id "MSTRG.119870.1"; exon_number "3"; scaffold_696 StringTie exon 191148 191296 1000 + . gene_id "MSTRG.119870"; transcript_id "MSTRG.119870.1"; exon_number "4"; scaffold_696 StringTie exon 191699 191717 1000 + . gene_id "MSTRG.119870"; transcript_id "MSTRG.119870.1"; exon_number "5"; scaffold_696 StringTie exon 191724 191927 1000 + . gene_id "MSTRG.119871"; transcript_id "MSTRG.119871.1"; exon_number "1"; scaffold_696 StringTie exon 192139 192221 1000 + . gene_id "MSTRG.119871"; transcript_id "MSTRG.119871.1"; exon_number "2"; scaffold_696 StringTie exon 204046 204589 1000 . . gene_id "MSTRG.119874"; transcript_id "MSTRG.119874.1"; exon_number "1"; scaffold_696 StringTie exon 266215 266607 1000 . . gene_id "MSTRG.119887"; transcript_id "MSTRG.119887.1"; exon_number "1"; scaffold_696 StringTie exon 269830 270228 1000 - . gene_id "MSTRG.119889"; transcript_id "MSTRG.119889.1"; exon_number "1"; scaffold_696 StringTie exon 273986 274092 1000 - . gene_id "MSTRG.119889"; transcript_id "MSTRG.119889.1"; exon_number "2"; scaffold_69613 StringTie exon 271 630 1000 . . gene_id "MSTRG.119914"; transcript_id "MSTRG.119914.1"; exon_number "1"; scaffold_6962 StringTie exon 12428 12648 1000 . . gene_id "MSTRG.119920"; transcript_id "MSTRG.119920.1"; exon_number "1"; scaffold_69642 StringTie exon 1324 1526 1000 . . gene_id "MSTRG.119933"; transcript_id "MSTRG.119933.1"; exon_number "1"; scaffold_69645 StringTie exon 1002 1237 1000 . . gene_id "MSTRG.119934"; transcript_id "MSTRG.119934.1"; exon_number "1"; scaffold_69653 StringTie exon 38 258 1000 . . gene_id "MSTRG.119942"; transcript_id "MSTRG.119942.1"; exon_number "1"; scaffold_6971 StringTie exon 21538 22061 1000 . . gene_id "MSTRG.119976"; transcript_id "MSTRG.119976.1"; exon_number "1"; scaffold_6974 StringTie exon 20005 20207 1000 . . gene_id "MSTRG.119987"; transcript_id "MSTRG.119987.1"; exon_number "1"; scaffold_69742 StringTie exon 260 599 1000 . . gene_id "MSTRG.119989"; transcript_id "MSTRG.119989.1"; exon_number "1"; scaffold_698 StringTie exon 462233 462594 1000 . . gene_id "MSTRG.120027"; transcript_id "MSTRG.120027.1"; exon_number "1"; scaffold_698 StringTie exon 506289 506404 1000 - . gene_id "MSTRG.120033"; transcript_id "MSTRG.120033.2"; exon_number "1"; scaffold_698 StringTie exon 506780 506951 1000 - . gene_id "MSTRG.120033"; transcript_id "MSTRG.120033.2"; exon_number "2"; scaffold_698 StringTie exon 508274 508376 1000 - . gene_id "MSTRG.120033"; transcript_id "MSTRG.120033.2"; exon_number "3"; scaffold_698 StringTie exon 511762 511797 1000 - . gene_id "MSTRG.120033"; transcript_id "MSTRG.120033.2"; exon_number "4"; scaffold_698 StringTie exon 512718 513101 1000 - . gene_id "MSTRG.120033"; transcript_id "MSTRG.120033.2"; exon_number "5"; scaffold_6988 StringTie exon 31412 31663 1000 . . gene_id "MSTRG.120073"; transcript_id "MSTRG.120073.1"; exon_number "1"; scaffold_699 StringTie exon 246087 246860 1000 . . gene_id "MSTRG.120105"; transcript_id "MSTRG.120105.1"; exon_number "1"; scaffold_699 StringTie exon 259277 259779 1000 . . gene_id "MSTRG.120107"; transcript_id "MSTRG.120107.1"; exon_number "1"; scaffold_699 StringTie exon 279248 279403 1000 - . gene_id "MSTRG.120112"; transcript_id "MSTRG.120112.1"; exon_number "1"; scaffold_699 StringTie exon 279752 279795 1000 - . gene_id "MSTRG.120112"; transcript_id "MSTRG.120112.1"; exon_number "2"; scaffold_699 StringTie exon 370695 371213 1000 - . gene_id "MSTRG.120124"; transcript_id "MSTRG.120124.1"; exon_number "1"; scaffold_699 StringTie exon 371443 371495 1000 - . gene_id "MSTRG.120124"; transcript_id "MSTRG.120124.1"; exon_number "2"; scaffold_699 StringTie exon 372175 372205 1000 - . gene_id "MSTRG.120125"; transcript_id "MSTRG.120125.1"; exon_number "1"; scaffold_699 StringTie exon 374283 374650 1000 - . gene_id "MSTRG.120125"; transcript_id "MSTRG.120125.1"; exon_number "2"; scaffold_6991 StringTie exon 9808 10053 1000 . . gene_id "MSTRG.120149"; transcript_id "MSTRG.120149.1"; exon_number "1"; scaffold_69922 StringTie exon 1900 2194 1000 . . gene_id "MSTRG.120157"; transcript_id "MSTRG.120157.1"; exon_number "1"; scaffold_7 StringTie exon 89935 90172 1000 . . gene_id "MSTRG.120197"; transcript_id "MSTRG.120197.1"; exon_number "1"; scaffold_7 StringTie exon 637498 638715 1000 . . gene_id "MSTRG.120237"; transcript_id "MSTRG.120237.1"; exon_number "1"; scaffold_7 StringTie exon 739511 739744 1000 . . gene_id "MSTRG.120243"; transcript_id "MSTRG.120243.1"; exon_number "1"; scaffold_7 StringTie exon 785371 785584 1000 . . gene_id "MSTRG.120249"; transcript_id "MSTRG.120249.1"; exon_number "1"; scaffold_7 StringTie exon 823101 823402 1000 . . gene_id "MSTRG.120253"; transcript_id "MSTRG.120253.1"; exon_number "1"; scaffold_7 StringTie exon 1266757 1266962 1000 . . gene_id "MSTRG.120272"; transcript_id "MSTRG.120272.1"; exon_number "1"; scaffold_7 StringTie exon 1760010 1760417 1000 . . gene_id "MSTRG.120294"; transcript_id "MSTRG.120294.1"; exon_number "1"; scaffold_7 StringTie exon 2285752 2286030 1000 . . gene_id "MSTRG.120321"; transcript_id "MSTRG.120321.1"; exon_number "1"; scaffold_7 StringTie exon 2600903 2601260 1000 . . gene_id "MSTRG.120334"; transcript_id "MSTRG.120334.1"; exon_number "1"; scaffold_7 StringTie exon 3050437 3051104 1000 . . gene_id "MSTRG.120357"; transcript_id "MSTRG.120357.1"; exon_number "1"; scaffold_7 StringTie exon 3059865 3060209 1000 . . gene_id "MSTRG.120358"; transcript_id "MSTRG.120358.1"; exon_number "1"; scaffold_7 StringTie exon 3117738 3117999 1000 . . gene_id "MSTRG.120361"; transcript_id "MSTRG.120361.1"; exon_number "1"; scaffold_7 StringTie exon 3149776 3149977 1000 . . gene_id "MSTRG.120363"; transcript_id "MSTRG.120363.1"; exon_number "1"; scaffold_70 StringTie exon 653774 654237 1000 . . gene_id "MSTRG.120411"; transcript_id "MSTRG.120411.1"; exon_number "1"; scaffold_70 StringTie exon 679357 679605 1000 . . gene_id "MSTRG.120412"; transcript_id "MSTRG.120412.1"; exon_number "1"; scaffold_70 StringTie exon 817653 817928 1000 . . gene_id "MSTRG.120418"; transcript_id "MSTRG.120418.1"; exon_number "1"; scaffold_70 StringTie exon 947878 948322 1000 . . gene_id "MSTRG.120429"; transcript_id "MSTRG.120429.1"; exon_number "1"; scaffold_70 StringTie exon 1767766 1767909 1000 - . gene_id "MSTRG.120474"; transcript_id "MSTRG.120474.1"; exon_number "1"; scaffold_70 StringTie exon 1770660 1770831 1000 - . gene_id "MSTRG.120474"; transcript_id "MSTRG.120474.1"; exon_number "2"; scaffold_70 StringTie exon 1771325 1771448 1000 - . gene_id "MSTRG.120474"; transcript_id "MSTRG.120474.1"; exon_number "3"; scaffold_70 StringTie exon 1771813 1771950 1000 - . gene_id "MSTRG.120474"; transcript_id "MSTRG.120474.1"; exon_number "4"; scaffold_70 StringTie exon 1772183 1772330 1000 - . gene_id "MSTRG.120474"; transcript_id "MSTRG.120474.1"; exon_number "5"; scaffold_70 StringTie exon 1895331 1895535 1000 . . gene_id "MSTRG.120478"; transcript_id "MSTRG.120478.1"; exon_number "1"; scaffold_700 StringTie exon 20264 20496 1000 . . gene_id "MSTRG.120486"; transcript_id "MSTRG.120486.1"; exon_number "1"; scaffold_700 StringTie exon 58966 59168 1000 . . gene_id "MSTRG.120490"; transcript_id "MSTRG.120490.1"; exon_number "1"; scaffold_700 StringTie exon 189228 189289 1000 + . gene_id "MSTRG.120505"; transcript_id "MSTRG.120505.2"; exon_number "1"; scaffold_700 StringTie exon 191094 191196 1000 + . gene_id "MSTRG.120505"; transcript_id "MSTRG.120505.2"; exon_number "2"; scaffold_700 StringTie exon 191623 191711 1000 + . gene_id "MSTRG.120505"; transcript_id "MSTRG.120505.2"; exon_number "3"; scaffold_700 StringTie exon 191810 191882 1000 + . gene_id "MSTRG.120505"; transcript_id "MSTRG.120505.2"; exon_number "4"; scaffold_700 StringTie exon 192094 192133 1000 + . gene_id "MSTRG.120505"; transcript_id "MSTRG.120505.2"; exon_number "5"; scaffold_700 StringTie exon 192929 193039 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "1"; scaffold_700 StringTie exon 193210 193429 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "2"; scaffold_700 StringTie exon 193739 193944 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "3"; scaffold_700 StringTie exon 194040 194215 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "4"; scaffold_700 StringTie exon 194632 194842 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "5"; scaffold_700 StringTie exon 196210 196310 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "6"; scaffold_700 StringTie exon 196413 196952 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "7"; scaffold_700 StringTie exon 197097 197146 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "8"; scaffold_700 StringTie exon 197352 198705 1000 + . gene_id "MSTRG.120506"; transcript_id "MSTRG.120506.1"; exon_number "9"; scaffold_700 StringTie exon 210630 210905 1000 . . gene_id "MSTRG.120509"; transcript_id "MSTRG.120509.1"; exon_number "1"; scaffold_700 StringTie exon 212963 213114 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "1"; scaffold_700 StringTie exon 215516 215659 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "2"; scaffold_700 StringTie exon 217304 217376 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "3"; scaffold_700 StringTie exon 218846 219053 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "4"; scaffold_700 StringTie exon 219178 219239 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "5"; scaffold_700 StringTie exon 219386 219577 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "6"; scaffold_700 StringTie exon 219806 219976 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "7"; scaffold_700 StringTie exon 220220 220357 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "8"; scaffold_700 StringTie exon 220510 220706 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "9"; scaffold_700 StringTie exon 220848 220969 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "10"; scaffold_700 StringTie exon 221098 221187 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "11"; scaffold_700 StringTie exon 221279 221380 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "12"; scaffold_700 StringTie exon 221469 221632 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "13"; scaffold_700 StringTie exon 221803 221968 1000 + . gene_id "MSTRG.120511"; transcript_id "MSTRG.120511.2"; exon_number "14"; scaffold_700 StringTie exon 228731 228939 1000 . . gene_id "MSTRG.120513"; transcript_id "MSTRG.120513.1"; exon_number "1"; scaffold_700 StringTie exon 456442 456571 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "1"; scaffold_700 StringTie exon 456942 457067 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "2"; scaffold_700 StringTie exon 457165 457287 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "3"; scaffold_700 StringTie exon 457431 457556 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "4"; scaffold_700 StringTie exon 457806 457931 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "5"; scaffold_700 StringTie exon 458122 458250 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "6"; scaffold_700 StringTie exon 468397 468522 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "7"; scaffold_700 StringTie exon 468828 469055 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "8"; scaffold_700 StringTie exon 469196 469321 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "9"; scaffold_700 StringTie exon 469508 469558 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "10"; scaffold_700 StringTie exon 469648 469785 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "11"; scaffold_700 StringTie exon 470542 470661 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "12"; scaffold_700 StringTie exon 472607 472732 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "13"; scaffold_700 StringTie exon 474386 474472 1000 - . gene_id "MSTRG.120535"; transcript_id "MSTRG.120535.2"; exon_number "14"; scaffold_70009 StringTie exon 1 203 1000 . . gene_id "MSTRG.120542"; transcript_id "MSTRG.120542.1"; exon_number "1"; scaffold_7002 StringTie exon 13076 13317 1000 . . gene_id "MSTRG.120547"; transcript_id "MSTRG.120547.1"; exon_number "1"; scaffold_7002 StringTie exon 15580 16032 1000 . . gene_id "MSTRG.120548"; transcript_id "MSTRG.120548.1"; exon_number "1"; scaffold_7003 StringTie exon 24365 24616 1000 . . gene_id "MSTRG.120552"; transcript_id "MSTRG.120552.1"; exon_number "1"; scaffold_7011 StringTie exon 5124 5362 1000 . . gene_id "MSTRG.120621"; transcript_id "MSTRG.120621.1"; exon_number "1"; scaffold_70156 StringTie exon 214 423 1000 . . gene_id "MSTRG.120644"; transcript_id "MSTRG.120644.1"; exon_number "1"; scaffold_7017 StringTie exon 23363 23616 1000 . . gene_id "MSTRG.120651"; transcript_id "MSTRG.120651.1"; exon_number "1"; scaffold_70186 StringTie exon 1571 1943 1000 . . gene_id "MSTRG.120657"; transcript_id "MSTRG.120657.1"; exon_number "1"; scaffold_7019 StringTie exon 22404 22814 1000 . . gene_id "MSTRG.120660"; transcript_id "MSTRG.120660.1"; exon_number "1"; scaffold_702 StringTie exon 181655 181915 1000 . . gene_id "MSTRG.120675"; transcript_id "MSTRG.120675.1"; exon_number "1"; scaffold_702 StringTie exon 198969 199198 1000 . . gene_id "MSTRG.120679"; transcript_id "MSTRG.120679.1"; exon_number "1"; scaffold_70241 StringTie exon 399 1036 1000 + . gene_id "MSTRG.120741"; transcript_id "MSTRG.120741.1"; exon_number "1"; scaffold_70241 StringTie exon 1229 2040 1000 + . gene_id "MSTRG.120741"; transcript_id "MSTRG.120741.1"; exon_number "2"; scaffold_703 StringTie exon 795 1058 1000 . . gene_id "MSTRG.120759"; transcript_id "MSTRG.120759.1"; exon_number "1"; scaffold_703 StringTie exon 493149 495270 1000 . . gene_id "MSTRG.120798"; transcript_id "MSTRG.120798.1"; exon_number "1"; scaffold_703 StringTie exon 497955 498447 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "1"; scaffold_703 StringTie exon 507719 507868 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "2"; scaffold_703 StringTie exon 510307 510643 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "3"; scaffold_703 StringTie exon 510748 510829 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "4"; scaffold_703 StringTie exon 511057 511157 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "5"; scaffold_703 StringTie exon 512018 512169 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "6"; scaffold_703 StringTie exon 512414 512572 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "7"; scaffold_703 StringTie exon 512805 512897 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "8"; scaffold_703 StringTie exon 513028 513087 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "9"; scaffold_703 StringTie exon 513204 513233 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "10"; scaffold_703 StringTie exon 513355 513448 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "11"; scaffold_703 StringTie exon 513540 513587 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "12"; scaffold_703 StringTie exon 513740 513823 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "13"; scaffold_703 StringTie exon 514897 514995 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "14"; scaffold_703 StringTie exon 515177 515312 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "15"; scaffold_703 StringTie exon 515498 515550 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "16"; scaffold_703 StringTie exon 515653 515747 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "17"; scaffold_703 StringTie exon 516017 516156 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "18"; scaffold_703 StringTie exon 516324 516542 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "19"; scaffold_703 StringTie exon 516724 516766 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "20"; scaffold_703 StringTie exon 518901 518998 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "21"; scaffold_703 StringTie exon 519303 519413 1000 + . gene_id "MSTRG.120801"; transcript_id "MSTRG.120801.1"; exon_number "22"; scaffold_70325 StringTie exon 1787 2135 1000 . . gene_id "MSTRG.120812"; transcript_id "MSTRG.120812.1"; exon_number "1"; scaffold_704 StringTie exon 91051 94084 1000 - . gene_id "MSTRG.120852"; transcript_id "MSTRG.120852.1"; exon_number "1"; scaffold_704 StringTie exon 94228 94297 1000 - . gene_id "MSTRG.120852"; transcript_id "MSTRG.120852.1"; exon_number "2"; scaffold_704 StringTie exon 94453 94653 1000 - . gene_id "MSTRG.120852"; transcript_id "MSTRG.120852.1"; exon_number "3"; scaffold_704 StringTie exon 94810 94898 1000 - . gene_id "MSTRG.120852"; transcript_id "MSTRG.120852.1"; exon_number "4"; scaffold_704 StringTie exon 94990 95685 1000 - . gene_id "MSTRG.120852"; transcript_id "MSTRG.120852.1"; exon_number "5"; scaffold_704 StringTie exon 95812 96046 1000 - . gene_id "MSTRG.120852"; transcript_id "MSTRG.120852.1"; exon_number "6"; scaffold_704 StringTie exon 97827 98020 1000 - . gene_id "MSTRG.120852"; transcript_id "MSTRG.120852.1"; exon_number "7"; scaffold_704 StringTie exon 345424 345691 1000 . . gene_id "MSTRG.120870"; transcript_id "MSTRG.120870.1"; exon_number "1"; scaffold_7040 StringTie exon 8416 8430 1000 - . gene_id "MSTRG.120887"; transcript_id "MSTRG.120887.1"; exon_number "1"; scaffold_7040 StringTie exon 8666 8824 1000 - . gene_id "MSTRG.120887"; transcript_id "MSTRG.120887.1"; exon_number "2"; scaffold_7040 StringTie exon 16024 16198 1000 - . gene_id "MSTRG.120887"; transcript_id "MSTRG.120887.1"; exon_number "3"; scaffold_7048 StringTie exon 11707 11739 1000 - . gene_id "MSTRG.120926"; transcript_id "MSTRG.120926.1"; exon_number "1"; scaffold_7048 StringTie exon 12012 12196 1000 - . gene_id "MSTRG.120926"; transcript_id "MSTRG.120926.1"; exon_number "2"; scaffold_7048 StringTie exon 12284 12489 1000 - . gene_id "MSTRG.120926"; transcript_id "MSTRG.120926.1"; exon_number "3"; scaffold_7048 StringTie exon 12966 13071 1000 - . gene_id "MSTRG.120926"; transcript_id "MSTRG.120926.1"; exon_number "4"; scaffold_7048 StringTie exon 13290 13413 1000 - . gene_id "MSTRG.120926"; transcript_id "MSTRG.120926.1"; exon_number "5"; scaffold_7048 StringTie exon 13612 14547 1000 - . gene_id "MSTRG.120926"; transcript_id "MSTRG.120926.1"; exon_number "6"; scaffold_705 StringTie exon 35231 35874 1000 . . gene_id "MSTRG.120939"; transcript_id "MSTRG.120939.1"; exon_number "1"; scaffold_705 StringTie exon 62734 63027 1000 . . gene_id "MSTRG.120942"; transcript_id "MSTRG.120942.1"; exon_number "1"; scaffold_705 StringTie exon 511019 511354 1000 . . gene_id "MSTRG.120970"; transcript_id "MSTRG.120970.1"; exon_number "1"; scaffold_7050 StringTie exon 25424 25625 1000 . . gene_id "MSTRG.120975"; transcript_id "MSTRG.120975.1"; exon_number "1"; scaffold_7054 StringTie exon 7526 7948 1000 . . gene_id "MSTRG.120996"; transcript_id "MSTRG.120996.1"; exon_number "1"; scaffold_7054 StringTie exon 17337 17436 1000 + . gene_id "MSTRG.120997"; transcript_id "MSTRG.120997.1"; exon_number "1"; scaffold_7054 StringTie exon 18970 19104 1000 + . gene_id "MSTRG.120997"; transcript_id "MSTRG.120997.1"; exon_number "2"; scaffold_7054 StringTie exon 22474 22706 1000 . . gene_id "MSTRG.120998"; transcript_id "MSTRG.120998.1"; exon_number "1"; scaffold_7056 StringTie exon 27344 27545 1000 . . gene_id "MSTRG.121011"; transcript_id "MSTRG.121011.1"; exon_number "1"; scaffold_706 StringTie exon 363357 363581 1000 . . gene_id "MSTRG.121045"; transcript_id "MSTRG.121045.1"; exon_number "1"; scaffold_706 StringTie exon 542946 543216 1000 . . gene_id "MSTRG.121055"; transcript_id "MSTRG.121055.1"; exon_number "1"; scaffold_7063 StringTie exon 21403 21905 1000 . . gene_id "MSTRG.121071"; transcript_id "MSTRG.121071.1"; exon_number "1"; scaffold_70680 StringTie exon 1777 2149 1000 . . gene_id "MSTRG.121099"; transcript_id "MSTRG.121099.1"; exon_number "1"; scaffold_7069 StringTie exon 53 368 1000 . . gene_id "MSTRG.121104"; transcript_id "MSTRG.121104.1"; exon_number "1"; scaffold_707 StringTie exon 61964 62196 1000 . . gene_id "MSTRG.121118"; transcript_id "MSTRG.121118.1"; exon_number "1"; scaffold_707 StringTie exon 428182 428432 1000 . . gene_id "MSTRG.121158"; transcript_id "MSTRG.121158.1"; exon_number "1"; scaffold_70716 StringTie exon 961 1295 1000 . . gene_id "MSTRG.121178"; transcript_id "MSTRG.121178.1"; exon_number "1"; scaffold_70728 StringTie exon 351 618 1000 . . gene_id "MSTRG.121190"; transcript_id "MSTRG.121190.1"; exon_number "1"; scaffold_7075 StringTie exon 18510 18863 1000 + . gene_id "MSTRG.121199"; transcript_id "MSTRG.121199.1"; exon_number "1"; scaffold_7075 StringTie exon 19642 19710 1000 + . gene_id "MSTRG.121199"; transcript_id "MSTRG.121199.1"; exon_number "2"; scaffold_7075 StringTie exon 26391 26616 1000 + . gene_id "MSTRG.121199"; transcript_id "MSTRG.121199.1"; exon_number "3"; scaffold_7077 StringTie exon 15751 16332 1000 . . gene_id "MSTRG.121204"; transcript_id "MSTRG.121204.1"; exon_number "1"; scaffold_708 StringTie exon 533 801 1000 . . gene_id "MSTRG.121216"; transcript_id "MSTRG.121216.1"; exon_number "1"; scaffold_708 StringTie exon 3899 4058 1000 - . gene_id "MSTRG.121218"; transcript_id "MSTRG.121218.1"; exon_number "1"; scaffold_708 StringTie exon 4207 4409 1000 - . gene_id "MSTRG.121218"; transcript_id "MSTRG.121218.1"; exon_number "2"; scaffold_709 StringTie exon 33635 33874 1000 + . gene_id "MSTRG.121288"; transcript_id "MSTRG.121288.1"; exon_number "1"; scaffold_709 StringTie exon 34538 34790 1000 . . gene_id "MSTRG.121289"; transcript_id "MSTRG.121289.1"; exon_number "1"; scaffold_709 StringTie exon 284268 284560 1000 . . gene_id "MSTRG.121304"; transcript_id "MSTRG.121304.1"; exon_number "1"; scaffold_709 StringTie exon 343153 343486 1000 . . gene_id "MSTRG.121306"; transcript_id "MSTRG.121306.1"; exon_number "1"; scaffold_709 StringTie exon 483365 483664 1000 . . gene_id "MSTRG.121315"; transcript_id "MSTRG.121315.1"; exon_number "1"; scaffold_7090 StringTie exon 11650 12145 1000 . . gene_id "MSTRG.121320"; transcript_id "MSTRG.121320.1"; exon_number "1"; scaffold_70977 StringTie exon 55 339 1000 . . gene_id "MSTRG.121361"; transcript_id "MSTRG.121361.1"; exon_number "1"; scaffold_71 StringTie exon 102576 103332 1000 . . gene_id "MSTRG.121372"; transcript_id "MSTRG.121372.1"; exon_number "1"; scaffold_71 StringTie exon 1002579 1002795 1000 . . gene_id "MSTRG.121406"; transcript_id "MSTRG.121406.1"; exon_number "1"; scaffold_71 StringTie exon 1012583 1012800 1000 . . gene_id "MSTRG.121407"; transcript_id "MSTRG.121407.1"; exon_number "1"; scaffold_71 StringTie exon 1414963 1415187 1000 . . gene_id "MSTRG.121429"; transcript_id "MSTRG.121429.1"; exon_number "1"; scaffold_71 StringTie exon 1824038 1824697 1000 . . gene_id "MSTRG.121451"; transcript_id "MSTRG.121451.1"; exon_number "1"; scaffold_710 StringTie exon 23595 23887 1000 . . gene_id "MSTRG.121464"; transcript_id "MSTRG.121464.1"; exon_number "1"; scaffold_710 StringTie exon 38583 38620 1000 + . gene_id "MSTRG.121469"; transcript_id "MSTRG.121469.1"; exon_number "1"; scaffold_710 StringTie exon 38989 39058 1000 + . gene_id "MSTRG.121469"; transcript_id "MSTRG.121469.1"; exon_number "2"; scaffold_710 StringTie exon 39236 39861 1000 + . gene_id "MSTRG.121469"; transcript_id "MSTRG.121469.1"; exon_number "3"; scaffold_710 StringTie exon 132105 132356 1000 . . gene_id "MSTRG.121488"; transcript_id "MSTRG.121488.1"; exon_number "1"; scaffold_710 StringTie exon 146868 146955 1000 + . gene_id "MSTRG.121491"; transcript_id "MSTRG.121491.1"; exon_number "1"; scaffold_710 StringTie exon 147079 147192 1000 + . gene_id "MSTRG.121491"; transcript_id "MSTRG.121491.1"; exon_number "2"; scaffold_710 StringTie exon 354940 355187 1000 . . gene_id "MSTRG.121505"; transcript_id "MSTRG.121505.1"; exon_number "1"; scaffold_710 StringTie exon 449593 449669 1000 + . gene_id "MSTRG.121515"; transcript_id "MSTRG.121515.1"; exon_number "1"; scaffold_710 StringTie exon 449974 450066 1000 + . gene_id "MSTRG.121515"; transcript_id "MSTRG.121515.1"; exon_number "2"; scaffold_710 StringTie exon 450157 450228 1000 + . gene_id "MSTRG.121515"; transcript_id "MSTRG.121515.1"; exon_number "3"; scaffold_710 StringTie exon 450343 450363 1000 + . gene_id "MSTRG.121515"; transcript_id "MSTRG.121515.1"; exon_number "4"; scaffold_710 StringTie exon 465677 466424 1000 . . gene_id "MSTRG.121517"; transcript_id "MSTRG.121517.1"; exon_number "1"; scaffold_71009 StringTie exon 1349 1703 1000 . . gene_id "MSTRG.121531"; transcript_id "MSTRG.121531.1"; exon_number "1"; scaffold_711 StringTie exon 191900 192325 1000 . . gene_id "MSTRG.121589"; transcript_id "MSTRG.121589.1"; exon_number "1"; scaffold_711 StringTie exon 251027 251289 1000 . . gene_id "MSTRG.121594"; transcript_id "MSTRG.121594.1"; exon_number "1"; scaffold_711 StringTie exon 353649 354060 1000 . . gene_id "MSTRG.121599"; transcript_id "MSTRG.121599.1"; exon_number "1"; scaffold_711 StringTie exon 357938 357956 1000 - . gene_id "MSTRG.121600"; transcript_id "MSTRG.121600.2"; exon_number "1"; scaffold_711 StringTie exon 358216 358321 1000 - . gene_id "MSTRG.121600"; transcript_id "MSTRG.121600.2"; exon_number "2"; scaffold_711 StringTie exon 358504 358560 1000 - . gene_id "MSTRG.121600"; transcript_id "MSTRG.121600.2"; exon_number "3"; scaffold_711 StringTie exon 358695 358775 1000 - . gene_id "MSTRG.121600"; transcript_id "MSTRG.121600.2"; exon_number "4"; scaffold_711 StringTie exon 358915 359105 1000 - . gene_id "MSTRG.121600"; transcript_id "MSTRG.121600.2"; exon_number "5"; scaffold_711 StringTie exon 359225 359324 1000 - . gene_id "MSTRG.121600"; transcript_id "MSTRG.121600.2"; exon_number "6"; scaffold_711 StringTie exon 366625 366838 1000 - . gene_id "MSTRG.121600"; transcript_id "MSTRG.121600.2"; exon_number "7"; scaffold_71142 StringTie exon 893 1163 1000 . . gene_id "MSTRG.121630"; transcript_id "MSTRG.121630.1"; exon_number "1"; scaffold_712 StringTie exon 40579 40814 1000 . . gene_id "MSTRG.121657"; transcript_id "MSTRG.121657.1"; exon_number "1"; scaffold_712 StringTie exon 292556 292791 1000 . . gene_id "MSTRG.121680"; transcript_id "MSTRG.121680.1"; exon_number "1"; scaffold_712 StringTie exon 446989 447140 1000 - . gene_id "MSTRG.121691"; transcript_id "MSTRG.121691.1"; exon_number "1"; scaffold_712 StringTie exon 457251 457372 1000 - . gene_id "MSTRG.121691"; transcript_id "MSTRG.121691.1"; exon_number "2"; scaffold_712 StringTie exon 457634 457722 1000 - . gene_id "MSTRG.121691"; transcript_id "MSTRG.121691.1"; exon_number "3"; scaffold_712 StringTie exon 457819 457837 1000 - . gene_id "MSTRG.121691"; transcript_id "MSTRG.121691.1"; exon_number "4"; scaffold_712 StringTie exon 458238 458292 1000 - . gene_id "MSTRG.121691"; transcript_id "MSTRG.121691.1"; exon_number "5"; scaffold_7121 StringTie exon 17390 17614 1000 . . gene_id "MSTRG.121709"; transcript_id "MSTRG.121709.1"; exon_number "1"; scaffold_71247 StringTie exon 557 598 1000 + . gene_id "MSTRG.121725"; transcript_id "MSTRG.121725.1"; exon_number "1"; scaffold_71247 StringTie exon 772 914 1000 + . gene_id "MSTRG.121725"; transcript_id "MSTRG.121725.1"; exon_number "2"; scaffold_71247 StringTie exon 1186 1352 1000 + . gene_id "MSTRG.121725"; transcript_id "MSTRG.121725.1"; exon_number "3"; scaffold_71247 StringTie exon 1543 1673 1000 + . gene_id "MSTRG.121725"; transcript_id "MSTRG.121725.1"; exon_number "4"; scaffold_71247 StringTie exon 1940 2086 1000 + . gene_id "MSTRG.121725"; transcript_id "MSTRG.121725.1"; exon_number "5"; scaffold_7125 StringTie exon 3122 3372 1000 . . gene_id "MSTRG.121727"; transcript_id "MSTRG.121727.1"; exon_number "1"; scaffold_7126 StringTie exon 16401 16732 1000 + . gene_id "MSTRG.121734"; transcript_id "MSTRG.121734.1"; exon_number "1"; scaffold_713 StringTie exon 160168 160390 1000 . . gene_id "MSTRG.121768"; transcript_id "MSTRG.121768.1"; exon_number "1"; scaffold_713 StringTie exon 192953 193135 1000 - . gene_id "MSTRG.121769"; transcript_id "MSTRG.121769.1"; exon_number "1"; scaffold_713 StringTie exon 196156 196245 1000 - . gene_id "MSTRG.121769"; transcript_id "MSTRG.121769.1"; exon_number "2"; scaffold_713 StringTie exon 322409 323065 1000 . . gene_id "MSTRG.121779"; transcript_id "MSTRG.121779.1"; exon_number "1"; scaffold_71377 StringTie exon 612 830 1000 . . gene_id "MSTRG.121829"; transcript_id "MSTRG.121829.1"; exon_number "1"; scaffold_714 StringTie exon 308019 308189 1000 - . gene_id "MSTRG.121852"; transcript_id "MSTRG.121852.1"; exon_number "1"; scaffold_714 StringTie exon 312696 312734 1000 - . gene_id "MSTRG.121852"; transcript_id "MSTRG.121852.1"; exon_number "2"; scaffold_7140 StringTie exon 6423 6663 1000 . . gene_id "MSTRG.121876"; transcript_id "MSTRG.121876.1"; exon_number "1"; scaffold_71422 StringTie exon 1904 2141 1000 . . gene_id "MSTRG.121891"; transcript_id "MSTRG.121891.1"; exon_number "1"; scaffold_71430 StringTie exon 1707 1999 1000 . . gene_id "MSTRG.121897"; transcript_id "MSTRG.121897.1"; exon_number "1"; scaffold_71432 StringTie exon 1459 1694 1000 . . gene_id "MSTRG.121898"; transcript_id "MSTRG.121898.1"; exon_number "1"; scaffold_7144 StringTie exon 43 295 1000 . . gene_id "MSTRG.121901"; transcript_id "MSTRG.121901.1"; exon_number "1"; scaffold_7144 StringTie exon 17743 17910 1000 + . gene_id "MSTRG.121904"; transcript_id "MSTRG.121904.1"; exon_number "1"; scaffold_7144 StringTie exon 18067 18174 1000 + . gene_id "MSTRG.121904"; transcript_id "MSTRG.121904.1"; exon_number "2"; scaffold_7144 StringTie exon 18280 18396 1000 + . gene_id "MSTRG.121904"; transcript_id "MSTRG.121904.1"; exon_number "3"; scaffold_7144 StringTie exon 18565 18694 1000 + . gene_id "MSTRG.121904"; transcript_id "MSTRG.121904.1"; exon_number "4"; scaffold_7144 StringTie exon 18880 18933 1000 + . gene_id "MSTRG.121904"; transcript_id "MSTRG.121904.1"; exon_number "5"; scaffold_7144 StringTie exon 21984 22476 1000 . . gene_id "MSTRG.121906"; transcript_id "MSTRG.121906.1"; exon_number "1"; scaffold_7144 StringTie exon 26224 26522 1000 . . gene_id "MSTRG.121907"; transcript_id "MSTRG.121907.1"; exon_number "1"; scaffold_715 StringTie exon 91354 91390 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "1"; scaffold_715 StringTie exon 99454 99696 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "2"; scaffold_715 StringTie exon 100394 100465 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "3"; scaffold_715 StringTie exon 100895 100994 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "4"; scaffold_715 StringTie exon 101624 101697 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "5"; scaffold_715 StringTie exon 125898 126036 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "6"; scaffold_715 StringTie exon 126511 126587 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "7"; scaffold_715 StringTie exon 137670 137874 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "8"; scaffold_715 StringTie exon 138070 138234 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "9"; scaffold_715 StringTie exon 138536 138694 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "10"; scaffold_715 StringTie exon 138869 139073 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "11"; scaffold_715 StringTie exon 141391 141536 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "12"; scaffold_715 StringTie exon 148856 148966 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "13"; scaffold_715 StringTie exon 149492 149587 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "14"; scaffold_715 StringTie exon 164934 165019 1000 + . gene_id "MSTRG.121931"; transcript_id "MSTRG.121931.4"; exon_number "15"; scaffold_715 StringTie exon 390346 390432 1000 - . gene_id "MSTRG.121958"; transcript_id "MSTRG.121958.2"; exon_number "1"; scaffold_715 StringTie exon 390814 390969 1000 - . gene_id "MSTRG.121958"; transcript_id "MSTRG.121958.2"; exon_number "2"; scaffold_7154 StringTie exon 6595 6846 1000 . . gene_id "MSTRG.121987"; transcript_id "MSTRG.121987.1"; exon_number "1"; scaffold_71571 StringTie exon 1388 1952 1000 . . gene_id "MSTRG.122002"; transcript_id "MSTRG.122002.1"; exon_number "1"; scaffold_7159 StringTie exon 16834 17391 1000 . . gene_id "MSTRG.122007"; transcript_id "MSTRG.122007.1"; exon_number "1"; scaffold_716 StringTie exon 463631 463853 1000 . . gene_id "MSTRG.122033"; transcript_id "MSTRG.122033.1"; exon_number "1"; scaffold_7160 StringTie exon 20150 20499 1000 . . gene_id "MSTRG.122039"; transcript_id "MSTRG.122039.1"; exon_number "1"; scaffold_7161 StringTie exon 4497 4709 1000 . . gene_id "MSTRG.122043"; transcript_id "MSTRG.122043.1"; exon_number "1"; scaffold_7164 StringTie exon 19553 19848 1000 + . gene_id "MSTRG.122066"; transcript_id "MSTRG.122066.1"; exon_number "1"; scaffold_7164 StringTie exon 19944 20081 1000 + . gene_id "MSTRG.122066"; transcript_id "MSTRG.122066.1"; exon_number "2"; scaffold_7164 StringTie exon 28685 28832 1000 + . gene_id "MSTRG.122066"; transcript_id "MSTRG.122066.1"; exon_number "3"; scaffold_7164 StringTie exon 29140 29258 1000 + . gene_id "MSTRG.122066"; transcript_id "MSTRG.122066.1"; exon_number "4"; scaffold_71646 StringTie exon 1427 1831 1000 . . gene_id "MSTRG.122069"; transcript_id "MSTRG.122069.1"; exon_number "1"; scaffold_71662 StringTie exon 219 474 1000 . . gene_id "MSTRG.122084"; transcript_id "MSTRG.122084.1"; exon_number "1"; scaffold_71676 StringTie exon 850 1085 1000 . . gene_id "MSTRG.122089"; transcript_id "MSTRG.122089.1"; exon_number "1"; scaffold_717 StringTie exon 306872 307262 1000 . . gene_id "MSTRG.122122"; transcript_id "MSTRG.122122.1"; exon_number "1"; scaffold_718 StringTie exon 204519 204818 1000 . . gene_id "MSTRG.122203"; transcript_id "MSTRG.122203.1"; exon_number "1"; scaffold_718 StringTie exon 236068 236451 1000 . . gene_id "MSTRG.122204"; transcript_id "MSTRG.122204.1"; exon_number "1"; scaffold_718 StringTie exon 385757 386075 1000 . . gene_id "MSTRG.122225"; transcript_id "MSTRG.122225.1"; exon_number "1"; scaffold_71817 StringTie exon 247 484 1000 . . gene_id "MSTRG.122245"; transcript_id "MSTRG.122245.1"; exon_number "1"; scaffold_71826 StringTie exon 1135 1456 1000 . . gene_id "MSTRG.122250"; transcript_id "MSTRG.122250.1"; exon_number "1"; scaffold_7186 StringTie exon 16990 17224 1000 . . gene_id "MSTRG.122269"; transcript_id "MSTRG.122269.1"; exon_number "1"; scaffold_71889 StringTie exon 2 222 1000 . . gene_id "MSTRG.122284"; transcript_id "MSTRG.122284.1"; exon_number "1"; scaffold_719 StringTie exon 113021 113244 1000 . . gene_id "MSTRG.122298"; transcript_id "MSTRG.122298.1"; exon_number "1"; scaffold_719 StringTie exon 192993 193256 1000 . . gene_id "MSTRG.122300"; transcript_id "MSTRG.122300.1"; exon_number "1"; scaffold_719 StringTie exon 249990 250189 1000 . . gene_id "MSTRG.122304"; transcript_id "MSTRG.122304.1"; exon_number "1"; scaffold_719 StringTie exon 274937 275199 1000 . . gene_id "MSTRG.122306"; transcript_id "MSTRG.122306.1"; exon_number "1"; scaffold_719 StringTie exon 458745 459009 1000 . . gene_id "MSTRG.122309"; transcript_id "MSTRG.122309.1"; exon_number "1"; scaffold_71907 StringTie exon 1207 1575 1000 . . gene_id "MSTRG.122316"; transcript_id "MSTRG.122316.1"; exon_number "1"; scaffold_71943 StringTie exon 754 1124 1000 + . gene_id "MSTRG.122335"; transcript_id "MSTRG.122335.1"; exon_number "1"; scaffold_7197 StringTie exon 2362 2604 1000 . . gene_id "MSTRG.122343"; transcript_id "MSTRG.122343.1"; exon_number "1"; scaffold_7198 StringTie exon 5665 6586 1000 + . gene_id "MSTRG.122348"; transcript_id "MSTRG.122348.1"; exon_number "1"; scaffold_72 StringTie exon 20366 20639 1000 . . gene_id "MSTRG.122364"; transcript_id "MSTRG.122364.1"; exon_number "1"; scaffold_72 StringTie exon 163977 164216 1000 . . gene_id "MSTRG.122387"; transcript_id "MSTRG.122387.1"; exon_number "1"; scaffold_72 StringTie exon 708951 709179 1000 - . gene_id "MSTRG.122435"; transcript_id "MSTRG.122435.1"; exon_number "1"; scaffold_72 StringTie exon 709354 709403 1000 - . gene_id "MSTRG.122435"; transcript_id "MSTRG.122435.1"; exon_number "2"; scaffold_72 StringTie exon 764395 765676 1000 . . gene_id "MSTRG.122442"; transcript_id "MSTRG.122442.1"; exon_number "1"; scaffold_72 StringTie exon 778919 778985 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "1"; scaffold_72 StringTie exon 779495 779575 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "2"; scaffold_72 StringTie exon 779766 779891 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "3"; scaffold_72 StringTie exon 780091 780195 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "4"; scaffold_72 StringTie exon 781218 781280 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "5"; scaffold_72 StringTie exon 781404 781541 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "6"; scaffold_72 StringTie exon 781639 781782 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "7"; scaffold_72 StringTie exon 781924 782072 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "8"; scaffold_72 StringTie exon 782205 782301 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "9"; scaffold_72 StringTie exon 787259 787404 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "10"; scaffold_72 StringTie exon 787505 787586 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "11"; scaffold_72 StringTie exon 787749 788140 1000 + . gene_id "MSTRG.122444"; transcript_id "MSTRG.122444.1"; exon_number "12"; scaffold_72 StringTie exon 788139 788709 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "1"; scaffold_72 StringTie exon 788830 788905 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "2"; scaffold_72 StringTie exon 790304 790371 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "3"; scaffold_72 StringTie exon 790657 790704 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "4"; scaffold_72 StringTie exon 791248 791341 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "5"; scaffold_72 StringTie exon 791605 791664 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "6"; scaffold_72 StringTie exon 791757 791808 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "7"; scaffold_72 StringTie exon 791938 791995 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "8"; scaffold_72 StringTie exon 792370 792426 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "9"; scaffold_72 StringTie exon 792552 792578 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "10"; scaffold_72 StringTie exon 792908 793014 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "11"; scaffold_72 StringTie exon 802335 802419 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "12"; scaffold_72 StringTie exon 803404 803510 1000 - . gene_id "MSTRG.122445"; transcript_id "MSTRG.122445.1"; exon_number "13"; scaffold_72 StringTie exon 819905 820522 1000 . . gene_id "MSTRG.122447"; transcript_id "MSTRG.122447.1"; exon_number "1"; scaffold_72 StringTie exon 888438 889908 1000 - . gene_id "MSTRG.122456"; transcript_id "MSTRG.122456.1"; exon_number "1"; scaffold_72 StringTie exon 890071 890176 1000 - . gene_id "MSTRG.122456"; transcript_id "MSTRG.122456.1"; exon_number "2"; scaffold_72 StringTie exon 895272 895383 1000 - . gene_id "MSTRG.122456"; transcript_id "MSTRG.122456.1"; exon_number "3"; scaffold_72 StringTie exon 898717 898750 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "1"; scaffold_72 StringTie exon 899102 899159 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "2"; scaffold_72 StringTie exon 899356 899467 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "3"; scaffold_72 StringTie exon 899734 899935 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "4"; scaffold_72 StringTie exon 900810 900884 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "5"; scaffold_72 StringTie exon 901985 902056 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "6"; scaffold_72 StringTie exon 903521 903603 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "7"; scaffold_72 StringTie exon 905432 905592 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "8"; scaffold_72 StringTie exon 908644 908865 1000 - . gene_id "MSTRG.122457"; transcript_id "MSTRG.122457.1"; exon_number "9"; scaffold_72 StringTie exon 957830 958055 1000 . . gene_id "MSTRG.122461"; transcript_id "MSTRG.122461.1"; exon_number "1"; scaffold_72 StringTie exon 968663 968933 1000 + . gene_id "MSTRG.122462"; transcript_id "MSTRG.122462.1"; exon_number "1"; scaffold_72 StringTie exon 969761 969894 1000 + . gene_id "MSTRG.122462"; transcript_id "MSTRG.122462.1"; exon_number "2"; scaffold_72 StringTie exon 1085412 1085704 1000 . . gene_id "MSTRG.122470"; transcript_id "MSTRG.122470.1"; exon_number "1"; scaffold_72 StringTie exon 1376778 1377056 1000 . . gene_id "MSTRG.122495"; transcript_id "MSTRG.122495.1"; exon_number "1"; scaffold_720 StringTie exon 268146 268439 1000 . . gene_id "MSTRG.122527"; transcript_id "MSTRG.122527.1"; exon_number "1"; scaffold_7206 StringTie exon 10142 10402 1000 . . gene_id "MSTRG.122569"; transcript_id "MSTRG.122569.1"; exon_number "1"; scaffold_72087 StringTie exon 881 1106 1000 . . gene_id "MSTRG.122592"; transcript_id "MSTRG.122592.1"; exon_number "1"; scaffold_7209 StringTie exon 23560 23784 1000 + . gene_id "MSTRG.122597"; transcript_id "MSTRG.122597.1"; exon_number "1"; scaffold_7209 StringTie exon 28616 28734 1000 + . gene_id "MSTRG.122597"; transcript_id "MSTRG.122597.1"; exon_number "2"; scaffold_7209 StringTie exon 28921 29029 1000 + . gene_id "MSTRG.122597"; transcript_id "MSTRG.122597.1"; exon_number "3"; scaffold_7209 StringTie exon 29152 29210 1000 + . gene_id "MSTRG.122597"; transcript_id "MSTRG.122597.1"; exon_number "4"; scaffold_7209 StringTie exon 29322 29462 1000 + . gene_id "MSTRG.122597"; transcript_id "MSTRG.122597.1"; exon_number "5"; scaffold_721 StringTie exon 195064 195272 1000 . . gene_id "MSTRG.122611"; transcript_id "MSTRG.122611.1"; exon_number "1"; scaffold_721 StringTie exon 228060 228363 1000 . . gene_id "MSTRG.122613"; transcript_id "MSTRG.122613.1"; exon_number "1"; scaffold_72124 StringTie exon 1471 1722 1000 . . gene_id "MSTRG.122642"; transcript_id "MSTRG.122642.1"; exon_number "1"; scaffold_72161 StringTie exon 1662 1887 1000 . . gene_id "MSTRG.122662"; transcript_id "MSTRG.122662.1"; exon_number "1"; scaffold_7218 StringTie exon 19705 19974 1000 . . gene_id "MSTRG.122675"; transcript_id "MSTRG.122675.1"; exon_number "1"; scaffold_722 StringTie exon 394186 394408 1000 . . gene_id "MSTRG.122726"; transcript_id "MSTRG.122726.1"; exon_number "1"; scaffold_722 StringTie exon 518010 518446 1000 . . gene_id "MSTRG.122731"; transcript_id "MSTRG.122731.1"; exon_number "1"; scaffold_72210 StringTie exon 376 594 1000 . . gene_id "MSTRG.122745"; transcript_id "MSTRG.122745.1"; exon_number "1"; scaffold_72221 StringTie exon 42 268 1000 . . gene_id "MSTRG.122751"; transcript_id "MSTRG.122751.1"; exon_number "1"; scaffold_7223 StringTie exon 4619 4693 1000 + . gene_id "MSTRG.122753"; transcript_id "MSTRG.122753.1"; exon_number "1"; scaffold_7223 StringTie exon 10709 10810 1000 + . gene_id "MSTRG.122753"; transcript_id "MSTRG.122753.1"; exon_number "2"; scaffold_7223 StringTie exon 11135 11367 1000 + . gene_id "MSTRG.122753"; transcript_id "MSTRG.122753.1"; exon_number "3"; scaffold_72242 StringTie exon 1540 1770 1000 . . gene_id "MSTRG.122759"; transcript_id "MSTRG.122759.1"; exon_number "1"; scaffold_723 StringTie exon 315437 315549 1000 + . gene_id "MSTRG.122801"; transcript_id "MSTRG.122801.1"; exon_number "1"; scaffold_723 StringTie exon 354292 354375 1000 + . gene_id "MSTRG.122801"; transcript_id "MSTRG.122801.1"; exon_number "2"; scaffold_723 StringTie exon 356714 356754 1000 + . gene_id "MSTRG.122801"; transcript_id "MSTRG.122801.1"; exon_number "3"; scaffold_723 StringTie exon 357061 357116 1000 + . gene_id "MSTRG.122801"; transcript_id "MSTRG.122801.1"; exon_number "4"; scaffold_723 StringTie exon 357451 357513 1000 + . gene_id "MSTRG.122801"; transcript_id "MSTRG.122801.1"; exon_number "5"; scaffold_723 StringTie exon 492870 493131 1000 . . gene_id "MSTRG.122808"; transcript_id "MSTRG.122808.1"; exon_number "1"; scaffold_723 StringTie exon 509790 509998 1000 . . gene_id "MSTRG.122810"; transcript_id "MSTRG.122810.1"; exon_number "1"; scaffold_72306 StringTie exon 1 673 1000 . . gene_id "MSTRG.122815"; transcript_id "MSTRG.122815.1"; exon_number "1"; scaffold_7233 StringTie exon 12153 12459 1000 . . gene_id "MSTRG.122830"; transcript_id "MSTRG.122830.1"; exon_number "1"; scaffold_72356 StringTie exon 429 743 1000 . . gene_id "MSTRG.122846"; transcript_id "MSTRG.122846.1"; exon_number "1"; scaffold_7237 StringTie exon 85 628 1000 . . gene_id "MSTRG.122851"; transcript_id "MSTRG.122851.1"; exon_number "1"; scaffold_724 StringTie exon 281747 282640 1000 . . gene_id "MSTRG.122883"; transcript_id "MSTRG.122883.1"; exon_number "1"; scaffold_72404 StringTie exon 1902 2137 1000 . . gene_id "MSTRG.122912"; transcript_id "MSTRG.122912.1"; exon_number "1"; scaffold_7241 StringTie exon 8514 8751 1000 . . gene_id "MSTRG.122913"; transcript_id "MSTRG.122913.1"; exon_number "1"; scaffold_72413 StringTie exon 118 169 1000 + . gene_id "MSTRG.122917"; transcript_id "MSTRG.122917.2"; exon_number "1"; scaffold_72413 StringTie exon 1674 1860 1000 + . gene_id "MSTRG.122917"; transcript_id "MSTRG.122917.2"; exon_number "2"; scaffold_7243 StringTie exon 6474 6719 1000 . . gene_id "MSTRG.122924"; transcript_id "MSTRG.122924.1"; exon_number "1"; scaffold_72434 StringTie exon 1264 1485 1000 . . gene_id "MSTRG.122925"; transcript_id "MSTRG.122925.1"; exon_number "1"; scaffold_72465 StringTie exon 1192 1430 1000 . . gene_id "MSTRG.122940"; transcript_id "MSTRG.122940.1"; exon_number "1"; scaffold_725 StringTie exon 29281 29497 1000 . . gene_id "MSTRG.122954"; transcript_id "MSTRG.122954.1"; exon_number "1"; scaffold_725 StringTie exon 89734 89944 1000 . . gene_id "MSTRG.122962"; transcript_id "MSTRG.122962.1"; exon_number "1"; scaffold_725 StringTie exon 185242 185474 1000 . . gene_id "MSTRG.122966"; transcript_id "MSTRG.122966.1"; exon_number "1"; scaffold_725 StringTie exon 241105 241167 1000 + . gene_id "MSTRG.122972"; transcript_id "MSTRG.122972.1"; exon_number "1"; scaffold_725 StringTie exon 241364 241478 1000 + . gene_id "MSTRG.122972"; transcript_id "MSTRG.122972.1"; exon_number "2"; scaffold_725 StringTie exon 242593 242775 1000 + . gene_id "MSTRG.122972"; transcript_id "MSTRG.122972.1"; exon_number "3"; scaffold_725 StringTie exon 243092 243295 1000 + . gene_id "MSTRG.122972"; transcript_id "MSTRG.122972.1"; exon_number "4"; scaffold_725 StringTie exon 243488 243610 1000 + . gene_id "MSTRG.122972"; transcript_id "MSTRG.122972.1"; exon_number "5"; scaffold_725 StringTie exon 243695 243771 1000 + . gene_id "MSTRG.122972"; transcript_id "MSTRG.122972.1"; exon_number "6"; scaffold_725 StringTie exon 243885 243919 1000 + . gene_id "MSTRG.122972"; transcript_id "MSTRG.122972.1"; exon_number "7"; scaffold_72527 StringTie exon 237 587 1000 . . gene_id "MSTRG.123002"; transcript_id "MSTRG.123002.1"; exon_number "1"; scaffold_7253 StringTie exon 2591 2927 1000 . . gene_id "MSTRG.123007"; transcript_id "MSTRG.123007.1"; exon_number "1"; scaffold_72533 StringTie exon 1050 1280 1000 . . gene_id "MSTRG.123008"; transcript_id "MSTRG.123008.1"; exon_number "1"; scaffold_72576 StringTie exon 1528 1769 1000 . . gene_id "MSTRG.123036"; transcript_id "MSTRG.123036.1"; exon_number "1"; scaffold_72597 StringTie exon 421 904 1000 . . gene_id "MSTRG.123047"; transcript_id "MSTRG.123047.1"; exon_number "1"; scaffold_726 StringTie exon 211006 211221 1000 . . gene_id "MSTRG.123068"; transcript_id "MSTRG.123068.1"; exon_number "1"; scaffold_726 StringTie exon 316631 316925 1000 . . gene_id "MSTRG.123070"; transcript_id "MSTRG.123070.1"; exon_number "1"; scaffold_726 StringTie exon 319333 319541 1000 + . gene_id "MSTRG.123071"; transcript_id "MSTRG.123071.1"; exon_number "1"; scaffold_726 StringTie exon 319766 319889 1000 + . gene_id "MSTRG.123071"; transcript_id "MSTRG.123071.1"; exon_number "2"; scaffold_72616 StringTie exon 697 929 1000 . . gene_id "MSTRG.123097"; transcript_id "MSTRG.123097.1"; exon_number "1"; scaffold_7264 StringTie exon 1493 1630 1000 + . gene_id "MSTRG.123109"; transcript_id "MSTRG.123109.1"; exon_number "1"; scaffold_7264 StringTie exon 1839 2223 1000 + . gene_id "MSTRG.123109"; transcript_id "MSTRG.123109.1"; exon_number "2"; scaffold_7264 StringTie exon 2329 2486 1000 + . gene_id "MSTRG.123109"; transcript_id "MSTRG.123109.1"; exon_number "3"; scaffold_72666 StringTie exon 316 748 1000 + . gene_id "MSTRG.123125"; transcript_id "MSTRG.123125.1"; exon_number "1"; scaffold_72666 StringTie exon 1310 1437 1000 + . gene_id "MSTRG.123125"; transcript_id "MSTRG.123125.1"; exon_number "2"; scaffold_72667 StringTie exon 4 277 1000 . . gene_id "MSTRG.123126"; transcript_id "MSTRG.123126.1"; exon_number "1"; scaffold_72682 StringTie exon 1185 1426 1000 . . gene_id "MSTRG.123134"; transcript_id "MSTRG.123134.1"; exon_number "1"; scaffold_72684 StringTie exon 1573 1781 1000 . . gene_id "MSTRG.123135"; transcript_id "MSTRG.123135.1"; exon_number "1"; scaffold_72686 StringTie exon 314 516 1000 . . gene_id "MSTRG.123136"; transcript_id "MSTRG.123136.1"; exon_number "1"; scaffold_7269 StringTie exon 30045 30275 1000 . . gene_id "MSTRG.123137"; transcript_id "MSTRG.123137.1"; exon_number "1"; scaffold_727 StringTie exon 67475 67706 1000 . . gene_id "MSTRG.123145"; transcript_id "MSTRG.123145.1"; exon_number "1"; scaffold_727 StringTie exon 95763 95841 1000 + . gene_id "MSTRG.123150"; transcript_id "MSTRG.123150.1"; exon_number "1"; scaffold_727 StringTie exon 96218 96308 1000 + . gene_id "MSTRG.123150"; transcript_id "MSTRG.123150.1"; exon_number "2"; scaffold_727 StringTie exon 96736 96828 1000 + . gene_id "MSTRG.123150"; transcript_id "MSTRG.123150.1"; exon_number "3"; scaffold_727 StringTie exon 312317 312589 1000 . . gene_id "MSTRG.123166"; transcript_id "MSTRG.123166.1"; exon_number "1"; scaffold_727 StringTie exon 495274 495634 1000 . . gene_id "MSTRG.123188"; transcript_id "MSTRG.123188.1"; exon_number "1"; scaffold_727 StringTie exon 523125 524315 1000 - . gene_id "MSTRG.123189"; transcript_id "MSTRG.123189.1"; exon_number "1"; scaffold_727 StringTie exon 524421 524531 1000 - . gene_id "MSTRG.123189"; transcript_id "MSTRG.123189.1"; exon_number "2"; scaffold_727 StringTie exon 524645 524753 1000 - . gene_id "MSTRG.123189"; transcript_id "MSTRG.123189.1"; exon_number "3"; scaffold_727 StringTie exon 525747 526113 1000 - . gene_id "MSTRG.123189"; transcript_id "MSTRG.123189.1"; exon_number "4"; scaffold_72721 StringTie exon 1041 1342 1000 . . gene_id "MSTRG.123203"; transcript_id "MSTRG.123203.1"; exon_number "1"; scaffold_7273 StringTie exon 956 1264 1000 . . gene_id "MSTRG.123205"; transcript_id "MSTRG.123205.1"; exon_number "1"; scaffold_72732 StringTie exon 96 252 1000 - . gene_id "MSTRG.123210"; transcript_id "MSTRG.123210.1"; exon_number "1"; scaffold_72732 StringTie exon 1162 1309 1000 - . gene_id "MSTRG.123210"; transcript_id "MSTRG.123210.1"; exon_number "2"; scaffold_72759 StringTie exon 1029 1244 1000 - . gene_id "MSTRG.123220"; transcript_id "MSTRG.123220.1"; exon_number "1"; scaffold_728 StringTie exon 23315 23576 1000 . . gene_id "MSTRG.123242"; transcript_id "MSTRG.123242.1"; exon_number "1"; scaffold_728 StringTie exon 163188 163391 1000 . . gene_id "MSTRG.123259"; transcript_id "MSTRG.123259.1"; exon_number "1"; scaffold_728 StringTie exon 307512 307640 1000 + . gene_id "MSTRG.123272"; transcript_id "MSTRG.123272.2"; exon_number "1"; scaffold_728 StringTie exon 308850 310199 1000 + . gene_id "MSTRG.123272"; transcript_id "MSTRG.123272.2"; exon_number "2"; scaffold_72807 StringTie exon 1543 2132 1000 . . gene_id "MSTRG.123294"; transcript_id "MSTRG.123294.1"; exon_number "1"; scaffold_7285 StringTie exon 16662 16885 1000 . . gene_id "MSTRG.123323"; transcript_id "MSTRG.123323.1"; exon_number "1"; scaffold_729 StringTie exon 88013 88215 1000 . . gene_id "MSTRG.123341"; transcript_id "MSTRG.123341.1"; exon_number "1"; scaffold_729 StringTie exon 175546 175770 1000 . . gene_id "MSTRG.123346"; transcript_id "MSTRG.123346.1"; exon_number "1"; scaffold_729 StringTie exon 221158 221509 1000 . . gene_id "MSTRG.123353"; transcript_id "MSTRG.123353.1"; exon_number "1"; scaffold_729 StringTie exon 326758 327107 1000 . . gene_id "MSTRG.123360"; transcript_id "MSTRG.123360.1"; exon_number "1"; scaffold_729 StringTie exon 368743 368761 1000 + . gene_id "MSTRG.123363"; transcript_id "MSTRG.123363.1"; exon_number "1"; scaffold_729 StringTie exon 369050 369438 1000 + . gene_id "MSTRG.123363"; transcript_id "MSTRG.123363.1"; exon_number "2"; scaffold_729 StringTie exon 371709 371937 1000 . . gene_id "MSTRG.123365"; transcript_id "MSTRG.123365.1"; exon_number "1"; scaffold_7292 StringTie exon 22174 22423 1000 . . gene_id "MSTRG.123389"; transcript_id "MSTRG.123389.1"; exon_number "1"; scaffold_7293 StringTie exon 1001 1056 1000 - . gene_id "MSTRG.123392"; transcript_id "MSTRG.123392.1"; exon_number "1"; scaffold_7293 StringTie exon 1411 1567 1000 - . gene_id "MSTRG.123392"; transcript_id "MSTRG.123392.1"; exon_number "2"; scaffold_7293 StringTie exon 1683 1730 1000 - . gene_id "MSTRG.123392"; transcript_id "MSTRG.123392.1"; exon_number "3"; scaffold_7294 StringTie exon 7210 7223 1000 - . gene_id "MSTRG.123397"; transcript_id "MSTRG.123397.1"; exon_number "1"; scaffold_7294 StringTie exon 7336 7369 1000 - . gene_id "MSTRG.123397"; transcript_id "MSTRG.123397.1"; exon_number "2"; scaffold_7294 StringTie exon 10976 11062 1000 - . gene_id "MSTRG.123397"; transcript_id "MSTRG.123397.1"; exon_number "3"; scaffold_7294 StringTie exon 11399 11494 1000 - . gene_id "MSTRG.123397"; transcript_id "MSTRG.123397.1"; exon_number "4"; scaffold_7294 StringTie exon 11614 11659 1000 - . gene_id "MSTRG.123397"; transcript_id "MSTRG.123397.1"; exon_number "5"; scaffold_73 StringTie exon 98011 98539 1000 . . gene_id "MSTRG.123433"; transcript_id "MSTRG.123433.1"; exon_number "1"; scaffold_73 StringTie exon 104011 104104 1000 + . gene_id "MSTRG.123434"; transcript_id "MSTRG.123434.1"; exon_number "1"; scaffold_73 StringTie exon 104598 104828 1000 + . gene_id "MSTRG.123434"; transcript_id "MSTRG.123434.1"; exon_number "2"; scaffold_73 StringTie exon 105467 105568 1000 + . gene_id "MSTRG.123434"; transcript_id "MSTRG.123434.1"; exon_number "3"; scaffold_73 StringTie exon 485079 485420 1000 . . gene_id "MSTRG.123460"; transcript_id "MSTRG.123460.1"; exon_number "1"; scaffold_73 StringTie exon 496061 496109 1000 + . gene_id "MSTRG.123464"; transcript_id "MSTRG.123464.1"; exon_number "1"; scaffold_73 StringTie exon 496859 496944 1000 + . gene_id "MSTRG.123464"; transcript_id "MSTRG.123464.1"; exon_number "2"; scaffold_73 StringTie exon 497058 497225 1000 + . gene_id "MSTRG.123464"; transcript_id "MSTRG.123464.1"; exon_number "3"; scaffold_73 StringTie exon 498232 498427 1000 + . gene_id "MSTRG.123464"; transcript_id "MSTRG.123464.1"; exon_number "4"; scaffold_73 StringTie exon 1278138 1278365 1000 - . gene_id "MSTRG.123505"; transcript_id "MSTRG.123505.1"; exon_number "1"; scaffold_73 StringTie exon 1572500 1572794 1000 . . gene_id "MSTRG.123518"; transcript_id "MSTRG.123518.1"; exon_number "1"; scaffold_73 StringTie exon 1861992 1863112 1000 . . gene_id "MSTRG.123536"; transcript_id "MSTRG.123536.1"; exon_number "1"; scaffold_73 StringTie exon 1899350 1899697 1000 - . gene_id "MSTRG.123543"; transcript_id "MSTRG.123543.1"; exon_number "1"; scaffold_73 StringTie exon 1900157 1900411 1000 - . gene_id "MSTRG.123543"; transcript_id "MSTRG.123543.1"; exon_number "2"; scaffold_73 StringTie exon 1916290 1916300 1000 - . gene_id "MSTRG.123543"; transcript_id "MSTRG.123543.1"; exon_number "3"; scaffold_73 StringTie exon 1920708 1920911 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "1"; scaffold_73 StringTie exon 1934382 1934581 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "2"; scaffold_73 StringTie exon 1936517 1936627 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "3"; scaffold_73 StringTie exon 1936713 1936805 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "4"; scaffold_73 StringTie exon 1936932 1937062 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "5"; scaffold_73 StringTie exon 1937200 1937259 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "6"; scaffold_73 StringTie exon 1937368 1937476 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "7"; scaffold_73 StringTie exon 1937654 1937707 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "8"; scaffold_73 StringTie exon 1937921 1938091 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "9"; scaffold_73 StringTie exon 1938197 1938324 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "10"; scaffold_73 StringTie exon 1938496 1938597 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "11"; scaffold_73 StringTie exon 1938683 1938755 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "12"; scaffold_73 StringTie exon 1939105 1939215 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "13"; scaffold_73 StringTie exon 1940580 1940926 1000 + . gene_id "MSTRG.123544"; transcript_id "MSTRG.123544.1"; exon_number "14"; scaffold_730 StringTie exon 494843 495593 1000 . . gene_id "MSTRG.123559"; transcript_id "MSTRG.123559.1"; exon_number "1"; scaffold_7304 StringTie exon 18862 19182 1000 . . gene_id "MSTRG.123581"; transcript_id "MSTRG.123581.1"; exon_number "1"; scaffold_73066 StringTie exon 1440 1796 1000 . . gene_id "MSTRG.123595"; transcript_id "MSTRG.123595.1"; exon_number "1"; scaffold_73078 StringTie exon 95 368 1000 . . gene_id "MSTRG.123605"; transcript_id "MSTRG.123605.1"; exon_number "1"; scaffold_73091 StringTie exon 1555 2065 1000 . . gene_id "MSTRG.123613"; transcript_id "MSTRG.123613.1"; exon_number "1"; scaffold_731 StringTie exon 113869 114206 1000 + . gene_id "MSTRG.123623"; transcript_id "MSTRG.123623.1"; exon_number "1"; scaffold_731 StringTie exon 114559 114681 1000 + . gene_id "MSTRG.123623"; transcript_id "MSTRG.123623.1"; exon_number "2"; scaffold_731 StringTie exon 114960 115765 1000 + . gene_id "MSTRG.123623"; transcript_id "MSTRG.123623.1"; exon_number "3"; scaffold_731 StringTie exon 117860 118013 1000 - . gene_id "MSTRG.123624"; transcript_id "MSTRG.123624.1"; exon_number "1"; scaffold_731 StringTie exon 118207 118306 1000 - . gene_id "MSTRG.123624"; transcript_id "MSTRG.123624.1"; exon_number "2"; scaffold_731 StringTie exon 175022 175256 1000 . . gene_id "MSTRG.123626"; transcript_id "MSTRG.123626.1"; exon_number "1"; scaffold_731 StringTie exon 256884 257146 1000 . . gene_id "MSTRG.123629"; transcript_id "MSTRG.123629.1"; exon_number "1"; scaffold_731 StringTie exon 401795 402601 1000 + . gene_id "MSTRG.123643"; transcript_id "MSTRG.123643.1"; exon_number "1"; scaffold_7313 StringTie exon 5416 5643 1000 . . gene_id "MSTRG.123668"; transcript_id "MSTRG.123668.1"; exon_number "1"; scaffold_73186 StringTie exon 64 287 1000 . . gene_id "MSTRG.123703"; transcript_id "MSTRG.123703.1"; exon_number "1"; scaffold_73188 StringTie exon 827 1080 1000 . . gene_id "MSTRG.123704"; transcript_id "MSTRG.123704.1"; exon_number "1"; scaffold_732 StringTie exon 59971 60177 1000 . . gene_id "MSTRG.123716"; transcript_id "MSTRG.123716.1"; exon_number "1"; scaffold_732 StringTie exon 127890 128090 1000 . . gene_id "MSTRG.123727"; transcript_id "MSTRG.123727.1"; exon_number "1"; scaffold_732 StringTie exon 326978 327008 1000 - . gene_id "MSTRG.123745"; transcript_id "MSTRG.123745.1"; exon_number "1"; scaffold_732 StringTie exon 327343 327394 1000 - . gene_id "MSTRG.123745"; transcript_id "MSTRG.123745.1"; exon_number "2"; scaffold_732 StringTie exon 328050 328197 1000 - . gene_id "MSTRG.123745"; transcript_id "MSTRG.123745.1"; exon_number "3"; scaffold_73201 StringTie exon 339 1502 1000 . . gene_id "MSTRG.123765"; transcript_id "MSTRG.123765.1"; exon_number "1"; scaffold_73211 StringTie exon 502 1160 1000 . . gene_id "MSTRG.123768"; transcript_id "MSTRG.123768.1"; exon_number "1"; scaffold_73230 StringTie exon 50 664 1000 . . gene_id "MSTRG.123778"; transcript_id "MSTRG.123778.1"; exon_number "1"; scaffold_7326 StringTie exon 10952 13645 1000 . . gene_id "MSTRG.123803"; transcript_id "MSTRG.123803.1"; exon_number "1"; scaffold_73260 StringTie exon 449 821 1000 - . gene_id "MSTRG.123806"; transcript_id "MSTRG.123806.1"; exon_number "1"; scaffold_73286 StringTie exon 162 324 1000 + . gene_id "MSTRG.123819"; transcript_id "MSTRG.123819.1"; exon_number "1"; scaffold_73286 StringTie exon 1288 1467 1000 + . gene_id "MSTRG.123819"; transcript_id "MSTRG.123819.1"; exon_number "2"; scaffold_73286 StringTie exon 1748 1909 1000 + . gene_id "MSTRG.123819"; transcript_id "MSTRG.123819.1"; exon_number "3"; scaffold_7329 StringTie exon 24840 25135 1000 . . gene_id "MSTRG.123822"; transcript_id "MSTRG.123822.1"; exon_number "1"; scaffold_733 StringTie exon 16723 16985 1000 . . gene_id "MSTRG.123826"; transcript_id "MSTRG.123826.1"; exon_number "1"; scaffold_733 StringTie exon 74751 74978 1000 . . gene_id "MSTRG.123829"; transcript_id "MSTRG.123829.1"; exon_number "1"; scaffold_733 StringTie exon 202654 203150 1000 . . gene_id "MSTRG.123851"; transcript_id "MSTRG.123851.1"; exon_number "1"; scaffold_733 StringTie exon 528697 528918 1000 . . gene_id "MSTRG.123870"; transcript_id "MSTRG.123870.1"; exon_number "1"; scaffold_73301 StringTie exon 1748 2016 1000 - . gene_id "MSTRG.123874"; transcript_id "MSTRG.123874.1"; exon_number "1"; scaffold_7332 StringTie exon 19681 20063 1000 . . gene_id "MSTRG.123884"; transcript_id "MSTRG.123884.1"; exon_number "1"; scaffold_734 StringTie exon 364942 365158 1000 . . gene_id "MSTRG.123949"; transcript_id "MSTRG.123949.1"; exon_number "1"; scaffold_73434 StringTie exon 1766 2086 1000 - . gene_id "MSTRG.123971"; transcript_id "MSTRG.123971.1"; exon_number "1"; scaffold_735 StringTie exon 26543 26685 1000 + . gene_id "MSTRG.124004"; transcript_id "MSTRG.124004.1"; exon_number "1"; scaffold_735 StringTie exon 26810 26930 1000 + . gene_id "MSTRG.124004"; transcript_id "MSTRG.124004.1"; exon_number "2"; scaffold_735 StringTie exon 30176 30226 1000 + . gene_id "MSTRG.124004"; transcript_id "MSTRG.124004.1"; exon_number "3"; scaffold_735 StringTie exon 30869 31258 1000 + . gene_id "MSTRG.124004"; transcript_id "MSTRG.124004.1"; exon_number "4"; scaffold_735 StringTie exon 32050 32241 1000 + . gene_id "MSTRG.124005"; transcript_id "MSTRG.124005.1"; exon_number "1"; scaffold_735 StringTie exon 32334 33168 1000 + . gene_id "MSTRG.124005"; transcript_id "MSTRG.124005.1"; exon_number "2"; scaffold_735 StringTie exon 74595 74807 1000 . . gene_id "MSTRG.124010"; transcript_id "MSTRG.124010.1"; exon_number "1"; scaffold_735 StringTie exon 167712 167919 1000 . . gene_id "MSTRG.124022"; transcript_id "MSTRG.124022.1"; exon_number "1"; scaffold_735 StringTie exon 372970 373220 1000 . . gene_id "MSTRG.124037"; transcript_id "MSTRG.124037.1"; exon_number "1"; scaffold_735 StringTie exon 406146 406496 1000 . . gene_id "MSTRG.124040"; transcript_id "MSTRG.124040.1"; exon_number "1"; scaffold_73533 StringTie exon 10 231 1000 . . gene_id "MSTRG.124054"; transcript_id "MSTRG.124054.1"; exon_number "1"; scaffold_7355 StringTie exon 15413 15676 1000 . . gene_id "MSTRG.124065"; transcript_id "MSTRG.124065.1"; exon_number "1"; scaffold_7355 StringTie exon 18027 18260 1000 . . gene_id "MSTRG.124066"; transcript_id "MSTRG.124066.1"; exon_number "1"; scaffold_73552 StringTie exon 185 470 1000 . . gene_id "MSTRG.124067"; transcript_id "MSTRG.124067.1"; exon_number "1"; scaffold_736 StringTie exon 266582 266784 1000 . . gene_id "MSTRG.124110"; transcript_id "MSTRG.124110.1"; exon_number "1"; scaffold_736 StringTie exon 326500 326778 1000 . . gene_id "MSTRG.124117"; transcript_id "MSTRG.124117.1"; exon_number "1"; scaffold_736 StringTie exon 367203 367475 1000 . . gene_id "MSTRG.124119"; transcript_id "MSTRG.124119.1"; exon_number "1"; scaffold_7360 StringTie exon 17524 19147 1000 . . gene_id "MSTRG.124135"; transcript_id "MSTRG.124135.1"; exon_number "1"; scaffold_73600 StringTie exon 212 377 1000 + . gene_id "MSTRG.124137"; transcript_id "MSTRG.124137.1"; exon_number "1"; scaffold_73600 StringTie exon 530 691 1000 + . gene_id "MSTRG.124137"; transcript_id "MSTRG.124137.1"; exon_number "2"; scaffold_73600 StringTie exon 1210 1344 1000 + . gene_id "MSTRG.124137"; transcript_id "MSTRG.124137.1"; exon_number "3"; scaffold_73619 StringTie exon 1 339 1000 . . gene_id "MSTRG.124143"; transcript_id "MSTRG.124143.1"; exon_number "1"; scaffold_7363 StringTie exon 28909 29145 1000 . . gene_id "MSTRG.124148"; transcript_id "MSTRG.124148.1"; exon_number "1"; scaffold_73662 StringTie exon 1485 1687 1000 . . gene_id "MSTRG.124167"; transcript_id "MSTRG.124167.1"; exon_number "1"; scaffold_737 StringTie exon 325572 325859 1000 . . gene_id "MSTRG.124203"; transcript_id "MSTRG.124203.1"; exon_number "1"; scaffold_737 StringTie exon 335243 335279 1000 - . gene_id "MSTRG.124205"; transcript_id "MSTRG.124205.1"; exon_number "1"; scaffold_737 StringTie exon 335380 335409 1000 - . gene_id "MSTRG.124205"; transcript_id "MSTRG.124205.1"; exon_number "2"; scaffold_737 StringTie exon 335551 335598 1000 - . gene_id "MSTRG.124205"; transcript_id "MSTRG.124205.1"; exon_number "3"; scaffold_737 StringTie exon 335743 335818 1000 - . gene_id "MSTRG.124205"; transcript_id "MSTRG.124205.1"; exon_number "4"; scaffold_737 StringTie exon 335941 335987 1000 - . gene_id "MSTRG.124205"; transcript_id "MSTRG.124205.1"; exon_number "5"; scaffold_737 StringTie exon 336335 336359 1000 - . gene_id "MSTRG.124205"; transcript_id "MSTRG.124205.1"; exon_number "6"; scaffold_737 StringTie exon 397724 399284 1000 . . gene_id "MSTRG.124214"; transcript_id "MSTRG.124214.1"; exon_number "1"; scaffold_737 StringTie exon 504355 504633 1000 . . gene_id "MSTRG.124224"; transcript_id "MSTRG.124224.1"; exon_number "1"; scaffold_737 StringTie exon 505162 505657 1000 . . gene_id "MSTRG.124225"; transcript_id "MSTRG.124225.1"; exon_number "1"; scaffold_738 StringTie exon 126663 126864 1000 . . gene_id "MSTRG.124279"; transcript_id "MSTRG.124279.1"; exon_number "1"; scaffold_738 StringTie exon 464291 464569 1000 . . gene_id "MSTRG.124300"; transcript_id "MSTRG.124300.1"; exon_number "1"; scaffold_73804 StringTie exon 112 384 1000 . . gene_id "MSTRG.124305"; transcript_id "MSTRG.124305.1"; exon_number "1"; scaffold_7381 StringTie exon 13655 13950 1000 . . gene_id "MSTRG.124307"; transcript_id "MSTRG.124307.1"; exon_number "1"; scaffold_73830 StringTie exon 1094 1322 1000 . . gene_id "MSTRG.124325"; transcript_id "MSTRG.124325.1"; exon_number "1"; scaffold_7384 StringTie exon 2329 2559 1000 . . gene_id "MSTRG.124328"; transcript_id "MSTRG.124328.1"; exon_number "1"; scaffold_7388 StringTie exon 23628 23788 1000 + . gene_id "MSTRG.124343"; transcript_id "MSTRG.124343.1"; exon_number "1"; scaffold_7388 StringTie exon 24199 24420 1000 + . gene_id "MSTRG.124343"; transcript_id "MSTRG.124343.1"; exon_number "2"; scaffold_7388 StringTie exon 28101 28191 1000 + . gene_id "MSTRG.124343"; transcript_id "MSTRG.124343.1"; exon_number "3"; scaffold_7388 StringTie exon 29024 29125 1000 + . gene_id "MSTRG.124343"; transcript_id "MSTRG.124343.1"; exon_number "4"; scaffold_7388 StringTie exon 30454 30741 1000 + . gene_id "MSTRG.124343"; transcript_id "MSTRG.124343.1"; exon_number "5"; scaffold_739 StringTie exon 156792 157082 1000 . . gene_id "MSTRG.124363"; transcript_id "MSTRG.124363.1"; exon_number "1"; scaffold_739 StringTie exon 163602 163954 1000 . . gene_id "MSTRG.124364"; transcript_id "MSTRG.124364.1"; exon_number "1"; scaffold_73958 StringTie exon 1270 1752 1000 . . gene_id "MSTRG.124410"; transcript_id "MSTRG.124410.1"; exon_number "1"; scaffold_7397 StringTie exon 21390 22168 1000 . . gene_id "MSTRG.124420"; transcript_id "MSTRG.124420.1"; exon_number "1"; scaffold_7398 StringTie exon 2349 2584 1000 . . gene_id "MSTRG.124422"; transcript_id "MSTRG.124422.1"; exon_number "1"; scaffold_7399 StringTie exon 24342 26276 1000 + . gene_id "MSTRG.124431"; transcript_id "MSTRG.124431.1"; exon_number "1"; scaffold_74 StringTie exon 181665 182045 1000 . . gene_id "MSTRG.124446"; transcript_id "MSTRG.124446.1"; exon_number "1"; scaffold_74 StringTie exon 613753 614069 1000 . . gene_id "MSTRG.124482"; transcript_id "MSTRG.124482.1"; exon_number "1"; scaffold_74 StringTie exon 615266 615297 1000 - . gene_id "MSTRG.124484"; transcript_id "MSTRG.124484.1"; exon_number "1"; scaffold_74 StringTie exon 615524 615630 1000 - . gene_id "MSTRG.124484"; transcript_id "MSTRG.124484.1"; exon_number "2"; scaffold_74 StringTie exon 615853 615958 1000 - . gene_id "MSTRG.124484"; transcript_id "MSTRG.124484.1"; exon_number "3"; scaffold_74 StringTie exon 620016 620121 1000 - . gene_id "MSTRG.124484"; transcript_id "MSTRG.124484.1"; exon_number "4"; scaffold_74 StringTie exon 742003 742170 1000 + . gene_id "MSTRG.124500"; transcript_id "MSTRG.124500.1"; exon_number "1"; scaffold_74 StringTie exon 742482 742663 1000 + . gene_id "MSTRG.124500"; transcript_id "MSTRG.124500.1"; exon_number "2"; scaffold_74 StringTie exon 764137 764456 1000 . . gene_id "MSTRG.124504"; transcript_id "MSTRG.124504.1"; exon_number "1"; scaffold_74 StringTie exon 810798 811026 1000 + . gene_id "MSTRG.124509"; transcript_id "MSTRG.124509.1"; exon_number "1"; scaffold_74 StringTie exon 811196 811260 1000 + . gene_id "MSTRG.124509"; transcript_id "MSTRG.124509.1"; exon_number "2"; scaffold_74 StringTie exon 811380 811404 1000 + . gene_id "MSTRG.124509"; transcript_id "MSTRG.124509.1"; exon_number "3"; scaffold_74 StringTie exon 879445 879530 1000 + . gene_id "MSTRG.124511"; transcript_id "MSTRG.124511.1"; exon_number "1"; scaffold_74 StringTie exon 879792 879978 1000 + . gene_id "MSTRG.124511"; transcript_id "MSTRG.124511.1"; exon_number "2"; scaffold_74 StringTie exon 880283 880384 1000 + . gene_id "MSTRG.124511"; transcript_id "MSTRG.124511.1"; exon_number "3"; scaffold_74 StringTie exon 881891 882043 1000 + . gene_id "MSTRG.124511"; transcript_id "MSTRG.124511.1"; exon_number "4"; scaffold_74 StringTie exon 883544 883640 1000 + . gene_id "MSTRG.124511"; transcript_id "MSTRG.124511.1"; exon_number "5"; scaffold_74 StringTie exon 883747 883977 1000 + . gene_id "MSTRG.124511"; transcript_id "MSTRG.124511.1"; exon_number "6"; scaffold_74 StringTie exon 1022741 1022860 1000 + . gene_id "MSTRG.124534"; transcript_id "MSTRG.124534.1"; exon_number "1"; scaffold_74 StringTie exon 1023002 1023761 1000 + . gene_id "MSTRG.124534"; transcript_id "MSTRG.124534.1"; exon_number "2"; scaffold_74 StringTie exon 1383071 1383308 1000 . . gene_id "MSTRG.124560"; transcript_id "MSTRG.124560.1"; exon_number "1"; scaffold_74 StringTie exon 1846952 1847024 1000 + . gene_id "MSTRG.124595"; transcript_id "MSTRG.124595.3"; exon_number "1"; scaffold_74 StringTie exon 1847244 1847311 1000 + . gene_id "MSTRG.124595"; transcript_id "MSTRG.124595.3"; exon_number "2"; scaffold_74 StringTie exon 1847399 1847510 1000 + . gene_id "MSTRG.124595"; transcript_id "MSTRG.124595.3"; exon_number "3"; scaffold_74 StringTie exon 1847653 1847753 1000 + . gene_id "MSTRG.124595"; transcript_id "MSTRG.124595.3"; exon_number "4"; scaffold_74 StringTie exon 1848000 1848040 1000 + . gene_id "MSTRG.124595"; transcript_id "MSTRG.124595.3"; exon_number "5"; scaffold_740 StringTie exon 116899 117111 1000 . . gene_id "MSTRG.124612"; transcript_id "MSTRG.124612.1"; exon_number "1"; scaffold_740 StringTie exon 157307 157787 1000 . . gene_id "MSTRG.124616"; transcript_id "MSTRG.124616.1"; exon_number "1"; scaffold_740 StringTie exon 191879 192563 1000 . . gene_id "MSTRG.124625"; transcript_id "MSTRG.124625.1"; exon_number "1"; scaffold_740 StringTie exon 384196 384527 1000 . . gene_id "MSTRG.124630"; transcript_id "MSTRG.124630.1"; exon_number "1"; scaffold_740 StringTie exon 459370 461227 1000 . . gene_id "MSTRG.124641"; transcript_id "MSTRG.124641.1"; exon_number "1"; scaffold_740 StringTie exon 462749 463207 1000 . . gene_id "MSTRG.124642"; transcript_id "MSTRG.124642.1"; exon_number "1"; scaffold_7400 StringTie exon 19250 19376 1000 + . gene_id "MSTRG.124650"; transcript_id "MSTRG.124650.1"; exon_number "1"; scaffold_7400 StringTie exon 19992 20098 1000 + . gene_id "MSTRG.124650"; transcript_id "MSTRG.124650.1"; exon_number "2"; scaffold_74017 StringTie exon 266 316 1000 + . gene_id "MSTRG.124657"; transcript_id "MSTRG.124657.1"; exon_number "1"; scaffold_74017 StringTie exon 1148 1329 1000 + . gene_id "MSTRG.124657"; transcript_id "MSTRG.124657.1"; exon_number "2"; scaffold_74034 StringTie exon 79 728 1000 . . gene_id "MSTRG.124663"; transcript_id "MSTRG.124663.1"; exon_number "1"; scaffold_741 StringTie exon 431582 431930 1000 . . gene_id "MSTRG.124713"; transcript_id "MSTRG.124713.1"; exon_number "1"; scaffold_7416 StringTie exon 8348 8600 1000 . . gene_id "MSTRG.124749"; transcript_id "MSTRG.124749.1"; exon_number "1"; scaffold_7418 StringTie exon 29807 30104 1000 . . gene_id "MSTRG.124767"; transcript_id "MSTRG.124767.1"; exon_number "1"; scaffold_74182 StringTie exon 187 747 1000 . . gene_id "MSTRG.124768"; transcript_id "MSTRG.124768.1"; exon_number "1"; scaffold_74198 StringTie exon 281 766 1000 . . gene_id "MSTRG.124777"; transcript_id "MSTRG.124777.1"; exon_number "1"; scaffold_742 StringTie exon 115070 115299 1000 . . gene_id "MSTRG.124791"; transcript_id "MSTRG.124791.1"; exon_number "1"; scaffold_742 StringTie exon 348731 348976 1000 . . gene_id "MSTRG.124799"; transcript_id "MSTRG.124799.1"; exon_number "1"; scaffold_742 StringTie exon 398658 398857 1000 . . gene_id "MSTRG.124800"; transcript_id "MSTRG.124800.1"; exon_number "1"; scaffold_74231 StringTie exon 1564 1783 1000 . . gene_id "MSTRG.124828"; transcript_id "MSTRG.124828.1"; exon_number "1"; scaffold_74251 StringTie exon 768 968 1000 . . gene_id "MSTRG.124839"; transcript_id "MSTRG.124839.1"; exon_number "1"; scaffold_74282 StringTie exon 1497 1727 1000 . . gene_id "MSTRG.124854"; transcript_id "MSTRG.124854.1"; exon_number "1"; scaffold_74285 StringTie exon 1866 2077 1000 . . gene_id "MSTRG.124856"; transcript_id "MSTRG.124856.1"; exon_number "1"; scaffold_743 StringTie exon 84918 85237 1000 . . gene_id "MSTRG.124864"; transcript_id "MSTRG.124864.1"; exon_number "1"; scaffold_744 StringTie exon 63976 65354 1000 - . gene_id "MSTRG.124936"; transcript_id "MSTRG.124936.1"; exon_number "1"; scaffold_744 StringTie exon 65492 65638 1000 - . gene_id "MSTRG.124936"; transcript_id "MSTRG.124936.1"; exon_number "2"; scaffold_744 StringTie exon 65781 65868 1000 - . gene_id "MSTRG.124936"; transcript_id "MSTRG.124936.1"; exon_number "3"; scaffold_744 StringTie exon 65930 66056 1000 - . gene_id "MSTRG.124936"; transcript_id "MSTRG.124936.1"; exon_number "4"; scaffold_744 StringTie exon 66148 66258 1000 - . gene_id "MSTRG.124936"; transcript_id "MSTRG.124936.1"; exon_number "5"; scaffold_744 StringTie exon 66859 67199 1000 - . gene_id "MSTRG.124936"; transcript_id "MSTRG.124936.1"; exon_number "6"; scaffold_7447 StringTie exon 10172 11197 1000 . . gene_id "MSTRG.124999"; transcript_id "MSTRG.124999.1"; exon_number "1"; scaffold_7447 StringTie exon 15690 15941 1000 . . gene_id "MSTRG.125000"; transcript_id "MSTRG.125000.1"; exon_number "1"; scaffold_745 StringTie exon 151635 151652 1000 - . gene_id "MSTRG.125020"; transcript_id "MSTRG.125020.1"; exon_number "1"; scaffold_745 StringTie exon 151854 152045 1000 - . gene_id "MSTRG.125020"; transcript_id "MSTRG.125020.1"; exon_number "2"; scaffold_745 StringTie exon 154608 154653 1000 - . gene_id "MSTRG.125020"; transcript_id "MSTRG.125020.1"; exon_number "3"; scaffold_745 StringTie exon 193538 193805 1000 . . gene_id "MSTRG.125025"; transcript_id "MSTRG.125025.1"; exon_number "1"; scaffold_745 StringTie exon 293572 293774 1000 . . gene_id "MSTRG.125031"; transcript_id "MSTRG.125031.1"; exon_number "1"; scaffold_745 StringTie exon 392781 392867 1000 + . gene_id "MSTRG.125042"; transcript_id "MSTRG.125042.1"; exon_number "1"; scaffold_745 StringTie exon 395814 396039 1000 + . gene_id "MSTRG.125042"; transcript_id "MSTRG.125042.1"; exon_number "2"; scaffold_745 StringTie exon 396175 396230 1000 + . gene_id "MSTRG.125042"; transcript_id "MSTRG.125042.1"; exon_number "3"; scaffold_74515 StringTie exon 484 2075 1000 . . gene_id "MSTRG.125056"; transcript_id "MSTRG.125056.1"; exon_number "1"; scaffold_7456 StringTie exon 6981 7244 1000 . . gene_id "MSTRG.125073"; transcript_id "MSTRG.125073.1"; exon_number "1"; scaffold_74594 StringTie exon 1696 1915 1000 . . gene_id "MSTRG.125092"; transcript_id "MSTRG.125092.1"; exon_number "1"; scaffold_746 StringTie exon 59824 60005 1000 + . gene_id "MSTRG.125100"; transcript_id "MSTRG.125100.1"; exon_number "1"; scaffold_746 StringTie exon 60153 60179 1000 + . gene_id "MSTRG.125100"; transcript_id "MSTRG.125100.1"; exon_number "2"; scaffold_7463 StringTie exon 18964 19081 1000 + . gene_id "MSTRG.125145"; transcript_id "MSTRG.125145.1"; exon_number "1"; scaffold_7463 StringTie exon 21518 21633 1000 + . gene_id "MSTRG.125145"; transcript_id "MSTRG.125145.1"; exon_number "2"; scaffold_7464 StringTie exon 3409 3797 1000 . . gene_id "MSTRG.125152"; transcript_id "MSTRG.125152.1"; exon_number "1"; scaffold_74655 StringTie exon 342 568 1000 . . gene_id "MSTRG.125162"; transcript_id "MSTRG.125162.1"; exon_number "1"; scaffold_7468 StringTie exon 29962 30215 1000 . . gene_id "MSTRG.125172"; transcript_id "MSTRG.125172.1"; exon_number "1"; scaffold_747 StringTie exon 37540 38061 1000 . . gene_id "MSTRG.125184"; transcript_id "MSTRG.125184.1"; exon_number "1"; scaffold_747 StringTie exon 149374 149465 1000 + . gene_id "MSTRG.125188"; transcript_id "MSTRG.125188.1"; exon_number "1"; scaffold_747 StringTie exon 149570 149717 1000 + . gene_id "MSTRG.125188"; transcript_id "MSTRG.125188.1"; exon_number "2"; scaffold_74734 StringTie exon 324 1385 1000 . . gene_id "MSTRG.125232"; transcript_id "MSTRG.125232.1"; exon_number "1"; scaffold_7476 StringTie exon 8586 8960 1000 + . gene_id "MSTRG.125239"; transcript_id "MSTRG.125239.1"; exon_number "1"; scaffold_7476 StringTie exon 10834 11017 1000 + . gene_id "MSTRG.125239"; transcript_id "MSTRG.125239.1"; exon_number "2"; scaffold_7476 StringTie exon 11595 11838 1000 + . gene_id "MSTRG.125239"; transcript_id "MSTRG.125239.1"; exon_number "3"; scaffold_7476 StringTie exon 12109 12149 1000 + . gene_id "MSTRG.125239"; transcript_id "MSTRG.125239.1"; exon_number "4"; scaffold_74801 StringTie exon 94 403 1000 + . gene_id "MSTRG.125290"; transcript_id "MSTRG.125290.1"; exon_number "1"; scaffold_74801 StringTie exon 567 676 1000 + . gene_id "MSTRG.125290"; transcript_id "MSTRG.125290.1"; exon_number "2"; scaffold_74801 StringTie exon 884 1069 1000 + . gene_id "MSTRG.125290"; transcript_id "MSTRG.125290.1"; exon_number "3"; scaffold_74834 StringTie exon 547 637 1000 + . gene_id "MSTRG.125303"; transcript_id "MSTRG.125303.1"; exon_number "1"; scaffold_74834 StringTie exon 1486 1561 1000 + . gene_id "MSTRG.125303"; transcript_id "MSTRG.125303.1"; exon_number "2"; scaffold_74834 StringTie exon 1909 2060 1000 + . gene_id "MSTRG.125303"; transcript_id "MSTRG.125303.1"; exon_number "3"; scaffold_7489 StringTie exon 20187 20468 1000 . . gene_id "MSTRG.125330"; transcript_id "MSTRG.125330.1"; exon_number "1"; scaffold_749 StringTie exon 26907 27126 1000 . . gene_id "MSTRG.125336"; transcript_id "MSTRG.125336.1"; exon_number "1"; scaffold_74923 StringTie exon 965 1225 1000 . . gene_id "MSTRG.125400"; transcript_id "MSTRG.125400.1"; exon_number "1"; scaffold_74950 StringTie exon 1524 1856 1000 . . gene_id "MSTRG.125411"; transcript_id "MSTRG.125411.1"; exon_number "1"; scaffold_74951 StringTie exon 214 435 1000 . . gene_id "MSTRG.125412"; transcript_id "MSTRG.125412.1"; exon_number "1"; scaffold_7497 StringTie exon 29668 30111 1000 - . gene_id "MSTRG.125425"; transcript_id "MSTRG.125425.1"; exon_number "1"; scaffold_75 StringTie exon 19074 19354 1000 . . gene_id "MSTRG.125430"; transcript_id "MSTRG.125430.1"; exon_number "1"; scaffold_75 StringTie exon 24186 24492 1000 . . gene_id "MSTRG.125432"; transcript_id "MSTRG.125432.1"; exon_number "1"; scaffold_75 StringTie exon 427968 428310 1000 . . gene_id "MSTRG.125458"; transcript_id "MSTRG.125458.1"; exon_number "1"; scaffold_75 StringTie exon 468986 469249 1000 . . gene_id "MSTRG.125462"; transcript_id "MSTRG.125462.1"; exon_number "1"; scaffold_75 StringTie exon 587077 587277 1000 . . gene_id "MSTRG.125472"; transcript_id "MSTRG.125472.1"; exon_number "1"; scaffold_75 StringTie exon 769767 770065 1000 . . gene_id "MSTRG.125476"; transcript_id "MSTRG.125476.1"; exon_number "1"; scaffold_75 StringTie exon 933877 934090 1000 . . gene_id "MSTRG.125493"; transcript_id "MSTRG.125493.1"; exon_number "1"; scaffold_75 StringTie exon 1385296 1385750 1000 . . gene_id "MSTRG.125509"; transcript_id "MSTRG.125509.1"; exon_number "1"; scaffold_75 StringTie exon 1429034 1429344 1000 . . gene_id "MSTRG.125513"; transcript_id "MSTRG.125513.1"; exon_number "1"; scaffold_75 StringTie exon 1506908 1507205 1000 . . gene_id "MSTRG.125523"; transcript_id "MSTRG.125523.1"; exon_number "1"; scaffold_75 StringTie exon 1525994 1526203 1000 . . gene_id "MSTRG.125528"; transcript_id "MSTRG.125528.1"; exon_number "1"; scaffold_75 StringTie exon 1565580 1565935 1000 . . gene_id "MSTRG.125532"; transcript_id "MSTRG.125532.1"; exon_number "1"; scaffold_75 StringTie exon 1758956 1759332 1000 . . gene_id "MSTRG.125560"; transcript_id "MSTRG.125560.1"; exon_number "1"; scaffold_75 StringTie exon 1840015 1840090 1000 - . gene_id "MSTRG.125576"; transcript_id "MSTRG.125576.1"; exon_number "1"; scaffold_75 StringTie exon 1840352 1840438 1000 - . gene_id "MSTRG.125576"; transcript_id "MSTRG.125576.1"; exon_number "2"; scaffold_75 StringTie exon 1840723 1840814 1000 - . gene_id "MSTRG.125576"; transcript_id "MSTRG.125576.1"; exon_number "3"; scaffold_75 StringTie exon 1840921 1841007 1000 - . gene_id "MSTRG.125576"; transcript_id "MSTRG.125576.1"; exon_number "4"; scaffold_750 StringTie exon 116149 116403 1000 . . gene_id "MSTRG.125594"; transcript_id "MSTRG.125594.1"; exon_number "1"; scaffold_750 StringTie exon 127163 128007 1000 . . gene_id "MSTRG.125599"; transcript_id "MSTRG.125599.1"; exon_number "1"; scaffold_750 StringTie exon 411323 411587 1000 . . gene_id "MSTRG.125625"; transcript_id "MSTRG.125625.1"; exon_number "1"; scaffold_75014 StringTie exon 1529 1763 1000 . . gene_id "MSTRG.125642"; transcript_id "MSTRG.125642.1"; exon_number "1"; scaffold_75015 StringTie exon 763 1423 1000 . . gene_id "MSTRG.125643"; transcript_id "MSTRG.125643.1"; exon_number "1"; scaffold_75024 StringTie exon 333 554 1000 . . gene_id "MSTRG.125648"; transcript_id "MSTRG.125648.1"; exon_number "1"; scaffold_75047 StringTie exon 545 788 1000 . . gene_id "MSTRG.125653"; transcript_id "MSTRG.125653.1"; exon_number "1"; scaffold_751 StringTie exon 151784 152029 1000 . . gene_id "MSTRG.125679"; transcript_id "MSTRG.125679.1"; exon_number "1"; scaffold_751 StringTie exon 288471 288505 1000 - . gene_id "MSTRG.125687"; transcript_id "MSTRG.125687.1"; exon_number "1"; scaffold_751 StringTie exon 289417 289625 1000 - . gene_id "MSTRG.125687"; transcript_id "MSTRG.125687.1"; exon_number "2"; scaffold_751 StringTie exon 290339 290358 1000 - . gene_id "MSTRG.125687"; transcript_id "MSTRG.125687.1"; exon_number "3"; scaffold_751 StringTie exon 484772 484855 1000 - . gene_id "MSTRG.125696"; transcript_id "MSTRG.125696.1"; exon_number "1"; scaffold_751 StringTie exon 485029 485122 1000 - . gene_id "MSTRG.125696"; transcript_id "MSTRG.125696.1"; exon_number "2"; scaffold_751 StringTie exon 485233 485273 1000 - . gene_id "MSTRG.125696"; transcript_id "MSTRG.125696.1"; exon_number "3"; scaffold_751 StringTie exon 485860 485941 1000 - . gene_id "MSTRG.125696"; transcript_id "MSTRG.125696.1"; exon_number "4"; scaffold_751 StringTie exon 487059 487096 1000 - . gene_id "MSTRG.125696"; transcript_id "MSTRG.125696.1"; exon_number "5"; scaffold_7518 StringTie exon 234 369 1000 - . gene_id "MSTRG.125728"; transcript_id "MSTRG.125728.1"; exon_number "1"; scaffold_7518 StringTie exon 537 693 1000 - . gene_id "MSTRG.125728"; transcript_id "MSTRG.125728.1"; exon_number "2"; scaffold_7518 StringTie exon 890 989 1000 - . gene_id "MSTRG.125728"; transcript_id "MSTRG.125728.1"; exon_number "3"; scaffold_7518 StringTie exon 1337 1450 1000 - . gene_id "MSTRG.125728"; transcript_id "MSTRG.125728.1"; exon_number "4"; scaffold_7518 StringTie exon 2906 2925 1000 - . gene_id "MSTRG.125728"; transcript_id "MSTRG.125728.1"; exon_number "5"; scaffold_752 StringTie exon 56093 56331 1000 . . gene_id "MSTRG.125739"; transcript_id "MSTRG.125739.1"; exon_number "1"; scaffold_752 StringTie exon 153687 154409 1000 + . gene_id "MSTRG.125752"; transcript_id "MSTRG.125752.1"; exon_number "1"; scaffold_752 StringTie exon 155276 155414 1000 + . gene_id "MSTRG.125752"; transcript_id "MSTRG.125752.1"; exon_number "2"; scaffold_752 StringTie exon 155534 155662 1000 + . gene_id "MSTRG.125752"; transcript_id "MSTRG.125752.1"; exon_number "3"; scaffold_752 StringTie exon 155991 156091 1000 + . gene_id "MSTRG.125752"; transcript_id "MSTRG.125752.1"; exon_number "4"; scaffold_752 StringTie exon 157570 157696 1000 + . gene_id "MSTRG.125752"; transcript_id "MSTRG.125752.1"; exon_number "5"; scaffold_752 StringTie exon 157894 157991 1000 + . gene_id "MSTRG.125752"; transcript_id "MSTRG.125752.1"; exon_number "6"; scaffold_752 StringTie exon 161927 162101 1000 + . gene_id "MSTRG.125752"; transcript_id "MSTRG.125752.1"; exon_number "7"; scaffold_752 StringTie exon 162219 163440 1000 + . gene_id "MSTRG.125752"; transcript_id "MSTRG.125752.1"; exon_number "8"; scaffold_752 StringTie exon 218771 219002 1000 . . gene_id "MSTRG.125754"; transcript_id "MSTRG.125754.1"; exon_number "1"; scaffold_752 StringTie exon 272883 273016 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "1"; scaffold_752 StringTie exon 273589 273739 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "2"; scaffold_752 StringTie exon 273889 273998 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "3"; scaffold_752 StringTie exon 274191 274266 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "4"; scaffold_752 StringTie exon 274388 274452 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "5"; scaffold_752 StringTie exon 274562 274615 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "6"; scaffold_752 StringTie exon 274770 274821 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "7"; scaffold_752 StringTie exon 274979 275050 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "8"; scaffold_752 StringTie exon 275131 275216 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "9"; scaffold_752 StringTie exon 275354 275440 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "10"; scaffold_752 StringTie exon 275625 275724 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "11"; scaffold_752 StringTie exon 275864 275942 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "12"; scaffold_752 StringTie exon 276031 276270 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "13"; scaffold_752 StringTie exon 276360 276468 1000 + . gene_id "MSTRG.125763"; transcript_id "MSTRG.125763.2"; exon_number "14"; scaffold_75211 StringTie exon 292 616 1000 . . gene_id "MSTRG.125795"; transcript_id "MSTRG.125795.1"; exon_number "1"; scaffold_7522 StringTie exon 14571 14796 1000 . . gene_id "MSTRG.125800"; transcript_id "MSTRG.125800.1"; exon_number "1"; scaffold_7525 StringTie exon 3630 3896 1000 . . gene_id "MSTRG.125808"; transcript_id "MSTRG.125808.1"; exon_number "1"; scaffold_75334 StringTie exon 424 654 1000 . . gene_id "MSTRG.125861"; transcript_id "MSTRG.125861.1"; exon_number "1"; scaffold_75382 StringTie exon 1191 1428 1000 . . gene_id "MSTRG.125883"; transcript_id "MSTRG.125883.1"; exon_number "1"; scaffold_75397 StringTie exon 1486 1742 1000 . . gene_id "MSTRG.125892"; transcript_id "MSTRG.125892.1"; exon_number "1"; scaffold_754 StringTie exon 160529 160669 1000 + . gene_id "MSTRG.125912"; transcript_id "MSTRG.125912.1"; exon_number "1"; scaffold_754 StringTie exon 160980 161047 1000 + . gene_id "MSTRG.125912"; transcript_id "MSTRG.125912.1"; exon_number "2"; scaffold_754 StringTie exon 161200 161236 1000 + . gene_id "MSTRG.125912"; transcript_id "MSTRG.125912.1"; exon_number "3"; scaffold_754 StringTie exon 161523 161675 1000 + . gene_id "MSTRG.125912"; transcript_id "MSTRG.125912.1"; exon_number "4"; scaffold_754 StringTie exon 161703 161720 1000 + . gene_id "MSTRG.125913"; transcript_id "MSTRG.125913.1"; exon_number "1"; scaffold_754 StringTie exon 162169 162327 1000 + . gene_id "MSTRG.125913"; transcript_id "MSTRG.125913.1"; exon_number "2"; scaffold_754 StringTie exon 162744 162806 1000 + . gene_id "MSTRG.125913"; transcript_id "MSTRG.125913.1"; exon_number "3"; scaffold_754 StringTie exon 353110 353222 1000 - . gene_id "MSTRG.125947"; transcript_id "MSTRG.125947.1"; exon_number "1"; scaffold_754 StringTie exon 356998 357161 1000 - . gene_id "MSTRG.125947"; transcript_id "MSTRG.125947.1"; exon_number "2"; scaffold_754 StringTie exon 379532 379597 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "1"; scaffold_754 StringTie exon 379683 379869 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "2"; scaffold_754 StringTie exon 380188 380326 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "3"; scaffold_754 StringTie exon 380529 380717 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "4"; scaffold_754 StringTie exon 380824 380943 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "5"; scaffold_754 StringTie exon 381130 381255 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "6"; scaffold_754 StringTie exon 381595 381765 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "7"; scaffold_754 StringTie exon 381962 382060 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "8"; scaffold_754 StringTie exon 382615 382651 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "9"; scaffold_754 StringTie exon 383314 383352 1000 + . gene_id "MSTRG.125951"; transcript_id "MSTRG.125951.1"; exon_number "10"; scaffold_754 StringTie exon 399446 399728 1000 . . gene_id "MSTRG.125957"; transcript_id "MSTRG.125957.1"; exon_number "1"; scaffold_754 StringTie exon 468616 468853 1000 . . gene_id "MSTRG.125973"; transcript_id "MSTRG.125973.1"; exon_number "1"; scaffold_754 StringTie exon 491816 492321 1000 . . gene_id "MSTRG.125979"; transcript_id "MSTRG.125979.1"; exon_number "1"; scaffold_7540 StringTie exon 20691 21015 1000 . . gene_id "MSTRG.125984"; transcript_id "MSTRG.125984.1"; exon_number "1"; scaffold_75417 StringTie exon 16 94 1000 + . gene_id "MSTRG.125997"; transcript_id "MSTRG.125997.1"; exon_number "1"; scaffold_75417 StringTie exon 212 310 1000 + . gene_id "MSTRG.125997"; transcript_id "MSTRG.125997.1"; exon_number "2"; scaffold_75417 StringTie exon 429 590 1000 + . gene_id "MSTRG.125997"; transcript_id "MSTRG.125997.1"; exon_number "3"; scaffold_7545 StringTie exon 7744 7947 1000 . . gene_id "MSTRG.126011"; transcript_id "MSTRG.126011.1"; exon_number "1"; scaffold_75476 StringTie exon 147 177 1000 + . gene_id "MSTRG.126020"; transcript_id "MSTRG.126020.1"; exon_number "1"; scaffold_75476 StringTie exon 301 342 1000 + . gene_id "MSTRG.126020"; transcript_id "MSTRG.126020.1"; exon_number "2"; scaffold_75476 StringTie exon 441 485 1000 + . gene_id "MSTRG.126020"; transcript_id "MSTRG.126020.1"; exon_number "3"; scaffold_75476 StringTie exon 658 769 1000 + . gene_id "MSTRG.126020"; transcript_id "MSTRG.126020.1"; exon_number "4"; scaffold_7548 StringTie exon 29534 29665 1000 + . gene_id "MSTRG.126023"; transcript_id "MSTRG.126023.1"; exon_number "1"; scaffold_7548 StringTie exon 30015 30106 1000 + . gene_id "MSTRG.126023"; transcript_id "MSTRG.126023.1"; exon_number "2"; scaffold_75493 StringTie exon 1692 2076 1000 . . gene_id "MSTRG.126030"; transcript_id "MSTRG.126030.1"; exon_number "1"; scaffold_755 StringTie exon 444529 444759 1000 . . gene_id "MSTRG.126056"; transcript_id "MSTRG.126056.1"; exon_number "1"; scaffold_755 StringTie exon 485401 485664 1000 . . gene_id "MSTRG.126057"; transcript_id "MSTRG.126057.1"; exon_number "1"; scaffold_7552 StringTie exon 1687 1789 1000 + . gene_id "MSTRG.126066"; transcript_id "MSTRG.126066.1"; exon_number "1"; scaffold_7552 StringTie exon 1968 2048 1000 + . gene_id "MSTRG.126066"; transcript_id "MSTRG.126066.1"; exon_number "2"; scaffold_7552 StringTie exon 2153 2571 1000 + . gene_id "MSTRG.126066"; transcript_id "MSTRG.126066.1"; exon_number "3"; scaffold_7552 StringTie exon 5697 7701 1000 . . gene_id "MSTRG.126069"; transcript_id "MSTRG.126069.1"; exon_number "1"; scaffold_75570 StringTie exon 922 1261 1000 . . gene_id "MSTRG.126105"; transcript_id "MSTRG.126105.1"; exon_number "1"; scaffold_756 StringTie exon 5494 5820 1000 . . gene_id "MSTRG.126115"; transcript_id "MSTRG.126115.1"; exon_number "1"; scaffold_75611 StringTie exon 425 1261 1000 . . gene_id "MSTRG.126146"; transcript_id "MSTRG.126146.1"; exon_number "1"; scaffold_757 StringTie exon 63233 63466 1000 . . gene_id "MSTRG.126183"; transcript_id "MSTRG.126183.1"; exon_number "1"; scaffold_757 StringTie exon 146770 147006 1000 . . gene_id "MSTRG.126186"; transcript_id "MSTRG.126186.1"; exon_number "1"; scaffold_757 StringTie exon 438989 440366 1000 + . gene_id "MSTRG.126206"; transcript_id "MSTRG.126206.1"; exon_number "1"; scaffold_757 StringTie exon 447796 448275 1000 + . gene_id "MSTRG.126206"; transcript_id "MSTRG.126206.1"; exon_number "2"; scaffold_758 StringTie exon 481073 481300 1000 . . gene_id "MSTRG.126278"; transcript_id "MSTRG.126278.1"; exon_number "1"; scaffold_758 StringTie exon 484535 484753 1000 . . gene_id "MSTRG.126280"; transcript_id "MSTRG.126280.1"; exon_number "1"; scaffold_758 StringTie exon 500077 500322 1000 . . gene_id "MSTRG.126281"; transcript_id "MSTRG.126281.1"; exon_number "1"; scaffold_7582 StringTie exon 28510 28936 1000 - . gene_id "MSTRG.126288"; transcript_id "MSTRG.126288.1"; exon_number "1"; scaffold_7583 StringTie exon 14553 14585 1000 + . gene_id "MSTRG.126291"; transcript_id "MSTRG.126291.1"; exon_number "1"; scaffold_7583 StringTie exon 14756 14929 1000 + . gene_id "MSTRG.126291"; transcript_id "MSTRG.126291.1"; exon_number "2"; scaffold_75841 StringTie exon 1838 2048 1000 - . gene_id "MSTRG.126301"; transcript_id "MSTRG.126301.1"; exon_number "1"; scaffold_759 StringTie exon 182643 185080 1000 - . gene_id "MSTRG.126350"; transcript_id "MSTRG.126350.1"; exon_number "1"; scaffold_759 StringTie exon 185715 185786 1000 - . gene_id "MSTRG.126350"; transcript_id "MSTRG.126350.1"; exon_number "2"; scaffold_759 StringTie exon 185917 186018 1000 - . gene_id "MSTRG.126350"; transcript_id "MSTRG.126350.1"; exon_number "3"; scaffold_759 StringTie exon 186265 186469 1000 - . gene_id "MSTRG.126350"; transcript_id "MSTRG.126350.1"; exon_number "4"; scaffold_759 StringTie exon 187192 187405 1000 - . gene_id "MSTRG.126350"; transcript_id "MSTRG.126350.1"; exon_number "5"; scaffold_759 StringTie exon 187509 187608 1000 - . gene_id "MSTRG.126350"; transcript_id "MSTRG.126350.1"; exon_number "6"; scaffold_759 StringTie exon 197251 197267 1000 - . gene_id "MSTRG.126350"; transcript_id "MSTRG.126350.1"; exon_number "7"; scaffold_759 StringTie exon 222728 222949 1000 . . gene_id "MSTRG.126357"; transcript_id "MSTRG.126357.1"; exon_number "1"; scaffold_759 StringTie exon 232478 232628 1000 - . gene_id "MSTRG.126359"; transcript_id "MSTRG.126359.1"; exon_number "1"; scaffold_759 StringTie exon 232734 232913 1000 - . gene_id "MSTRG.126359"; transcript_id "MSTRG.126359.1"; exon_number "2"; scaffold_759 StringTie exon 233173 233436 1000 - . gene_id "MSTRG.126359"; transcript_id "MSTRG.126359.1"; exon_number "3"; scaffold_759 StringTie exon 234597 235302 1000 - . gene_id "MSTRG.126359"; transcript_id "MSTRG.126359.1"; exon_number "4"; scaffold_759 StringTie exon 363338 363357 1000 + . gene_id "MSTRG.126369"; transcript_id "MSTRG.126369.1"; exon_number "1"; scaffold_759 StringTie exon 364188 364347 1000 + . gene_id "MSTRG.126369"; transcript_id "MSTRG.126369.1"; exon_number "2"; scaffold_759 StringTie exon 364893 364930 1000 + . gene_id "MSTRG.126369"; transcript_id "MSTRG.126369.1"; exon_number "3"; scaffold_75916 StringTie exon 100 1575 1000 . . gene_id "MSTRG.126397"; transcript_id "MSTRG.126397.1"; exon_number "1"; scaffold_76 StringTie exon 65651 66301 1000 - . gene_id "MSTRG.126440"; transcript_id "MSTRG.126440.1"; exon_number "1"; scaffold_76 StringTie exon 66387 66756 1000 - . gene_id "MSTRG.126441"; transcript_id "MSTRG.126441.1"; exon_number "1"; scaffold_76 StringTie exon 67474 67523 1000 - . gene_id "MSTRG.126441"; transcript_id "MSTRG.126441.1"; exon_number "2"; scaffold_76 StringTie exon 169527 169806 1000 . . gene_id "MSTRG.126453"; transcript_id "MSTRG.126453.1"; exon_number "1"; scaffold_76 StringTie exon 827312 827537 1000 . . gene_id "MSTRG.126504"; transcript_id "MSTRG.126504.1"; exon_number "1"; scaffold_76 StringTie exon 924521 924582 1000 + . gene_id "MSTRG.126515"; transcript_id "MSTRG.126515.1"; exon_number "1"; scaffold_76 StringTie exon 924717 924837 1000 + . gene_id "MSTRG.126515"; transcript_id "MSTRG.126515.1"; exon_number "2"; scaffold_76 StringTie exon 925022 925147 1000 + . gene_id "MSTRG.126515"; transcript_id "MSTRG.126515.1"; exon_number "3"; scaffold_76 StringTie exon 925263 925298 1000 + . gene_id "MSTRG.126515"; transcript_id "MSTRG.126515.1"; exon_number "4"; scaffold_76 StringTie exon 929065 929652 1000 . . gene_id "MSTRG.126518"; transcript_id "MSTRG.126518.1"; exon_number "1"; scaffold_76 StringTie exon 1095491 1096009 1000 . . gene_id "MSTRG.126538"; transcript_id "MSTRG.126538.1"; exon_number "1"; scaffold_76 StringTie exon 1270950 1271162 1000 . . gene_id "MSTRG.126553"; transcript_id "MSTRG.126553.1"; exon_number "1"; scaffold_76 StringTie exon 1386698 1387009 1000 . . gene_id "MSTRG.126556"; transcript_id "MSTRG.126556.1"; exon_number "1"; scaffold_76 StringTie exon 1394954 1395269 1000 . . gene_id "MSTRG.126557"; transcript_id "MSTRG.126557.1"; exon_number "1"; scaffold_76 StringTie exon 1511453 1511780 1000 . . gene_id "MSTRG.126570"; transcript_id "MSTRG.126570.1"; exon_number "1"; scaffold_76 StringTie exon 1593843 1594192 1000 . . gene_id "MSTRG.126576"; transcript_id "MSTRG.126576.1"; exon_number "1"; scaffold_760 StringTie exon 504366 504565 1000 . . gene_id "MSTRG.126619"; transcript_id "MSTRG.126619.1"; exon_number "1"; scaffold_7603 StringTie exon 667 1579 1000 . . gene_id "MSTRG.126630"; transcript_id "MSTRG.126630.1"; exon_number "1"; scaffold_7603 StringTie exon 25940 26152 1000 . . gene_id "MSTRG.126631"; transcript_id "MSTRG.126631.1"; exon_number "1"; scaffold_7604 StringTie exon 19558 19777 1000 . . gene_id "MSTRG.126637"; transcript_id "MSTRG.126637.1"; exon_number "1"; scaffold_76096 StringTie exon 780 1041 1000 . . gene_id "MSTRG.126660"; transcript_id "MSTRG.126660.1"; exon_number "1"; scaffold_761 StringTie exon 48524 48758 1000 . . gene_id "MSTRG.126663"; transcript_id "MSTRG.126663.1"; exon_number "1"; scaffold_761 StringTie exon 168197 168417 1000 . . gene_id "MSTRG.126680"; transcript_id "MSTRG.126680.1"; exon_number "1"; scaffold_761 StringTie exon 171832 172128 1000 . . gene_id "MSTRG.126681"; transcript_id "MSTRG.126681.1"; exon_number "1"; scaffold_761 StringTie exon 250339 250919 1000 - . gene_id "MSTRG.126691"; transcript_id "MSTRG.126691.1"; exon_number "1"; scaffold_761 StringTie exon 251171 251283 1000 - . gene_id "MSTRG.126691"; transcript_id "MSTRG.126691.1"; exon_number "2"; scaffold_761 StringTie exon 251390 251432 1000 - . gene_id "MSTRG.126691"; transcript_id "MSTRG.126691.1"; exon_number "3"; scaffold_761 StringTie exon 251571 251660 1000 - . gene_id "MSTRG.126691"; transcript_id "MSTRG.126691.1"; exon_number "4"; scaffold_761 StringTie exon 251757 251830 1000 - . gene_id "MSTRG.126691"; transcript_id "MSTRG.126691.1"; exon_number "5"; scaffold_761 StringTie exon 251911 252471 1000 - . gene_id "MSTRG.126691"; transcript_id "MSTRG.126691.1"; exon_number "6"; scaffold_761 StringTie exon 457779 458007 1000 . . gene_id "MSTRG.126711"; transcript_id "MSTRG.126711.1"; exon_number "1"; scaffold_761 StringTie exon 502083 502355 1000 . . gene_id "MSTRG.126712"; transcript_id "MSTRG.126712.1"; exon_number "1"; scaffold_76154 StringTie exon 757 1133 1000 . . gene_id "MSTRG.126735"; transcript_id "MSTRG.126735.1"; exon_number "1"; scaffold_76162 StringTie exon 1532 1961 1000 . . gene_id "MSTRG.126741"; transcript_id "MSTRG.126741.1"; exon_number "1"; scaffold_762 StringTie exon 170610 170919 1000 . . gene_id "MSTRG.126779"; transcript_id "MSTRG.126779.1"; exon_number "1"; scaffold_762 StringTie exon 229033 229320 1000 . . gene_id "MSTRG.126782"; transcript_id "MSTRG.126782.1"; exon_number "1"; scaffold_762 StringTie exon 273349 273571 1000 . . gene_id "MSTRG.126785"; transcript_id "MSTRG.126785.1"; exon_number "1"; scaffold_762 StringTie exon 309952 309980 1000 - . gene_id "MSTRG.126790"; transcript_id "MSTRG.126790.1"; exon_number "1"; scaffold_762 StringTie exon 318622 318796 1000 - . gene_id "MSTRG.126790"; transcript_id "MSTRG.126790.1"; exon_number "2"; scaffold_762 StringTie exon 490916 491257 1000 . . gene_id "MSTRG.126810"; transcript_id "MSTRG.126810.1"; exon_number "1"; scaffold_76213 StringTie exon 65 163 1000 - . gene_id "MSTRG.126823"; transcript_id "MSTRG.126823.1"; exon_number "1"; scaffold_76213 StringTie exon 267 642 1000 - . gene_id "MSTRG.126823"; transcript_id "MSTRG.126823.1"; exon_number "2"; scaffold_76213 StringTie exon 800 936 1000 - . gene_id "MSTRG.126823"; transcript_id "MSTRG.126823.1"; exon_number "3"; scaffold_76213 StringTie exon 1133 1257 1000 - . gene_id "MSTRG.126823"; transcript_id "MSTRG.126823.1"; exon_number "4"; scaffold_76213 StringTie exon 1426 1684 1000 - . gene_id "MSTRG.126823"; transcript_id "MSTRG.126823.1"; exon_number "5"; scaffold_76213 StringTie exon 1784 1895 1000 - . gene_id "MSTRG.126823"; transcript_id "MSTRG.126823.1"; exon_number "6"; scaffold_76232 StringTie exon 6 226 1000 . . gene_id "MSTRG.126829"; transcript_id "MSTRG.126829.1"; exon_number "1"; scaffold_7624 StringTie exon 2299 2517 1000 . . gene_id "MSTRG.126835"; transcript_id "MSTRG.126835.1"; exon_number "1"; scaffold_7625 StringTie exon 30194 30435 1000 . . gene_id "MSTRG.126842"; transcript_id "MSTRG.126842.1"; exon_number "1"; scaffold_7627 StringTie exon 3460 3765 1000 . . gene_id "MSTRG.126850"; transcript_id "MSTRG.126850.1"; exon_number "1"; scaffold_76276 StringTie exon 1155 1382 1000 . . gene_id "MSTRG.126854"; transcript_id "MSTRG.126854.1"; exon_number "1"; scaffold_7628 StringTie exon 22344 22575 1000 - . gene_id "MSTRG.126858"; transcript_id "MSTRG.126858.1"; exon_number "1"; scaffold_7628 StringTie exon 24869 25211 1000 . . gene_id "MSTRG.126860"; transcript_id "MSTRG.126860.1"; exon_number "1"; scaffold_763 StringTie exon 445427 445671 1000 . . gene_id "MSTRG.126900"; transcript_id "MSTRG.126900.1"; exon_number "1"; scaffold_76327 StringTie exon 1515 1820 1000 . . gene_id "MSTRG.126938"; transcript_id "MSTRG.126938.1"; exon_number "1"; scaffold_76371 StringTie exon 1481 1736 1000 . . gene_id "MSTRG.126964"; transcript_id "MSTRG.126964.1"; exon_number "1"; scaffold_76417 StringTie exon 777 843 1000 + . gene_id "MSTRG.127031"; transcript_id "MSTRG.127031.1"; exon_number "1"; scaffold_76417 StringTie exon 1043 1283 1000 + . gene_id "MSTRG.127031"; transcript_id "MSTRG.127031.1"; exon_number "2"; scaffold_76417 StringTie exon 1368 1468 1000 + . gene_id "MSTRG.127031"; transcript_id "MSTRG.127031.1"; exon_number "3"; scaffold_76417 StringTie exon 1571 1823 1000 + . gene_id "MSTRG.127031"; transcript_id "MSTRG.127031.1"; exon_number "4"; scaffold_76461 StringTie exon 1037 1441 1000 + . gene_id "MSTRG.127047"; transcript_id "MSTRG.127047.1"; exon_number "1"; scaffold_7647 StringTie exon 22169 22433 1000 + . gene_id "MSTRG.127051"; transcript_id "MSTRG.127051.1"; exon_number "1"; scaffold_7647 StringTie exon 23757 25223 1000 + . gene_id "MSTRG.127051"; transcript_id "MSTRG.127051.1"; exon_number "2"; scaffold_765 StringTie exon 458529 458904 1000 . . gene_id "MSTRG.127109"; transcript_id "MSTRG.127109.1"; exon_number "1"; scaffold_765 StringTie exon 481326 481527 1000 . . gene_id "MSTRG.127114"; transcript_id "MSTRG.127114.1"; exon_number "1"; scaffold_76507 StringTie exon 552 892 1000 . . gene_id "MSTRG.127122"; transcript_id "MSTRG.127122.1"; exon_number "1"; scaffold_7651 StringTie exon 12754 12955 1000 . . gene_id "MSTRG.127124"; transcript_id "MSTRG.127124.1"; exon_number "1"; scaffold_7653 StringTie exon 23387 23744 1000 . . gene_id "MSTRG.127135"; transcript_id "MSTRG.127135.1"; exon_number "1"; scaffold_7655 StringTie exon 24036 24353 1000 . . gene_id "MSTRG.127149"; transcript_id "MSTRG.127149.1"; exon_number "1"; scaffold_7657 StringTie exon 15083 15297 1000 . . gene_id "MSTRG.127163"; transcript_id "MSTRG.127163.1"; exon_number "1"; scaffold_76572 StringTie exon 79 589 1000 . . gene_id "MSTRG.127167"; transcript_id "MSTRG.127167.1"; exon_number "1"; scaffold_766 StringTie exon 6332 7028 1000 . . gene_id "MSTRG.127176"; transcript_id "MSTRG.127176.1"; exon_number "1"; scaffold_766 StringTie exon 102205 102426 1000 . . gene_id "MSTRG.127185"; transcript_id "MSTRG.127185.1"; exon_number "1"; scaffold_766 StringTie exon 265350 265583 1000 - . gene_id "MSTRG.127200"; transcript_id "MSTRG.127200.3"; exon_number "1"; scaffold_766 StringTie exon 268785 268937 1000 - . gene_id "MSTRG.127200"; transcript_id "MSTRG.127200.3"; exon_number "2"; scaffold_766 StringTie exon 269072 269156 1000 - . gene_id "MSTRG.127200"; transcript_id "MSTRG.127200.3"; exon_number "3"; scaffold_766 StringTie exon 269391 269540 1000 - . gene_id "MSTRG.127200"; transcript_id "MSTRG.127200.3"; exon_number "4"; scaffold_766 StringTie exon 269695 269861 1000 - . gene_id "MSTRG.127200"; transcript_id "MSTRG.127200.3"; exon_number "5"; scaffold_766 StringTie exon 270407 270560 1000 - . gene_id "MSTRG.127200"; transcript_id "MSTRG.127200.3"; exon_number "6"; scaffold_766 StringTie exon 270630 270802 1000 - . gene_id "MSTRG.127200"; transcript_id "MSTRG.127200.3"; exon_number "7"; scaffold_766 StringTie exon 270896 271057 1000 - . gene_id "MSTRG.127200"; transcript_id "MSTRG.127200.3"; exon_number "8"; scaffold_766 StringTie exon 415009 415325 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "1"; scaffold_766 StringTie exon 417800 417928 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "2"; scaffold_766 StringTie exon 418249 418345 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "3"; scaffold_766 StringTie exon 418476 418617 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "4"; scaffold_766 StringTie exon 418741 418797 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "5"; scaffold_766 StringTie exon 418966 419090 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "6"; scaffold_766 StringTie exon 419293 419500 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "7"; scaffold_766 StringTie exon 419614 419760 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "8"; scaffold_766 StringTie exon 419856 419954 1000 + . gene_id "MSTRG.127218"; transcript_id "MSTRG.127218.1"; exon_number "9"; scaffold_7668 StringTie exon 26803 27019 1000 . . gene_id "MSTRG.127263"; transcript_id "MSTRG.127263.1"; exon_number "1"; scaffold_76706 StringTie exon 27 330 1000 . . gene_id "MSTRG.127306"; transcript_id "MSTRG.127306.1"; exon_number "1"; scaffold_7672 StringTie exon 52 308 1000 + . gene_id "MSTRG.127310"; transcript_id "MSTRG.127310.1"; exon_number "1"; scaffold_76768 StringTie exon 22 317 1000 . . gene_id "MSTRG.127332"; transcript_id "MSTRG.127332.1"; exon_number "1"; scaffold_7678 StringTie exon 26546 26763 1000 . . gene_id "MSTRG.127337"; transcript_id "MSTRG.127337.1"; exon_number "1"; scaffold_76794 StringTie exon 1291 1353 1000 + . gene_id "MSTRG.127344"; transcript_id "MSTRG.127344.1"; exon_number "1"; scaffold_76794 StringTie exon 1592 1737 1000 + . gene_id "MSTRG.127344"; transcript_id "MSTRG.127344.1"; exon_number "2"; scaffold_768 StringTie exon 455062 455500 1000 . . gene_id "MSTRG.127374"; transcript_id "MSTRG.127374.1"; exon_number "1"; scaffold_7680 StringTie exon 8995 9277 1000 . . gene_id "MSTRG.127380"; transcript_id "MSTRG.127380.1"; exon_number "1"; scaffold_76811 StringTie exon 718 973 1000 . . gene_id "MSTRG.127389"; transcript_id "MSTRG.127389.1"; exon_number "1"; scaffold_7682 StringTie exon 13541 13764 1000 . . gene_id "MSTRG.127393"; transcript_id "MSTRG.127393.1"; exon_number "1"; scaffold_7688 StringTie exon 12 300 1000 . . gene_id "MSTRG.127419"; transcript_id "MSTRG.127419.1"; exon_number "1"; scaffold_7688 StringTie exon 15418 15697 1000 . . gene_id "MSTRG.127422"; transcript_id "MSTRG.127422.1"; exon_number "1"; scaffold_76886 StringTie exon 1568 1799 1000 . . gene_id "MSTRG.127428"; transcript_id "MSTRG.127428.1"; exon_number "1"; scaffold_76899 StringTie exon 7 246 1000 - . gene_id "MSTRG.127440"; transcript_id "MSTRG.127440.1"; exon_number "1"; scaffold_769 StringTie exon 92076 92484 1000 . . gene_id "MSTRG.127449"; transcript_id "MSTRG.127449.1"; exon_number "1"; scaffold_76919 StringTie exon 1256 1485 1000 . . gene_id "MSTRG.127485"; transcript_id "MSTRG.127485.1"; exon_number "1"; scaffold_7698 StringTie exon 14476 14820 1000 . . gene_id "MSTRG.127525"; transcript_id "MSTRG.127525.1"; exon_number "1"; scaffold_77 StringTie exon 143101 143357 1000 . . gene_id "MSTRG.127545"; transcript_id "MSTRG.127545.1"; exon_number "1"; scaffold_77 StringTie exon 1265333 1265690 1000 . . gene_id "MSTRG.127607"; transcript_id "MSTRG.127607.1"; exon_number "1"; scaffold_77 StringTie exon 1364461 1364689 1000 . . gene_id "MSTRG.127612"; transcript_id "MSTRG.127612.1"; exon_number "1"; scaffold_77 StringTie exon 1666699 1667011 1000 . . gene_id "MSTRG.127623"; transcript_id "MSTRG.127623.1"; exon_number "1"; scaffold_77 StringTie exon 1723190 1723493 1000 . . gene_id "MSTRG.127628"; transcript_id "MSTRG.127628.1"; exon_number "1"; scaffold_770 StringTie exon 195939 196165 1000 . . gene_id "MSTRG.127650"; transcript_id "MSTRG.127650.1"; exon_number "1"; scaffold_7708 StringTie exon 544 857 1000 . . gene_id "MSTRG.127690"; transcript_id "MSTRG.127690.1"; exon_number "1"; scaffold_7711 StringTie exon 23051 23419 1000 . . gene_id "MSTRG.127743"; transcript_id "MSTRG.127743.1"; exon_number "1"; scaffold_77151 StringTie exon 640 905 1000 . . gene_id "MSTRG.127762"; transcript_id "MSTRG.127762.1"; exon_number "1"; scaffold_772 StringTie exon 130541 130881 1000 . . gene_id "MSTRG.127794"; transcript_id "MSTRG.127794.1"; exon_number "1"; scaffold_772 StringTie exon 361471 361966 1000 . . gene_id "MSTRG.127807"; transcript_id "MSTRG.127807.1"; exon_number "1"; scaffold_77209 StringTie exon 344 773 1000 . . gene_id "MSTRG.127815"; transcript_id "MSTRG.127815.1"; exon_number "1"; scaffold_77216 StringTie exon 334 656 1000 . . gene_id "MSTRG.127818"; transcript_id "MSTRG.127818.1"; exon_number "1"; scaffold_7729 StringTie exon 10978 11193 1000 . . gene_id "MSTRG.127841"; transcript_id "MSTRG.127841.1"; exon_number "1"; scaffold_773 StringTie exon 205623 207402 1000 - . gene_id "MSTRG.127866"; transcript_id "MSTRG.127866.1"; exon_number "1"; scaffold_773 StringTie exon 388758 391064 1000 . . gene_id "MSTRG.127879"; transcript_id "MSTRG.127879.1"; exon_number "1"; scaffold_7731 StringTie exon 12881 14330 1000 . . gene_id "MSTRG.127889"; transcript_id "MSTRG.127889.1"; exon_number "1"; scaffold_77338 StringTie exon 1455 1774 1000 . . gene_id "MSTRG.127903"; transcript_id "MSTRG.127903.1"; exon_number "1"; scaffold_774 StringTie exon 353195 353756 1000 . . gene_id "MSTRG.127946"; transcript_id "MSTRG.127946.1"; exon_number "1"; scaffold_77406 StringTie exon 214 544 1000 . . gene_id "MSTRG.127961"; transcript_id "MSTRG.127961.1"; exon_number "1"; scaffold_77406 StringTie exon 1109 1248 1000 - . gene_id "MSTRG.127962"; transcript_id "MSTRG.127962.1"; exon_number "1"; scaffold_77406 StringTie exon 1563 1737 1000 - . gene_id "MSTRG.127962"; transcript_id "MSTRG.127962.1"; exon_number "2"; scaffold_77406 StringTie exon 1892 2008 1000 - . gene_id "MSTRG.127962"; transcript_id "MSTRG.127962.1"; exon_number "3"; scaffold_77466 StringTie exon 1562 1761 1000 . . gene_id "MSTRG.127980"; transcript_id "MSTRG.127980.1"; exon_number "1"; scaffold_775 StringTie exon 137281 139031 1000 . . gene_id "MSTRG.128007"; transcript_id "MSTRG.128007.1"; exon_number "1"; scaffold_775 StringTie exon 201546 201716 1000 + . gene_id "MSTRG.128019"; transcript_id "MSTRG.128019.1"; exon_number "1"; scaffold_775 StringTie exon 202305 202400 1000 + . gene_id "MSTRG.128019"; transcript_id "MSTRG.128019.1"; exon_number "2"; scaffold_775 StringTie exon 202883 202909 1000 + . gene_id "MSTRG.128019"; transcript_id "MSTRG.128019.1"; exon_number "3"; scaffold_775 StringTie exon 250050 250464 1000 . . gene_id "MSTRG.128025"; transcript_id "MSTRG.128025.1"; exon_number "1"; scaffold_7750 StringTie exon 14505 14745 1000 . . gene_id "MSTRG.128040"; transcript_id "MSTRG.128040.1"; exon_number "1"; scaffold_7752 StringTie exon 25037 25354 1000 . . gene_id "MSTRG.128052"; transcript_id "MSTRG.128052.1"; exon_number "1"; scaffold_77535 StringTie exon 129 354 1000 . . gene_id "MSTRG.128058"; transcript_id "MSTRG.128058.1"; exon_number "1"; scaffold_776 StringTie exon 226383 226441 1000 + . gene_id "MSTRG.128107"; transcript_id "MSTRG.128107.1"; exon_number "1"; scaffold_776 StringTie exon 227943 228209 1000 + . gene_id "MSTRG.128107"; transcript_id "MSTRG.128107.1"; exon_number "2"; scaffold_776 StringTie exon 494609 494820 1000 . . gene_id "MSTRG.128136"; transcript_id "MSTRG.128136.1"; exon_number "1"; scaffold_7768 StringTie exon 7225 7586 1000 . . gene_id "MSTRG.128160"; transcript_id "MSTRG.128160.1"; exon_number "1"; scaffold_777 StringTie exon 226250 226473 1000 . . gene_id "MSTRG.128186"; transcript_id "MSTRG.128186.1"; exon_number "1"; scaffold_777 StringTie exon 393733 394115 1000 . . gene_id "MSTRG.128196"; transcript_id "MSTRG.128196.1"; exon_number "1"; scaffold_777 StringTie exon 441579 441879 1000 . . gene_id "MSTRG.128202"; transcript_id "MSTRG.128202.1"; exon_number "1"; scaffold_77709 StringTie exon 683 1261 1000 . . gene_id "MSTRG.128211"; transcript_id "MSTRG.128211.1"; exon_number "1"; scaffold_778 StringTie exon 457113 457443 1000 . . gene_id "MSTRG.128281"; transcript_id "MSTRG.128281.1"; exon_number "1"; scaffold_7786 StringTie exon 12170 12507 1000 . . gene_id "MSTRG.128301"; transcript_id "MSTRG.128301.1"; exon_number "1"; scaffold_7787 StringTie exon 17370 17668 1000 . . gene_id "MSTRG.128307"; transcript_id "MSTRG.128307.1"; exon_number "1"; scaffold_77894 StringTie exon 789 1034 1000 . . gene_id "MSTRG.128321"; transcript_id "MSTRG.128321.1"; exon_number "1"; scaffold_77895 StringTie exon 72 177 1000 + . gene_id "MSTRG.128322"; transcript_id "MSTRG.128322.1"; exon_number "1"; scaffold_77895 StringTie exon 589 689 1000 + . gene_id "MSTRG.128322"; transcript_id "MSTRG.128322.1"; exon_number "2"; scaffold_77895 StringTie exon 1069 1315 1000 + . gene_id "MSTRG.128322"; transcript_id "MSTRG.128322.1"; exon_number "3"; scaffold_779 StringTie exon 102383 102547 1000 + . gene_id "MSTRG.128327"; transcript_id "MSTRG.128327.1"; exon_number "1"; scaffold_779 StringTie exon 103223 103283 1000 + . gene_id "MSTRG.128327"; transcript_id "MSTRG.128327.1"; exon_number "2"; scaffold_779 StringTie exon 103481 103604 1000 + . gene_id "MSTRG.128327"; transcript_id "MSTRG.128327.1"; exon_number "3"; scaffold_779 StringTie exon 360389 360454 1000 + . gene_id "MSTRG.128348"; transcript_id "MSTRG.128348.3"; exon_number "1"; scaffold_779 StringTie exon 361368 361466 1000 + . gene_id "MSTRG.128348"; transcript_id "MSTRG.128348.3"; exon_number "2"; scaffold_779 StringTie exon 363110 363292 1000 + . gene_id "MSTRG.128348"; transcript_id "MSTRG.128348.3"; exon_number "3"; scaffold_779 StringTie exon 474922 474962 1000 + . gene_id "MSTRG.128358"; transcript_id "MSTRG.128358.1"; exon_number "1"; scaffold_779 StringTie exon 475354 475492 1000 + . gene_id "MSTRG.128358"; transcript_id "MSTRG.128358.1"; exon_number "2"; scaffold_779 StringTie exon 475975 476097 1000 + . gene_id "MSTRG.128358"; transcript_id "MSTRG.128358.1"; exon_number "3"; scaffold_779 StringTie exon 476274 476369 1000 + . gene_id "MSTRG.128358"; transcript_id "MSTRG.128358.1"; exon_number "4"; scaffold_779 StringTie exon 475097 475312 1000 . . gene_id "MSTRG.128359"; transcript_id "MSTRG.128359.1"; exon_number "1"; scaffold_7791 StringTie exon 17487 17728 1000 . . gene_id "MSTRG.128373"; transcript_id "MSTRG.128373.1"; exon_number "1"; scaffold_78 StringTie exon 3530 3826 1000 . . gene_id "MSTRG.128419"; transcript_id "MSTRG.128419.1"; exon_number "1"; scaffold_78 StringTie exon 209498 209956 1000 . . gene_id "MSTRG.128443"; transcript_id "MSTRG.128443.1"; exon_number "1"; scaffold_78 StringTie exon 565710 566002 1000 . . gene_id "MSTRG.128458"; transcript_id "MSTRG.128458.1"; exon_number "1"; scaffold_78 StringTie exon 662892 663177 1000 . . gene_id "MSTRG.128464"; transcript_id "MSTRG.128464.1"; exon_number "1"; scaffold_78 StringTie exon 838229 838446 1000 . . gene_id "MSTRG.128477"; transcript_id "MSTRG.128477.1"; exon_number "1"; scaffold_78 StringTie exon 1371621 1372012 1000 . . gene_id "MSTRG.128515"; transcript_id "MSTRG.128515.1"; exon_number "1"; scaffold_78 StringTie exon 1459305 1459685 1000 . . gene_id "MSTRG.128528"; transcript_id "MSTRG.128528.1"; exon_number "1"; scaffold_780 StringTie exon 105686 106020 1000 . . gene_id "MSTRG.128563"; transcript_id "MSTRG.128563.1"; exon_number "1"; scaffold_780 StringTie exon 360870 361309 1000 . . gene_id "MSTRG.128577"; transcript_id "MSTRG.128577.1"; exon_number "1"; scaffold_78012 StringTie exon 540 764 1000 - . gene_id "MSTRG.128587"; transcript_id "MSTRG.128587.1"; exon_number "1"; scaffold_78012 StringTie exon 1416 1460 1000 - . gene_id "MSTRG.128587"; transcript_id "MSTRG.128587.1"; exon_number "2"; scaffold_7802 StringTie exon 9996 10212 1000 . . gene_id "MSTRG.128592"; transcript_id "MSTRG.128592.1"; exon_number "1"; scaffold_78091 StringTie exon 1082 1313 1000 . . gene_id "MSTRG.128624"; transcript_id "MSTRG.128624.1"; exon_number "1"; scaffold_781 StringTie exon 290560 290908 1000 . . gene_id "MSTRG.128641"; transcript_id "MSTRG.128641.1"; exon_number "1"; scaffold_781 StringTie exon 321700 322075 1000 - . gene_id "MSTRG.128647"; transcript_id "MSTRG.128647.1"; exon_number "1"; scaffold_7812 StringTie exon 28053 29406 1000 . . gene_id "MSTRG.128667"; transcript_id "MSTRG.128667.1"; exon_number "1"; scaffold_7813 StringTie exon 29309 29639 1000 + . gene_id "MSTRG.128670"; transcript_id "MSTRG.128670.1"; exon_number "1"; scaffold_78176 StringTie exon 1488 1693 1000 . . gene_id "MSTRG.128689"; transcript_id "MSTRG.128689.1"; exon_number "1"; scaffold_78190 StringTie exon 1690 1996 1000 . . gene_id "MSTRG.128697"; transcript_id "MSTRG.128697.1"; exon_number "1"; scaffold_782 StringTie exon 315127 315444 1000 . . gene_id "MSTRG.128722"; transcript_id "MSTRG.128722.1"; exon_number "1"; scaffold_7821 StringTie exon 28208 28481 1000 . . gene_id "MSTRG.128739"; transcript_id "MSTRG.128739.1"; exon_number "1"; scaffold_78216 StringTie exon 429 788 1000 . . gene_id "MSTRG.128741"; transcript_id "MSTRG.128741.1"; exon_number "1"; scaffold_7823 StringTie exon 27708 28684 1000 - . gene_id "MSTRG.128749"; transcript_id "MSTRG.128749.1"; exon_number "1"; scaffold_7823 StringTie exon 28773 28877 1000 - . gene_id "MSTRG.128749"; transcript_id "MSTRG.128749.1"; exon_number "2"; scaffold_7823 StringTie exon 29374 29455 1000 - . gene_id "MSTRG.128749"; transcript_id "MSTRG.128749.1"; exon_number "3"; scaffold_7823 StringTie exon 29542 29601 1000 - . gene_id "MSTRG.128749"; transcript_id "MSTRG.128749.1"; exon_number "4"; scaffold_78237 StringTie exon 759 1149 1000 . . gene_id "MSTRG.128752"; transcript_id "MSTRG.128752.1"; exon_number "1"; scaffold_78278 StringTie exon 1040 1415 1000 . . gene_id "MSTRG.128766"; transcript_id "MSTRG.128766.1"; exon_number "1"; scaffold_7828 StringTie exon 27896 28406 1000 . . gene_id "MSTRG.128767"; transcript_id "MSTRG.128767.1"; exon_number "1"; scaffold_7829 StringTie exon 27124 27493 1000 . . gene_id "MSTRG.128775"; transcript_id "MSTRG.128775.1"; exon_number "1"; scaffold_783 StringTie exon 201531 201840 1000 . . gene_id "MSTRG.128789"; transcript_id "MSTRG.128789.1"; exon_number "1"; scaffold_783 StringTie exon 286853 287059 1000 . . gene_id "MSTRG.128793"; transcript_id "MSTRG.128793.1"; exon_number "1"; scaffold_783 StringTie exon 458770 459043 1000 . . gene_id "MSTRG.128801"; transcript_id "MSTRG.128801.1"; exon_number "1"; scaffold_78367 StringTie exon 1251 1655 1000 . . gene_id "MSTRG.128836"; transcript_id "MSTRG.128836.1"; exon_number "1"; scaffold_7839 StringTie exon 19795 20808 1000 - . gene_id "MSTRG.128847"; transcript_id "MSTRG.128847.1"; exon_number "1"; scaffold_7839 StringTie exon 21420 21734 1000 - . gene_id "MSTRG.128847"; transcript_id "MSTRG.128847.1"; exon_number "2"; scaffold_78390 StringTie exon 389 625 1000 . . gene_id "MSTRG.128849"; transcript_id "MSTRG.128849.1"; exon_number "1"; scaffold_784 StringTie exon 30483 30914 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "1"; scaffold_784 StringTie exon 32460 32689 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "2"; scaffold_784 StringTie exon 32912 33104 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "3"; scaffold_784 StringTie exon 33280 33384 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "4"; scaffold_784 StringTie exon 33480 33626 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "5"; scaffold_784 StringTie exon 33741 33948 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "6"; scaffold_784 StringTie exon 34152 34276 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "7"; scaffold_784 StringTie exon 34454 34510 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "8"; scaffold_784 StringTie exon 34642 34783 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "9"; scaffold_784 StringTie exon 34912 35008 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "10"; scaffold_784 StringTie exon 35371 35499 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "11"; scaffold_784 StringTie exon 37887 38338 1000 - . gene_id "MSTRG.128856"; transcript_id "MSTRG.128856.1"; exon_number "12"; scaffold_784 StringTie exon 240774 241015 1000 . . gene_id "MSTRG.128871"; transcript_id "MSTRG.128871.1"; exon_number "1"; scaffold_784 StringTie exon 242425 242727 1000 + . gene_id "MSTRG.128872"; transcript_id "MSTRG.128872.1"; exon_number "1"; scaffold_784 StringTie exon 268559 268572 1000 + . gene_id "MSTRG.128872"; transcript_id "MSTRG.128872.1"; exon_number "2"; scaffold_784 StringTie exon 262835 263091 1000 . . gene_id "MSTRG.128875"; transcript_id "MSTRG.128875.1"; exon_number "1"; scaffold_784 StringTie exon 322256 322283 1000 - . gene_id "MSTRG.128885"; transcript_id "MSTRG.128885.1"; exon_number "1"; scaffold_784 StringTie exon 322510 322643 1000 - . gene_id "MSTRG.128885"; transcript_id "MSTRG.128885.1"; exon_number "2"; scaffold_784 StringTie exon 324112 324150 1000 - . gene_id "MSTRG.128885"; transcript_id "MSTRG.128885.1"; exon_number "3"; scaffold_784 StringTie exon 324279 324670 1000 - . gene_id "MSTRG.128885"; transcript_id "MSTRG.128885.1"; exon_number "4"; scaffold_784 StringTie exon 341362 341677 1000 . . gene_id "MSTRG.128889"; transcript_id "MSTRG.128889.1"; exon_number "1"; scaffold_784 StringTie exon 357480 357695 1000 . . gene_id "MSTRG.128892"; transcript_id "MSTRG.128892.1"; exon_number "1"; scaffold_784 StringTie exon 401521 401635 1000 + . gene_id "MSTRG.128897"; transcript_id "MSTRG.128897.1"; exon_number "1"; scaffold_784 StringTie exon 401915 402035 1000 + . gene_id "MSTRG.128897"; transcript_id "MSTRG.128897.1"; exon_number "2"; scaffold_784 StringTie exon 402273 402306 1000 + . gene_id "MSTRG.128897"; transcript_id "MSTRG.128897.1"; exon_number "3"; scaffold_784 StringTie exon 434713 434991 1000 . . gene_id "MSTRG.128902"; transcript_id "MSTRG.128902.1"; exon_number "1"; scaffold_78457 StringTie exon 930 1072 1000 + . gene_id "MSTRG.128935"; transcript_id "MSTRG.128935.2"; exon_number "1"; scaffold_78457 StringTie exon 1094 1403 1000 + . gene_id "MSTRG.128935"; transcript_id "MSTRG.128935.2"; exon_number "2"; scaffold_7846 StringTie exon 27773 27987 1000 . . gene_id "MSTRG.128938"; transcript_id "MSTRG.128938.1"; exon_number "1"; scaffold_78476 StringTie exon 1553 1840 1000 . . gene_id "MSTRG.128946"; transcript_id "MSTRG.128946.1"; exon_number "1"; scaffold_785 StringTie exon 167598 167822 1000 . . gene_id "MSTRG.128965"; transcript_id "MSTRG.128965.1"; exon_number "1"; scaffold_785 StringTie exon 266007 266229 1000 . . gene_id "MSTRG.128973"; transcript_id "MSTRG.128973.1"; exon_number "1"; scaffold_785 StringTie exon 299420 300208 1000 - . gene_id "MSTRG.128975"; transcript_id "MSTRG.128975.1"; exon_number "1"; scaffold_785 StringTie exon 300293 300453 1000 - . gene_id "MSTRG.128975"; transcript_id "MSTRG.128975.1"; exon_number "2"; scaffold_785 StringTie exon 302078 302349 1000 - . gene_id "MSTRG.128975"; transcript_id "MSTRG.128975.1"; exon_number "3"; scaffold_785 StringTie exon 314612 314691 1000 - . gene_id "MSTRG.128975"; transcript_id "MSTRG.128975.1"; exon_number "4"; scaffold_785 StringTie exon 314878 314980 1000 - . gene_id "MSTRG.128975"; transcript_id "MSTRG.128975.1"; exon_number "5"; scaffold_785 StringTie exon 393530 393596 1000 + . gene_id "MSTRG.128983"; transcript_id "MSTRG.128983.1"; exon_number "1"; scaffold_785 StringTie exon 393801 394705 1000 + . gene_id "MSTRG.128983"; transcript_id "MSTRG.128983.1"; exon_number "2"; scaffold_78587 StringTie exon 835 1235 1000 + . gene_id "MSTRG.129033"; transcript_id "MSTRG.129033.1"; exon_number "1"; scaffold_78587 StringTie exon 1567 1714 1000 + . gene_id "MSTRG.129033"; transcript_id "MSTRG.129033.1"; exon_number "2"; scaffold_786 StringTie exon 283252 283493 1000 . . gene_id "MSTRG.129063"; transcript_id "MSTRG.129063.1"; exon_number "1"; scaffold_786 StringTie exon 442938 443193 1000 . . gene_id "MSTRG.129092"; transcript_id "MSTRG.129092.1"; exon_number "1"; scaffold_787 StringTie exon 17205 17331 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "1"; scaffold_787 StringTie exon 18077 18191 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "2"; scaffold_787 StringTie exon 18450 18645 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "3"; scaffold_787 StringTie exon 18934 19120 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "4"; scaffold_787 StringTie exon 19824 19985 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "5"; scaffold_787 StringTie exon 20980 21076 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "6"; scaffold_787 StringTie exon 21202 21370 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "7"; scaffold_787 StringTie exon 21520 21652 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "8"; scaffold_787 StringTie exon 22560 22744 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "9"; scaffold_787 StringTie exon 23345 23995 1000 + . gene_id "MSTRG.129137"; transcript_id "MSTRG.129137.1"; exon_number "10"; scaffold_787 StringTie exon 38230 38459 1000 . . gene_id "MSTRG.129138"; transcript_id "MSTRG.129138.1"; exon_number "1"; scaffold_787 StringTie exon 77358 77801 1000 . . gene_id "MSTRG.129140"; transcript_id "MSTRG.129140.1"; exon_number "1"; scaffold_787 StringTie exon 271884 271941 1000 - . gene_id "MSTRG.129157"; transcript_id "MSTRG.129157.1"; exon_number "1"; scaffold_787 StringTie exon 272051 272130 1000 - . gene_id "MSTRG.129157"; transcript_id "MSTRG.129157.1"; exon_number "2"; scaffold_787 StringTie exon 272319 272412 1000 - . gene_id "MSTRG.129157"; transcript_id "MSTRG.129157.1"; exon_number "3"; scaffold_787 StringTie exon 471415 471785 1000 - . gene_id "MSTRG.129165"; transcript_id "MSTRG.129165.1"; exon_number "1"; scaffold_787 StringTie exon 472453 472500 1000 - . gene_id "MSTRG.129165"; transcript_id "MSTRG.129165.1"; exon_number "2"; scaffold_787 StringTie exon 477473 477511 1000 - . gene_id "MSTRG.129165"; transcript_id "MSTRG.129165.1"; exon_number "3"; scaffold_78714 StringTie exon 321 658 1000 . . gene_id "MSTRG.129175"; transcript_id "MSTRG.129175.1"; exon_number "1"; scaffold_78753 StringTie exon 1801 2004 1000 . . gene_id "MSTRG.129189"; transcript_id "MSTRG.129189.1"; exon_number "1"; scaffold_7880 StringTie exon 12455 12692 1000 . . gene_id "MSTRG.129242"; transcript_id "MSTRG.129242.1"; exon_number "1"; scaffold_78800 StringTie exon 1036 1256 1000 . . gene_id "MSTRG.129245"; transcript_id "MSTRG.129245.1"; exon_number "1"; scaffold_7884 StringTie exon 25836 26182 1000 . . gene_id "MSTRG.129270"; transcript_id "MSTRG.129270.1"; exon_number "1"; scaffold_78885 StringTie exon 873 1191 1000 . . gene_id "MSTRG.129286"; transcript_id "MSTRG.129286.1"; exon_number "1"; scaffold_789 StringTie exon 210314 210888 1000 . . gene_id "MSTRG.129298"; transcript_id "MSTRG.129298.1"; exon_number "1"; scaffold_789 StringTie exon 460181 460421 1000 . . gene_id "MSTRG.129312"; transcript_id "MSTRG.129312.1"; exon_number "1"; scaffold_7891 StringTie exon 18437 18980 1000 . . gene_id "MSTRG.129323"; transcript_id "MSTRG.129323.1"; exon_number "1"; scaffold_7891 StringTie exon 27837 28081 1000 . . gene_id "MSTRG.129324"; transcript_id "MSTRG.129324.1"; exon_number "1"; scaffold_7894 StringTie exon 17368 17645 1000 . . gene_id "MSTRG.129337"; transcript_id "MSTRG.129337.1"; exon_number "1"; scaffold_78971 StringTie exon 829 1763 1000 . . gene_id "MSTRG.129350"; transcript_id "MSTRG.129350.1"; exon_number "1"; scaffold_78988 StringTie exon 1298 1612 1000 . . gene_id "MSTRG.129355"; transcript_id "MSTRG.129355.1"; exon_number "1"; scaffold_7899 StringTie exon 1 656 1000 . . gene_id "MSTRG.129357"; transcript_id "MSTRG.129357.1"; exon_number "1"; scaffold_79 StringTie exon 45853 45864 1000 + . gene_id "MSTRG.129371"; transcript_id "MSTRG.129371.1"; exon_number "1"; scaffold_79 StringTie exon 45969 46043 1000 + . gene_id "MSTRG.129371"; transcript_id "MSTRG.129371.1"; exon_number "2"; scaffold_79 StringTie exon 46188 46307 1000 + . gene_id "MSTRG.129371"; transcript_id "MSTRG.129371.1"; exon_number "3"; scaffold_79 StringTie exon 184148 184366 1000 . . gene_id "MSTRG.129382"; transcript_id "MSTRG.129382.1"; exon_number "1"; scaffold_79 StringTie exon 202536 202938 1000 . . gene_id "MSTRG.129384"; transcript_id "MSTRG.129384.1"; exon_number "1"; scaffold_79 StringTie exon 223221 223452 1000 . . gene_id "MSTRG.129389"; transcript_id "MSTRG.129389.1"; exon_number "1"; scaffold_79 StringTie exon 377855 378820 1000 . . gene_id "MSTRG.129400"; transcript_id "MSTRG.129400.1"; exon_number "1"; scaffold_79 StringTie exon 403585 404098 1000 . . gene_id "MSTRG.129405"; transcript_id "MSTRG.129405.1"; exon_number "1"; scaffold_79 StringTie exon 643421 643620 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "1"; scaffold_79 StringTie exon 644369 644649 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "2"; scaffold_79 StringTie exon 644809 644908 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "3"; scaffold_79 StringTie exon 645057 645158 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "4"; scaffold_79 StringTie exon 646365 646705 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "5"; scaffold_79 StringTie exon 646809 646967 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "6"; scaffold_79 StringTie exon 647238 647361 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "7"; scaffold_79 StringTie exon 647573 647658 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "8"; scaffold_79 StringTie exon 647952 648047 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "9"; scaffold_79 StringTie exon 648159 648298 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "10"; scaffold_79 StringTie exon 651601 651672 1000 + . gene_id "MSTRG.129422"; transcript_id "MSTRG.129422.1"; exon_number "11"; scaffold_79 StringTie exon 999632 999918 1000 . . gene_id "MSTRG.129443"; transcript_id "MSTRG.129443.1"; exon_number "1"; scaffold_79 StringTie exon 1462125 1462528 1000 . . gene_id "MSTRG.129469"; transcript_id "MSTRG.129469.1"; exon_number "1"; scaffold_79 StringTie exon 1546025 1546134 1000 - . gene_id "MSTRG.129478"; transcript_id "MSTRG.129478.1"; exon_number "1"; scaffold_79 StringTie exon 1547286 1547365 1000 - . gene_id "MSTRG.129478"; transcript_id "MSTRG.129478.1"; exon_number "2"; scaffold_79 StringTie exon 1550069 1550145 1000 - . gene_id "MSTRG.129478"; transcript_id "MSTRG.129478.1"; exon_number "3"; scaffold_79 StringTie exon 1550647 1550850 1000 - . gene_id "MSTRG.129478"; transcript_id "MSTRG.129478.1"; exon_number "4"; scaffold_79 StringTie exon 1551016 1551125 1000 - . gene_id "MSTRG.129478"; transcript_id "MSTRG.129478.1"; exon_number "5"; scaffold_79 StringTie exon 1557088 1558253 1000 - . gene_id "MSTRG.129478"; transcript_id "MSTRG.129478.1"; exon_number "6"; scaffold_79 StringTie exon 1609632 1610331 1000 - . gene_id "MSTRG.129480"; transcript_id "MSTRG.129480.1"; exon_number "1"; scaffold_79 StringTie exon 1610492 1610598 1000 - . gene_id "MSTRG.129480"; transcript_id "MSTRG.129480.1"; exon_number "2"; scaffold_79 StringTie exon 1610924 1610993 1000 - . gene_id "MSTRG.129480"; transcript_id "MSTRG.129480.1"; exon_number "3"; scaffold_79 StringTie exon 1611079 1611187 1000 - . gene_id "MSTRG.129480"; transcript_id "MSTRG.129480.1"; exon_number "4"; scaffold_79 StringTie exon 1612465 1612629 1000 - . gene_id "MSTRG.129480"; transcript_id "MSTRG.129480.1"; exon_number "5"; scaffold_790 StringTie exon 220004 220457 1000 . . gene_id "MSTRG.129503"; transcript_id "MSTRG.129503.1"; exon_number "1"; scaffold_790 StringTie exon 237624 237875 1000 . . gene_id "MSTRG.129510"; transcript_id "MSTRG.129510.1"; exon_number "1"; scaffold_790 StringTie exon 367301 367553 1000 . . gene_id "MSTRG.129527"; transcript_id "MSTRG.129527.1"; exon_number "1"; scaffold_7900 StringTie exon 28438 28654 1000 . . gene_id "MSTRG.129532"; transcript_id "MSTRG.129532.1"; exon_number "1"; scaffold_79028 StringTie exon 37 261 1000 . . gene_id "MSTRG.129543"; transcript_id "MSTRG.129543.1"; exon_number "1"; scaffold_7907 StringTie exon 477 877 1000 - . gene_id "MSTRG.129562"; transcript_id "MSTRG.129562.1"; exon_number "1"; scaffold_7907 StringTie exon 5984 6178 1000 - . gene_id "MSTRG.129562"; transcript_id "MSTRG.129562.1"; exon_number "2"; scaffold_7907 StringTie exon 9113 9583 1000 . . gene_id "MSTRG.129564"; transcript_id "MSTRG.129564.1"; exon_number "1"; scaffold_791 StringTie exon 177312 178368 1000 . . gene_id "MSTRG.129598"; transcript_id "MSTRG.129598.1"; exon_number "1"; scaffold_791 StringTie exon 279515 279765 1000 + . gene_id "MSTRG.129608"; transcript_id "MSTRG.129608.1"; exon_number "1"; scaffold_791 StringTie exon 280660 280761 1000 + . gene_id "MSTRG.129609"; transcript_id "MSTRG.129609.1"; exon_number "1"; scaffold_791 StringTie exon 283678 283857 1000 + . gene_id "MSTRG.129609"; transcript_id "MSTRG.129609.1"; exon_number "2"; scaffold_791 StringTie exon 288001 288093 1000 + . gene_id "MSTRG.129609"; transcript_id "MSTRG.129609.1"; exon_number "3"; scaffold_791 StringTie exon 288215 288358 1000 + . gene_id "MSTRG.129609"; transcript_id "MSTRG.129609.1"; exon_number "4"; scaffold_791 StringTie exon 289993 290033 1000 + . gene_id "MSTRG.129609"; transcript_id "MSTRG.129609.1"; exon_number "5"; scaffold_791 StringTie exon 290160 290232 1000 + . gene_id "MSTRG.129609"; transcript_id "MSTRG.129609.1"; exon_number "6"; scaffold_791 StringTie exon 290367 291630 1000 + . gene_id "MSTRG.129609"; transcript_id "MSTRG.129609.1"; exon_number "7"; scaffold_791 StringTie exon 301629 301979 1000 . . gene_id "MSTRG.129611"; transcript_id "MSTRG.129611.1"; exon_number "1"; scaffold_7913 StringTie exon 6208 6673 1000 . . gene_id "MSTRG.129644"; transcript_id "MSTRG.129644.1"; exon_number "1"; scaffold_79142 StringTie exon 1537 1744 1000 . . gene_id "MSTRG.129652"; transcript_id "MSTRG.129652.1"; exon_number "1"; scaffold_7915 StringTie exon 20810 21035 1000 . . gene_id "MSTRG.129654"; transcript_id "MSTRG.129654.1"; exon_number "1"; scaffold_7916 StringTie exon 2837 3117 1000 . . gene_id "MSTRG.129660"; transcript_id "MSTRG.129660.1"; exon_number "1"; scaffold_79197 StringTie exon 1506 1755 1000 . . gene_id "MSTRG.129683"; transcript_id "MSTRG.129683.1"; exon_number "1"; scaffold_792 StringTie exon 158256 158673 1000 . . gene_id "MSTRG.129688"; transcript_id "MSTRG.129688.1"; exon_number "1"; scaffold_792 StringTie exon 322317 324739 1000 . . gene_id "MSTRG.129696"; transcript_id "MSTRG.129696.1"; exon_number "1"; scaffold_792 StringTie exon 385472 385684 1000 . . gene_id "MSTRG.129702"; transcript_id "MSTRG.129702.1"; exon_number "1"; scaffold_792 StringTie exon 440197 440477 1000 . . gene_id "MSTRG.129709"; transcript_id "MSTRG.129709.1"; exon_number "1"; scaffold_7921 StringTie exon 104 368 1000 . . gene_id "MSTRG.129717"; transcript_id "MSTRG.129717.1"; exon_number "1"; scaffold_79224 StringTie exon 51 220 1000 - . gene_id "MSTRG.129725"; transcript_id "MSTRG.129725.1"; exon_number "1"; scaffold_79224 StringTie exon 781 851 1000 - . gene_id "MSTRG.129725"; transcript_id "MSTRG.129725.1"; exon_number "2"; scaffold_793 StringTie exon 25229 25481 1000 . . gene_id "MSTRG.129763"; transcript_id "MSTRG.129763.1"; exon_number "1"; scaffold_7930 StringTie exon 2406 2636 1000 . . gene_id "MSTRG.129800"; transcript_id "MSTRG.129800.1"; exon_number "1"; scaffold_79347 StringTie exon 1018 1218 1000 . . gene_id "MSTRG.129821"; transcript_id "MSTRG.129821.1"; exon_number "1"; scaffold_79355 StringTie exon 300 390 1000 - . gene_id "MSTRG.129824"; transcript_id "MSTRG.129824.1"; exon_number "1"; scaffold_79355 StringTie exon 623 855 1000 - . gene_id "MSTRG.129824"; transcript_id "MSTRG.129824.1"; exon_number "2"; scaffold_794 StringTie exon 259937 260140 1000 . . gene_id "MSTRG.129869"; transcript_id "MSTRG.129869.1"; exon_number "1"; scaffold_794 StringTie exon 273348 273741 1000 . . gene_id "MSTRG.129872"; transcript_id "MSTRG.129872.1"; exon_number "1"; scaffold_794 StringTie exon 295271 295489 1000 . . gene_id "MSTRG.129874"; transcript_id "MSTRG.129874.1"; exon_number "1"; scaffold_794 StringTie exon 345225 345374 1000 - . gene_id "MSTRG.129885"; transcript_id "MSTRG.129885.1"; exon_number "1"; scaffold_794 StringTie exon 345644 345712 1000 - . gene_id "MSTRG.129885"; transcript_id "MSTRG.129885.1"; exon_number "2"; scaffold_794 StringTie exon 346013 346107 1000 - . gene_id "MSTRG.129885"; transcript_id "MSTRG.129885.1"; exon_number "3"; scaffold_794 StringTie exon 346604 346716 1000 - . gene_id "MSTRG.129885"; transcript_id "MSTRG.129885.1"; exon_number "4"; scaffold_794 StringTie exon 353786 353859 1000 - . gene_id "MSTRG.129885"; transcript_id "MSTRG.129885.1"; exon_number "5"; scaffold_794 StringTie exon 408049 408088 1000 - . gene_id "MSTRG.129894"; transcript_id "MSTRG.129894.1"; exon_number "1"; scaffold_794 StringTie exon 412805 412870 1000 - . gene_id "MSTRG.129894"; transcript_id "MSTRG.129894.1"; exon_number "2"; scaffold_794 StringTie exon 413127 413339 1000 - . gene_id "MSTRG.129894"; transcript_id "MSTRG.129894.1"; exon_number "3"; scaffold_794 StringTie exon 433225 433443 1000 . . gene_id "MSTRG.129897"; transcript_id "MSTRG.129897.1"; exon_number "1"; scaffold_7940 StringTie exon 8782 9019 1000 . . gene_id "MSTRG.129902"; transcript_id "MSTRG.129902.1"; exon_number "1"; scaffold_7942 StringTie exon 24604 24806 1000 . . gene_id "MSTRG.129916"; transcript_id "MSTRG.129916.1"; exon_number "1"; scaffold_79460 StringTie exon 722 940 1000 . . gene_id "MSTRG.129931"; transcript_id "MSTRG.129931.1"; exon_number "1"; scaffold_795 StringTie exon 128934 129182 1000 . . gene_id "MSTRG.129964"; transcript_id "MSTRG.129964.1"; exon_number "1"; scaffold_795 StringTie exon 191271 191591 1000 . . gene_id "MSTRG.129967"; transcript_id "MSTRG.129967.1"; exon_number "1"; scaffold_795 StringTie exon 271394 271661 1000 . . gene_id "MSTRG.129971"; transcript_id "MSTRG.129971.1"; exon_number "1"; scaffold_795 StringTie exon 360120 360775 1000 . . gene_id "MSTRG.129974"; transcript_id "MSTRG.129974.1"; exon_number "1"; scaffold_7954 StringTie exon 1660 1998 1000 . . gene_id "MSTRG.130012"; transcript_id "MSTRG.130012.1"; exon_number "1"; scaffold_79541 StringTie exon 826 1140 1000 . . gene_id "MSTRG.130014"; transcript_id "MSTRG.130014.1"; exon_number "1"; scaffold_7958 StringTie exon 14916 15192 1000 . . gene_id "MSTRG.130031"; transcript_id "MSTRG.130031.1"; exon_number "1"; scaffold_7958 StringTie exon 26659 26908 1000 . . gene_id "MSTRG.130033"; transcript_id "MSTRG.130033.1"; exon_number "1"; scaffold_796 StringTie exon 685 1002 1000 . . gene_id "MSTRG.130040"; transcript_id "MSTRG.130040.1"; exon_number "1"; scaffold_796 StringTie exon 26907 27155 1000 . . gene_id "MSTRG.130045"; transcript_id "MSTRG.130045.1"; exon_number "1"; scaffold_796 StringTie exon 170455 170804 1000 + . gene_id "MSTRG.130054"; transcript_id "MSTRG.130054.1"; exon_number "1"; scaffold_796 StringTie exon 171116 171249 1000 + . gene_id "MSTRG.130054"; transcript_id "MSTRG.130054.1"; exon_number "2"; scaffold_796 StringTie exon 171387 171472 1000 + . gene_id "MSTRG.130054"; transcript_id "MSTRG.130054.1"; exon_number "3"; scaffold_796 StringTie exon 171791 171884 1000 + . gene_id "MSTRG.130054"; transcript_id "MSTRG.130054.1"; exon_number "4"; scaffold_796 StringTie exon 451306 451530 1000 . . gene_id "MSTRG.130087"; transcript_id "MSTRG.130087.1"; exon_number "1"; scaffold_796 StringTie exon 480915 481251 1000 . . gene_id "MSTRG.130089"; transcript_id "MSTRG.130089.1"; exon_number "1"; scaffold_79601 StringTie exon 1406 1669 1000 . . gene_id "MSTRG.130100"; transcript_id "MSTRG.130100.1"; exon_number "1"; scaffold_7962 StringTie exon 6895 7278 1000 . . gene_id "MSTRG.130110"; transcript_id "MSTRG.130110.1"; exon_number "1"; scaffold_7962 StringTie exon 17689 17699 1000 - . gene_id "MSTRG.130111"; transcript_id "MSTRG.130111.1"; exon_number "1"; scaffold_7962 StringTie exon 18305 18377 1000 - . gene_id "MSTRG.130111"; transcript_id "MSTRG.130111.1"; exon_number "2"; scaffold_7962 StringTie exon 24921 25189 1000 - . gene_id "MSTRG.130111"; transcript_id "MSTRG.130111.1"; exon_number "3"; scaffold_79655 StringTie exon 503 1995 1000 . . gene_id "MSTRG.130127"; transcript_id "MSTRG.130127.1"; exon_number "1"; scaffold_79669 StringTie exon 909 1111 1000 . . gene_id "MSTRG.130133"; transcript_id "MSTRG.130133.1"; exon_number "1"; scaffold_797 StringTie exon 109024 109235 1000 . . gene_id "MSTRG.130150"; transcript_id "MSTRG.130150.1"; exon_number "1"; scaffold_797 StringTie exon 377947 379715 1000 - . gene_id "MSTRG.130164"; transcript_id "MSTRG.130164.1"; exon_number "1"; scaffold_797 StringTie exon 408395 408612 1000 . . gene_id "MSTRG.130167"; transcript_id "MSTRG.130167.1"; exon_number "1"; scaffold_79718 StringTie exon 1517 1768 1000 . . gene_id "MSTRG.130182"; transcript_id "MSTRG.130182.1"; exon_number "1"; scaffold_79722 StringTie exon 689 879 1000 + . gene_id "MSTRG.130183"; transcript_id "MSTRG.130183.1"; exon_number "1"; scaffold_79722 StringTie exon 928 1030 1000 + . gene_id "MSTRG.130183"; transcript_id "MSTRG.130183.1"; exon_number "2"; scaffold_79794 StringTie exon 1461 1988 1000 . . gene_id "MSTRG.130212"; transcript_id "MSTRG.130212.1"; exon_number "1"; scaffold_798 StringTie exon 119984 120232 1000 . . gene_id "MSTRG.130216"; transcript_id "MSTRG.130216.1"; exon_number "1"; scaffold_798 StringTie exon 353345 353695 1000 . . gene_id "MSTRG.130223"; transcript_id "MSTRG.130223.1"; exon_number "1"; scaffold_7980 StringTie exon 8684 8909 1000 . . gene_id "MSTRG.130231"; transcript_id "MSTRG.130231.1"; exon_number "1"; scaffold_7985 StringTie exon 28296 28753 1000 . . gene_id "MSTRG.130252"; transcript_id "MSTRG.130252.1"; exon_number "1"; scaffold_799 StringTie exon 54079 54448 1000 . . gene_id "MSTRG.130277"; transcript_id "MSTRG.130277.1"; exon_number "1"; scaffold_799 StringTie exon 157980 158203 1000 . . gene_id "MSTRG.130293"; transcript_id "MSTRG.130293.1"; exon_number "1"; scaffold_79900 StringTie exon 712 763 1000 + . gene_id "MSTRG.130313"; transcript_id "MSTRG.130313.1"; exon_number "1"; scaffold_79900 StringTie exon 936 1109 1000 + . gene_id "MSTRG.130313"; transcript_id "MSTRG.130313.1"; exon_number "2"; scaffold_79900 StringTie exon 1396 1538 1000 + . gene_id "MSTRG.130313"; transcript_id "MSTRG.130313.1"; exon_number "3"; scaffold_79928 StringTie exon 30072 30365 1000 . . gene_id "MSTRG.130331"; transcript_id "MSTRG.130331.1"; exon_number "1"; scaffold_79928 StringTie exon 143156 143472 1000 . . gene_id "MSTRG.130337"; transcript_id "MSTRG.130337.1"; exon_number "1"; scaffold_79928 StringTie exon 833187 833401 1000 . . gene_id "MSTRG.130368"; transcript_id "MSTRG.130368.1"; exon_number "1"; scaffold_79928 StringTie exon 853843 854207 1000 . . gene_id "MSTRG.130370"; transcript_id "MSTRG.130370.1"; exon_number "1"; scaffold_79928 StringTie exon 1184567 1184773 1000 . . gene_id "MSTRG.130394"; transcript_id "MSTRG.130394.1"; exon_number "1"; scaffold_79928 StringTie exon 1203406 1203490 1000 - . gene_id "MSTRG.130398"; transcript_id "MSTRG.130398.1"; exon_number "1"; scaffold_79928 StringTie exon 1203579 1203703 1000 - . gene_id "MSTRG.130398"; transcript_id "MSTRG.130398.1"; exon_number "2"; scaffold_79928 StringTie exon 1316246 1316492 1000 . . gene_id "MSTRG.130406"; transcript_id "MSTRG.130406.1"; exon_number "1"; scaffold_79928 StringTie exon 1535095 1535338 1000 . . gene_id "MSTRG.130412"; transcript_id "MSTRG.130412.1"; exon_number "1"; scaffold_79928 StringTie exon 2181882 2182128 1000 . . gene_id "MSTRG.130469"; transcript_id "MSTRG.130469.1"; exon_number "1"; scaffold_79929 StringTie exon 96618 97039 1000 . . gene_id "MSTRG.130476"; transcript_id "MSTRG.130476.1"; exon_number "1"; scaffold_79929 StringTie exon 196004 196207 1000 . . gene_id "MSTRG.130483"; transcript_id "MSTRG.130483.1"; exon_number "1"; scaffold_79930 StringTie exon 87965 88114 1000 + . gene_id "MSTRG.130533"; transcript_id "MSTRG.130533.1"; exon_number "1"; scaffold_79930 StringTie exon 89139 89284 1000 + . gene_id "MSTRG.130533"; transcript_id "MSTRG.130533.1"; exon_number "2"; scaffold_79930 StringTie exon 89393 89425 1000 + . gene_id "MSTRG.130533"; transcript_id "MSTRG.130533.1"; exon_number "3"; scaffold_79930 StringTie exon 96913 96967 1000 + . gene_id "MSTRG.130533"; transcript_id "MSTRG.130533.1"; exon_number "4"; scaffold_79930 StringTie exon 249873 250218 1000 . . gene_id "MSTRG.130544"; transcript_id "MSTRG.130544.1"; exon_number "1"; scaffold_79930 StringTie exon 268199 268407 1000 . . gene_id "MSTRG.130546"; transcript_id "MSTRG.130546.1"; exon_number "1"; scaffold_79930 StringTie exon 920132 920440 1000 . . gene_id "MSTRG.130589"; transcript_id "MSTRG.130589.1"; exon_number "1"; scaffold_79930 StringTie exon 936482 937683 1000 . . gene_id "MSTRG.130592"; transcript_id "MSTRG.130592.1"; exon_number "1"; scaffold_79930 StringTie exon 952547 952762 1000 + . gene_id "MSTRG.130596"; transcript_id "MSTRG.130596.1"; exon_number "1"; scaffold_79930 StringTie exon 972202 972315 1000 + . gene_id "MSTRG.130596"; transcript_id "MSTRG.130596.1"; exon_number "2"; scaffold_79930 StringTie exon 972416 972457 1000 + . gene_id "MSTRG.130596"; transcript_id "MSTRG.130596.1"; exon_number "3"; scaffold_79930 StringTie exon 972622 972857 1000 + . gene_id "MSTRG.130596"; transcript_id "MSTRG.130596.1"; exon_number "4"; scaffold_79930 StringTie exon 973006 973090 1000 + . gene_id "MSTRG.130596"; transcript_id "MSTRG.130596.1"; exon_number "5"; scaffold_79930 StringTie exon 973203 973288 1000 + . gene_id "MSTRG.130596"; transcript_id "MSTRG.130596.1"; exon_number "6"; scaffold_79930 StringTie exon 973448 973905 1000 + . gene_id "MSTRG.130596"; transcript_id "MSTRG.130596.1"; exon_number "7"; scaffold_79930 StringTie exon 977541 978152 1000 . . gene_id "MSTRG.130597"; transcript_id "MSTRG.130597.1"; exon_number "1"; scaffold_79930 StringTie exon 1047068 1047337 1000 - . gene_id "MSTRG.130620"; transcript_id "MSTRG.130620.1"; exon_number "1"; scaffold_79930 StringTie exon 1051431 1051661 1000 - . gene_id "MSTRG.130620"; transcript_id "MSTRG.130620.1"; exon_number "2"; scaffold_79930 StringTie exon 1070869 1071141 1000 . . gene_id "MSTRG.130623"; transcript_id "MSTRG.130623.1"; exon_number "1"; scaffold_79932 StringTie exon 243282 243512 1000 . . gene_id "MSTRG.130661"; transcript_id "MSTRG.130661.1"; exon_number "1"; scaffold_79932 StringTie exon 325567 325582 1000 + . gene_id "MSTRG.130666"; transcript_id "MSTRG.130666.2"; exon_number "1"; scaffold_79932 StringTie exon 326388 326520 1000 + . gene_id "MSTRG.130666"; transcript_id "MSTRG.130666.2"; exon_number "2"; scaffold_79932 StringTie exon 326661 326787 1000 + . gene_id "MSTRG.130666"; transcript_id "MSTRG.130666.2"; exon_number "3"; scaffold_79932 StringTie exon 326985 327155 1000 + . gene_id "MSTRG.130666"; transcript_id "MSTRG.130666.2"; exon_number "4"; scaffold_79932 StringTie exon 327369 327571 1000 + . gene_id "MSTRG.130666"; transcript_id "MSTRG.130666.2"; exon_number "5"; scaffold_79932 StringTie exon 327949 328186 1000 + . gene_id "MSTRG.130666"; transcript_id "MSTRG.130666.2"; exon_number "6"; scaffold_79934 StringTie exon 54197 54453 1000 . . gene_id "MSTRG.130697"; transcript_id "MSTRG.130697.1"; exon_number "1"; scaffold_79934 StringTie exon 114389 114970 1000 . . gene_id "MSTRG.130700"; transcript_id "MSTRG.130700.1"; exon_number "1"; scaffold_79934 StringTie exon 372262 372538 1000 . . gene_id "MSTRG.130731"; transcript_id "MSTRG.130731.1"; exon_number "1"; scaffold_79934 StringTie exon 542889 543159 1000 . . gene_id "MSTRG.130738"; transcript_id "MSTRG.130738.1"; exon_number "1"; scaffold_79934 StringTie exon 605282 605438 1000 - . gene_id "MSTRG.130746"; transcript_id "MSTRG.130746.1"; exon_number "1"; scaffold_79934 StringTie exon 605736 605834 1000 - . gene_id "MSTRG.130746"; transcript_id "MSTRG.130746.1"; exon_number "2"; scaffold_79934 StringTie exon 784934 785292 1000 . . gene_id "MSTRG.130760"; transcript_id "MSTRG.130760.1"; exon_number "1"; scaffold_79934 StringTie exon 1132421 1133021 1000 . . gene_id "MSTRG.130778"; transcript_id "MSTRG.130778.1"; exon_number "1"; scaffold_79934 StringTie exon 1139481 1139701 1000 . . gene_id "MSTRG.130779"; transcript_id "MSTRG.130779.1"; exon_number "1"; scaffold_79934 StringTie exon 1313478 1313755 1000 . . gene_id "MSTRG.130793"; transcript_id "MSTRG.130793.1"; exon_number "1"; scaffold_79934 StringTie exon 1345174 1345442 1000 . . gene_id "MSTRG.130794"; transcript_id "MSTRG.130794.1"; exon_number "1"; scaffold_79934 StringTie exon 1469822 1470109 1000 . . gene_id "MSTRG.130797"; transcript_id "MSTRG.130797.1"; exon_number "1"; scaffold_79934 StringTie exon 1690791 1691063 1000 . . gene_id "MSTRG.130808"; transcript_id "MSTRG.130808.1"; exon_number "1"; scaffold_79934 StringTie exon 1992635 1992855 1000 . . gene_id "MSTRG.130826"; transcript_id "MSTRG.130826.1"; exon_number "1"; scaffold_79935 StringTie exon 19278 19500 1000 . . gene_id "MSTRG.130836"; transcript_id "MSTRG.130836.1"; exon_number "1"; scaffold_79935 StringTie exon 121613 121693 1000 - . gene_id "MSTRG.130849"; transcript_id "MSTRG.130849.1"; exon_number "1"; scaffold_79935 StringTie exon 121957 122060 1000 - . gene_id "MSTRG.130849"; transcript_id "MSTRG.130849.1"; exon_number "2"; scaffold_79935 StringTie exon 122172 122305 1000 - . gene_id "MSTRG.130849"; transcript_id "MSTRG.130849.1"; exon_number "3"; scaffold_79935 StringTie exon 180547 180905 1000 . . gene_id "MSTRG.130855"; transcript_id "MSTRG.130855.1"; exon_number "1"; scaffold_79936 StringTie exon 177534 178700 1000 . . gene_id "MSTRG.130893"; transcript_id "MSTRG.130893.1"; exon_number "1"; scaffold_79936 StringTie exon 515062 515476 1000 . . gene_id "MSTRG.130906"; transcript_id "MSTRG.130906.1"; exon_number "1"; scaffold_79936 StringTie exon 602701 603166 1000 . . gene_id "MSTRG.130910"; transcript_id "MSTRG.130910.1"; exon_number "1"; scaffold_79937 StringTie exon 33521 33739 1000 . . gene_id "MSTRG.130932"; transcript_id "MSTRG.130932.1"; exon_number "1"; scaffold_79937 StringTie exon 39306 39748 1000 . . gene_id "MSTRG.130934"; transcript_id "MSTRG.130934.1"; exon_number "1"; scaffold_79939 StringTie exon 353810 354052 1000 . . gene_id "MSTRG.130991"; transcript_id "MSTRG.130991.1"; exon_number "1"; scaffold_79941 StringTie exon 6735 6965 1000 . . gene_id "MSTRG.130998"; transcript_id "MSTRG.130998.1"; exon_number "1"; scaffold_79941 StringTie exon 233404 233654 1000 . . gene_id "MSTRG.131008"; transcript_id "MSTRG.131008.1"; exon_number "1"; scaffold_79941 StringTie exon 532041 532274 1000 . . gene_id "MSTRG.131021"; transcript_id "MSTRG.131021.1"; exon_number "1"; scaffold_7995 StringTie exon 163 446 1000 . . gene_id "MSTRG.131024"; transcript_id "MSTRG.131024.1"; exon_number "1"; scaffold_7998 StringTie exon 20477 21058 1000 . . gene_id "MSTRG.131034"; transcript_id "MSTRG.131034.1"; exon_number "1"; scaffold_8 StringTie exon 555350 555618 1000 . . gene_id "MSTRG.131072"; transcript_id "MSTRG.131072.1"; exon_number "1"; scaffold_8 StringTie exon 663973 664210 1000 . . gene_id "MSTRG.131079"; transcript_id "MSTRG.131079.1"; exon_number "1"; scaffold_8 StringTie exon 740147 740625 1000 . . gene_id "MSTRG.131085"; transcript_id "MSTRG.131085.1"; exon_number "1"; scaffold_8 StringTie exon 742104 742342 1000 . . gene_id "MSTRG.131086"; transcript_id "MSTRG.131086.1"; exon_number "1"; scaffold_8 StringTie exon 844058 844294 1000 . . gene_id "MSTRG.131093"; transcript_id "MSTRG.131093.1"; exon_number "1"; scaffold_8 StringTie exon 1033182 1033458 1000 . . gene_id "MSTRG.131101"; transcript_id "MSTRG.131101.1"; exon_number "1"; scaffold_8 StringTie exon 1197875 1198137 1000 . . gene_id "MSTRG.131112"; transcript_id "MSTRG.131112.1"; exon_number "1"; scaffold_8 StringTie exon 1353230 1353437 1000 . . gene_id "MSTRG.131121"; transcript_id "MSTRG.131121.1"; exon_number "1"; scaffold_8 StringTie exon 1521596 1521916 1000 . . gene_id "MSTRG.131128"; transcript_id "MSTRG.131128.1"; exon_number "1"; scaffold_8 StringTie exon 1522378 1522600 1000 . . gene_id "MSTRG.131129"; transcript_id "MSTRG.131129.1"; exon_number "1"; scaffold_8 StringTie exon 1640308 1640531 1000 . . gene_id "MSTRG.131139"; transcript_id "MSTRG.131139.1"; exon_number "1"; scaffold_8 StringTie exon 1963313 1963623 1000 . . gene_id "MSTRG.131157"; transcript_id "MSTRG.131157.1"; exon_number "1"; scaffold_8 StringTie exon 2022863 2022878 1000 + . gene_id "MSTRG.131165"; transcript_id "MSTRG.131165.1"; exon_number "1"; scaffold_8 StringTie exon 2022984 2023902 1000 + . gene_id "MSTRG.131165"; transcript_id "MSTRG.131165.1"; exon_number "2"; scaffold_8 StringTie exon 2154001 2154301 1000 . . gene_id "MSTRG.131179"; transcript_id "MSTRG.131179.1"; exon_number "1"; scaffold_8 StringTie exon 2517943 2518005 1000 + . gene_id "MSTRG.131211"; transcript_id "MSTRG.131211.1"; exon_number "1"; scaffold_8 StringTie exon 2519143 2519285 1000 + . gene_id "MSTRG.131211"; transcript_id "MSTRG.131211.1"; exon_number "2"; scaffold_8 StringTie exon 2673302 2676277 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "1"; scaffold_8 StringTie exon 2676453 2676656 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "2"; scaffold_8 StringTie exon 2676818 2676919 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "3"; scaffold_8 StringTie exon 2677037 2677141 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "4"; scaffold_8 StringTie exon 2677251 2677438 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "5"; scaffold_8 StringTie exon 2677672 2677834 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "6"; scaffold_8 StringTie exon 2679770 2680010 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "7"; scaffold_8 StringTie exon 2680154 2680314 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "8"; scaffold_8 StringTie exon 2684047 2684142 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "9"; scaffold_8 StringTie exon 2693335 2693689 1000 - . gene_id "MSTRG.131222"; transcript_id "MSTRG.131222.1"; exon_number "10"; scaffold_8 StringTie exon 3019349 3020379 1000 . . gene_id "MSTRG.131256"; transcript_id "MSTRG.131256.1"; exon_number "1"; scaffold_80 StringTie exon 31804 31834 1000 + . gene_id "MSTRG.131276"; transcript_id "MSTRG.131276.1"; exon_number "1"; scaffold_80 StringTie exon 31908 32101 1000 + . gene_id "MSTRG.131276"; transcript_id "MSTRG.131276.1"; exon_number "2"; scaffold_80 StringTie exon 32222 32327 1000 + . gene_id "MSTRG.131276"; transcript_id "MSTRG.131276.1"; exon_number "3"; scaffold_80 StringTie exon 34017 34030 1000 + . gene_id "MSTRG.131276"; transcript_id "MSTRG.131276.1"; exon_number "4"; scaffold_80 StringTie exon 288903 289558 1000 . . gene_id "MSTRG.131298"; transcript_id "MSTRG.131298.1"; exon_number "1"; scaffold_80 StringTie exon 364062 365501 1000 . . gene_id "MSTRG.131305"; transcript_id "MSTRG.131305.1"; exon_number "1"; scaffold_80 StringTie exon 816190 816239 1000 - . gene_id "MSTRG.131348"; transcript_id "MSTRG.131348.1"; exon_number "1"; scaffold_80 StringTie exon 816452 816541 1000 - . gene_id "MSTRG.131348"; transcript_id "MSTRG.131348.1"; exon_number "2"; scaffold_80 StringTie exon 817113 817299 1000 - . gene_id "MSTRG.131348"; transcript_id "MSTRG.131348.1"; exon_number "3"; scaffold_80 StringTie exon 961776 962054 1000 . . gene_id "MSTRG.131359"; transcript_id "MSTRG.131359.1"; exon_number "1"; scaffold_80 StringTie exon 1010568 1010767 1000 . . gene_id "MSTRG.131367"; transcript_id "MSTRG.131367.1"; exon_number "1"; scaffold_80 StringTie exon 1102691 1103018 1000 . . gene_id "MSTRG.131376"; transcript_id "MSTRG.131376.1"; exon_number "1"; scaffold_80 StringTie exon 1143374 1143583 1000 . . gene_id "MSTRG.131377"; transcript_id "MSTRG.131377.1"; exon_number "1"; scaffold_80 StringTie exon 1198502 1199104 1000 . . gene_id "MSTRG.131386"; transcript_id "MSTRG.131386.1"; exon_number "1"; scaffold_80 StringTie exon 1203297 1203499 1000 . . gene_id "MSTRG.131388"; transcript_id "MSTRG.131388.1"; exon_number "1"; scaffold_80 StringTie exon 1252138 1252408 1000 . . gene_id "MSTRG.131395"; transcript_id "MSTRG.131395.1"; exon_number "1"; scaffold_80 StringTie exon 1263782 1263814 1000 - . gene_id "MSTRG.131399"; transcript_id "MSTRG.131399.1"; exon_number "1"; scaffold_80 StringTie exon 1265821 1265920 1000 - . gene_id "MSTRG.131399"; transcript_id "MSTRG.131399.1"; exon_number "2"; scaffold_80 StringTie exon 1266061 1266220 1000 - . gene_id "MSTRG.131399"; transcript_id "MSTRG.131399.1"; exon_number "3"; scaffold_80 StringTie exon 1266408 1266511 1000 - . gene_id "MSTRG.131399"; transcript_id "MSTRG.131399.1"; exon_number "4"; scaffold_80 StringTie exon 1396570 1396728 1000 - . gene_id "MSTRG.131416"; transcript_id "MSTRG.131416.1"; exon_number "1"; scaffold_80 StringTie exon 1396845 1397049 1000 - . gene_id "MSTRG.131416"; transcript_id "MSTRG.131416.1"; exon_number "2"; scaffold_80 StringTie exon 1397335 1397407 1000 - . gene_id "MSTRG.131416"; transcript_id "MSTRG.131416.1"; exon_number "3"; scaffold_80 StringTie exon 1538458 1538503 1000 + . gene_id "MSTRG.131427"; transcript_id "MSTRG.131427.1"; exon_number "1"; scaffold_80 StringTie exon 1538902 1539426 1000 + . gene_id "MSTRG.131427"; transcript_id "MSTRG.131427.1"; exon_number "2"; scaffold_80 StringTie exon 1557005 1557067 1000 + . gene_id "MSTRG.131437"; transcript_id "MSTRG.131437.1"; exon_number "1"; scaffold_80 StringTie exon 1558568 1559217 1000 + . gene_id "MSTRG.131437"; transcript_id "MSTRG.131437.1"; exon_number "2"; scaffold_80 StringTie exon 1584136 1584453 1000 . . gene_id "MSTRG.131442"; transcript_id "MSTRG.131442.1"; exon_number "1"; scaffold_80 StringTie exon 1698450 1698756 1000 . . gene_id "MSTRG.131448"; transcript_id "MSTRG.131448.1"; exon_number "1"; scaffold_800 StringTie exon 130616 130826 1000 . . gene_id "MSTRG.131464"; transcript_id "MSTRG.131464.1"; exon_number "1"; scaffold_8005 StringTie exon 2445 2652 1000 + . gene_id "MSTRG.131498"; transcript_id "MSTRG.131498.1"; exon_number "1"; scaffold_8005 StringTie exon 3629 3684 1000 + . gene_id "MSTRG.131498"; transcript_id "MSTRG.131498.1"; exon_number "2"; scaffold_801 StringTie exon 189769 189852 1000 - . gene_id "MSTRG.131529"; transcript_id "MSTRG.131529.1"; exon_number "1"; scaffold_801 StringTie exon 190801 190884 1000 - . gene_id "MSTRG.131529"; transcript_id "MSTRG.131529.1"; exon_number "2"; scaffold_801 StringTie exon 191587 191920 1000 - . gene_id "MSTRG.131529"; transcript_id "MSTRG.131529.1"; exon_number "3"; scaffold_801 StringTie exon 192678 193165 1000 . . gene_id "MSTRG.131530"; transcript_id "MSTRG.131530.1"; exon_number "1"; scaffold_801 StringTie exon 349843 350050 1000 - . gene_id "MSTRG.131535"; transcript_id "MSTRG.131535.1"; exon_number "1"; scaffold_801 StringTie exon 350704 350896 1000 - . gene_id "MSTRG.131535"; transcript_id "MSTRG.131535.1"; exon_number "2"; scaffold_801 StringTie exon 350976 351066 1000 - . gene_id "MSTRG.131535"; transcript_id "MSTRG.131535.1"; exon_number "3"; scaffold_801 StringTie exon 351242 351346 1000 - . gene_id "MSTRG.131535"; transcript_id "MSTRG.131535.1"; exon_number "4"; scaffold_802 StringTie exon 41739 42293 1000 . . gene_id "MSTRG.131575"; transcript_id "MSTRG.131575.1"; exon_number "1"; scaffold_802 StringTie exon 324819 325052 1000 + . gene_id "MSTRG.131610"; transcript_id "MSTRG.131610.1"; exon_number "1"; scaffold_802 StringTie exon 329180 330493 1000 . . gene_id "MSTRG.131612"; transcript_id "MSTRG.131612.1"; exon_number "1"; scaffold_802 StringTie exon 456279 456327 1000 + . gene_id "MSTRG.131617"; transcript_id "MSTRG.131617.1"; exon_number "1"; scaffold_802 StringTie exon 457193 457204 1000 + . gene_id "MSTRG.131617"; transcript_id "MSTRG.131617.1"; exon_number "2"; scaffold_802 StringTie exon 457547 457666 1000 + . gene_id "MSTRG.131617"; transcript_id "MSTRG.131617.1"; exon_number "3"; scaffold_802 StringTie exon 459398 459595 1000 + . gene_id "MSTRG.131617"; transcript_id "MSTRG.131617.1"; exon_number "4"; scaffold_802 StringTie exon 463535 463611 1000 + . gene_id "MSTRG.131617"; transcript_id "MSTRG.131617.1"; exon_number "5"; scaffold_802 StringTie exon 468145 468203 1000 + . gene_id "MSTRG.131619"; transcript_id "MSTRG.131619.1"; exon_number "1"; scaffold_802 StringTie exon 468545 468625 1000 + . gene_id "MSTRG.131619"; transcript_id "MSTRG.131619.1"; exon_number "2"; scaffold_802 StringTie exon 468937 469064 1000 + . gene_id "MSTRG.131619"; transcript_id "MSTRG.131619.1"; exon_number "3"; scaffold_802 StringTie exon 469507 469642 1000 + . gene_id "MSTRG.131619"; transcript_id "MSTRG.131619.1"; exon_number "4"; scaffold_8020 StringTie exon 221 598 1000 . . gene_id "MSTRG.131626"; transcript_id "MSTRG.131626.1"; exon_number "1"; scaffold_803 StringTie exon 84923 85129 1000 . . gene_id "MSTRG.131648"; transcript_id "MSTRG.131648.1"; exon_number "1"; scaffold_8031 StringTie exon 5 813 1000 - . gene_id "MSTRG.131683"; transcript_id "MSTRG.131683.1"; exon_number "1"; scaffold_8036 StringTie exon 457 1407 1000 . . gene_id "MSTRG.131692"; transcript_id "MSTRG.131692.1"; exon_number "1"; scaffold_8038 StringTie exon 14921 15239 1000 . . gene_id "MSTRG.131701"; transcript_id "MSTRG.131701.1"; exon_number "1"; scaffold_804 StringTie exon 33849 34156 1000 . . gene_id "MSTRG.131713"; transcript_id "MSTRG.131713.1"; exon_number "1"; scaffold_804 StringTie exon 34986 35394 1000 . . gene_id "MSTRG.131714"; transcript_id "MSTRG.131714.1"; exon_number "1"; scaffold_8045 StringTie exon 3097 3220 1000 + . gene_id "MSTRG.131741"; transcript_id "MSTRG.131741.1"; exon_number "1"; scaffold_8045 StringTie exon 3373 3528 1000 + . gene_id "MSTRG.131741"; transcript_id "MSTRG.131741.1"; exon_number "2"; scaffold_8045 StringTie exon 4701 4726 1000 + . gene_id "MSTRG.131741"; transcript_id "MSTRG.131741.1"; exon_number "3"; scaffold_8045 StringTie exon 5380 5612 1000 + . gene_id "MSTRG.131741"; transcript_id "MSTRG.131741.1"; exon_number "4"; scaffold_8046 StringTie exon 26820 27263 1000 . . gene_id "MSTRG.131746"; transcript_id "MSTRG.131746.1"; exon_number "1"; scaffold_805 StringTie exon 14879 14939 1000 + . gene_id "MSTRG.131755"; transcript_id "MSTRG.131755.1"; exon_number "1"; scaffold_805 StringTie exon 15747 15895 1000 + . gene_id "MSTRG.131755"; transcript_id "MSTRG.131755.1"; exon_number "2"; scaffold_805 StringTie exon 61284 61508 1000 . . gene_id "MSTRG.131758"; transcript_id "MSTRG.131758.1"; exon_number "1"; scaffold_805 StringTie exon 179495 179697 1000 . . gene_id "MSTRG.131770"; transcript_id "MSTRG.131770.1"; exon_number "1"; scaffold_8055 StringTie exon 19321 19608 1000 + . gene_id "MSTRG.131793"; transcript_id "MSTRG.131793.1"; exon_number "1"; scaffold_8055 StringTie exon 23160 23221 1000 + . gene_id "MSTRG.131793"; transcript_id "MSTRG.131793.1"; exon_number "2"; scaffold_8055 StringTie exon 23663 23690 1000 + . gene_id "MSTRG.131793"; transcript_id "MSTRG.131793.1"; exon_number "3"; scaffold_806 StringTie exon 342608 342807 1000 . . gene_id "MSTRG.131819"; transcript_id "MSTRG.131819.1"; exon_number "1"; scaffold_806 StringTie exon 367110 367647 1000 . . gene_id "MSTRG.131823"; transcript_id "MSTRG.131823.1"; exon_number "1"; scaffold_806 StringTie exon 456958 457060 1000 + . gene_id "MSTRG.131831"; transcript_id "MSTRG.131831.1"; exon_number "1"; scaffold_806 StringTie exon 457191 457283 1000 + . gene_id "MSTRG.131831"; transcript_id "MSTRG.131831.1"; exon_number "2"; scaffold_806 StringTie exon 468850 468980 1000 + . gene_id "MSTRG.131831"; transcript_id "MSTRG.131831.1"; exon_number "3"; scaffold_806 StringTie exon 470336 470395 1000 + . gene_id "MSTRG.131831"; transcript_id "MSTRG.131831.1"; exon_number "4"; scaffold_806 StringTie exon 470941 471049 1000 + . gene_id "MSTRG.131831"; transcript_id "MSTRG.131831.1"; exon_number "5"; scaffold_806 StringTie exon 471962 472017 1000 + . gene_id "MSTRG.131831"; transcript_id "MSTRG.131831.1"; exon_number "6"; scaffold_807 StringTie exon 68754 69021 1000 . . gene_id "MSTRG.131864"; transcript_id "MSTRG.131864.1"; exon_number "1"; scaffold_807 StringTie exon 162482 162812 1000 + . gene_id "MSTRG.131874"; transcript_id "MSTRG.131874.1"; exon_number "1"; scaffold_807 StringTie exon 166179 166206 1000 + . gene_id "MSTRG.131874"; transcript_id "MSTRG.131874.1"; exon_number "2"; scaffold_807 StringTie exon 226335 226544 1000 . . gene_id "MSTRG.131880"; transcript_id "MSTRG.131880.1"; exon_number "1"; scaffold_8080 StringTie exon 25950 27333 1000 . . gene_id "MSTRG.131947"; transcript_id "MSTRG.131947.1"; exon_number "1"; scaffold_8084 StringTie exon 28349 28675 1000 . . gene_id "MSTRG.131954"; transcript_id "MSTRG.131954.1"; exon_number "1"; scaffold_8088 StringTie exon 19357 19735 1000 - . gene_id "MSTRG.131958"; transcript_id "MSTRG.131958.1"; exon_number "1"; scaffold_8088 StringTie exon 19958 20140 1000 - . gene_id "MSTRG.131958"; transcript_id "MSTRG.131958.1"; exon_number "2"; scaffold_8088 StringTie exon 20274 20626 1000 - . gene_id "MSTRG.131958"; transcript_id "MSTRG.131958.1"; exon_number "3"; scaffold_8088 StringTie exon 21377 21471 1000 - . gene_id "MSTRG.131958"; transcript_id "MSTRG.131958.1"; exon_number "4"; scaffold_809 StringTie exon 362061 362098 1000 + . gene_id "MSTRG.131974"; transcript_id "MSTRG.131974.2"; exon_number "1"; scaffold_809 StringTie exon 362166 362309 1000 + . gene_id "MSTRG.131974"; transcript_id "MSTRG.131974.2"; exon_number "2"; scaffold_809 StringTie exon 362502 362721 1000 + . gene_id "MSTRG.131974"; transcript_id "MSTRG.131974.2"; exon_number "3"; scaffold_809 StringTie exon 362818 362914 1000 + . gene_id "MSTRG.131974"; transcript_id "MSTRG.131974.2"; exon_number "4"; scaffold_809 StringTie exon 362935 363241 1000 . . gene_id "MSTRG.131975"; transcript_id "MSTRG.131975.1"; exon_number "1"; scaffold_8093 StringTie exon 4813 5088 1000 . . gene_id "MSTRG.131999"; transcript_id "MSTRG.131999.1"; exon_number "1"; scaffold_8097 StringTie exon 12289 12954 1000 . . gene_id "MSTRG.132010"; transcript_id "MSTRG.132010.1"; exon_number "1"; scaffold_81 StringTie exon 149798 150033 1000 . . gene_id "MSTRG.132029"; transcript_id "MSTRG.132029.1"; exon_number "1"; scaffold_81 StringTie exon 394010 395343 1000 . . gene_id "MSTRG.132039"; transcript_id "MSTRG.132039.1"; exon_number "1"; scaffold_81 StringTie exon 434923 435159 1000 . . gene_id "MSTRG.132042"; transcript_id "MSTRG.132042.1"; exon_number "1"; scaffold_81 StringTie exon 686858 687150 1000 . . gene_id "MSTRG.132051"; transcript_id "MSTRG.132051.1"; exon_number "1"; scaffold_81 StringTie exon 966570 966817 1000 . . gene_id "MSTRG.132074"; transcript_id "MSTRG.132074.1"; exon_number "1"; scaffold_81 StringTie exon 1505933 1506352 1000 . . gene_id "MSTRG.132097"; transcript_id "MSTRG.132097.1"; exon_number "1"; scaffold_81 StringTie exon 1620763 1620974 1000 . . gene_id "MSTRG.132105"; transcript_id "MSTRG.132105.1"; exon_number "1"; scaffold_81 StringTie exon 1645702 1645972 1000 . . gene_id "MSTRG.132108"; transcript_id "MSTRG.132108.1"; exon_number "1"; scaffold_81 StringTie exon 1687353 1687610 1000 . . gene_id "MSTRG.132113"; transcript_id "MSTRG.132113.1"; exon_number "1"; scaffold_810 StringTie exon 387662 387926 1000 . . gene_id "MSTRG.132139"; transcript_id "MSTRG.132139.1"; exon_number "1"; scaffold_811 StringTie exon 83297 83558 1000 - . gene_id "MSTRG.132168"; transcript_id "MSTRG.132168.1"; exon_number "1"; scaffold_811 StringTie exon 168546 169595 1000 - . gene_id "MSTRG.132176"; transcript_id "MSTRG.132176.1"; exon_number "1"; scaffold_811 StringTie exon 169619 172134 1000 - . gene_id "MSTRG.132176"; transcript_id "MSTRG.132176.1"; exon_number "2"; scaffold_811 StringTie exon 437685 438049 1000 . . gene_id "MSTRG.132187"; transcript_id "MSTRG.132187.1"; exon_number "1"; scaffold_812 StringTie exon 83422 83834 1000 . . gene_id "MSTRG.132199"; transcript_id "MSTRG.132199.1"; exon_number "1"; scaffold_812 StringTie exon 130165 130330 1000 - . gene_id "MSTRG.132206"; transcript_id "MSTRG.132206.1"; exon_number "1"; scaffold_812 StringTie exon 130590 130657 1000 - . gene_id "MSTRG.132206"; transcript_id "MSTRG.132206.1"; exon_number "2"; scaffold_812 StringTie exon 130771 130803 1000 - . gene_id "MSTRG.132206"; transcript_id "MSTRG.132206.1"; exon_number "3"; scaffold_812 StringTie exon 131000 131015 1000 - . gene_id "MSTRG.132206"; transcript_id "MSTRG.132206.1"; exon_number "4"; scaffold_812 StringTie exon 132964 133006 1000 - . gene_id "MSTRG.132206"; transcript_id "MSTRG.132206.1"; exon_number "5"; scaffold_812 StringTie exon 133442 133495 1000 - . gene_id "MSTRG.132206"; transcript_id "MSTRG.132206.1"; exon_number "6"; scaffold_812 StringTie exon 133693 133764 1000 - . gene_id "MSTRG.132206"; transcript_id "MSTRG.132206.1"; exon_number "7"; scaffold_812 StringTie exon 133963 134000 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.3"; exon_number "1"; scaffold_812 StringTie exon 135100 135228 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.3"; exon_number "2"; scaffold_812 StringTie exon 135508 135615 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.3"; exon_number "3"; scaffold_812 StringTie exon 135740 135812 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.3"; exon_number "4"; scaffold_812 StringTie exon 137066 137109 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.3"; exon_number "5"; scaffold_812 StringTie exon 138489 138545 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.3"; exon_number "6"; scaffold_812 StringTie exon 138794 138891 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.3"; exon_number "7"; scaffold_812 StringTie exon 139614 139724 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.3"; exon_number "8"; scaffold_812 StringTie exon 138995 139041 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.4"; exon_number "1"; scaffold_812 StringTie exon 139614 139723 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.4"; exon_number "2"; scaffold_812 StringTie exon 141039 141125 1000 - . gene_id "MSTRG.132207"; transcript_id "MSTRG.132207.4"; exon_number "3"; scaffold_812 StringTie exon 340888 341027 1000 - . gene_id "MSTRG.132225"; transcript_id "MSTRG.132225.1"; exon_number "1"; scaffold_812 StringTie exon 341282 341383 1000 - . gene_id "MSTRG.132225"; transcript_id "MSTRG.132225.1"; exon_number "2"; scaffold_8126 StringTie exon 790 1008 1000 . . gene_id "MSTRG.132241"; transcript_id "MSTRG.132241.1"; exon_number "1"; scaffold_8129 StringTie exon 7403 7482 1000 - . gene_id "MSTRG.132248"; transcript_id "MSTRG.132248.1"; exon_number "1"; scaffold_8129 StringTie exon 7663 7863 1000 - . gene_id "MSTRG.132248"; transcript_id "MSTRG.132248.1"; exon_number "2"; scaffold_8129 StringTie exon 8053 8072 1000 - . gene_id "MSTRG.132248"; transcript_id "MSTRG.132248.1"; exon_number "3"; scaffold_8129 StringTie exon 8727 8775 1000 - . gene_id "MSTRG.132248"; transcript_id "MSTRG.132248.1"; exon_number "4"; scaffold_813 StringTie exon 16648 17288 1000 . . gene_id "MSTRG.132251"; transcript_id "MSTRG.132251.1"; exon_number "1"; scaffold_8133 StringTie exon 27829 28078 1000 . . gene_id "MSTRG.132296"; transcript_id "MSTRG.132296.1"; exon_number "1"; scaffold_814 StringTie exon 158473 158684 1000 . . gene_id "MSTRG.132310"; transcript_id "MSTRG.132310.1"; exon_number "1"; scaffold_8140 StringTie exon 15658 16106 1000 . . gene_id "MSTRG.132342"; transcript_id "MSTRG.132342.1"; exon_number "1"; scaffold_815 StringTie exon 306804 307021 1000 . . gene_id "MSTRG.132389"; transcript_id "MSTRG.132389.1"; exon_number "1"; scaffold_8158 StringTie exon 13536 14096 1000 . . gene_id "MSTRG.132426"; transcript_id "MSTRG.132426.1"; exon_number "1"; scaffold_8159 StringTie exon 6631 6842 1000 . . gene_id "MSTRG.132428"; transcript_id "MSTRG.132428.1"; exon_number "1"; scaffold_816 StringTie exon 223771 224036 1000 + . gene_id "MSTRG.132439"; transcript_id "MSTRG.132439.1"; exon_number "1"; scaffold_816 StringTie exon 224323 224409 1000 + . gene_id "MSTRG.132439"; transcript_id "MSTRG.132439.1"; exon_number "2"; scaffold_816 StringTie exon 224628 224680 1000 + . gene_id "MSTRG.132439"; transcript_id "MSTRG.132439.1"; exon_number "3"; scaffold_816 StringTie exon 271463 271675 1000 . . gene_id "MSTRG.132442"; transcript_id "MSTRG.132442.1"; exon_number "1"; scaffold_816 StringTie exon 348391 349768 1000 . . gene_id "MSTRG.132452"; transcript_id "MSTRG.132452.1"; exon_number "1"; scaffold_816 StringTie exon 432635 432851 1000 . . gene_id "MSTRG.132456"; transcript_id "MSTRG.132456.1"; exon_number "1"; scaffold_8164 StringTie exon 12401 12715 1000 . . gene_id "MSTRG.132471"; transcript_id "MSTRG.132471.1"; exon_number "1"; scaffold_817 StringTie exon 371336 371697 1000 . . gene_id "MSTRG.132510"; transcript_id "MSTRG.132510.1"; exon_number "1"; scaffold_817 StringTie exon 372765 373019 1000 . . gene_id "MSTRG.132511"; transcript_id "MSTRG.132511.1"; exon_number "1"; scaffold_8175 StringTie exon 26592 26864 1000 . . gene_id "MSTRG.132527"; transcript_id "MSTRG.132527.1"; exon_number "1"; scaffold_818 StringTie exon 30916 31199 1000 . . gene_id "MSTRG.132537"; transcript_id "MSTRG.132537.1"; exon_number "1"; scaffold_818 StringTie exon 462889 463132 1000 . . gene_id "MSTRG.132559"; transcript_id "MSTRG.132559.1"; exon_number "1"; scaffold_8186 StringTie exon 6784 7197 1000 . . gene_id "MSTRG.132571"; transcript_id "MSTRG.132571.1"; exon_number "1"; scaffold_8187 StringTie exon 7190 7431 1000 . . gene_id "MSTRG.132578"; transcript_id "MSTRG.132578.1"; exon_number "1"; scaffold_819 StringTie exon 281598 281840 1000 . . gene_id "MSTRG.132596"; transcript_id "MSTRG.132596.1"; exon_number "1"; scaffold_819 StringTie exon 306894 307060 1000 + . gene_id "MSTRG.132601"; transcript_id "MSTRG.132601.1"; exon_number "1"; scaffold_819 StringTie exon 316172 316247 1000 + . gene_id "MSTRG.132601"; transcript_id "MSTRG.132601.1"; exon_number "2"; scaffold_819 StringTie exon 316970 317089 1000 + . gene_id "MSTRG.132601"; transcript_id "MSTRG.132601.1"; exon_number "3"; scaffold_819 StringTie exon 318174 318239 1000 + . gene_id "MSTRG.132601"; transcript_id "MSTRG.132601.1"; exon_number "4"; scaffold_819 StringTie exon 318355 318458 1000 + . gene_id "MSTRG.132601"; transcript_id "MSTRG.132601.1"; exon_number "5"; scaffold_819 StringTie exon 318766 318897 1000 + . gene_id "MSTRG.132601"; transcript_id "MSTRG.132601.1"; exon_number "6"; scaffold_819 StringTie exon 319191 320785 1000 + . gene_id "MSTRG.132601"; transcript_id "MSTRG.132601.1"; exon_number "7"; scaffold_8190 StringTie exon 12296 12782 1000 . . gene_id "MSTRG.132617"; transcript_id "MSTRG.132617.1"; exon_number "1"; scaffold_8196 StringTie exon 1319 1540 1000 . . gene_id "MSTRG.132630"; transcript_id "MSTRG.132630.1"; exon_number "1"; scaffold_82 StringTie exon 60187 60715 1000 . . gene_id "MSTRG.132645"; transcript_id "MSTRG.132645.1"; exon_number "1"; scaffold_82 StringTie exon 178902 179224 1000 . . gene_id "MSTRG.132651"; transcript_id "MSTRG.132651.1"; exon_number "1"; scaffold_82 StringTie exon 267528 267818 1000 . . gene_id "MSTRG.132658"; transcript_id "MSTRG.132658.1"; exon_number "1"; scaffold_82 StringTie exon 384957 385204 1000 . . gene_id "MSTRG.132668"; transcript_id "MSTRG.132668.1"; exon_number "1"; scaffold_82 StringTie exon 421387 421511 1000 - . gene_id "MSTRG.132673"; transcript_id "MSTRG.132673.1"; exon_number "1"; scaffold_82 StringTie exon 421860 421941 1000 - . gene_id "MSTRG.132673"; transcript_id "MSTRG.132673.1"; exon_number "2"; scaffold_82 StringTie exon 422227 422296 1000 - . gene_id "MSTRG.132673"; transcript_id "MSTRG.132673.1"; exon_number "3"; scaffold_82 StringTie exon 568506 568781 1000 + . gene_id "MSTRG.132693"; transcript_id "MSTRG.132693.1"; exon_number "1"; scaffold_82 StringTie exon 569645 569905 1000 + . gene_id "MSTRG.132693"; transcript_id "MSTRG.132693.1"; exon_number "2"; scaffold_82 StringTie exon 802469 802700 1000 + . gene_id "MSTRG.132706"; transcript_id "MSTRG.132706.1"; exon_number "1"; scaffold_82 StringTie exon 803804 804002 1000 + . gene_id "MSTRG.132706"; transcript_id "MSTRG.132706.1"; exon_number "2"; scaffold_82 StringTie exon 804913 804933 1000 + . gene_id "MSTRG.132706"; transcript_id "MSTRG.132706.1"; exon_number "3"; scaffold_82 StringTie exon 1098922 1099292 1000 . . gene_id "MSTRG.132732"; transcript_id "MSTRG.132732.1"; exon_number "1"; scaffold_82 StringTie exon 1130425 1130925 1000 . . gene_id "MSTRG.132734"; transcript_id "MSTRG.132734.1"; exon_number "1"; scaffold_820 StringTie exon 55479 55982 1000 . . gene_id "MSTRG.132779"; transcript_id "MSTRG.132779.1"; exon_number "1"; scaffold_820 StringTie exon 94236 94486 1000 . . gene_id "MSTRG.132783"; transcript_id "MSTRG.132783.1"; exon_number "1"; scaffold_820 StringTie exon 165501 165512 1000 + . gene_id "MSTRG.132790"; transcript_id "MSTRG.132790.1"; exon_number "1"; scaffold_820 StringTie exon 165720 165794 1000 + . gene_id "MSTRG.132790"; transcript_id "MSTRG.132790.1"; exon_number "2"; scaffold_820 StringTie exon 166512 166596 1000 + . gene_id "MSTRG.132790"; transcript_id "MSTRG.132790.1"; exon_number "3"; scaffold_820 StringTie exon 168737 168878 1000 + . gene_id "MSTRG.132790"; transcript_id "MSTRG.132790.1"; exon_number "4"; scaffold_820 StringTie exon 169779 170064 1000 + . gene_id "MSTRG.132790"; transcript_id "MSTRG.132790.1"; exon_number "5"; scaffold_820 StringTie exon 421251 421416 1000 - . gene_id "MSTRG.132815"; transcript_id "MSTRG.132815.1"; exon_number "1"; scaffold_820 StringTie exon 422767 422846 1000 - . gene_id "MSTRG.132815"; transcript_id "MSTRG.132815.1"; exon_number "2"; scaffold_820 StringTie exon 423702 423783 1000 - . gene_id "MSTRG.132816"; transcript_id "MSTRG.132816.1"; exon_number "1"; scaffold_820 StringTie exon 423924 424089 1000 - . gene_id "MSTRG.132816"; transcript_id "MSTRG.132816.1"; exon_number "2"; scaffold_8206 StringTie exon 6963 7143 1000 + . gene_id "MSTRG.132833"; transcript_id "MSTRG.132833.1"; exon_number "1"; scaffold_8206 StringTie exon 10204 10296 1000 + . gene_id "MSTRG.132833"; transcript_id "MSTRG.132833.1"; exon_number "2"; scaffold_8208 StringTie exon 11477 11519 1000 - . gene_id "MSTRG.132836"; transcript_id "MSTRG.132836.1"; exon_number "1"; scaffold_8208 StringTie exon 11806 11885 1000 - . gene_id "MSTRG.132836"; transcript_id "MSTRG.132836.1"; exon_number "2"; scaffold_8208 StringTie exon 14282 14400 1000 - . gene_id "MSTRG.132836"; transcript_id "MSTRG.132836.1"; exon_number "3"; scaffold_8212 StringTie exon 23399 23599 1000 - . gene_id "MSTRG.132875"; transcript_id "MSTRG.132875.1"; exon_number "1"; scaffold_8212 StringTie exon 25383 25477 1000 - . gene_id "MSTRG.132875"; transcript_id "MSTRG.132875.1"; exon_number "2"; scaffold_8224 StringTie exon 662 934 1000 . . gene_id "MSTRG.132928"; transcript_id "MSTRG.132928.1"; exon_number "1"; scaffold_8225 StringTie exon 16367 16582 1000 . . gene_id "MSTRG.132930"; transcript_id "MSTRG.132930.1"; exon_number "1"; scaffold_8229 StringTie exon 26505 26715 1000 . . gene_id "MSTRG.132946"; transcript_id "MSTRG.132946.1"; exon_number "1"; scaffold_823 StringTie exon 34142 34435 1000 . . gene_id "MSTRG.132950"; transcript_id "MSTRG.132950.1"; exon_number "1"; scaffold_823 StringTie exon 114543 115191 1000 . . gene_id "MSTRG.132955"; transcript_id "MSTRG.132955.1"; exon_number "1"; scaffold_823 StringTie exon 208343 208584 1000 . . gene_id "MSTRG.132962"; transcript_id "MSTRG.132962.1"; exon_number "1"; scaffold_823 StringTie exon 450980 451212 1000 . . gene_id "MSTRG.132973"; transcript_id "MSTRG.132973.1"; exon_number "1"; scaffold_823 StringTie exon 466282 466540 1000 . . gene_id "MSTRG.132974"; transcript_id "MSTRG.132974.1"; exon_number "1"; scaffold_8230 StringTie exon 231 892 1000 - . gene_id "MSTRG.132975"; transcript_id "MSTRG.132975.1"; exon_number "1"; scaffold_8230 StringTie exon 16289 16331 1000 - . gene_id "MSTRG.132975"; transcript_id "MSTRG.132975.1"; exon_number "2"; scaffold_824 StringTie exon 243081 243328 1000 . . gene_id "MSTRG.133009"; transcript_id "MSTRG.133009.1"; exon_number "1"; scaffold_8241 StringTie exon 26202 26460 1000 . . gene_id "MSTRG.133026"; transcript_id "MSTRG.133026.1"; exon_number "1"; scaffold_8242 StringTie exon 18790 19093 1000 . . gene_id "MSTRG.133028"; transcript_id "MSTRG.133028.1"; exon_number "1"; scaffold_8245 StringTie exon 1915 2521 1000 . . gene_id "MSTRG.133030"; transcript_id "MSTRG.133030.1"; exon_number "1"; scaffold_8249 StringTie exon 13945 14267 1000 . . gene_id "MSTRG.133041"; transcript_id "MSTRG.133041.1"; exon_number "1"; scaffold_825 StringTie exon 304076 304311 1000 . . gene_id "MSTRG.133067"; transcript_id "MSTRG.133067.1"; exon_number "1"; scaffold_8250 StringTie exon 3718 4027 1000 . . gene_id "MSTRG.133078"; transcript_id "MSTRG.133078.1"; exon_number "1"; scaffold_8251 StringTie exon 4941 5157 1000 . . gene_id "MSTRG.133080"; transcript_id "MSTRG.133080.1"; exon_number "1"; scaffold_8258 StringTie exon 25810 25853 1000 + . gene_id "MSTRG.133096"; transcript_id "MSTRG.133096.1"; exon_number "1"; scaffold_8258 StringTie exon 25955 26128 1000 + . gene_id "MSTRG.133096"; transcript_id "MSTRG.133096.1"; exon_number "2"; scaffold_826 StringTie exon 184848 185364 1000 . . gene_id "MSTRG.133112"; transcript_id "MSTRG.133112.1"; exon_number "1"; scaffold_8261 StringTie exon 6250 6704 1000 . . gene_id "MSTRG.133144"; transcript_id "MSTRG.133144.1"; exon_number "1"; scaffold_827 StringTie exon 362774 363322 1000 . . gene_id "MSTRG.133209"; transcript_id "MSTRG.133209.1"; exon_number "1"; scaffold_8271 StringTie exon 25357 27037 1000 + . gene_id "MSTRG.133221"; transcript_id "MSTRG.133221.1"; exon_number "1"; scaffold_8271 StringTie exon 27358 27664 1000 + . gene_id "MSTRG.133221"; transcript_id "MSTRG.133221.1"; exon_number "2"; scaffold_8279 StringTie exon 8207 8763 1000 . . gene_id "MSTRG.133238"; transcript_id "MSTRG.133238.1"; exon_number "1"; scaffold_828 StringTie exon 49261 49937 1000 . . gene_id "MSTRG.133244"; transcript_id "MSTRG.133244.1"; exon_number "1"; scaffold_828 StringTie exon 230472 230775 1000 . . gene_id "MSTRG.133251"; transcript_id "MSTRG.133251.1"; exon_number "1"; scaffold_828 StringTie exon 298900 299110 1000 . . gene_id "MSTRG.133260"; transcript_id "MSTRG.133260.1"; exon_number "1"; scaffold_828 StringTie exon 372122 372432 1000 . . gene_id "MSTRG.133264"; transcript_id "MSTRG.133264.1"; exon_number "1"; scaffold_8280 StringTie exon 3761 3993 1000 + . gene_id "MSTRG.133272"; transcript_id "MSTRG.133272.1"; exon_number "1"; scaffold_8280 StringTie exon 5739 5939 1000 + . gene_id "MSTRG.133272"; transcript_id "MSTRG.133272.1"; exon_number "2"; scaffold_8280 StringTie exon 6116 6337 1000 + . gene_id "MSTRG.133272"; transcript_id "MSTRG.133272.1"; exon_number "3"; scaffold_8280 StringTie exon 6466 6714 1000 + . gene_id "MSTRG.133272"; transcript_id "MSTRG.133272.1"; exon_number "4"; scaffold_8287 StringTie exon 8893 9142 1000 . . gene_id "MSTRG.133284"; transcript_id "MSTRG.133284.1"; exon_number "1"; scaffold_829 StringTie exon 14616 15183 1000 . . gene_id "MSTRG.133289"; transcript_id "MSTRG.133289.1"; exon_number "1"; scaffold_829 StringTie exon 274263 274518 1000 . . gene_id "MSTRG.133303"; transcript_id "MSTRG.133303.1"; exon_number "1"; scaffold_8299 StringTie exon 24720 25009 1000 . . gene_id "MSTRG.133328"; transcript_id "MSTRG.133328.1"; exon_number "1"; scaffold_83 StringTie exon 153413 153453 1000 - . gene_id "MSTRG.133354"; transcript_id "MSTRG.133354.1"; exon_number "1"; scaffold_83 StringTie exon 156864 157099 1000 - . gene_id "MSTRG.133354"; transcript_id "MSTRG.133354.1"; exon_number "2"; scaffold_83 StringTie exon 176598 178072 1000 . . gene_id "MSTRG.133357"; transcript_id "MSTRG.133357.1"; exon_number "1"; scaffold_83 StringTie exon 211502 211947 1000 . . gene_id "MSTRG.133361"; transcript_id "MSTRG.133361.1"; exon_number "1"; scaffold_83 StringTie exon 261139 261486 1000 . . gene_id "MSTRG.133365"; transcript_id "MSTRG.133365.1"; exon_number "1"; scaffold_83 StringTie exon 319761 320095 1000 . . gene_id "MSTRG.133379"; transcript_id "MSTRG.133379.1"; exon_number "1"; scaffold_83 StringTie exon 563223 563381 1000 + . gene_id "MSTRG.133400"; transcript_id "MSTRG.133400.1"; exon_number "1"; scaffold_83 StringTie exon 563540 563581 1000 + . gene_id "MSTRG.133400"; transcript_id "MSTRG.133400.1"; exon_number "2"; scaffold_83 StringTie exon 668657 668773 1000 + . gene_id "MSTRG.133411"; transcript_id "MSTRG.133411.1"; exon_number "1"; scaffold_83 StringTie exon 669081 669243 1000 + . gene_id "MSTRG.133411"; transcript_id "MSTRG.133411.1"; exon_number "2"; scaffold_83 StringTie exon 669378 669487 1000 + . gene_id "MSTRG.133411"; transcript_id "MSTRG.133411.1"; exon_number "3"; scaffold_83 StringTie exon 669680 669799 1000 + . gene_id "MSTRG.133411"; transcript_id "MSTRG.133411.1"; exon_number "4"; scaffold_83 StringTie exon 669891 670044 1000 + . gene_id "MSTRG.133411"; transcript_id "MSTRG.133411.1"; exon_number "5"; scaffold_83 StringTie exon 670250 670321 1000 + . gene_id "MSTRG.133411"; transcript_id "MSTRG.133411.1"; exon_number "6"; scaffold_83 StringTie exon 670507 670548 1000 + . gene_id "MSTRG.133411"; transcript_id "MSTRG.133411.1"; exon_number "7"; scaffold_83 StringTie exon 695742 695977 1000 . . gene_id "MSTRG.133416"; transcript_id "MSTRG.133416.1"; exon_number "1"; scaffold_83 StringTie exon 847195 847455 1000 . . gene_id "MSTRG.133431"; transcript_id "MSTRG.133431.1"; exon_number "1"; scaffold_83 StringTie exon 932629 932947 1000 . . gene_id "MSTRG.133441"; transcript_id "MSTRG.133441.1"; exon_number "1"; scaffold_83 StringTie exon 956027 956207 1000 - . gene_id "MSTRG.133443"; transcript_id "MSTRG.133443.3"; exon_number "1"; scaffold_83 StringTie exon 997414 997941 1000 - . gene_id "MSTRG.133443"; transcript_id "MSTRG.133443.3"; exon_number "2"; scaffold_83 StringTie exon 1028933 1029098 1000 - . gene_id "MSTRG.133443"; transcript_id "MSTRG.133443.3"; exon_number "3"; scaffold_83 StringTie exon 1029240 1029731 1000 - . gene_id "MSTRG.133443"; transcript_id "MSTRG.133443.3"; exon_number "4"; scaffold_83 StringTie exon 1565158 1565298 1000 - . gene_id "MSTRG.133471"; transcript_id "MSTRG.133471.1"; exon_number "1"; scaffold_83 StringTie exon 1565973 1566032 1000 - . gene_id "MSTRG.133471"; transcript_id "MSTRG.133471.1"; exon_number "2"; scaffold_83 StringTie exon 1617616 1617727 1000 - . gene_id "MSTRG.133475"; transcript_id "MSTRG.133475.1"; exon_number "1"; scaffold_83 StringTie exon 1618218 1618545 1000 - . gene_id "MSTRG.133475"; transcript_id "MSTRG.133475.1"; exon_number "2"; scaffold_83 StringTie exon 1748011 1748464 1000 - . gene_id "MSTRG.133483"; transcript_id "MSTRG.133483.1"; exon_number "1"; scaffold_83 StringTie exon 1773453 1773630 1000 - . gene_id "MSTRG.133483"; transcript_id "MSTRG.133483.1"; exon_number "2"; scaffold_830 StringTie exon 39596 39840 1000 . . gene_id "MSTRG.133486"; transcript_id "MSTRG.133486.1"; exon_number "1"; scaffold_830 StringTie exon 121699 121911 1000 . . gene_id "MSTRG.133492"; transcript_id "MSTRG.133492.1"; exon_number "1"; scaffold_830 StringTie exon 134675 135125 1000 . . gene_id "MSTRG.133493"; transcript_id "MSTRG.133493.1"; exon_number "1"; scaffold_8309 StringTie exon 18551 18801 1000 . . gene_id "MSTRG.133525"; transcript_id "MSTRG.133525.1"; exon_number "1"; scaffold_831 StringTie exon 31410 31567 1000 - . gene_id "MSTRG.133528"; transcript_id "MSTRG.133528.2"; exon_number "1"; scaffold_831 StringTie exon 31714 31800 1000 - . gene_id "MSTRG.133528"; transcript_id "MSTRG.133528.2"; exon_number "2"; scaffold_831 StringTie exon 32660 32993 1000 - . gene_id "MSTRG.133528"; transcript_id "MSTRG.133528.2"; exon_number "3"; scaffold_831 StringTie exon 93047 93347 1000 . . gene_id "MSTRG.133531"; transcript_id "MSTRG.133531.1"; exon_number "1"; scaffold_8319 StringTie exon 16419 16679 1000 . . gene_id "MSTRG.133569"; transcript_id "MSTRG.133569.1"; exon_number "1"; scaffold_832 StringTie exon 422128 422702 1000 . . gene_id "MSTRG.133593"; transcript_id "MSTRG.133593.1"; exon_number "1"; scaffold_8320 StringTie exon 4347 4741 1000 . . gene_id "MSTRG.133599"; transcript_id "MSTRG.133599.1"; exon_number "1"; scaffold_8323 StringTie exon 26857 27237 1000 . . gene_id "MSTRG.133608"; transcript_id "MSTRG.133608.1"; exon_number "1"; scaffold_8329 StringTie exon 5833 6147 1000 - . gene_id "MSTRG.133616"; transcript_id "MSTRG.133616.1"; exon_number "1"; scaffold_8329 StringTie exon 6299 6313 1000 - . gene_id "MSTRG.133616"; transcript_id "MSTRG.133616.1"; exon_number "2"; scaffold_8330 StringTie exon 7742 8059 1000 . . gene_id "MSTRG.133670"; transcript_id "MSTRG.133670.1"; exon_number "1"; scaffold_834 StringTie exon 443297 443525 1000 . . gene_id "MSTRG.133721"; transcript_id "MSTRG.133721.1"; exon_number "1"; scaffold_834 StringTie exon 447513 448392 1000 . . gene_id "MSTRG.133722"; transcript_id "MSTRG.133722.1"; exon_number "1"; scaffold_8347 StringTie exon 741 860 1000 + . gene_id "MSTRG.133742"; transcript_id "MSTRG.133742.1"; exon_number "1"; scaffold_8347 StringTie exon 3229 3379 1000 + . gene_id "MSTRG.133742"; transcript_id "MSTRG.133742.1"; exon_number "2"; scaffold_8347 StringTie exon 10081 10241 1000 + . gene_id "MSTRG.133742"; transcript_id "MSTRG.133742.1"; exon_number "3"; scaffold_8347 StringTie exon 27175 27590 1000 . . gene_id "MSTRG.133744"; transcript_id "MSTRG.133744.1"; exon_number "1"; scaffold_8348 StringTie exon 11800 11936 1000 - . gene_id "MSTRG.133747"; transcript_id "MSTRG.133747.1"; exon_number "1"; scaffold_8348 StringTie exon 12882 12949 1000 - . gene_id "MSTRG.133747"; transcript_id "MSTRG.133747.1"; exon_number "2"; scaffold_835 StringTie exon 17539 17758 1000 . . gene_id "MSTRG.133754"; transcript_id "MSTRG.133754.1"; exon_number "1"; scaffold_835 StringTie exon 158439 158816 1000 . . gene_id "MSTRG.133774"; transcript_id "MSTRG.133774.1"; exon_number "1"; scaffold_835 StringTie exon 322534 322752 1000 . . gene_id "MSTRG.133793"; transcript_id "MSTRG.133793.1"; exon_number "1"; scaffold_835 StringTie exon 451563 451875 1000 . . gene_id "MSTRG.133803"; transcript_id "MSTRG.133803.1"; exon_number "1"; scaffold_8358 StringTie exon 19 490 1000 . . gene_id "MSTRG.133813"; transcript_id "MSTRG.133813.1"; exon_number "1"; scaffold_836 StringTie exon 19698 21213 1000 . . gene_id "MSTRG.133816"; transcript_id "MSTRG.133816.1"; exon_number "1"; scaffold_836 StringTie exon 98180 98269 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "1"; scaffold_836 StringTie exon 98773 98839 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "2"; scaffold_836 StringTie exon 98940 99066 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "3"; scaffold_836 StringTie exon 99283 99459 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "4"; scaffold_836 StringTie exon 101048 101215 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "5"; scaffold_836 StringTie exon 102154 102337 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "6"; scaffold_836 StringTie exon 103009 103117 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "7"; scaffold_836 StringTie exon 104310 104466 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "8"; scaffold_836 StringTie exon 104718 104897 1000 + . gene_id "MSTRG.133822"; transcript_id "MSTRG.133822.1"; exon_number "9"; scaffold_8360 StringTie exon 27260 27536 1000 . . gene_id "MSTRG.133850"; transcript_id "MSTRG.133850.1"; exon_number "1"; scaffold_8368 StringTie exon 16420 18045 1000 - . gene_id "MSTRG.133863"; transcript_id "MSTRG.133863.1"; exon_number "1"; scaffold_8368 StringTie exon 18633 18710 1000 - . gene_id "MSTRG.133863"; transcript_id "MSTRG.133863.1"; exon_number "2"; scaffold_8368 StringTie exon 18793 18919 1000 - . gene_id "MSTRG.133863"; transcript_id "MSTRG.133863.1"; exon_number "3"; scaffold_8368 StringTie exon 18983 18999 1000 - . gene_id "MSTRG.133863"; transcript_id "MSTRG.133863.1"; exon_number "4"; scaffold_837 StringTie exon 231393 231763 1000 . . gene_id "MSTRG.133880"; transcript_id "MSTRG.133880.1"; exon_number "1"; scaffold_837 StringTie exon 362564 362603 1000 + . gene_id "MSTRG.133885"; transcript_id "MSTRG.133885.1"; exon_number "1"; scaffold_837 StringTie exon 362782 362963 1000 + . gene_id "MSTRG.133885"; transcript_id "MSTRG.133885.1"; exon_number "2"; scaffold_837 StringTie exon 416778 417032 1000 . . gene_id "MSTRG.133891"; transcript_id "MSTRG.133891.1"; exon_number "1"; scaffold_837 StringTie exon 417643 417800 1000 + . gene_id "MSTRG.133892"; transcript_id "MSTRG.133892.1"; exon_number "1"; scaffold_837 StringTie exon 417895 418420 1000 + . gene_id "MSTRG.133892"; transcript_id "MSTRG.133892.1"; exon_number "2"; scaffold_8371 StringTie exon 13308 13525 1000 . . gene_id "MSTRG.133900"; transcript_id "MSTRG.133900.1"; exon_number "1"; scaffold_8376 StringTie exon 15126 15385 1000 . . gene_id "MSTRG.133909"; transcript_id "MSTRG.133909.1"; exon_number "1"; scaffold_8379 StringTie exon 27238 27536 1000 + . gene_id "MSTRG.133914"; transcript_id "MSTRG.133914.1"; exon_number "1"; scaffold_838 StringTie exon 82156 82356 1000 . . gene_id "MSTRG.133917"; transcript_id "MSTRG.133917.1"; exon_number "1"; scaffold_838 StringTie exon 322786 323038 1000 . . gene_id "MSTRG.133937"; transcript_id "MSTRG.133937.1"; exon_number "1"; scaffold_839 StringTie exon 153290 153501 1000 . . gene_id "MSTRG.133974"; transcript_id "MSTRG.133974.1"; exon_number "1"; scaffold_839 StringTie exon 355388 355646 1000 . . gene_id "MSTRG.133989"; transcript_id "MSTRG.133989.1"; exon_number "1"; scaffold_839 StringTie exon 356399 356741 1000 . . gene_id "MSTRG.133990"; transcript_id "MSTRG.133990.1"; exon_number "1"; scaffold_84 StringTie exon 356801 356906 1000 - . gene_id "MSTRG.134045"; transcript_id "MSTRG.134045.1"; exon_number "1"; scaffold_84 StringTie exon 357519 357630 1000 - . gene_id "MSTRG.134045"; transcript_id "MSTRG.134045.1"; exon_number "2"; scaffold_84 StringTie exon 357808 357962 1000 - . gene_id "MSTRG.134045"; transcript_id "MSTRG.134045.1"; exon_number "3"; scaffold_84 StringTie exon 358472 358595 1000 - . gene_id "MSTRG.134045"; transcript_id "MSTRG.134045.1"; exon_number "4"; scaffold_84 StringTie exon 360175 360258 1000 - . gene_id "MSTRG.134045"; transcript_id "MSTRG.134045.1"; exon_number "5"; scaffold_84 StringTie exon 360355 360477 1000 - . gene_id "MSTRG.134045"; transcript_id "MSTRG.134045.1"; exon_number "6"; scaffold_84 StringTie exon 360559 360610 1000 - . gene_id "MSTRG.134045"; transcript_id "MSTRG.134045.1"; exon_number "7"; scaffold_84 StringTie exon 365724 365845 1000 - . gene_id "MSTRG.134045"; transcript_id "MSTRG.134045.1"; exon_number "8"; scaffold_84 StringTie exon 912781 913077 1000 . . gene_id "MSTRG.134076"; transcript_id "MSTRG.134076.1"; exon_number "1"; scaffold_84 StringTie exon 1024678 1024878 1000 . . gene_id "MSTRG.134080"; transcript_id "MSTRG.134080.1"; exon_number "1"; scaffold_84 StringTie exon 1293869 1294140 1000 . . gene_id "MSTRG.134103"; transcript_id "MSTRG.134103.1"; exon_number "1"; scaffold_84 StringTie exon 1450801 1450912 1000 + . gene_id "MSTRG.134107"; transcript_id "MSTRG.134107.1"; exon_number "1"; scaffold_84 StringTie exon 1451764 1451823 1000 + . gene_id "MSTRG.134107"; transcript_id "MSTRG.134107.1"; exon_number "2"; scaffold_84 StringTie exon 1452173 1452238 1000 + . gene_id "MSTRG.134107"; transcript_id "MSTRG.134107.1"; exon_number "3"; scaffold_84 StringTie exon 1452473 1452538 1000 + . gene_id "MSTRG.134107"; transcript_id "MSTRG.134107.1"; exon_number "4"; scaffold_84 StringTie exon 1452763 1452829 1000 + . gene_id "MSTRG.134107"; transcript_id "MSTRG.134107.1"; exon_number "5"; scaffold_84 StringTie exon 1452989 1453095 1000 + . gene_id "MSTRG.134107"; transcript_id "MSTRG.134107.1"; exon_number "6"; scaffold_84 StringTie exon 1456375 1456395 1000 + . gene_id "MSTRG.134107"; transcript_id "MSTRG.134107.1"; exon_number "7"; scaffold_84 StringTie exon 1577587 1577952 1000 . . gene_id "MSTRG.134123"; transcript_id "MSTRG.134123.1"; exon_number "1"; scaffold_840 StringTie exon 281229 281299 1000 - . gene_id "MSTRG.134156"; transcript_id "MSTRG.134156.1"; exon_number "1"; scaffold_840 StringTie exon 281404 281480 1000 - . gene_id "MSTRG.134156"; transcript_id "MSTRG.134156.1"; exon_number "2"; scaffold_840 StringTie exon 281606 281646 1000 - . gene_id "MSTRG.134156"; transcript_id "MSTRG.134156.1"; exon_number "3"; scaffold_840 StringTie exon 281738 281823 1000 - . gene_id "MSTRG.134156"; transcript_id "MSTRG.134156.1"; exon_number "4"; scaffold_840 StringTie exon 281956 281998 1000 - . gene_id "MSTRG.134156"; transcript_id "MSTRG.134156.1"; exon_number "5"; scaffold_840 StringTie exon 282153 282296 1000 - . gene_id "MSTRG.134156"; transcript_id "MSTRG.134156.1"; exon_number "6"; scaffold_840 StringTie exon 282422 282480 1000 - . gene_id "MSTRG.134156"; transcript_id "MSTRG.134156.1"; exon_number "7"; scaffold_841 StringTie exon 77369 77602 1000 . . gene_id "MSTRG.134187"; transcript_id "MSTRG.134187.1"; exon_number "1"; scaffold_841 StringTie exon 358017 358276 1000 . . gene_id "MSTRG.134197"; transcript_id "MSTRG.134197.1"; exon_number "1"; scaffold_8411 StringTie exon 21269 21470 1000 + . gene_id "MSTRG.134212"; transcript_id "MSTRG.134212.1"; exon_number "1"; scaffold_8411 StringTie exon 21884 22213 1000 + . gene_id "MSTRG.134212"; transcript_id "MSTRG.134212.1"; exon_number "2"; scaffold_8411 StringTie exon 25745 26059 1000 . . gene_id "MSTRG.134214"; transcript_id "MSTRG.134214.1"; exon_number "1"; scaffold_842 StringTie exon 52634 52934 1000 + . gene_id "MSTRG.134236"; transcript_id "MSTRG.134236.1"; exon_number "1"; scaffold_842 StringTie exon 53620 53753 1000 + . gene_id "MSTRG.134236"; transcript_id "MSTRG.134236.1"; exon_number "2"; scaffold_842 StringTie exon 58302 58390 1000 + . gene_id "MSTRG.134236"; transcript_id "MSTRG.134236.1"; exon_number "3"; scaffold_842 StringTie exon 58585 58792 1000 + . gene_id "MSTRG.134236"; transcript_id "MSTRG.134236.1"; exon_number "4"; scaffold_842 StringTie exon 163169 163419 1000 . . gene_id "MSTRG.134251"; transcript_id "MSTRG.134251.1"; exon_number "1"; scaffold_842 StringTie exon 206317 206578 1000 . . gene_id "MSTRG.134257"; transcript_id "MSTRG.134257.1"; exon_number "1"; scaffold_8420 StringTie exon 26300 26600 1000 . . gene_id "MSTRG.134285"; transcript_id "MSTRG.134285.1"; exon_number "1"; scaffold_843 StringTie exon 12904 13384 1000 . . gene_id "MSTRG.134308"; transcript_id "MSTRG.134308.1"; exon_number "1"; scaffold_843 StringTie exon 338600 338915 1000 . . gene_id "MSTRG.134320"; transcript_id "MSTRG.134320.1"; exon_number "1"; scaffold_844 StringTie exon 253240 253687 1000 - . gene_id "MSTRG.134364"; transcript_id "MSTRG.134364.1"; exon_number "1"; scaffold_844 StringTie exon 378178 378425 1000 . . gene_id "MSTRG.134376"; transcript_id "MSTRG.134376.1"; exon_number "1"; scaffold_8441 StringTie exon 4949 5167 1000 . . gene_id "MSTRG.134381"; transcript_id "MSTRG.134381.1"; exon_number "1"; scaffold_8449 StringTie exon 7778 7870 1000 - . gene_id "MSTRG.134394"; transcript_id "MSTRG.134394.1"; exon_number "1"; scaffold_8449 StringTie exon 8065 8184 1000 - . gene_id "MSTRG.134394"; transcript_id "MSTRG.134394.1"; exon_number "2"; scaffold_8449 StringTie exon 8374 8493 1000 - . gene_id "MSTRG.134394"; transcript_id "MSTRG.134394.1"; exon_number "3"; scaffold_8449 StringTie exon 8614 8726 1000 - . gene_id "MSTRG.134394"; transcript_id "MSTRG.134394.1"; exon_number "4"; scaffold_845 StringTie exon 369593 369827 1000 . . gene_id "MSTRG.134417"; transcript_id "MSTRG.134417.1"; exon_number "1"; scaffold_8451 StringTie exon 8312 8646 1000 . . gene_id "MSTRG.134431"; transcript_id "MSTRG.134431.1"; exon_number "1"; scaffold_8452 StringTie exon 9921 10341 1000 - . gene_id "MSTRG.134434"; transcript_id "MSTRG.134434.1"; exon_number "1"; scaffold_8455 StringTie exon 4115 4370 1000 . . gene_id "MSTRG.134442"; transcript_id "MSTRG.134442.1"; exon_number "1"; scaffold_8456 StringTie exon 6574 6773 1000 . . gene_id "MSTRG.134445"; transcript_id "MSTRG.134445.1"; exon_number "1"; scaffold_846 StringTie exon 195793 196067 1000 . . gene_id "MSTRG.134459"; transcript_id "MSTRG.134459.1"; exon_number "1"; scaffold_846 StringTie exon 336324 336382 1000 + . gene_id "MSTRG.134471"; transcript_id "MSTRG.134471.1"; exon_number "1"; scaffold_846 StringTie exon 341349 341546 1000 + . gene_id "MSTRG.134471"; transcript_id "MSTRG.134471.1"; exon_number "2"; scaffold_846 StringTie exon 341741 344054 1000 + . gene_id "MSTRG.134471"; transcript_id "MSTRG.134471.1"; exon_number "3"; scaffold_8461 StringTie exon 15536 15922 1000 . . gene_id "MSTRG.134483"; transcript_id "MSTRG.134483.1"; exon_number "1"; scaffold_8461 StringTie exon 17296 17531 1000 . . gene_id "MSTRG.134485"; transcript_id "MSTRG.134485.1"; exon_number "1"; scaffold_8461 StringTie exon 20831 21144 1000 . . gene_id "MSTRG.134487"; transcript_id "MSTRG.134487.1"; exon_number "1"; scaffold_8466 StringTie exon 8158 8292 1000 + . gene_id "MSTRG.134495"; transcript_id "MSTRG.134495.1"; exon_number "1"; scaffold_8466 StringTie exon 9753 9881 1000 + . gene_id "MSTRG.134495"; transcript_id "MSTRG.134495.1"; exon_number "2"; scaffold_8466 StringTie exon 10045 10116 1000 + . gene_id "MSTRG.134495"; transcript_id "MSTRG.134495.1"; exon_number "3"; scaffold_8466 StringTie exon 10234 11330 1000 + . gene_id "MSTRG.134495"; transcript_id "MSTRG.134495.1"; exon_number "4"; scaffold_8466 StringTie exon 12631 12933 1000 . . gene_id "MSTRG.134496"; transcript_id "MSTRG.134496.1"; exon_number "1"; scaffold_8466 StringTie exon 21703 22329 1000 + . gene_id "MSTRG.134497"; transcript_id "MSTRG.134497.1"; exon_number "1"; scaffold_8468 StringTie exon 18337 18559 1000 . . gene_id "MSTRG.134500"; transcript_id "MSTRG.134500.1"; exon_number "1"; scaffold_847 StringTie exon 130480 130718 1000 . . gene_id "MSTRG.134517"; transcript_id "MSTRG.134517.1"; exon_number "1"; scaffold_847 StringTie exon 142853 143266 1000 . . gene_id "MSTRG.134518"; transcript_id "MSTRG.134518.1"; exon_number "1"; scaffold_848 StringTie exon 114897 115312 1000 . . gene_id "MSTRG.134555"; transcript_id "MSTRG.134555.1"; exon_number "1"; scaffold_8480 StringTie exon 19850 20141 1000 . . gene_id "MSTRG.134575"; transcript_id "MSTRG.134575.1"; exon_number "1"; scaffold_8482 StringTie exon 11177 11428 1000 . . gene_id "MSTRG.134577"; transcript_id "MSTRG.134577.1"; exon_number "1"; scaffold_8486 StringTie exon 414 614 1000 . . gene_id "MSTRG.134581"; transcript_id "MSTRG.134581.1"; exon_number "1"; scaffold_849 StringTie exon 44090 44163 1000 + . gene_id "MSTRG.134596"; transcript_id "MSTRG.134596.1"; exon_number "1"; scaffold_849 StringTie exon 45841 45939 1000 + . gene_id "MSTRG.134596"; transcript_id "MSTRG.134596.1"; exon_number "2"; scaffold_849 StringTie exon 46166 46303 1000 + . gene_id "MSTRG.134596"; transcript_id "MSTRG.134596.1"; exon_number "3"; scaffold_849 StringTie exon 46550 46607 1000 + . gene_id "MSTRG.134596"; transcript_id "MSTRG.134596.1"; exon_number "4"; scaffold_849 StringTie exon 303252 303375 1000 - . gene_id "MSTRG.134620"; transcript_id "MSTRG.134620.1"; exon_number "1"; scaffold_849 StringTie exon 304126 304214 1000 - . gene_id "MSTRG.134620"; transcript_id "MSTRG.134620.1"; exon_number "2"; scaffold_849 StringTie exon 307811 307969 1000 - . gene_id "MSTRG.134622"; transcript_id "MSTRG.134622.1"; exon_number "1"; scaffold_849 StringTie exon 308087 308230 1000 - . gene_id "MSTRG.134622"; transcript_id "MSTRG.134622.1"; exon_number "2"; scaffold_849 StringTie exon 453888 454101 1000 . . gene_id "MSTRG.134632"; transcript_id "MSTRG.134632.1"; exon_number "1"; scaffold_85 StringTie exon 252099 252371 1000 . . gene_id "MSTRG.134665"; transcript_id "MSTRG.134665.1"; exon_number "1"; scaffold_85 StringTie exon 451166 451480 1000 . . gene_id "MSTRG.134677"; transcript_id "MSTRG.134677.1"; exon_number "1"; scaffold_85 StringTie exon 1578274 1578474 1000 . . gene_id "MSTRG.134722"; transcript_id "MSTRG.134722.1"; exon_number "1"; scaffold_85 StringTie exon 1583992 1584235 1000 - . gene_id "MSTRG.134723"; transcript_id "MSTRG.134723.1"; exon_number "1"; scaffold_85 StringTie exon 1664220 1664427 1000 + . gene_id "MSTRG.134726"; transcript_id "MSTRG.134726.1"; exon_number "1"; scaffold_85 StringTie exon 1664648 1664760 1000 + . gene_id "MSTRG.134726"; transcript_id "MSTRG.134726.1"; exon_number "2"; scaffold_85 StringTie exon 1676330 1676438 1000 + . gene_id "MSTRG.134726"; transcript_id "MSTRG.134726.1"; exon_number "3"; scaffold_85 StringTie exon 1700137 1700350 1000 . . gene_id "MSTRG.134730"; transcript_id "MSTRG.134730.1"; exon_number "1"; scaffold_850 StringTie exon 291983 292271 1000 . . gene_id "MSTRG.134751"; transcript_id "MSTRG.134751.1"; exon_number "1"; scaffold_8508 StringTie exon 2856 3264 1000 . . gene_id "MSTRG.134777"; transcript_id "MSTRG.134777.1"; exon_number "1"; scaffold_851 StringTie exon 440 549 1000 - . gene_id "MSTRG.134783"; transcript_id "MSTRG.134783.1"; exon_number "1"; scaffold_851 StringTie exon 814 949 1000 - . gene_id "MSTRG.134783"; transcript_id "MSTRG.134783.1"; exon_number "2"; scaffold_851 StringTie exon 51117 51571 1000 . . gene_id "MSTRG.134786"; transcript_id "MSTRG.134786.1"; exon_number "1"; scaffold_851 StringTie exon 81771 82254 1000 . . gene_id "MSTRG.134788"; transcript_id "MSTRG.134788.1"; exon_number "1"; scaffold_851 StringTie exon 447178 447527 1000 . . gene_id "MSTRG.134815"; transcript_id "MSTRG.134815.1"; exon_number "1"; scaffold_8513 StringTie exon 7817 8880 1000 . . gene_id "MSTRG.134823"; transcript_id "MSTRG.134823.1"; exon_number "1"; scaffold_8517 StringTie exon 21849 22418 1000 . . gene_id "MSTRG.134845"; transcript_id "MSTRG.134845.1"; exon_number "1"; scaffold_852 StringTie exon 183136 183372 1000 . . gene_id "MSTRG.134861"; transcript_id "MSTRG.134861.1"; exon_number "1"; scaffold_852 StringTie exon 303970 304387 1000 . . gene_id "MSTRG.134870"; transcript_id "MSTRG.134870.1"; exon_number "1"; scaffold_8521 StringTie exon 22198 22590 1000 . . gene_id "MSTRG.134892"; transcript_id "MSTRG.134892.1"; exon_number "1"; scaffold_853 StringTie exon 62805 62930 1000 + . gene_id "MSTRG.134918"; transcript_id "MSTRG.134918.1"; exon_number "1"; scaffold_853 StringTie exon 64548 64675 1000 + . gene_id "MSTRG.134918"; transcript_id "MSTRG.134918.1"; exon_number "2"; scaffold_853 StringTie exon 64843 64987 1000 + . gene_id "MSTRG.134918"; transcript_id "MSTRG.134918.1"; exon_number "3"; scaffold_853 StringTie exon 65469 65528 1000 + . gene_id "MSTRG.134918"; transcript_id "MSTRG.134918.1"; exon_number "4"; scaffold_853 StringTie exon 65801 65961 1000 + . gene_id "MSTRG.134918"; transcript_id "MSTRG.134918.1"; exon_number "5"; scaffold_853 StringTie exon 169808 169841 1000 + . gene_id "MSTRG.134929"; transcript_id "MSTRG.134929.1"; exon_number "1"; scaffold_853 StringTie exon 174522 174690 1000 + . gene_id "MSTRG.134929"; transcript_id "MSTRG.134929.1"; exon_number "2"; scaffold_853 StringTie exon 246210 246568 1000 . . gene_id "MSTRG.134940"; transcript_id "MSTRG.134940.1"; exon_number "1"; scaffold_853 StringTie exon 297810 297971 1000 + . gene_id "MSTRG.134945"; transcript_id "MSTRG.134945.4"; exon_number "1"; scaffold_853 StringTie exon 298136 298244 1000 + . gene_id "MSTRG.134945"; transcript_id "MSTRG.134945.4"; exon_number "2"; scaffold_853 StringTie exon 300838 300863 1000 + . gene_id "MSTRG.134945"; transcript_id "MSTRG.134945.4"; exon_number "3"; scaffold_853 StringTie exon 322094 322329 1000 . . gene_id "MSTRG.134951"; transcript_id "MSTRG.134951.1"; exon_number "1"; scaffold_8530 StringTie exon 18909 19154 1000 . . gene_id "MSTRG.134977"; transcript_id "MSTRG.134977.1"; exon_number "1"; scaffold_8537 StringTie exon 4955 5182 1000 . . gene_id "MSTRG.134996"; transcript_id "MSTRG.134996.1"; exon_number "1"; scaffold_854 StringTie exon 278787 279322 1000 . . gene_id "MSTRG.135031"; transcript_id "MSTRG.135031.1"; exon_number "1"; scaffold_854 StringTie exon 297798 298094 1000 . . gene_id "MSTRG.135032"; transcript_id "MSTRG.135032.1"; exon_number "1"; scaffold_854 StringTie exon 330998 331065 1000 - . gene_id "MSTRG.135037"; transcript_id "MSTRG.135037.1"; exon_number "1"; scaffold_854 StringTie exon 331935 332030 1000 - . gene_id "MSTRG.135037"; transcript_id "MSTRG.135037.1"; exon_number "2"; scaffold_854 StringTie exon 332133 332184 1000 - . gene_id "MSTRG.135037"; transcript_id "MSTRG.135037.1"; exon_number "3"; scaffold_8541 StringTie exon 13989 14315 1000 . . gene_id "MSTRG.135042"; transcript_id "MSTRG.135042.1"; exon_number "1"; scaffold_8548 StringTie exon 5656 5928 1000 . . gene_id "MSTRG.135050"; transcript_id "MSTRG.135050.1"; exon_number "1"; scaffold_855 StringTie exon 177538 177777 1000 . . gene_id "MSTRG.135065"; transcript_id "MSTRG.135065.1"; exon_number "1"; scaffold_855 StringTie exon 428557 428790 1000 . . gene_id "MSTRG.135081"; transcript_id "MSTRG.135081.1"; exon_number "1"; scaffold_856 StringTie exon 95486 95612 1000 - . gene_id "MSTRG.135113"; transcript_id "MSTRG.135113.1"; exon_number "1"; scaffold_856 StringTie exon 100099 100171 1000 - . gene_id "MSTRG.135113"; transcript_id "MSTRG.135113.1"; exon_number "2"; scaffold_856 StringTie exon 100592 100696 1000 - . gene_id "MSTRG.135113"; transcript_id "MSTRG.135113.1"; exon_number "3"; scaffold_856 StringTie exon 102031 102189 1000 - . gene_id "MSTRG.135113"; transcript_id "MSTRG.135113.1"; exon_number "4"; scaffold_856 StringTie exon 102602 102637 1000 - . gene_id "MSTRG.135113"; transcript_id "MSTRG.135113.1"; exon_number "5"; scaffold_856 StringTie exon 197675 197878 1000 . . gene_id "MSTRG.135121"; transcript_id "MSTRG.135121.1"; exon_number "1"; scaffold_856 StringTie exon 212992 213205 1000 . . gene_id "MSTRG.135123"; transcript_id "MSTRG.135123.1"; exon_number "1"; scaffold_8564 StringTie exon 26156 26364 1000 . . gene_id "MSTRG.135164"; transcript_id "MSTRG.135164.1"; exon_number "1"; scaffold_8565 StringTie exon 15346 15618 1000 . . gene_id "MSTRG.135165"; transcript_id "MSTRG.135165.1"; exon_number "1"; scaffold_857 StringTie exon 46480 46749 1000 . . gene_id "MSTRG.135181"; transcript_id "MSTRG.135181.1"; exon_number "1"; scaffold_857 StringTie exon 220150 220197 1000 + . gene_id "MSTRG.135202"; transcript_id "MSTRG.135202.1"; exon_number "1"; scaffold_857 StringTie exon 220455 220647 1000 + . gene_id "MSTRG.135202"; transcript_id "MSTRG.135202.1"; exon_number "2"; scaffold_857 StringTie exon 220745 220788 1000 + . gene_id "MSTRG.135202"; transcript_id "MSTRG.135202.1"; exon_number "3"; scaffold_857 StringTie exon 220947 220975 1000 + . gene_id "MSTRG.135202"; transcript_id "MSTRG.135202.1"; exon_number "4"; scaffold_857 StringTie exon 343768 343981 1000 . . gene_id "MSTRG.135212"; transcript_id "MSTRG.135212.1"; exon_number "1"; scaffold_857 StringTie exon 356923 357182 1000 . . gene_id "MSTRG.135217"; transcript_id "MSTRG.135217.1"; exon_number "1"; scaffold_857 StringTie exon 377975 378019 1000 - . gene_id "MSTRG.135222"; transcript_id "MSTRG.135222.1"; exon_number "1"; scaffold_857 StringTie exon 378319 378447 1000 - . gene_id "MSTRG.135222"; transcript_id "MSTRG.135222.1"; exon_number "2"; scaffold_857 StringTie exon 379363 379421 1000 - . gene_id "MSTRG.135222"; transcript_id "MSTRG.135222.1"; exon_number "3"; scaffold_857 StringTie exon 379664 379746 1000 - . gene_id "MSTRG.135222"; transcript_id "MSTRG.135222.1"; exon_number "4"; scaffold_857 StringTie exon 380576 380657 1000 - . gene_id "MSTRG.135222"; transcript_id "MSTRG.135222.1"; exon_number "5"; scaffold_857 StringTie exon 381397 381434 1000 - . gene_id "MSTRG.135222"; transcript_id "MSTRG.135222.1"; exon_number "6"; scaffold_858 StringTie exon 52490 52710 1000 . . gene_id "MSTRG.135250"; transcript_id "MSTRG.135250.1"; exon_number "1"; scaffold_858 StringTie exon 314285 314432 1000 + . gene_id "MSTRG.135270"; transcript_id "MSTRG.135270.1"; exon_number "1"; scaffold_858 StringTie exon 358102 358215 1000 + . gene_id "MSTRG.135270"; transcript_id "MSTRG.135270.1"; exon_number "2"; scaffold_8581 StringTie exon 3117 3423 1000 . . gene_id "MSTRG.135285"; transcript_id "MSTRG.135285.1"; exon_number "1"; scaffold_8584 StringTie exon 4488 5164 1000 - . gene_id "MSTRG.135292"; transcript_id "MSTRG.135292.1"; exon_number "1"; scaffold_8584 StringTie exon 8587 8596 1000 - . gene_id "MSTRG.135292"; transcript_id "MSTRG.135292.1"; exon_number "2"; scaffold_859 StringTie exon 89424 89672 1000 . . gene_id "MSTRG.135309"; transcript_id "MSTRG.135309.1"; exon_number "1"; scaffold_859 StringTie exon 157283 157471 1000 + . gene_id "MSTRG.135321"; transcript_id "MSTRG.135321.1"; exon_number "1"; scaffold_859 StringTie exon 157754 157787 1000 + . gene_id "MSTRG.135321"; transcript_id "MSTRG.135321.1"; exon_number "2"; scaffold_859 StringTie exon 245602 246036 1000 . . gene_id "MSTRG.135326"; transcript_id "MSTRG.135326.1"; exon_number "1"; scaffold_859 StringTie exon 304556 304652 1000 + . gene_id "MSTRG.135332"; transcript_id "MSTRG.135332.1"; exon_number "1"; scaffold_859 StringTie exon 304965 305111 1000 + . gene_id "MSTRG.135332"; transcript_id "MSTRG.135332.1"; exon_number "2"; scaffold_859 StringTie exon 306295 306353 1000 + . gene_id "MSTRG.135332"; transcript_id "MSTRG.135332.1"; exon_number "3"; scaffold_859 StringTie exon 306622 306690 1000 + . gene_id "MSTRG.135332"; transcript_id "MSTRG.135332.1"; exon_number "4"; scaffold_859 StringTie exon 307087 307100 1000 + . gene_id "MSTRG.135332"; transcript_id "MSTRG.135332.1"; exon_number "5"; scaffold_859 StringTie exon 442376 442633 1000 . . gene_id "MSTRG.135339"; transcript_id "MSTRG.135339.1"; exon_number "1"; scaffold_8593 StringTie exon 6923 7283 1000 . . gene_id "MSTRG.135356"; transcript_id "MSTRG.135356.1"; exon_number "1"; scaffold_8593 StringTie exon 7602 8249 1000 . . gene_id "MSTRG.135357"; transcript_id "MSTRG.135357.1"; exon_number "1"; scaffold_86 StringTie exon 383748 384023 1000 . . gene_id "MSTRG.135381"; transcript_id "MSTRG.135381.1"; exon_number "1"; scaffold_86 StringTie exon 747941 748331 1000 . . gene_id "MSTRG.135401"; transcript_id "MSTRG.135401.1"; exon_number "1"; scaffold_86 StringTie exon 1287051 1287484 1000 . . gene_id "MSTRG.135439"; transcript_id "MSTRG.135439.1"; exon_number "1"; scaffold_86 StringTie exon 1350904 1350961 1000 + . gene_id "MSTRG.135446"; transcript_id "MSTRG.135446.1"; exon_number "1"; scaffold_86 StringTie exon 1351198 1351215 1000 + . gene_id "MSTRG.135446"; transcript_id "MSTRG.135446.1"; exon_number "2"; scaffold_86 StringTie exon 1351677 1351811 1000 + . gene_id "MSTRG.135446"; transcript_id "MSTRG.135446.1"; exon_number "3"; scaffold_86 StringTie exon 1354603 1354757 1000 + . gene_id "MSTRG.135446"; transcript_id "MSTRG.135446.1"; exon_number "4"; scaffold_86 StringTie exon 1569590 1569841 1000 . . gene_id "MSTRG.135463"; transcript_id "MSTRG.135463.1"; exon_number "1"; scaffold_86 StringTie exon 1671776 1671791 1000 + . gene_id "MSTRG.135470"; transcript_id "MSTRG.135470.2"; exon_number "1"; scaffold_86 StringTie exon 1673859 1673985 1000 + . gene_id "MSTRG.135470"; transcript_id "MSTRG.135470.2"; exon_number "2"; scaffold_86 StringTie exon 1684026 1684205 1000 + . gene_id "MSTRG.135470"; transcript_id "MSTRG.135470.2"; exon_number "3"; scaffold_86 StringTie exon 1698296 1698613 1000 . . gene_id "MSTRG.135476"; transcript_id "MSTRG.135476.1"; exon_number "1"; scaffold_86 StringTie exon 1718171 1718346 1000 - . gene_id "MSTRG.135479"; transcript_id "MSTRG.135479.1"; exon_number "1"; scaffold_86 StringTie exon 1722489 1722604 1000 - . gene_id "MSTRG.135479"; transcript_id "MSTRG.135479.1"; exon_number "2"; scaffold_860 StringTie exon 40872 41196 1000 . . gene_id "MSTRG.135486"; transcript_id "MSTRG.135486.1"; exon_number "1"; scaffold_860 StringTie exon 198196 198544 1000 . . gene_id "MSTRG.135499"; transcript_id "MSTRG.135499.1"; exon_number "1"; scaffold_8601 StringTie exon 16733 16961 1000 . . gene_id "MSTRG.135527"; transcript_id "MSTRG.135527.1"; exon_number "1"; scaffold_861 StringTie exon 140389 140791 1000 . . gene_id "MSTRG.135540"; transcript_id "MSTRG.135540.1"; exon_number "1"; scaffold_861 StringTie exon 248545 248902 1000 . . gene_id "MSTRG.135552"; transcript_id "MSTRG.135552.1"; exon_number "1"; scaffold_861 StringTie exon 302850 303128 1000 . . gene_id "MSTRG.135555"; transcript_id "MSTRG.135555.1"; exon_number "1"; scaffold_8610 StringTie exon 7525 7912 1000 . . gene_id "MSTRG.135565"; transcript_id "MSTRG.135565.1"; exon_number "1"; scaffold_862 StringTie exon 120084 120595 1000 - . gene_id "MSTRG.135590"; transcript_id "MSTRG.135590.1"; exon_number "1"; scaffold_862 StringTie exon 127222 127289 1000 - . gene_id "MSTRG.135590"; transcript_id "MSTRG.135590.1"; exon_number "2"; scaffold_862 StringTie exon 127788 127921 1000 - . gene_id "MSTRG.135590"; transcript_id "MSTRG.135590.1"; exon_number "3"; scaffold_862 StringTie exon 128015 128112 1000 - . gene_id "MSTRG.135590"; transcript_id "MSTRG.135590.1"; exon_number "4"; scaffold_862 StringTie exon 128943 129095 1000 - . gene_id "MSTRG.135590"; transcript_id "MSTRG.135590.1"; exon_number "5"; scaffold_862 StringTie exon 129298 129465 1000 - . gene_id "MSTRG.135590"; transcript_id "MSTRG.135590.1"; exon_number "6"; scaffold_862 StringTie exon 272568 272764 1000 + . gene_id "MSTRG.135601"; transcript_id "MSTRG.135601.1"; exon_number "1"; scaffold_862 StringTie exon 274064 274250 1000 + . gene_id "MSTRG.135601"; transcript_id "MSTRG.135601.1"; exon_number "2"; scaffold_862 StringTie exon 279353 279514 1000 + . gene_id "MSTRG.135601"; transcript_id "MSTRG.135601.1"; exon_number "3"; scaffold_862 StringTie exon 280478 280574 1000 + . gene_id "MSTRG.135601"; transcript_id "MSTRG.135601.1"; exon_number "4"; scaffold_862 StringTie exon 283677 283845 1000 + . gene_id "MSTRG.135601"; transcript_id "MSTRG.135601.1"; exon_number "5"; scaffold_862 StringTie exon 292195 292327 1000 + . gene_id "MSTRG.135601"; transcript_id "MSTRG.135601.1"; exon_number "6"; scaffold_862 StringTie exon 295048 295237 1000 + . gene_id "MSTRG.135601"; transcript_id "MSTRG.135601.1"; exon_number "7"; scaffold_862 StringTie exon 308354 309823 1000 . . gene_id "MSTRG.135604"; transcript_id "MSTRG.135604.1"; exon_number "1"; scaffold_862 StringTie exon 369332 369572 1000 . . gene_id "MSTRG.135611"; transcript_id "MSTRG.135611.1"; exon_number "1"; scaffold_8621 StringTie exon 8148 8600 1000 . . gene_id "MSTRG.135620"; transcript_id "MSTRG.135620.1"; exon_number "1"; scaffold_8626 StringTie exon 10570 10832 1000 . . gene_id "MSTRG.135632"; transcript_id "MSTRG.135632.1"; exon_number "1"; scaffold_8629 StringTie exon 17949 18122 1000 + . gene_id "MSTRG.135638"; transcript_id "MSTRG.135638.1"; exon_number "1"; scaffold_8629 StringTie exon 24203 25334 1000 + . gene_id "MSTRG.135638"; transcript_id "MSTRG.135638.1"; exon_number "2"; scaffold_863 StringTie exon 73944 74145 1000 . . gene_id "MSTRG.135644"; transcript_id "MSTRG.135644.1"; exon_number "1"; scaffold_863 StringTie exon 103789 104085 1000 . . gene_id "MSTRG.135647"; transcript_id "MSTRG.135647.1"; exon_number "1"; scaffold_863 StringTie exon 121202 121565 1000 . . gene_id "MSTRG.135649"; transcript_id "MSTRG.135649.1"; exon_number "1"; scaffold_8634 StringTie exon 23412 23705 1000 . . gene_id "MSTRG.135667"; transcript_id "MSTRG.135667.1"; exon_number "1"; scaffold_8636 StringTie exon 25967 26406 1000 . . gene_id "MSTRG.135674"; transcript_id "MSTRG.135674.1"; exon_number "1"; scaffold_864 StringTie exon 318901 319234 1000 . . gene_id "MSTRG.135703"; transcript_id "MSTRG.135703.1"; exon_number "1"; scaffold_8644 StringTie exon 5801 6149 1000 . . gene_id "MSTRG.135716"; transcript_id "MSTRG.135716.1"; exon_number "1"; scaffold_8648 StringTie exon 1590 3224 1000 . . gene_id "MSTRG.135726"; transcript_id "MSTRG.135726.1"; exon_number "1"; scaffold_865 StringTie exon 396809 396818 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "1"; scaffold_865 StringTie exon 432609 432634 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "2"; scaffold_865 StringTie exon 432958 433059 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "3"; scaffold_865 StringTie exon 433714 433896 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "4"; scaffold_865 StringTie exon 434125 434362 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "5"; scaffold_865 StringTie exon 434693 434775 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "6"; scaffold_865 StringTie exon 434987 435146 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "7"; scaffold_865 StringTie exon 436066 436220 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "8"; scaffold_865 StringTie exon 436322 436485 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "9"; scaffold_865 StringTie exon 437241 437382 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "10"; scaffold_865 StringTie exon 437801 438100 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "11"; scaffold_865 StringTie exon 438274 438348 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "12"; scaffold_865 StringTie exon 439287 439526 1000 - . gene_id "MSTRG.135753"; transcript_id "MSTRG.135753.1"; exon_number "13"; scaffold_8652 StringTie exon 24065 24222 1000 + . gene_id "MSTRG.135771"; transcript_id "MSTRG.135771.1"; exon_number "1"; scaffold_8652 StringTie exon 25493 25679 1000 + . gene_id "MSTRG.135771"; transcript_id "MSTRG.135771.1"; exon_number "2"; scaffold_8652 StringTie exon 26044 26161 1000 + . gene_id "MSTRG.135771"; transcript_id "MSTRG.135771.1"; exon_number "3"; scaffold_8658 StringTie exon 17410 17625 1000 . . gene_id "MSTRG.135783"; transcript_id "MSTRG.135783.1"; exon_number "1"; scaffold_8659 StringTie exon 22715 23973 1000 . . gene_id "MSTRG.135787"; transcript_id "MSTRG.135787.1"; exon_number "1"; scaffold_866 StringTie exon 176487 176824 1000 . . gene_id "MSTRG.135805"; transcript_id "MSTRG.135805.1"; exon_number "1"; scaffold_866 StringTie exon 194208 194660 1000 + . gene_id "MSTRG.135807"; transcript_id "MSTRG.135807.1"; exon_number "1"; scaffold_866 StringTie exon 194825 194944 1000 + . gene_id "MSTRG.135807"; transcript_id "MSTRG.135807.1"; exon_number "2"; scaffold_866 StringTie exon 202162 202269 1000 + . gene_id "MSTRG.135807"; transcript_id "MSTRG.135807.1"; exon_number "3"; scaffold_866 StringTie exon 202389 202476 1000 + . gene_id "MSTRG.135807"; transcript_id "MSTRG.135807.1"; exon_number "4"; scaffold_866 StringTie exon 202796 202939 1000 + . gene_id "MSTRG.135807"; transcript_id "MSTRG.135807.1"; exon_number "5"; scaffold_866 StringTie exon 203024 203233 1000 + . gene_id "MSTRG.135807"; transcript_id "MSTRG.135807.1"; exon_number "6"; scaffold_866 StringTie exon 203542 203737 1000 + . gene_id "MSTRG.135807"; transcript_id "MSTRG.135807.1"; exon_number "7"; scaffold_8661 StringTie exon 17534 17974 1000 . . gene_id "MSTRG.135821"; transcript_id "MSTRG.135821.1"; exon_number "1"; scaffold_8666 StringTie exon 13737 14001 1000 . . gene_id "MSTRG.135830"; transcript_id "MSTRG.135830.1"; exon_number "1"; scaffold_8666 StringTie exon 23142 23547 1000 - . gene_id "MSTRG.135832"; transcript_id "MSTRG.135832.2"; exon_number "1"; scaffold_8666 StringTie exon 24622 24714 1000 - . gene_id "MSTRG.135832"; transcript_id "MSTRG.135832.2"; exon_number "2"; scaffold_8666 StringTie exon 26029 26131 1000 - . gene_id "MSTRG.135832"; transcript_id "MSTRG.135832.2"; exon_number "3"; scaffold_867 StringTie exon 179916 180235 1000 - . gene_id "MSTRG.135846"; transcript_id "MSTRG.135846.1"; exon_number "1"; scaffold_867 StringTie exon 223288 223524 1000 . . gene_id "MSTRG.135849"; transcript_id "MSTRG.135849.1"; exon_number "1"; scaffold_867 StringTie exon 322652 322948 1000 . . gene_id "MSTRG.135854"; transcript_id "MSTRG.135854.1"; exon_number "1"; scaffold_868 StringTie exon 355270 356064 1000 . . gene_id "MSTRG.135899"; transcript_id "MSTRG.135899.1"; exon_number "1"; scaffold_869 StringTie exon 90407 91213 1000 . . gene_id "MSTRG.135941"; transcript_id "MSTRG.135941.1"; exon_number "1"; scaffold_869 StringTie exon 113131 113165 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.1"; exon_number "1"; scaffold_869 StringTie exon 114365 114613 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.1"; exon_number "2"; scaffold_869 StringTie exon 115316 115466 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.1"; exon_number "3"; scaffold_869 StringTie exon 115583 115636 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.1"; exon_number "4"; scaffold_869 StringTie exon 116801 117486 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.1"; exon_number "5"; scaffold_869 StringTie exon 114381 114441 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.2"; exon_number "1"; scaffold_869 StringTie exon 114519 114613 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.2"; exon_number "2"; scaffold_869 StringTie exon 115316 115466 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.2"; exon_number "3"; scaffold_869 StringTie exon 115583 115636 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.2"; exon_number "4"; scaffold_869 StringTie exon 116801 117486 1000 + . gene_id "MSTRG.135944"; transcript_id "MSTRG.135944.2"; exon_number "5"; scaffold_869 StringTie exon 407487 407753 1000 . . gene_id "MSTRG.135973"; transcript_id "MSTRG.135973.1"; exon_number "1"; scaffold_8696 StringTie exon 12392 12603 1000 . . gene_id "MSTRG.135989"; transcript_id "MSTRG.135989.1"; exon_number "1"; scaffold_87 StringTie exon 432969 433042 1000 - . gene_id "MSTRG.136019"; transcript_id "MSTRG.136019.1"; exon_number "1"; scaffold_87 StringTie exon 433188 433301 1000 - . gene_id "MSTRG.136019"; transcript_id "MSTRG.136019.1"; exon_number "2"; scaffold_87 StringTie exon 437348 437430 1000 - . gene_id "MSTRG.136019"; transcript_id "MSTRG.136019.1"; exon_number "3"; scaffold_87 StringTie exon 641306 641543 1000 . . gene_id "MSTRG.136035"; transcript_id "MSTRG.136035.1"; exon_number "1"; scaffold_87 StringTie exon 744462 744693 1000 . . gene_id "MSTRG.136046"; transcript_id "MSTRG.136046.1"; exon_number "1"; scaffold_87 StringTie exon 870798 871175 1000 . . gene_id "MSTRG.136055"; transcript_id "MSTRG.136055.1"; exon_number "1"; scaffold_87 StringTie exon 881132 881521 1000 . . gene_id "MSTRG.136056"; transcript_id "MSTRG.136056.1"; exon_number "1"; scaffold_87 StringTie exon 1058740 1058970 1000 . . gene_id "MSTRG.136070"; transcript_id "MSTRG.136070.1"; exon_number "1"; scaffold_87 StringTie exon 1224274 1224691 1000 . . gene_id "MSTRG.136081"; transcript_id "MSTRG.136081.1"; exon_number "1"; scaffold_870 StringTie exon 88015 88228 1000 . . gene_id "MSTRG.136111"; transcript_id "MSTRG.136111.1"; exon_number "1"; scaffold_870 StringTie exon 264900 265114 1000 . . gene_id "MSTRG.136127"; transcript_id "MSTRG.136127.1"; exon_number "1"; scaffold_870 StringTie exon 363125 363348 1000 . . gene_id "MSTRG.136138"; transcript_id "MSTRG.136138.1"; exon_number "1"; scaffold_8700 StringTie exon 19770 20760 1000 . . gene_id "MSTRG.136166"; transcript_id "MSTRG.136166.1"; exon_number "1"; scaffold_8701 StringTie exon 25618 26208 1000 . . gene_id "MSTRG.136167"; transcript_id "MSTRG.136167.1"; exon_number "1"; scaffold_8707 StringTie exon 17542 17821 1000 . . gene_id "MSTRG.136173"; transcript_id "MSTRG.136173.1"; exon_number "1"; scaffold_8709 StringTie exon 11060 11294 1000 . . gene_id "MSTRG.136176"; transcript_id "MSTRG.136176.1"; exon_number "1"; scaffold_8710 StringTie exon 13471 13850 1000 . . gene_id "MSTRG.136199"; transcript_id "MSTRG.136199.1"; exon_number "1"; scaffold_8711 StringTie exon 13736 14282 1000 . . gene_id "MSTRG.136206"; transcript_id "MSTRG.136206.1"; exon_number "1"; scaffold_872 StringTie exon 91312 91577 1000 . . gene_id "MSTRG.136231"; transcript_id "MSTRG.136231.1"; exon_number "1"; scaffold_872 StringTie exon 222225 222472 1000 . . gene_id "MSTRG.136234"; transcript_id "MSTRG.136234.1"; exon_number "1"; scaffold_8721 StringTie exon 7151 7572 1000 . . gene_id "MSTRG.136245"; transcript_id "MSTRG.136245.1"; exon_number "1"; scaffold_8723 StringTie exon 16362 16800 1000 . . gene_id "MSTRG.136249"; transcript_id "MSTRG.136249.1"; exon_number "1"; scaffold_873 StringTie exon 190761 190797 1000 - . gene_id "MSTRG.136286"; transcript_id "MSTRG.136286.1"; exon_number "1"; scaffold_873 StringTie exon 191005 191175 1000 - . gene_id "MSTRG.136286"; transcript_id "MSTRG.136286.1"; exon_number "2"; scaffold_874 StringTie exon 138378 138579 1000 . . gene_id "MSTRG.136333"; transcript_id "MSTRG.136333.1"; exon_number "1"; scaffold_874 StringTie exon 228046 228310 1000 . . gene_id "MSTRG.136340"; transcript_id "MSTRG.136340.1"; exon_number "1"; scaffold_8746 StringTie exon 4889 5125 1000 . . gene_id "MSTRG.136360"; transcript_id "MSTRG.136360.1"; exon_number "1"; scaffold_8755 StringTie exon 11377 11660 1000 . . gene_id "MSTRG.136407"; transcript_id "MSTRG.136407.1"; exon_number "1"; scaffold_8756 StringTie exon 12899 13150 1000 . . gene_id "MSTRG.136409"; transcript_id "MSTRG.136409.1"; exon_number "1"; scaffold_876 StringTie exon 51182 51354 1000 + . gene_id "MSTRG.136417"; transcript_id "MSTRG.136417.1"; exon_number "1"; scaffold_876 StringTie exon 51646 52143 1000 + . gene_id "MSTRG.136417"; transcript_id "MSTRG.136417.1"; exon_number "2"; scaffold_876 StringTie exon 70339 70435 1000 + . gene_id "MSTRG.136421"; transcript_id "MSTRG.136421.1"; exon_number "1"; scaffold_876 StringTie exon 70543 70701 1000 + . gene_id "MSTRG.136421"; transcript_id "MSTRG.136421.1"; exon_number "2"; scaffold_876 StringTie exon 70835 70848 1000 + . gene_id "MSTRG.136421"; transcript_id "MSTRG.136421.1"; exon_number "3"; scaffold_876 StringTie exon 400520 400753 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "1"; scaffold_876 StringTie exon 400903 401095 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "2"; scaffold_876 StringTie exon 401259 401393 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "3"; scaffold_876 StringTie exon 401850 402158 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "4"; scaffold_876 StringTie exon 402279 402547 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "5"; scaffold_876 StringTie exon 402837 402954 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "6"; scaffold_876 StringTie exon 403051 403185 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "7"; scaffold_876 StringTie exon 403283 403396 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "8"; scaffold_876 StringTie exon 403561 403764 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "9"; scaffold_876 StringTie exon 404678 404737 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "10"; scaffold_876 StringTie exon 404944 405060 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "11"; scaffold_876 StringTie exon 410546 410677 1000 - . gene_id "MSTRG.136454"; transcript_id "MSTRG.136454.1"; exon_number "12"; scaffold_876 StringTie exon 445136 445348 1000 . . gene_id "MSTRG.136459"; transcript_id "MSTRG.136459.1"; exon_number "1"; scaffold_8764 StringTie exon 11823 12237 1000 . . gene_id "MSTRG.136466"; transcript_id "MSTRG.136466.1"; exon_number "1"; scaffold_877 StringTie exon 9073 9324 1000 . . gene_id "MSTRG.136474"; transcript_id "MSTRG.136474.1"; exon_number "1"; scaffold_877 StringTie exon 106713 106933 1000 . . gene_id "MSTRG.136478"; transcript_id "MSTRG.136478.1"; exon_number "1"; scaffold_877 StringTie exon 233048 233392 1000 . . gene_id "MSTRG.136483"; transcript_id "MSTRG.136483.1"; exon_number "1"; scaffold_877 StringTie exon 264709 264732 1000 + . gene_id "MSTRG.136486"; transcript_id "MSTRG.136486.1"; exon_number "1"; scaffold_877 StringTie exon 265342 265428 1000 + . gene_id "MSTRG.136486"; transcript_id "MSTRG.136486.1"; exon_number "2"; scaffold_877 StringTie exon 265964 266080 1000 + . gene_id "MSTRG.136486"; transcript_id "MSTRG.136486.1"; exon_number "3"; scaffold_877 StringTie exon 266258 266356 1000 + . gene_id "MSTRG.136486"; transcript_id "MSTRG.136486.1"; exon_number "4"; scaffold_877 StringTie exon 266458 266606 1000 + . gene_id "MSTRG.136486"; transcript_id "MSTRG.136486.1"; exon_number "5"; scaffold_877 StringTie exon 267106 267244 1000 + . gene_id "MSTRG.136486"; transcript_id "MSTRG.136486.1"; exon_number "6"; scaffold_877 StringTie exon 267463 267578 1000 + . gene_id "MSTRG.136486"; transcript_id "MSTRG.136486.1"; exon_number "7"; scaffold_877 StringTie exon 313253 313529 1000 + . gene_id "MSTRG.136491"; transcript_id "MSTRG.136491.1"; exon_number "1"; scaffold_877 StringTie exon 313811 313971 1000 + . gene_id "MSTRG.136491"; transcript_id "MSTRG.136491.1"; exon_number "2"; scaffold_877 StringTie exon 314327 314463 1000 + . gene_id "MSTRG.136491"; transcript_id "MSTRG.136491.1"; exon_number "3"; scaffold_877 StringTie exon 315510 317176 1000 + . gene_id "MSTRG.136491"; transcript_id "MSTRG.136491.1"; exon_number "4"; scaffold_8773 StringTie exon 18870 19045 1000 + . gene_id "MSTRG.136509"; transcript_id "MSTRG.136509.1"; exon_number "1"; scaffold_8773 StringTie exon 19611 19782 1000 + . gene_id "MSTRG.136509"; transcript_id "MSTRG.136509.1"; exon_number "2"; scaffold_8773 StringTie exon 21023 21088 1000 + . gene_id "MSTRG.136509"; transcript_id "MSTRG.136509.1"; exon_number "3"; scaffold_8775 StringTie exon 21937 22171 1000 . . gene_id "MSTRG.136516"; transcript_id "MSTRG.136516.1"; exon_number "1"; scaffold_8777 StringTie exon 23956 24279 1000 . . gene_id "MSTRG.136520"; transcript_id "MSTRG.136520.1"; exon_number "1"; scaffold_878 StringTie exon 127977 128037 1000 + . gene_id "MSTRG.136529"; transcript_id "MSTRG.136529.2"; exon_number "1"; scaffold_878 StringTie exon 128454 128509 1000 + . gene_id "MSTRG.136529"; transcript_id "MSTRG.136529.2"; exon_number "2"; scaffold_878 StringTie exon 130785 130874 1000 + . gene_id "MSTRG.136529"; transcript_id "MSTRG.136529.2"; exon_number "3"; scaffold_878 StringTie exon 262475 262724 1000 . . gene_id "MSTRG.136544"; transcript_id "MSTRG.136544.1"; exon_number "1"; scaffold_878 StringTie exon 377374 377804 1000 . . gene_id "MSTRG.136553"; transcript_id "MSTRG.136553.1"; exon_number "1"; scaffold_8782 StringTie exon 12749 13215 1000 . . gene_id "MSTRG.136565"; transcript_id "MSTRG.136565.1"; exon_number "1"; scaffold_8786 StringTie exon 21122 21501 1000 . . gene_id "MSTRG.136572"; transcript_id "MSTRG.136572.1"; exon_number "1"; scaffold_879 StringTie exon 11156 11367 1000 . . gene_id "MSTRG.136579"; transcript_id "MSTRG.136579.1"; exon_number "1"; scaffold_879 StringTie exon 242402 242430 1000 + . gene_id "MSTRG.136586"; transcript_id "MSTRG.136586.1"; exon_number "1"; scaffold_879 StringTie exon 242643 242735 1000 + . gene_id "MSTRG.136586"; transcript_id "MSTRG.136586.1"; exon_number "2"; scaffold_879 StringTie exon 243403 243450 1000 + . gene_id "MSTRG.136586"; transcript_id "MSTRG.136586.1"; exon_number "3"; scaffold_879 StringTie exon 243575 243657 1000 + . gene_id "MSTRG.136586"; transcript_id "MSTRG.136586.1"; exon_number "4"; scaffold_879 StringTie exon 243803 243908 1000 + . gene_id "MSTRG.136586"; transcript_id "MSTRG.136586.1"; exon_number "5"; scaffold_879 StringTie exon 244127 244240 1000 + . gene_id "MSTRG.136586"; transcript_id "MSTRG.136586.1"; exon_number "6"; scaffold_879 StringTie exon 244471 244879 1000 + . gene_id "MSTRG.136586"; transcript_id "MSTRG.136586.1"; exon_number "7"; scaffold_879 StringTie exon 338389 338694 1000 . . gene_id "MSTRG.136592"; transcript_id "MSTRG.136592.1"; exon_number "1"; scaffold_8793 StringTie exon 14233 16252 1000 + . gene_id "MSTRG.136602"; transcript_id "MSTRG.136602.1"; exon_number "1"; scaffold_8793 StringTie exon 16290 18601 1000 + . gene_id "MSTRG.136602"; transcript_id "MSTRG.136602.1"; exon_number "2"; scaffold_8793 StringTie exon 14233 16363 1000 + . gene_id "MSTRG.136602"; transcript_id "MSTRG.136602.2"; exon_number "1"; scaffold_8793 StringTie exon 16438 18601 1000 + . gene_id "MSTRG.136602"; transcript_id "MSTRG.136602.2"; exon_number "2"; scaffold_8793 StringTie exon 14321 16289 1000 + . gene_id "MSTRG.136602"; transcript_id "MSTRG.136602.4"; exon_number "1"; scaffold_8793 StringTie exon 16327 18596 1000 + . gene_id "MSTRG.136602"; transcript_id "MSTRG.136602.4"; exon_number "2"; scaffold_8793 StringTie exon 19247 24540 1000 - . gene_id "MSTRG.136604"; transcript_id "MSTRG.136604.1"; exon_number "1"; scaffold_8793 StringTie exon 25112 26015 1000 - . gene_id "MSTRG.136604"; transcript_id "MSTRG.136604.1"; exon_number "2"; scaffold_8797 StringTie exon 8359 8705 1000 . . gene_id "MSTRG.136616"; transcript_id "MSTRG.136616.1"; exon_number "1"; scaffold_88 StringTie exon 1057377 1057771 1000 . . gene_id "MSTRG.136717"; transcript_id "MSTRG.136717.1"; exon_number "1"; scaffold_88 StringTie exon 1058043 1058360 1000 . . gene_id "MSTRG.136718"; transcript_id "MSTRG.136718.1"; exon_number "1"; scaffold_88 StringTie exon 1120073 1120864 1000 . . gene_id "MSTRG.136723"; transcript_id "MSTRG.136723.1"; exon_number "1"; scaffold_88 StringTie exon 1230217 1230457 1000 . . gene_id "MSTRG.136733"; transcript_id "MSTRG.136733.1"; exon_number "1"; scaffold_88 StringTie exon 1341964 1342400 1000 . . gene_id "MSTRG.136737"; transcript_id "MSTRG.136737.1"; exon_number "1"; scaffold_88 StringTie exon 1601550 1602137 1000 . . gene_id "MSTRG.136754"; transcript_id "MSTRG.136754.1"; exon_number "1"; scaffold_880 StringTie exon 34927 34962 1000 + . gene_id "MSTRG.136779"; transcript_id "MSTRG.136779.1"; exon_number "1"; scaffold_880 StringTie exon 35647 36274 1000 + . gene_id "MSTRG.136779"; transcript_id "MSTRG.136779.1"; exon_number "2"; scaffold_880 StringTie exon 164043 164302 1000 . . gene_id "MSTRG.136797"; transcript_id "MSTRG.136797.1"; exon_number "1"; scaffold_880 StringTie exon 164927 165152 1000 . . gene_id "MSTRG.136798"; transcript_id "MSTRG.136798.1"; exon_number "1"; scaffold_880 StringTie exon 217555 217850 1000 . . gene_id "MSTRG.136809"; transcript_id "MSTRG.136809.1"; exon_number "1"; scaffold_880 StringTie exon 220599 221047 1000 - . gene_id "MSTRG.136813"; transcript_id "MSTRG.136813.1"; exon_number "1"; scaffold_880 StringTie exon 259059 261463 1000 - . gene_id "MSTRG.136818"; transcript_id "MSTRG.136818.1"; exon_number "1"; scaffold_880 StringTie exon 261930 262154 1000 - . gene_id "MSTRG.136818"; transcript_id "MSTRG.136818.1"; exon_number "2"; scaffold_880 StringTie exon 266078 266874 1000 . . gene_id "MSTRG.136820"; transcript_id "MSTRG.136820.1"; exon_number "1"; scaffold_880 StringTie exon 328130 328357 1000 . . gene_id "MSTRG.136826"; transcript_id "MSTRG.136826.1"; exon_number "1"; scaffold_8806 StringTie exon 10165 10735 1000 . . gene_id "MSTRG.136858"; transcript_id "MSTRG.136858.1"; exon_number "1"; scaffold_8819 StringTie exon 5245 5485 1000 . . gene_id "MSTRG.136915"; transcript_id "MSTRG.136915.1"; exon_number "1"; scaffold_883 StringTie exon 189964 190294 1000 . . gene_id "MSTRG.136978"; transcript_id "MSTRG.136978.1"; exon_number "1"; scaffold_883 StringTie exon 263571 263804 1000 . . gene_id "MSTRG.136984"; transcript_id "MSTRG.136984.1"; exon_number "1"; scaffold_8832 StringTie exon 203 420 1000 . . gene_id "MSTRG.136995"; transcript_id "MSTRG.136995.1"; exon_number "1"; scaffold_884 StringTie exon 59437 59931 1000 - . gene_id "MSTRG.137012"; transcript_id "MSTRG.137012.1"; exon_number "1"; scaffold_884 StringTie exon 60057 60113 1000 - . gene_id "MSTRG.137012"; transcript_id "MSTRG.137012.1"; exon_number "2"; scaffold_884 StringTie exon 360446 360766 1000 . . gene_id "MSTRG.137025"; transcript_id "MSTRG.137025.1"; exon_number "1"; scaffold_8840 StringTie exon 5742 6053 1000 . . gene_id "MSTRG.137029"; transcript_id "MSTRG.137029.1"; exon_number "1"; scaffold_8844 StringTie exon 22364 22675 1000 . . gene_id "MSTRG.137041"; transcript_id "MSTRG.137041.1"; exon_number "1"; scaffold_8847 StringTie exon 23846 24134 1000 . . gene_id "MSTRG.137047"; transcript_id "MSTRG.137047.1"; exon_number "1"; scaffold_885 StringTie exon 94627 94847 1000 - . gene_id "MSTRG.137056"; transcript_id "MSTRG.137056.2"; exon_number "1"; scaffold_885 StringTie exon 96118 96217 1000 - . gene_id "MSTRG.137056"; transcript_id "MSTRG.137056.2"; exon_number "2"; scaffold_885 StringTie exon 96593 96745 1000 - . gene_id "MSTRG.137056"; transcript_id "MSTRG.137056.2"; exon_number "3"; scaffold_885 StringTie exon 96908 96969 1000 - . gene_id "MSTRG.137056"; transcript_id "MSTRG.137056.2"; exon_number "4"; scaffold_885 StringTie exon 249694 250358 1000 + . gene_id "MSTRG.137074"; transcript_id "MSTRG.137074.1"; exon_number "1"; scaffold_8854 StringTie exon 6751 7032 1000 . . gene_id "MSTRG.137088"; transcript_id "MSTRG.137088.1"; exon_number "1"; scaffold_8854 StringTie exon 18725 18930 1000 . . gene_id "MSTRG.137093"; transcript_id "MSTRG.137093.1"; exon_number "1"; scaffold_8855 StringTie exon 24645 24879 1000 . . gene_id "MSTRG.137095"; transcript_id "MSTRG.137095.1"; exon_number "1"; scaffold_8856 StringTie exon 16383 17914 1000 . . gene_id "MSTRG.137098"; transcript_id "MSTRG.137098.1"; exon_number "1"; scaffold_886 StringTie exon 144405 144621 1000 . . gene_id "MSTRG.137111"; transcript_id "MSTRG.137111.1"; exon_number "1"; scaffold_886 StringTie exon 315071 315293 1000 . . gene_id "MSTRG.137127"; transcript_id "MSTRG.137127.1"; exon_number "1"; scaffold_887 StringTie exon 194895 195117 1000 . . gene_id "MSTRG.137160"; transcript_id "MSTRG.137160.1"; exon_number "1"; scaffold_887 StringTie exon 293397 293689 1000 . . gene_id "MSTRG.137170"; transcript_id "MSTRG.137170.1"; exon_number "1"; scaffold_8871 StringTie exon 18883 19093 1000 . . gene_id "MSTRG.137186"; transcript_id "MSTRG.137186.1"; exon_number "1"; scaffold_8871 StringTie exon 22001 22239 1000 . . gene_id "MSTRG.137187"; transcript_id "MSTRG.137187.1"; exon_number "1"; scaffold_8878 StringTie exon 25433 25639 1000 . . gene_id "MSTRG.137207"; transcript_id "MSTRG.137207.1"; exon_number "1"; scaffold_888 StringTie exon 76115 76340 1000 . . gene_id "MSTRG.137217"; transcript_id "MSTRG.137217.1"; exon_number "1"; scaffold_888 StringTie exon 76811 77542 1000 . . gene_id "MSTRG.137218"; transcript_id "MSTRG.137218.1"; exon_number "1"; scaffold_888 StringTie exon 222057 222268 1000 . . gene_id "MSTRG.137224"; transcript_id "MSTRG.137224.1"; exon_number "1"; scaffold_888 StringTie exon 246862 247389 1000 . . gene_id "MSTRG.137226"; transcript_id "MSTRG.137226.1"; exon_number "1"; scaffold_888 StringTie exon 387315 387516 1000 . . gene_id "MSTRG.137232"; transcript_id "MSTRG.137232.1"; exon_number "1"; scaffold_8881 StringTie exon 11944 12177 1000 . . gene_id "MSTRG.137240"; transcript_id "MSTRG.137240.1"; exon_number "1"; scaffold_8885 StringTie exon 23723 24109 1000 . . gene_id "MSTRG.137246"; transcript_id "MSTRG.137246.1"; exon_number "1"; scaffold_8886 StringTie exon 17462 17905 1000 . . gene_id "MSTRG.137250"; transcript_id "MSTRG.137250.1"; exon_number "1"; scaffold_8887 StringTie exon 19771 19946 1000 + . gene_id "MSTRG.137253"; transcript_id "MSTRG.137253.1"; exon_number "1"; scaffold_8887 StringTie exon 20431 20504 1000 + . gene_id "MSTRG.137253"; transcript_id "MSTRG.137253.1"; exon_number "2"; scaffold_889 StringTie exon 113879 114084 1000 . . gene_id "MSTRG.137266"; transcript_id "MSTRG.137266.1"; exon_number "1"; scaffold_889 StringTie exon 165790 166047 1000 . . gene_id "MSTRG.137270"; transcript_id "MSTRG.137270.1"; exon_number "1"; scaffold_889 StringTie exon 255952 256178 1000 + . gene_id "MSTRG.137276"; transcript_id "MSTRG.137276.1"; exon_number "1"; scaffold_889 StringTie exon 258467 259335 1000 + . gene_id "MSTRG.137276"; transcript_id "MSTRG.137276.1"; exon_number "2"; scaffold_8893 StringTie exon 4866 5468 1000 . . gene_id "MSTRG.137298"; transcript_id "MSTRG.137298.1"; exon_number "1"; scaffold_8893 StringTie exon 16688 17448 1000 . . gene_id "MSTRG.137301"; transcript_id "MSTRG.137301.1"; exon_number "1"; scaffold_89 StringTie exon 5560 6190 1000 . . gene_id "MSTRG.137319"; transcript_id "MSTRG.137319.1"; exon_number "1"; scaffold_89 StringTie exon 584171 584252 1000 - . gene_id "MSTRG.137373"; transcript_id "MSTRG.137373.1"; exon_number "1"; scaffold_89 StringTie exon 584421 584616 1000 - . gene_id "MSTRG.137373"; transcript_id "MSTRG.137373.1"; exon_number "2"; scaffold_89 StringTie exon 584794 584876 1000 - . gene_id "MSTRG.137373"; transcript_id "MSTRG.137373.1"; exon_number "3"; scaffold_89 StringTie exon 585049 585150 1000 - . gene_id "MSTRG.137373"; transcript_id "MSTRG.137373.1"; exon_number "4"; scaffold_89 StringTie exon 585253 585350 1000 - . gene_id "MSTRG.137373"; transcript_id "MSTRG.137373.1"; exon_number "5"; scaffold_89 StringTie exon 586414 586476 1000 - . gene_id "MSTRG.137374"; transcript_id "MSTRG.137374.1"; exon_number "1"; scaffold_89 StringTie exon 587228 587320 1000 - . gene_id "MSTRG.137374"; transcript_id "MSTRG.137374.1"; exon_number "2"; scaffold_89 StringTie exon 587460 587555 1000 - . gene_id "MSTRG.137374"; transcript_id "MSTRG.137374.1"; exon_number "3"; scaffold_89 StringTie exon 587709 587787 1000 - . gene_id "MSTRG.137374"; transcript_id "MSTRG.137374.1"; exon_number "4"; scaffold_89 StringTie exon 588942 589060 1000 - . gene_id "MSTRG.137374"; transcript_id "MSTRG.137374.1"; exon_number "5"; scaffold_89 StringTie exon 589197 589342 1000 - . gene_id "MSTRG.137374"; transcript_id "MSTRG.137374.1"; exon_number "6"; scaffold_89 StringTie exon 667892 668162 1000 . . gene_id "MSTRG.137387"; transcript_id "MSTRG.137387.1"; exon_number "1"; scaffold_89 StringTie exon 811845 811900 1000 - . gene_id "MSTRG.137395"; transcript_id "MSTRG.137395.1"; exon_number "1"; scaffold_89 StringTie exon 812018 812952 1000 - . gene_id "MSTRG.137395"; transcript_id "MSTRG.137395.1"; exon_number "2"; scaffold_89 StringTie exon 1190355 1190644 1000 . . gene_id "MSTRG.137418"; transcript_id "MSTRG.137418.1"; exon_number "1"; scaffold_89 StringTie exon 1256960 1257330 1000 - . gene_id "MSTRG.137427"; transcript_id "MSTRG.137427.1"; exon_number "1"; scaffold_89 StringTie exon 1262137 1262244 1000 - . gene_id "MSTRG.137429"; transcript_id "MSTRG.137429.1"; exon_number "1"; scaffold_89 StringTie exon 1262353 1262416 1000 - . gene_id "MSTRG.137429"; transcript_id "MSTRG.137429.1"; exon_number "2"; scaffold_89 StringTie exon 1262549 1262691 1000 - . gene_id "MSTRG.137429"; transcript_id "MSTRG.137429.1"; exon_number "3"; scaffold_89 StringTie exon 1435299 1435421 1000 + . gene_id "MSTRG.137440"; transcript_id "MSTRG.137440.1"; exon_number "1"; scaffold_89 StringTie exon 1435595 1435969 1000 + . gene_id "MSTRG.137440"; transcript_id "MSTRG.137440.1"; exon_number "2"; scaffold_89 StringTie exon 1623188 1623426 1000 . . gene_id "MSTRG.137452"; transcript_id "MSTRG.137452.1"; exon_number "1"; scaffold_890 StringTie exon 270079 270379 1000 . . gene_id "MSTRG.137490"; transcript_id "MSTRG.137490.1"; exon_number "1"; scaffold_8905 StringTie exon 8592 8797 1000 . . gene_id "MSTRG.137506"; transcript_id "MSTRG.137506.1"; exon_number "1"; scaffold_8907 StringTie exon 2220 2499 1000 . . gene_id "MSTRG.137509"; transcript_id "MSTRG.137509.1"; exon_number "1"; scaffold_8908 StringTie exon 6181 6463 1000 . . gene_id "MSTRG.137511"; transcript_id "MSTRG.137511.1"; exon_number "1"; scaffold_891 StringTie exon 410962 411235 1000 . . gene_id "MSTRG.137542"; transcript_id "MSTRG.137542.1"; exon_number "1"; scaffold_891 StringTie exon 423278 423563 1000 - . gene_id "MSTRG.137547"; transcript_id "MSTRG.137547.1"; exon_number "1"; scaffold_891 StringTie exon 423975 424086 1000 - . gene_id "MSTRG.137547"; transcript_id "MSTRG.137547.1"; exon_number "2"; scaffold_8916 StringTie exon 11814 11861 1000 + . gene_id "MSTRG.137559"; transcript_id "MSTRG.137559.1"; exon_number "1"; scaffold_8916 StringTie exon 11975 12068 1000 + . gene_id "MSTRG.137559"; transcript_id "MSTRG.137559.1"; exon_number "2"; scaffold_8916 StringTie exon 12198 12271 1000 + . gene_id "MSTRG.137559"; transcript_id "MSTRG.137559.1"; exon_number "3"; scaffold_8918 StringTie exon 6602 6618 1000 - . gene_id "MSTRG.137566"; transcript_id "MSTRG.137566.1"; exon_number "1"; scaffold_8918 StringTie exon 6728 7001 1000 - . gene_id "MSTRG.137566"; transcript_id "MSTRG.137566.1"; exon_number "2"; scaffold_8918 StringTie exon 13881 14082 1000 . . gene_id "MSTRG.137567"; transcript_id "MSTRG.137567.1"; exon_number "1"; scaffold_8919 StringTie exon 2566 2773 1000 . . gene_id "MSTRG.137568"; transcript_id "MSTRG.137568.1"; exon_number "1"; scaffold_892 StringTie exon 96628 97076 1000 . . gene_id "MSTRG.137579"; transcript_id "MSTRG.137579.1"; exon_number "1"; scaffold_8920 StringTie exon 5772 6098 1000 . . gene_id "MSTRG.137603"; transcript_id "MSTRG.137603.1"; exon_number "1"; scaffold_8927 StringTie exon 17494 17747 1000 . . gene_id "MSTRG.137616"; transcript_id "MSTRG.137616.1"; exon_number "1"; scaffold_8933 StringTie exon 5032 5466 1000 . . gene_id "MSTRG.137650"; transcript_id "MSTRG.137650.1"; exon_number "1"; scaffold_894 StringTie exon 319030 319103 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "1"; scaffold_894 StringTie exon 319354 319476 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "2"; scaffold_894 StringTie exon 321350 321498 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "3"; scaffold_894 StringTie exon 384400 384464 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "4"; scaffold_894 StringTie exon 386234 386435 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "5"; scaffold_894 StringTie exon 392697 392837 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "6"; scaffold_894 StringTie exon 393755 393830 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "7"; scaffold_894 StringTie exon 394422 394604 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "8"; scaffold_894 StringTie exon 396154 396324 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "9"; scaffold_894 StringTie exon 398090 398257 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "10"; scaffold_894 StringTie exon 399195 399356 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "11"; scaffold_894 StringTie exon 400121 400405 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "12"; scaffold_894 StringTie exon 402377 403350 1000 + . gene_id "MSTRG.137688"; transcript_id "MSTRG.137688.1"; exon_number "13"; scaffold_895 StringTie exon 176989 177372 1000 . . gene_id "MSTRG.137726"; transcript_id "MSTRG.137726.1"; exon_number "1"; scaffold_895 StringTie exon 375061 375290 1000 . . gene_id "MSTRG.137738"; transcript_id "MSTRG.137738.1"; exon_number "1"; scaffold_895 StringTie exon 421618 421646 1000 + . gene_id "MSTRG.137741"; transcript_id "MSTRG.137741.1"; exon_number "1"; scaffold_895 StringTie exon 422276 422311 1000 + . gene_id "MSTRG.137741"; transcript_id "MSTRG.137741.1"; exon_number "2"; scaffold_895 StringTie exon 422848 423011 1000 + . gene_id "MSTRG.137741"; transcript_id "MSTRG.137741.1"; exon_number "3"; scaffold_895 StringTie exon 423261 423377 1000 + . gene_id "MSTRG.137741"; transcript_id "MSTRG.137741.1"; exon_number "4"; scaffold_895 StringTie exon 429027 429218 1000 + . gene_id "MSTRG.137741"; transcript_id "MSTRG.137741.1"; exon_number "5"; scaffold_895 StringTie exon 429491 429965 1000 + . gene_id "MSTRG.137741"; transcript_id "MSTRG.137741.1"; exon_number "6"; scaffold_896 StringTie exon 27110 27329 1000 . . gene_id "MSTRG.137761"; transcript_id "MSTRG.137761.1"; exon_number "1"; scaffold_8964 StringTie exon 13427 13659 1000 + . gene_id "MSTRG.137792"; transcript_id "MSTRG.137792.1"; exon_number "1"; scaffold_8966 StringTie exon 1944 2167 1000 . . gene_id "MSTRG.137799"; transcript_id "MSTRG.137799.1"; exon_number "1"; scaffold_8969 StringTie exon 1819 1906 1000 + . gene_id "MSTRG.137803"; transcript_id "MSTRG.137803.1"; exon_number "1"; scaffold_8969 StringTie exon 2367 2570 1000 + . gene_id "MSTRG.137803"; transcript_id "MSTRG.137803.1"; exon_number "2"; scaffold_897 StringTie exon 8343 8740 1000 . . gene_id "MSTRG.137806"; transcript_id "MSTRG.137806.1"; exon_number "1"; scaffold_897 StringTie exon 24879 24940 1000 - . gene_id "MSTRG.137809"; transcript_id "MSTRG.137809.1"; exon_number "1"; scaffold_897 StringTie exon 25059 25190 1000 - . gene_id "MSTRG.137809"; transcript_id "MSTRG.137809.1"; exon_number "2"; scaffold_897 StringTie exon 25880 26007 1000 - . gene_id "MSTRG.137809"; transcript_id "MSTRG.137809.1"; exon_number "3"; scaffold_897 StringTie exon 36757 36822 1000 + . gene_id "MSTRG.137812"; transcript_id "MSTRG.137812.1"; exon_number "1"; scaffold_897 StringTie exon 36993 37096 1000 + . gene_id "MSTRG.137812"; transcript_id "MSTRG.137812.1"; exon_number "2"; scaffold_897 StringTie exon 37177 37216 1000 + . gene_id "MSTRG.137812"; transcript_id "MSTRG.137812.1"; exon_number "3"; scaffold_897 StringTie exon 94872 95119 1000 . . gene_id "MSTRG.137822"; transcript_id "MSTRG.137822.1"; exon_number "1"; scaffold_897 StringTie exon 391577 391849 1000 + . gene_id "MSTRG.137847"; transcript_id "MSTRG.137847.1"; exon_number "1"; scaffold_897 StringTie exon 397116 397162 1000 + . gene_id "MSTRG.137847"; transcript_id "MSTRG.137847.1"; exon_number "2"; scaffold_897 StringTie exon 397259 397368 1000 + . gene_id "MSTRG.137847"; transcript_id "MSTRG.137847.1"; exon_number "3"; scaffold_897 StringTie exon 397688 397737 1000 + . gene_id "MSTRG.137847"; transcript_id "MSTRG.137847.1"; exon_number "4"; scaffold_897 StringTie exon 398208 398348 1000 + . gene_id "MSTRG.137847"; transcript_id "MSTRG.137847.1"; exon_number "5"; scaffold_897 StringTie exon 398453 398521 1000 + . gene_id "MSTRG.137847"; transcript_id "MSTRG.137847.1"; exon_number "6"; scaffold_897 StringTie exon 398640 398718 1000 + . gene_id "MSTRG.137847"; transcript_id "MSTRG.137847.1"; exon_number "7"; scaffold_898 StringTie exon 120366 120671 1000 - . gene_id "MSTRG.137872"; transcript_id "MSTRG.137872.2"; exon_number "1"; scaffold_898 StringTie exon 120697 121292 1000 - . gene_id "MSTRG.137872"; transcript_id "MSTRG.137872.2"; exon_number "2"; scaffold_8989 StringTie exon 1526 1825 1000 . . gene_id "MSTRG.137915"; transcript_id "MSTRG.137915.1"; exon_number "1"; scaffold_8989 StringTie exon 11993 12196 1000 . . gene_id "MSTRG.137917"; transcript_id "MSTRG.137917.1"; exon_number "1"; scaffold_899 StringTie exon 184855 184953 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "1"; scaffold_899 StringTie exon 185082 185171 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "2"; scaffold_899 StringTie exon 185407 185529 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "3"; scaffold_899 StringTie exon 185814 185868 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "4"; scaffold_899 StringTie exon 186433 186573 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "5"; scaffold_899 StringTie exon 186746 186859 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "6"; scaffold_899 StringTie exon 186971 187125 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "7"; scaffold_899 StringTie exon 187213 187293 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "8"; scaffold_899 StringTie exon 187389 187484 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "9"; scaffold_899 StringTie exon 188681 188729 1000 - . gene_id "MSTRG.137927"; transcript_id "MSTRG.137927.1"; exon_number "10"; scaffold_899 StringTie exon 367912 368324 1000 . . gene_id "MSTRG.137948"; transcript_id "MSTRG.137948.1"; exon_number "1"; scaffold_899 StringTie exon 377463 377638 1000 + . gene_id "MSTRG.137950"; transcript_id "MSTRG.137950.1"; exon_number "1"; scaffold_899 StringTie exon 380401 380516 1000 + . gene_id "MSTRG.137950"; transcript_id "MSTRG.137950.1"; exon_number "2"; scaffold_899 StringTie exon 380798 380811 1000 + . gene_id "MSTRG.137952"; transcript_id "MSTRG.137952.1"; exon_number "1"; scaffold_899 StringTie exon 381928 382405 1000 + . gene_id "MSTRG.137952"; transcript_id "MSTRG.137952.1"; exon_number "2"; scaffold_899 StringTie exon 383022 383065 1000 + . gene_id "MSTRG.137952"; transcript_id "MSTRG.137952.1"; exon_number "3"; scaffold_899 StringTie exon 420322 420708 1000 . . gene_id "MSTRG.137957"; transcript_id "MSTRG.137957.1"; exon_number "1"; scaffold_9 StringTie exon 17517 17797 1000 . . gene_id "MSTRG.137968"; transcript_id "MSTRG.137968.1"; exon_number "1"; scaffold_9 StringTie exon 38828 39103 1000 . . gene_id "MSTRG.137972"; transcript_id "MSTRG.137972.1"; exon_number "1"; scaffold_9 StringTie exon 114785 115074 1000 . . gene_id "MSTRG.137976"; transcript_id "MSTRG.137976.1"; exon_number "1"; scaffold_9 StringTie exon 170063 170273 1000 . . gene_id "MSTRG.137979"; transcript_id "MSTRG.137979.1"; exon_number "1"; scaffold_9 StringTie exon 203727 204137 1000 . . gene_id "MSTRG.137983"; transcript_id "MSTRG.137983.1"; exon_number "1"; scaffold_9 StringTie exon 804612 804829 1000 . . gene_id "MSTRG.138030"; transcript_id "MSTRG.138030.1"; exon_number "1"; scaffold_9 StringTie exon 981817 982033 1000 . . gene_id "MSTRG.138034"; transcript_id "MSTRG.138034.1"; exon_number "1"; scaffold_9 StringTie exon 1181719 1182960 1000 . . gene_id "MSTRG.138049"; transcript_id "MSTRG.138049.1"; exon_number "1"; scaffold_9 StringTie exon 1241563 1241702 1000 + . gene_id "MSTRG.138051"; transcript_id "MSTRG.138051.1"; exon_number "1"; scaffold_9 StringTie exon 1250968 1251046 1000 + . gene_id "MSTRG.138051"; transcript_id "MSTRG.138051.1"; exon_number "2"; scaffold_9 StringTie exon 1430861 1431098 1000 . . gene_id "MSTRG.138072"; transcript_id "MSTRG.138072.1"; exon_number "1"; scaffold_9 StringTie exon 1737327 1737655 1000 . . gene_id "MSTRG.138097"; transcript_id "MSTRG.138097.1"; exon_number "1"; scaffold_9 StringTie exon 1999315 1999731 1000 . . gene_id "MSTRG.138109"; transcript_id "MSTRG.138109.1"; exon_number "1"; scaffold_9 StringTie exon 2226649 2226978 1000 . . gene_id "MSTRG.138123"; transcript_id "MSTRG.138123.1"; exon_number "1"; scaffold_9 StringTie exon 2325492 2325704 1000 . . gene_id "MSTRG.138132"; transcript_id "MSTRG.138132.1"; exon_number "1"; scaffold_9 StringTie exon 2550588 2550820 1000 . . gene_id "MSTRG.138141"; transcript_id "MSTRG.138141.1"; exon_number "1"; scaffold_9 StringTie exon 2579102 2579580 1000 + . gene_id "MSTRG.138144"; transcript_id "MSTRG.138144.1"; exon_number "1"; scaffold_9 StringTie exon 2961553 2961752 1000 . . gene_id "MSTRG.138164"; transcript_id "MSTRG.138164.1"; exon_number "1"; scaffold_9 StringTie exon 3016236 3016503 1000 . . gene_id "MSTRG.138171"; transcript_id "MSTRG.138171.1"; exon_number "1"; scaffold_9 StringTie exon 3248283 3248808 1000 . . gene_id "MSTRG.138178"; transcript_id "MSTRG.138178.1"; exon_number "1"; scaffold_90 StringTie exon 208128 208671 1000 . . gene_id "MSTRG.138190"; transcript_id "MSTRG.138190.1"; exon_number "1"; scaffold_90 StringTie exon 275575 275659 1000 - . gene_id "MSTRG.138198"; transcript_id "MSTRG.138198.1"; exon_number "1"; scaffold_90 StringTie exon 275840 276182 1000 - . gene_id "MSTRG.138198"; transcript_id "MSTRG.138198.1"; exon_number "2"; scaffold_90 StringTie exon 304064 304091 1000 + . gene_id "MSTRG.138204"; transcript_id "MSTRG.138204.1"; exon_number "1"; scaffold_90 StringTie exon 308995 309176 1000 + . gene_id "MSTRG.138204"; transcript_id "MSTRG.138204.1"; exon_number "2"; scaffold_90 StringTie exon 382593 383009 1000 . . gene_id "MSTRG.138214"; transcript_id "MSTRG.138214.1"; exon_number "1"; scaffold_90 StringTie exon 423006 423480 1000 . . gene_id "MSTRG.138217"; transcript_id "MSTRG.138217.1"; exon_number "1"; scaffold_90 StringTie exon 1258468 1258536 1000 - . gene_id "MSTRG.138278"; transcript_id "MSTRG.138278.1"; exon_number "1"; scaffold_90 StringTie exon 1265838 1265975 1000 - . gene_id "MSTRG.138278"; transcript_id "MSTRG.138278.1"; exon_number "2"; scaffold_90 StringTie exon 1295301 1295337 1000 - . gene_id "MSTRG.138278"; transcript_id "MSTRG.138278.1"; exon_number "3"; scaffold_90 StringTie exon 1310459 1310920 1000 . . gene_id "MSTRG.138280"; transcript_id "MSTRG.138280.1"; exon_number "1"; scaffold_90 StringTie exon 1369324 1369339 1000 - . gene_id "MSTRG.138293"; transcript_id "MSTRG.138293.1"; exon_number "1"; scaffold_90 StringTie exon 1373125 1373303 1000 - . gene_id "MSTRG.138293"; transcript_id "MSTRG.138293.1"; exon_number "2"; scaffold_90 StringTie exon 1373795 1373858 1000 - . gene_id "MSTRG.138293"; transcript_id "MSTRG.138293.1"; exon_number "3"; scaffold_90 StringTie exon 1675991 1677320 1000 . . gene_id "MSTRG.138319"; transcript_id "MSTRG.138319.1"; exon_number "1"; scaffold_90 StringTie exon 1686573 1686665 1000 - . gene_id "MSTRG.138322"; transcript_id "MSTRG.138322.1"; exon_number "1"; scaffold_90 StringTie exon 1686901 1687054 1000 - . gene_id "MSTRG.138322"; transcript_id "MSTRG.138322.1"; exon_number "2"; scaffold_90 StringTie exon 1693836 1694056 1000 - . gene_id "MSTRG.138322"; transcript_id "MSTRG.138322.1"; exon_number "3"; scaffold_90 StringTie exon 1738632 1738852 1000 . . gene_id "MSTRG.138325"; transcript_id "MSTRG.138325.1"; exon_number "1"; scaffold_900 StringTie exon 145189 145438 1000 + . gene_id "MSTRG.138339"; transcript_id "MSTRG.138339.1"; exon_number "1"; scaffold_900 StringTie exon 149005 149292 1000 + . gene_id "MSTRG.138339"; transcript_id "MSTRG.138339.1"; exon_number "2"; scaffold_900 StringTie exon 152794 152988 1000 + . gene_id "MSTRG.138341"; transcript_id "MSTRG.138341.1"; exon_number "1"; scaffold_900 StringTie exon 153127 153227 1000 + . gene_id "MSTRG.138341"; transcript_id "MSTRG.138341.1"; exon_number "2"; scaffold_900 StringTie exon 153404 153680 1000 + . gene_id "MSTRG.138341"; transcript_id "MSTRG.138341.1"; exon_number "3"; scaffold_900 StringTie exon 153920 154003 1000 + . gene_id "MSTRG.138341"; transcript_id "MSTRG.138341.1"; exon_number "4"; scaffold_900 StringTie exon 155418 155536 1000 + . gene_id "MSTRG.138341"; transcript_id "MSTRG.138341.1"; exon_number "5"; scaffold_900 StringTie exon 155779 157439 1000 + . gene_id "MSTRG.138341"; transcript_id "MSTRG.138341.1"; exon_number "6"; scaffold_900 StringTie exon 161672 161923 1000 . . gene_id "MSTRG.138343"; transcript_id "MSTRG.138343.1"; exon_number "1"; scaffold_900 StringTie exon 372977 373234 1000 . . gene_id "MSTRG.138354"; transcript_id "MSTRG.138354.1"; exon_number "1"; scaffold_900 StringTie exon 408274 408350 1000 - . gene_id "MSTRG.138359"; transcript_id "MSTRG.138359.1"; exon_number "1"; scaffold_900 StringTie exon 408575 408725 1000 - . gene_id "MSTRG.138359"; transcript_id "MSTRG.138359.1"; exon_number "2"; scaffold_900 StringTie exon 410062 410075 1000 - . gene_id "MSTRG.138359"; transcript_id "MSTRG.138359.1"; exon_number "3"; scaffold_901 StringTie exon 232647 232975 1000 . . gene_id "MSTRG.138394"; transcript_id "MSTRG.138394.1"; exon_number "1"; scaffold_901 StringTie exon 336674 336683 1000 + . gene_id "MSTRG.138406"; transcript_id "MSTRG.138406.1"; exon_number "1"; scaffold_901 StringTie exon 336841 337003 1000 + . gene_id "MSTRG.138406"; transcript_id "MSTRG.138406.1"; exon_number "2"; scaffold_901 StringTie exon 337313 337584 1000 + . gene_id "MSTRG.138406"; transcript_id "MSTRG.138406.1"; exon_number "3"; scaffold_901 StringTie exon 339281 339325 1000 + . gene_id "MSTRG.138406"; transcript_id "MSTRG.138406.1"; exon_number "4"; scaffold_901 StringTie exon 369461 369611 1000 + . gene_id "MSTRG.138409"; transcript_id "MSTRG.138409.2"; exon_number "1"; scaffold_901 StringTie exon 369738 369915 1000 + . gene_id "MSTRG.138409"; transcript_id "MSTRG.138409.2"; exon_number "2"; scaffold_901 StringTie exon 370750 371006 1000 + . gene_id "MSTRG.138409"; transcript_id "MSTRG.138409.2"; exon_number "3"; scaffold_901 StringTie exon 371292 371389 1000 + . gene_id "MSTRG.138409"; transcript_id "MSTRG.138409.2"; exon_number "4"; scaffold_901 StringTie exon 371499 371629 1000 + . gene_id "MSTRG.138409"; transcript_id "MSTRG.138409.2"; exon_number "5"; scaffold_901 StringTie exon 375993 376196 1000 . . gene_id "MSTRG.138412"; transcript_id "MSTRG.138412.1"; exon_number "1"; scaffold_901 StringTie exon 410646 410934 1000 . . gene_id "MSTRG.138419"; transcript_id "MSTRG.138419.1"; exon_number "1"; scaffold_902 StringTie exon 97985 98245 1000 + . gene_id "MSTRG.138448"; transcript_id "MSTRG.138448.1"; exon_number "1"; scaffold_902 StringTie exon 107721 108119 1000 . . gene_id "MSTRG.138449"; transcript_id "MSTRG.138449.1"; exon_number "1"; scaffold_902 StringTie exon 162303 163086 1000 . . gene_id "MSTRG.138454"; transcript_id "MSTRG.138454.1"; exon_number "1"; scaffold_903 StringTie exon 8373 9639 1000 - . gene_id "MSTRG.138490"; transcript_id "MSTRG.138490.1"; exon_number "1"; scaffold_903 StringTie exon 409109 409321 1000 . . gene_id "MSTRG.138512"; transcript_id "MSTRG.138512.1"; exon_number "1"; scaffold_9032 StringTie exon 12276 12488 1000 . . gene_id "MSTRG.138519"; transcript_id "MSTRG.138519.1"; exon_number "1"; scaffold_9035 StringTie exon 23294 23401 1000 + . gene_id "MSTRG.138528"; transcript_id "MSTRG.138528.1"; exon_number "1"; scaffold_9035 StringTie exon 23707 23860 1000 + . gene_id "MSTRG.138528"; transcript_id "MSTRG.138528.1"; exon_number "2"; scaffold_904 StringTie exon 254111 254453 1000 . . gene_id "MSTRG.138572"; transcript_id "MSTRG.138572.1"; exon_number "1"; scaffold_9041 StringTie exon 1834 2060 1000 . . gene_id "MSTRG.138589"; transcript_id "MSTRG.138589.1"; exon_number "1"; scaffold_9041 StringTie exon 5175 5394 1000 . . gene_id "MSTRG.138590"; transcript_id "MSTRG.138590.1"; exon_number "1"; scaffold_905 StringTie exon 15617 15690 1000 - . gene_id "MSTRG.138610"; transcript_id "MSTRG.138610.1"; exon_number "1"; scaffold_905 StringTie exon 15952 16037 1000 - . gene_id "MSTRG.138610"; transcript_id "MSTRG.138610.1"; exon_number "2"; scaffold_905 StringTie exon 16218 16368 1000 - . gene_id "MSTRG.138610"; transcript_id "MSTRG.138610.1"; exon_number "3"; scaffold_905 StringTie exon 16480 16586 1000 - . gene_id "MSTRG.138610"; transcript_id "MSTRG.138610.1"; exon_number "4"; scaffold_905 StringTie exon 17025 17132 1000 - . gene_id "MSTRG.138610"; transcript_id "MSTRG.138610.1"; exon_number "5"; scaffold_905 StringTie exon 286473 286803 1000 - . gene_id "MSTRG.138626"; transcript_id "MSTRG.138626.1"; exon_number "1"; scaffold_905 StringTie exon 302493 302798 1000 - . gene_id "MSTRG.138626"; transcript_id "MSTRG.138626.1"; exon_number "2"; scaffold_906 StringTie exon 31840 32673 1000 . . gene_id "MSTRG.138660"; transcript_id "MSTRG.138660.1"; exon_number "1"; scaffold_906 StringTie exon 273077 275441 1000 - . gene_id "MSTRG.138677"; transcript_id "MSTRG.138677.1"; exon_number "1"; scaffold_906 StringTie exon 275532 275696 1000 - . gene_id "MSTRG.138677"; transcript_id "MSTRG.138677.1"; exon_number "2"; scaffold_906 StringTie exon 275901 275999 1000 - . gene_id "MSTRG.138677"; transcript_id "MSTRG.138677.1"; exon_number "3"; scaffold_907 StringTie exon 140425 140730 1000 . . gene_id "MSTRG.138731"; transcript_id "MSTRG.138731.1"; exon_number "1"; scaffold_907 StringTie exon 354158 354505 1000 . . gene_id "MSTRG.138745"; transcript_id "MSTRG.138745.1"; exon_number "1"; scaffold_9072 StringTie exon 14470 15658 1000 . . gene_id "MSTRG.138756"; transcript_id "MSTRG.138756.1"; exon_number "1"; scaffold_9074 StringTie exon 19178 19497 1000 . . gene_id "MSTRG.138763"; transcript_id "MSTRG.138763.1"; exon_number "1"; scaffold_908 StringTie exon 82603 83390 1000 . . gene_id "MSTRG.138781"; transcript_id "MSTRG.138781.1"; exon_number "1"; scaffold_908 StringTie exon 121966 122247 1000 . . gene_id "MSTRG.138784"; transcript_id "MSTRG.138784.1"; exon_number "1"; scaffold_908 StringTie exon 284487 284509 1000 - . gene_id "MSTRG.138810"; transcript_id "MSTRG.138810.1"; exon_number "1"; scaffold_908 StringTie exon 285130 285239 1000 - . gene_id "MSTRG.138810"; transcript_id "MSTRG.138810.1"; exon_number "2"; scaffold_908 StringTie exon 285391 285493 1000 - . gene_id "MSTRG.138810"; transcript_id "MSTRG.138810.1"; exon_number "3"; scaffold_908 StringTie exon 285662 285747 1000 - . gene_id "MSTRG.138810"; transcript_id "MSTRG.138810.1"; exon_number "4"; scaffold_908 StringTie exon 286298 286406 1000 - . gene_id "MSTRG.138810"; transcript_id "MSTRG.138810.1"; exon_number "5"; scaffold_908 StringTie exon 286706 286835 1000 - . gene_id "MSTRG.138810"; transcript_id "MSTRG.138810.1"; exon_number "6"; scaffold_908 StringTie exon 288784 289222 1000 - . gene_id "MSTRG.138810"; transcript_id "MSTRG.138810.1"; exon_number "7"; scaffold_9089 StringTie exon 24435 24770 1000 . . gene_id "MSTRG.138833"; transcript_id "MSTRG.138833.1"; exon_number "1"; scaffold_909 StringTie exon 74915 75131 1000 . . gene_id "MSTRG.138839"; transcript_id "MSTRG.138839.1"; exon_number "1"; scaffold_909 StringTie exon 151794 151997 1000 . . gene_id "MSTRG.138851"; transcript_id "MSTRG.138851.1"; exon_number "1"; scaffold_909 StringTie exon 156837 157122 1000 . . gene_id "MSTRG.138852"; transcript_id "MSTRG.138852.1"; exon_number "1"; scaffold_9093 StringTie exon 349 810 1000 . . gene_id "MSTRG.138871"; transcript_id "MSTRG.138871.1"; exon_number "1"; scaffold_91 StringTie exon 421259 421558 1000 . . gene_id "MSTRG.138907"; transcript_id "MSTRG.138907.1"; exon_number "1"; scaffold_91 StringTie exon 743194 743423 1000 . . gene_id "MSTRG.138924"; transcript_id "MSTRG.138924.1"; exon_number "1"; scaffold_91 StringTie exon 787842 787868 1000 - . gene_id "MSTRG.138928"; transcript_id "MSTRG.138928.1"; exon_number "1"; scaffold_91 StringTie exon 793606 793692 1000 - . gene_id "MSTRG.138928"; transcript_id "MSTRG.138928.1"; exon_number "2"; scaffold_91 StringTie exon 796725 796833 1000 - . gene_id "MSTRG.138928"; transcript_id "MSTRG.138928.1"; exon_number "3"; scaffold_91 StringTie exon 798430 798491 1000 - . gene_id "MSTRG.138928"; transcript_id "MSTRG.138928.1"; exon_number "4"; scaffold_91 StringTie exon 1409394 1409786 1000 . . gene_id "MSTRG.138961"; transcript_id "MSTRG.138961.1"; exon_number "1"; scaffold_91 StringTie exon 1618744 1619781 1000 . . gene_id "MSTRG.138973"; transcript_id "MSTRG.138973.1"; exon_number "1"; scaffold_91 StringTie exon 1628267 1628601 1000 - . gene_id "MSTRG.138975"; transcript_id "MSTRG.138975.1"; exon_number "1"; scaffold_91 StringTie exon 1671680 1672021 1000 . . gene_id "MSTRG.138978"; transcript_id "MSTRG.138978.1"; exon_number "1"; scaffold_910 StringTie exon 105487 105841 1000 . . gene_id "MSTRG.138992"; transcript_id "MSTRG.138992.1"; exon_number "1"; scaffold_9102 StringTie exon 468 686 1000 . . gene_id "MSTRG.139018"; transcript_id "MSTRG.139018.1"; exon_number "1"; scaffold_911 StringTie exon 365626 365962 1000 . . gene_id "MSTRG.139045"; transcript_id "MSTRG.139045.1"; exon_number "1"; scaffold_911 StringTie exon 419626 419869 1000 . . gene_id "MSTRG.139049"; transcript_id "MSTRG.139049.1"; exon_number "1"; scaffold_9111 StringTie exon 609 983 1000 . . gene_id "MSTRG.139051"; transcript_id "MSTRG.139051.1"; exon_number "1"; scaffold_912 StringTie exon 260652 260862 1000 . . gene_id "MSTRG.139085"; transcript_id "MSTRG.139085.1"; exon_number "1"; scaffold_912 StringTie exon 415912 416169 1000 . . gene_id "MSTRG.139112"; transcript_id "MSTRG.139112.1"; exon_number "1"; scaffold_9125 StringTie exon 4617 4870 1000 . . gene_id "MSTRG.139123"; transcript_id "MSTRG.139123.1"; exon_number "1"; scaffold_9129 StringTie exon 303 763 1000 . . gene_id "MSTRG.139131"; transcript_id "MSTRG.139131.1"; exon_number "1"; scaffold_913 StringTie exon 29295 29588 1000 . . gene_id "MSTRG.139142"; transcript_id "MSTRG.139142.1"; exon_number "1"; scaffold_9135 StringTie exon 14979 15179 1000 . . gene_id "MSTRG.139178"; transcript_id "MSTRG.139178.1"; exon_number "1"; scaffold_914 StringTie exon 102134 102427 1000 . . gene_id "MSTRG.139180"; transcript_id "MSTRG.139180.1"; exon_number "1"; scaffold_9141 StringTie exon 11319 11539 1000 . . gene_id "MSTRG.139212"; transcript_id "MSTRG.139212.1"; exon_number "1"; scaffold_915 StringTie exon 125394 125744 1000 . . gene_id "MSTRG.139236"; transcript_id "MSTRG.139236.1"; exon_number "1"; scaffold_9169 StringTie exon 8990 9341 1000 . . gene_id "MSTRG.139333"; transcript_id "MSTRG.139333.1"; exon_number "1"; scaffold_917 StringTie exon 231006 231520 1000 . . gene_id "MSTRG.139350"; transcript_id "MSTRG.139350.1"; exon_number "1"; scaffold_917 StringTie exon 248861 249028 1000 - . gene_id "MSTRG.139356"; transcript_id "MSTRG.139356.1"; exon_number "1"; scaffold_917 StringTie exon 250116 250224 1000 - . gene_id "MSTRG.139356"; transcript_id "MSTRG.139356.1"; exon_number "2"; scaffold_917 StringTie exon 282530 282821 1000 . . gene_id "MSTRG.139358"; transcript_id "MSTRG.139358.1"; exon_number "1"; scaffold_918 StringTie exon 811 1027 1000 . . gene_id "MSTRG.139385"; transcript_id "MSTRG.139385.1"; exon_number "1"; scaffold_918 StringTie exon 8075 8358 1000 . . gene_id "MSTRG.139389"; transcript_id "MSTRG.139389.1"; exon_number "1"; scaffold_918 StringTie exon 33394 33512 1000 + . gene_id "MSTRG.139394"; transcript_id "MSTRG.139394.1"; exon_number "1"; scaffold_918 StringTie exon 41056 41185 1000 + . gene_id "MSTRG.139394"; transcript_id "MSTRG.139394.1"; exon_number "2"; scaffold_918 StringTie exon 42222 42804 1000 + . gene_id "MSTRG.139394"; transcript_id "MSTRG.139394.1"; exon_number "3"; scaffold_918 StringTie exon 43192 43258 1000 + . gene_id "MSTRG.139394"; transcript_id "MSTRG.139394.1"; exon_number "4"; scaffold_918 StringTie exon 43425 43596 1000 + . gene_id "MSTRG.139394"; transcript_id "MSTRG.139394.1"; exon_number "5"; scaffold_918 StringTie exon 43762 43806 1000 + . gene_id "MSTRG.139394"; transcript_id "MSTRG.139394.1"; exon_number "6"; scaffold_918 StringTie exon 43903 44460 1000 + . gene_id "MSTRG.139394"; transcript_id "MSTRG.139394.1"; exon_number "7"; scaffold_918 StringTie exon 100907 101195 1000 . . gene_id "MSTRG.139403"; transcript_id "MSTRG.139403.1"; exon_number "1"; scaffold_918 StringTie exon 119612 119735 1000 - . gene_id "MSTRG.139408"; transcript_id "MSTRG.139408.1"; exon_number "1"; scaffold_918 StringTie exon 120025 120236 1000 - . gene_id "MSTRG.139408"; transcript_id "MSTRG.139408.1"; exon_number "2"; scaffold_918 StringTie exon 130161 130378 1000 + . gene_id "MSTRG.139410"; transcript_id "MSTRG.139410.1"; exon_number "1"; scaffold_918 StringTie exon 138003 138148 1000 + . gene_id "MSTRG.139410"; transcript_id "MSTRG.139410.1"; exon_number "2"; scaffold_918 StringTie exon 138247 138422 1000 + . gene_id "MSTRG.139410"; transcript_id "MSTRG.139410.1"; exon_number "3"; scaffold_918 StringTie exon 139963 140048 1000 + . gene_id "MSTRG.139410"; transcript_id "MSTRG.139410.1"; exon_number "4"; scaffold_918 StringTie exon 140135 140731 1000 + . gene_id "MSTRG.139410"; transcript_id "MSTRG.139410.1"; exon_number "5"; scaffold_918 StringTie exon 249103 249315 1000 . . gene_id "MSTRG.139419"; transcript_id "MSTRG.139419.1"; exon_number "1"; scaffold_918 StringTie exon 296606 296839 1000 . . gene_id "MSTRG.139421"; transcript_id "MSTRG.139421.1"; exon_number "1"; scaffold_918 StringTie exon 407658 408423 1000 . . gene_id "MSTRG.139433"; transcript_id "MSTRG.139433.1"; exon_number "1"; scaffold_9182 StringTie exon 18181 18387 1000 . . gene_id "MSTRG.139440"; transcript_id "MSTRG.139440.1"; exon_number "1"; scaffold_919 StringTie exon 79546 79762 1000 . . gene_id "MSTRG.139461"; transcript_id "MSTRG.139461.1"; exon_number "1"; scaffold_92 StringTie exon 381790 382012 1000 . . gene_id "MSTRG.139523"; transcript_id "MSTRG.139523.1"; exon_number "1"; scaffold_92 StringTie exon 391123 391402 1000 . . gene_id "MSTRG.139524"; transcript_id "MSTRG.139524.1"; exon_number "1"; scaffold_92 StringTie exon 1198367 1198656 1000 . . gene_id "MSTRG.139578"; transcript_id "MSTRG.139578.1"; exon_number "1"; scaffold_92 StringTie exon 1239930 1240133 1000 . . gene_id "MSTRG.139580"; transcript_id "MSTRG.139580.1"; exon_number "1"; scaffold_92 StringTie exon 1580109 1580404 1000 . . gene_id "MSTRG.139603"; transcript_id "MSTRG.139603.1"; exon_number "1"; scaffold_920 StringTie exon 4361 5421 1000 - . gene_id "MSTRG.139614"; transcript_id "MSTRG.139614.1"; exon_number "1"; scaffold_9208 StringTie exon 3377 3618 1000 . . gene_id "MSTRG.139676"; transcript_id "MSTRG.139676.1"; exon_number "1"; scaffold_921 StringTie exon 84405 84626 1000 - . gene_id "MSTRG.139684"; transcript_id "MSTRG.139684.1"; exon_number "1"; scaffold_921 StringTie exon 155766 156024 1000 . . gene_id "MSTRG.139690"; transcript_id "MSTRG.139690.1"; exon_number "1"; scaffold_922 StringTie exon 117521 117745 1000 . . gene_id "MSTRG.139726"; transcript_id "MSTRG.139726.1"; exon_number "1"; scaffold_922 StringTie exon 245662 246503 1000 - . gene_id "MSTRG.139731"; transcript_id "MSTRG.139731.1"; exon_number "1"; scaffold_922 StringTie exon 246628 246866 1000 - . gene_id "MSTRG.139731"; transcript_id "MSTRG.139731.1"; exon_number "2"; scaffold_922 StringTie exon 246965 247034 1000 - . gene_id "MSTRG.139731"; transcript_id "MSTRG.139731.1"; exon_number "3"; scaffold_9224 StringTie exon 23034 23462 1000 . . gene_id "MSTRG.139755"; transcript_id "MSTRG.139755.1"; exon_number "1"; scaffold_9225 StringTie exon 6185 6411 1000 . . gene_id "MSTRG.139756"; transcript_id "MSTRG.139756.1"; exon_number "1"; scaffold_9226 StringTie exon 10250 10497 1000 . . gene_id "MSTRG.139758"; transcript_id "MSTRG.139758.1"; exon_number "1"; scaffold_923 StringTie exon 140394 140850 1000 . . gene_id "MSTRG.139771"; transcript_id "MSTRG.139771.1"; exon_number "1"; scaffold_923 StringTie exon 271573 271931 1000 . . gene_id "MSTRG.139775"; transcript_id "MSTRG.139775.1"; exon_number "1"; scaffold_9236 StringTie exon 15780 16008 1000 . . gene_id "MSTRG.139800"; transcript_id "MSTRG.139800.1"; exon_number "1"; scaffold_9237 StringTie exon 9320 9936 1000 . . gene_id "MSTRG.139809"; transcript_id "MSTRG.139809.1"; exon_number "1"; scaffold_924 StringTie exon 108839 108932 1000 - . gene_id "MSTRG.139821"; transcript_id "MSTRG.139821.1"; exon_number "1"; scaffold_924 StringTie exon 109151 109328 1000 - . gene_id "MSTRG.139821"; transcript_id "MSTRG.139821.1"; exon_number "2"; scaffold_924 StringTie exon 109575 109841 1000 - . gene_id "MSTRG.139821"; transcript_id "MSTRG.139821.1"; exon_number "3"; scaffold_924 StringTie exon 111270 111451 1000 - . gene_id "MSTRG.139821"; transcript_id "MSTRG.139821.1"; exon_number "4"; scaffold_924 StringTie exon 111702 111805 1000 - . gene_id "MSTRG.139821"; transcript_id "MSTRG.139821.1"; exon_number "5"; scaffold_924 StringTie exon 111897 111959 1000 - . gene_id "MSTRG.139821"; transcript_id "MSTRG.139821.1"; exon_number "6"; scaffold_925 StringTie exon 175304 175592 1000 . . gene_id "MSTRG.139864"; transcript_id "MSTRG.139864.1"; exon_number "1"; scaffold_9251 StringTie exon 11909 12233 1000 . . gene_id "MSTRG.139871"; transcript_id "MSTRG.139871.1"; exon_number "1"; scaffold_9258 StringTie exon 15664 15895 1000 . . gene_id "MSTRG.139890"; transcript_id "MSTRG.139890.1"; exon_number "1"; scaffold_926 StringTie exon 348615 349110 1000 . . gene_id "MSTRG.139904"; transcript_id "MSTRG.139904.1"; exon_number "1"; scaffold_926 StringTie exon 413625 413882 1000 . . gene_id "MSTRG.139910"; transcript_id "MSTRG.139910.1"; exon_number "1"; scaffold_9264 StringTie exon 10413 10618 1000 . . gene_id "MSTRG.139914"; transcript_id "MSTRG.139914.1"; exon_number "1"; scaffold_927 StringTie exon 88975 89401 1000 . . gene_id "MSTRG.139936"; transcript_id "MSTRG.139936.1"; exon_number "1"; scaffold_9271 StringTie exon 7816 8029 1000 + . gene_id "MSTRG.139951"; transcript_id "MSTRG.139951.1"; exon_number "1"; scaffold_9271 StringTie exon 8562 8819 1000 + . gene_id "MSTRG.139951"; transcript_id "MSTRG.139951.1"; exon_number "2"; scaffold_9271 StringTie exon 9048 9130 1000 + . gene_id "MSTRG.139951"; transcript_id "MSTRG.139951.1"; exon_number "3"; scaffold_9271 StringTie exon 9303 9394 1000 + . gene_id "MSTRG.139951"; transcript_id "MSTRG.139951.1"; exon_number "4"; scaffold_9275 StringTie exon 78 530 1000 . . gene_id "MSTRG.139960"; transcript_id "MSTRG.139960.1"; exon_number "1"; scaffold_928 StringTie exon 64342 64600 1000 . . gene_id "MSTRG.139981"; transcript_id "MSTRG.139981.1"; exon_number "1"; scaffold_928 StringTie exon 118417 118736 1000 + . gene_id "MSTRG.139991"; transcript_id "MSTRG.139991.1"; exon_number "1"; scaffold_928 StringTie exon 119273 119439 1000 + . gene_id "MSTRG.139991"; transcript_id "MSTRG.139991.1"; exon_number "2"; scaffold_928 StringTie exon 122748 122841 1000 + . gene_id "MSTRG.139991"; transcript_id "MSTRG.139991.1"; exon_number "3"; scaffold_928 StringTie exon 130723 130856 1000 + . gene_id "MSTRG.139991"; transcript_id "MSTRG.139991.1"; exon_number "4"; scaffold_928 StringTie exon 130957 131120 1000 + . gene_id "MSTRG.139991"; transcript_id "MSTRG.139991.1"; exon_number "5"; scaffold_928 StringTie exon 131384 133499 1000 + . gene_id "MSTRG.139991"; transcript_id "MSTRG.139991.1"; exon_number "6"; scaffold_928 StringTie exon 147781 148010 1000 . . gene_id "MSTRG.139997"; transcript_id "MSTRG.139997.1"; exon_number "1"; scaffold_928 StringTie exon 245681 245939 1000 . . gene_id "MSTRG.140009"; transcript_id "MSTRG.140009.1"; exon_number "1"; scaffold_928 StringTie exon 280118 280223 1000 + . gene_id "MSTRG.140017"; transcript_id "MSTRG.140017.1"; exon_number "1"; scaffold_928 StringTie exon 280334 280469 1000 + . gene_id "MSTRG.140017"; transcript_id "MSTRG.140017.1"; exon_number "2"; scaffold_928 StringTie exon 280634 280720 1000 + . gene_id "MSTRG.140017"; transcript_id "MSTRG.140017.1"; exon_number "3"; scaffold_928 StringTie exon 280853 281352 1000 + . gene_id "MSTRG.140017"; transcript_id "MSTRG.140017.1"; exon_number "4"; scaffold_929 StringTie exon 28862 28891 1000 + . gene_id "MSTRG.140050"; transcript_id "MSTRG.140050.1"; exon_number "1"; scaffold_929 StringTie exon 29053 29254 1000 + . gene_id "MSTRG.140050"; transcript_id "MSTRG.140050.1"; exon_number "2"; scaffold_929 StringTie exon 29884 29911 1000 + . gene_id "MSTRG.140050"; transcript_id "MSTRG.140050.1"; exon_number "3"; scaffold_929 StringTie exon 160686 161121 1000 . . gene_id "MSTRG.140069"; transcript_id "MSTRG.140069.1"; exon_number "1"; scaffold_929 StringTie exon 342313 342586 1000 . . gene_id "MSTRG.140084"; transcript_id "MSTRG.140084.1"; exon_number "1"; scaffold_929 StringTie exon 347432 347644 1000 . . gene_id "MSTRG.140085"; transcript_id "MSTRG.140085.1"; exon_number "1"; scaffold_9290 StringTie exon 11370 11430 1000 + . gene_id "MSTRG.140088"; transcript_id "MSTRG.140088.1"; exon_number "1"; scaffold_9290 StringTie exon 12726 12870 1000 + . gene_id "MSTRG.140088"; transcript_id "MSTRG.140088.1"; exon_number "2"; scaffold_9290 StringTie exon 13132 13216 1000 + . gene_id "MSTRG.140088"; transcript_id "MSTRG.140088.1"; exon_number "3"; scaffold_93 StringTie exon 35082 35376 1000 . . gene_id "MSTRG.140112"; transcript_id "MSTRG.140112.1"; exon_number "1"; scaffold_93 StringTie exon 551856 552138 1000 . . gene_id "MSTRG.140132"; transcript_id "MSTRG.140132.1"; exon_number "1"; scaffold_93 StringTie exon 583963 584361 1000 . . gene_id "MSTRG.140134"; transcript_id "MSTRG.140134.1"; exon_number "1"; scaffold_93 StringTie exon 1510126 1510500 1000 . . gene_id "MSTRG.140204"; transcript_id "MSTRG.140204.1"; exon_number "1"; scaffold_930 StringTie exon 118929 119180 1000 . . gene_id "MSTRG.140233"; transcript_id "MSTRG.140233.1"; exon_number "1"; scaffold_930 StringTie exon 139555 139794 1000 . . gene_id "MSTRG.140236"; transcript_id "MSTRG.140236.1"; exon_number "1"; scaffold_930 StringTie exon 150772 152188 1000 . . gene_id "MSTRG.140238"; transcript_id "MSTRG.140238.1"; exon_number "1"; scaffold_9306 StringTie exon 13011 13090 1000 - . gene_id "MSTRG.140270"; transcript_id "MSTRG.140270.1"; exon_number "1"; scaffold_9306 StringTie exon 13370 13600 1000 - . gene_id "MSTRG.140270"; transcript_id "MSTRG.140270.1"; exon_number "2"; scaffold_9306 StringTie exon 14507 14645 1000 - . gene_id "MSTRG.140270"; transcript_id "MSTRG.140270.1"; exon_number "3"; scaffold_9307 StringTie exon 21626 21920 1000 . . gene_id "MSTRG.140272"; transcript_id "MSTRG.140272.1"; exon_number "1"; scaffold_9309 StringTie exon 4424 4471 1000 - . gene_id "MSTRG.140276"; transcript_id "MSTRG.140276.2"; exon_number "1"; scaffold_9309 StringTie exon 4841 4918 1000 - . gene_id "MSTRG.140276"; transcript_id "MSTRG.140276.2"; exon_number "2"; scaffold_9309 StringTie exon 5153 5184 1000 - . gene_id "MSTRG.140276"; transcript_id "MSTRG.140276.2"; exon_number "3"; scaffold_9309 StringTie exon 5335 5435 1000 - . gene_id "MSTRG.140276"; transcript_id "MSTRG.140276.2"; exon_number "4"; scaffold_9309 StringTie exon 5518 5574 1000 - . gene_id "MSTRG.140276"; transcript_id "MSTRG.140276.2"; exon_number "5"; scaffold_9309 StringTie exon 6262 6345 1000 - . gene_id "MSTRG.140276"; transcript_id "MSTRG.140276.2"; exon_number "6"; scaffold_9309 StringTie exon 6433 6443 1000 - . gene_id "MSTRG.140276"; transcript_id "MSTRG.140276.2"; exon_number "7"; scaffold_931 StringTie exon 255715 255744 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "1"; scaffold_931 StringTie exon 256127 256169 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "2"; scaffold_931 StringTie exon 258858 259102 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "3"; scaffold_931 StringTie exon 260199 260303 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "4"; scaffold_931 StringTie exon 260805 260883 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "5"; scaffold_931 StringTie exon 260981 261038 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "6"; scaffold_931 StringTie exon 261215 261370 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "7"; scaffold_931 StringTie exon 262321 262414 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "8"; scaffold_931 StringTie exon 262575 263355 1000 + . gene_id "MSTRG.140299"; transcript_id "MSTRG.140299.1"; exon_number "9"; scaffold_9312 StringTie exon 9356 9568 1000 . . gene_id "MSTRG.140338"; transcript_id "MSTRG.140338.1"; exon_number "1"; scaffold_9318 StringTie exon 2252 2541 1000 . . gene_id "MSTRG.140350"; transcript_id "MSTRG.140350.1"; exon_number "1"; scaffold_932 StringTie exon 98664 98676 1000 - . gene_id "MSTRG.140365"; transcript_id "MSTRG.140365.1"; exon_number "1"; scaffold_932 StringTie exon 98870 98992 1000 - . gene_id "MSTRG.140365"; transcript_id "MSTRG.140365.1"; exon_number "2"; scaffold_932 StringTie exon 99192 99280 1000 - . gene_id "MSTRG.140365"; transcript_id "MSTRG.140365.1"; exon_number "3"; scaffold_932 StringTie exon 99392 99438 1000 - . gene_id "MSTRG.140365"; transcript_id "MSTRG.140365.1"; exon_number "4"; scaffold_9322 StringTie exon 5528 5799 1000 . . gene_id "MSTRG.140392"; transcript_id "MSTRG.140392.1"; exon_number "1"; scaffold_9323 StringTie exon 23960 24321 1000 . . gene_id "MSTRG.140395"; transcript_id "MSTRG.140395.1"; exon_number "1"; scaffold_9325 StringTie exon 18157 18387 1000 . . gene_id "MSTRG.140399"; transcript_id "MSTRG.140399.1"; exon_number "1"; scaffold_933 StringTie exon 87784 88019 1000 . . gene_id "MSTRG.140412"; transcript_id "MSTRG.140412.1"; exon_number "1"; scaffold_933 StringTie exon 351994 352193 1000 . . gene_id "MSTRG.140433"; transcript_id "MSTRG.140433.1"; exon_number "1"; scaffold_9333 StringTie exon 14231 14470 1000 . . gene_id "MSTRG.140446"; transcript_id "MSTRG.140446.1"; exon_number "1"; scaffold_9334 StringTie exon 7132 7217 1000 + . gene_id "MSTRG.140447"; transcript_id "MSTRG.140447.1"; exon_number "1"; scaffold_9334 StringTie exon 7433 7606 1000 + . gene_id "MSTRG.140447"; transcript_id "MSTRG.140447.1"; exon_number "2"; scaffold_9334 StringTie exon 9607 9790 1000 + . gene_id "MSTRG.140447"; transcript_id "MSTRG.140447.1"; exon_number "3"; scaffold_9334 StringTie exon 10578 10678 1000 + . gene_id "MSTRG.140447"; transcript_id "MSTRG.140447.1"; exon_number "4"; scaffold_9334 StringTie exon 10916 11107 1000 + . gene_id "MSTRG.140447"; transcript_id "MSTRG.140447.1"; exon_number "5"; scaffold_934 StringTie exon 280282 280509 1000 . . gene_id "MSTRG.140478"; transcript_id "MSTRG.140478.1"; exon_number "1"; scaffold_9349 StringTie exon 9243 9452 1000 . . gene_id "MSTRG.140501"; transcript_id "MSTRG.140501.1"; exon_number "1"; scaffold_936 StringTie exon 186963 187513 1000 . . gene_id "MSTRG.140549"; transcript_id "MSTRG.140549.1"; exon_number "1"; scaffold_936 StringTie exon 317607 317878 1000 + . gene_id "MSTRG.140560"; transcript_id "MSTRG.140560.1"; exon_number "1"; scaffold_936 StringTie exon 321665 321835 1000 + . gene_id "MSTRG.140560"; transcript_id "MSTRG.140560.1"; exon_number "2"; scaffold_936 StringTie exon 349195 349213 1000 + . gene_id "MSTRG.140565"; transcript_id "MSTRG.140565.2"; exon_number "1"; scaffold_936 StringTie exon 349327 349614 1000 + . gene_id "MSTRG.140565"; transcript_id "MSTRG.140565.2"; exon_number "2"; scaffold_936 StringTie exon 351002 351050 1000 + . gene_id "MSTRG.140565"; transcript_id "MSTRG.140565.2"; exon_number "3"; scaffold_936 StringTie exon 351354 351455 1000 + . gene_id "MSTRG.140565"; transcript_id "MSTRG.140565.2"; exon_number "4"; scaffold_936 StringTie exon 404339 404349 1000 + . gene_id "MSTRG.140565"; transcript_id "MSTRG.140565.2"; exon_number "5"; scaffold_936 StringTie exon 358368 358462 1000 + . gene_id "MSTRG.140566"; transcript_id "MSTRG.140566.1"; exon_number "1"; scaffold_936 StringTie exon 359060 359204 1000 + . gene_id "MSTRG.140566"; transcript_id "MSTRG.140566.1"; exon_number "2"; scaffold_936 StringTie exon 359534 359677 1000 + . gene_id "MSTRG.140566"; transcript_id "MSTRG.140566.1"; exon_number "3"; scaffold_936 StringTie exon 359803 359886 1000 + . gene_id "MSTRG.140566"; transcript_id "MSTRG.140566.1"; exon_number "4"; scaffold_936 StringTie exon 360115 360261 1000 + . gene_id "MSTRG.140566"; transcript_id "MSTRG.140566.1"; exon_number "5"; scaffold_937 StringTie exon 166222 166386 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "1"; scaffold_937 StringTie exon 167334 167549 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "2"; scaffold_937 StringTie exon 167814 168035 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "3"; scaffold_937 StringTie exon 168155 168241 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "4"; scaffold_937 StringTie exon 169524 169673 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "5"; scaffold_937 StringTie exon 170015 170176 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "6"; scaffold_937 StringTie exon 172825 172979 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "7"; scaffold_937 StringTie exon 173365 173549 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "8"; scaffold_937 StringTie exon 179069 179140 1000 - . gene_id "MSTRG.140597"; transcript_id "MSTRG.140597.1"; exon_number "9"; scaffold_938 StringTie exon 40276 40340 1000 - . gene_id "MSTRG.140624"; transcript_id "MSTRG.140624.1"; exon_number "1"; scaffold_938 StringTie exon 41528 41786 1000 - . gene_id "MSTRG.140624"; transcript_id "MSTRG.140624.1"; exon_number "2"; scaffold_938 StringTie exon 42072 42116 1000 - . gene_id "MSTRG.140625"; transcript_id "MSTRG.140625.1"; exon_number "1"; scaffold_938 StringTie exon 45128 45271 1000 - . gene_id "MSTRG.140625"; transcript_id "MSTRG.140625.1"; exon_number "2"; scaffold_938 StringTie exon 45416 45502 1000 - . gene_id "MSTRG.140625"; transcript_id "MSTRG.140625.1"; exon_number "3"; scaffold_938 StringTie exon 45817 45932 1000 - . gene_id "MSTRG.140625"; transcript_id "MSTRG.140625.1"; exon_number "4"; scaffold_938 StringTie exon 47537 47571 1000 - . gene_id "MSTRG.140625"; transcript_id "MSTRG.140625.1"; exon_number "5"; scaffold_938 StringTie exon 355351 355620 1000 . . gene_id "MSTRG.140637"; transcript_id "MSTRG.140637.1"; exon_number "1"; scaffold_9389 StringTie exon 16343 16565 1000 . . gene_id "MSTRG.140669"; transcript_id "MSTRG.140669.1"; exon_number "1"; scaffold_939 StringTie exon 65400 65789 1000 . . gene_id "MSTRG.140671"; transcript_id "MSTRG.140671.1"; exon_number "1"; scaffold_939 StringTie exon 237367 237462 1000 - . gene_id "MSTRG.140688"; transcript_id "MSTRG.140688.1"; exon_number "1"; scaffold_939 StringTie exon 244519 244617 1000 - . gene_id "MSTRG.140688"; transcript_id "MSTRG.140688.1"; exon_number "2"; scaffold_939 StringTie exon 299431 299576 1000 - . gene_id "MSTRG.140688"; transcript_id "MSTRG.140688.1"; exon_number "3"; scaffold_9391 StringTie exon 10267 10518 1000 . . gene_id "MSTRG.140707"; transcript_id "MSTRG.140707.1"; exon_number "1"; scaffold_9392 StringTie exon 1508 1774 1000 . . gene_id "MSTRG.140710"; transcript_id "MSTRG.140710.1"; exon_number "1"; scaffold_9399 StringTie exon 16496 16781 1000 + . gene_id "MSTRG.140720"; transcript_id "MSTRG.140720.1"; exon_number "1"; scaffold_9399 StringTie exon 18573 18728 1000 + . gene_id "MSTRG.140720"; transcript_id "MSTRG.140720.1"; exon_number "2"; scaffold_94 StringTie exon 133443 133650 1000 . . gene_id "MSTRG.140723"; transcript_id "MSTRG.140723.1"; exon_number "1"; scaffold_94 StringTie exon 556909 557116 1000 . . gene_id "MSTRG.140745"; transcript_id "MSTRG.140745.1"; exon_number "1"; scaffold_94 StringTie exon 669689 669699 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "1"; scaffold_94 StringTie exon 670202 670267 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "2"; scaffold_94 StringTie exon 670807 670914 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "3"; scaffold_94 StringTie exon 671635 671781 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "4"; scaffold_94 StringTie exon 673076 673218 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "5"; scaffold_94 StringTie exon 673546 673652 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "6"; scaffold_94 StringTie exon 674300 674429 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "7"; scaffold_94 StringTie exon 675015 675059 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "8"; scaffold_94 StringTie exon 676024 676065 1000 - . gene_id "MSTRG.140756"; transcript_id "MSTRG.140756.1"; exon_number "9"; scaffold_94 StringTie exon 772726 772991 1000 . . gene_id "MSTRG.140760"; transcript_id "MSTRG.140760.1"; exon_number "1"; scaffold_94 StringTie exon 977752 977998 1000 . . gene_id "MSTRG.140776"; transcript_id "MSTRG.140776.1"; exon_number "1"; scaffold_94 StringTie exon 991703 991945 1000 . . gene_id "MSTRG.140777"; transcript_id "MSTRG.140777.1"; exon_number "1"; scaffold_94 StringTie exon 1212358 1212628 1000 . . gene_id "MSTRG.140788"; transcript_id "MSTRG.140788.1"; exon_number "1"; scaffold_94 StringTie exon 1696216 1696471 1000 . . gene_id "MSTRG.140812"; transcript_id "MSTRG.140812.1"; exon_number "1"; scaffold_940 StringTie exon 88254 88503 1000 . . gene_id "MSTRG.140824"; transcript_id "MSTRG.140824.1"; exon_number "1"; scaffold_940 StringTie exon 196149 196548 1000 . . gene_id "MSTRG.140832"; transcript_id "MSTRG.140832.1"; exon_number "1"; scaffold_941 StringTie exon 83371 83664 1000 . . gene_id "MSTRG.140875"; transcript_id "MSTRG.140875.1"; exon_number "1"; scaffold_941 StringTie exon 270952 271226 1000 . . gene_id "MSTRG.140894"; transcript_id "MSTRG.140894.1"; exon_number "1"; scaffold_941 StringTie exon 328998 329226 1000 + . gene_id "MSTRG.140897"; transcript_id "MSTRG.140897.1"; exon_number "1"; scaffold_941 StringTie exon 347962 348205 1000 + . gene_id "MSTRG.140897"; transcript_id "MSTRG.140897.1"; exon_number "2"; scaffold_941 StringTie exon 348428 348525 1000 + . gene_id "MSTRG.140898"; transcript_id "MSTRG.140898.1"; exon_number "1"; scaffold_941 StringTie exon 349117 349529 1000 + . gene_id "MSTRG.140898"; transcript_id "MSTRG.140898.1"; exon_number "2"; scaffold_941 StringTie exon 370900 370944 1000 + . gene_id "MSTRG.140901"; transcript_id "MSTRG.140901.1"; exon_number "1"; scaffold_941 StringTie exon 371148 371311 1000 + . gene_id "MSTRG.140901"; transcript_id "MSTRG.140901.1"; exon_number "2"; scaffold_941 StringTie exon 371522 371910 1000 + . gene_id "MSTRG.140901"; transcript_id "MSTRG.140901.1"; exon_number "3"; scaffold_9412 StringTie exon 11644 11875 1000 . . gene_id "MSTRG.140904"; transcript_id "MSTRG.140904.1"; exon_number "1"; scaffold_9412 StringTie exon 12715 13203 1000 . . gene_id "MSTRG.140905"; transcript_id "MSTRG.140905.1"; exon_number "1"; scaffold_942 StringTie exon 333740 333977 1000 . . gene_id "MSTRG.140944"; transcript_id "MSTRG.140944.1"; exon_number "1"; scaffold_9421 StringTie exon 1358 1521 1000 - . gene_id "MSTRG.140952"; transcript_id "MSTRG.140952.1"; exon_number "1"; scaffold_9421 StringTie exon 2016 2146 1000 - . gene_id "MSTRG.140952"; transcript_id "MSTRG.140952.1"; exon_number "2"; scaffold_9421 StringTie exon 4554 4700 1000 - . gene_id "MSTRG.140952"; transcript_id "MSTRG.140952.1"; exon_number "3"; scaffold_9425 StringTie exon 2417 3135 1000 . . gene_id "MSTRG.140954"; transcript_id "MSTRG.140954.1"; exon_number "1"; scaffold_943 StringTie exon 4933 5151 1000 . . gene_id "MSTRG.140967"; transcript_id "MSTRG.140967.1"; exon_number "1"; scaffold_943 StringTie exon 248376 248457 1000 + . gene_id "MSTRG.140983"; transcript_id "MSTRG.140983.1"; exon_number "1"; scaffold_943 StringTie exon 262732 262824 1000 + . gene_id "MSTRG.140983"; transcript_id "MSTRG.140983.1"; exon_number "2"; scaffold_943 StringTie exon 267630 267692 1000 + . gene_id "MSTRG.140983"; transcript_id "MSTRG.140983.1"; exon_number "3"; scaffold_943 StringTie exon 268251 268482 1000 + . gene_id "MSTRG.140983"; transcript_id "MSTRG.140983.1"; exon_number "4"; scaffold_943 StringTie exon 301670 301789 1000 - . gene_id "MSTRG.140991"; transcript_id "MSTRG.140991.1"; exon_number "1"; scaffold_943 StringTie exon 302684 302720 1000 - . gene_id "MSTRG.140991"; transcript_id "MSTRG.140991.1"; exon_number "2"; scaffold_943 StringTie exon 305332 305430 1000 - . gene_id "MSTRG.140991"; transcript_id "MSTRG.140991.1"; exon_number "3"; scaffold_943 StringTie exon 338947 339335 1000 . . gene_id "MSTRG.140994"; transcript_id "MSTRG.140994.1"; exon_number "1"; scaffold_9434 StringTie exon 7210 7465 1000 . . gene_id "MSTRG.141013"; transcript_id "MSTRG.141013.1"; exon_number "1"; scaffold_944 StringTie exon 273883 274103 1000 . . gene_id "MSTRG.141036"; transcript_id "MSTRG.141036.1"; exon_number "1"; scaffold_9441 StringTie exon 8793 9130 1000 . . gene_id "MSTRG.141050"; transcript_id "MSTRG.141050.1"; exon_number "1"; scaffold_9444 StringTie exon 8762 8987 1000 . . gene_id "MSTRG.141056"; transcript_id "MSTRG.141056.1"; exon_number "1"; scaffold_9444 StringTie exon 17098 17151 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "1"; scaffold_9444 StringTie exon 17234 17277 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "2"; scaffold_9444 StringTie exon 17379 17466 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "3"; scaffold_9444 StringTie exon 17663 17747 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "4"; scaffold_9444 StringTie exon 17880 18036 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "5"; scaffold_9444 StringTie exon 18272 18347 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "6"; scaffold_9444 StringTie exon 18497 18541 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "7"; scaffold_9444 StringTie exon 18630 18710 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "8"; scaffold_9444 StringTie exon 18966 19080 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "9"; scaffold_9444 StringTie exon 22483 22638 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "10"; scaffold_9444 StringTie exon 22816 22926 1000 + . gene_id "MSTRG.141058"; transcript_id "MSTRG.141058.1"; exon_number "11"; scaffold_945 StringTie exon 41418 41466 1000 + . gene_id "MSTRG.141073"; transcript_id "MSTRG.141073.1"; exon_number "1"; scaffold_945 StringTie exon 41625 41805 1000 + . gene_id "MSTRG.141073"; transcript_id "MSTRG.141073.1"; exon_number "2"; scaffold_945 StringTie exon 42649 42693 1000 + . gene_id "MSTRG.141073"; transcript_id "MSTRG.141073.1"; exon_number "3"; scaffold_945 StringTie exon 42796 42868 1000 + . gene_id "MSTRG.141073"; transcript_id "MSTRG.141073.1"; exon_number "4"; scaffold_945 StringTie exon 215650 216027 1000 . . gene_id "MSTRG.141085"; transcript_id "MSTRG.141085.1"; exon_number "1"; scaffold_945 StringTie exon 238006 238348 1000 . . gene_id "MSTRG.141090"; transcript_id "MSTRG.141090.1"; exon_number "1"; scaffold_946 StringTie exon 164797 165055 1000 . . gene_id "MSTRG.141124"; transcript_id "MSTRG.141124.1"; exon_number "1"; scaffold_946 StringTie exon 165599 165860 1000 . . gene_id "MSTRG.141125"; transcript_id "MSTRG.141125.1"; exon_number "1"; scaffold_9460 StringTie exon 20706 21020 1000 . . gene_id "MSTRG.141141"; transcript_id "MSTRG.141141.1"; exon_number "1"; scaffold_947 StringTie exon 241929 242528 1000 . . gene_id "MSTRG.141183"; transcript_id "MSTRG.141183.1"; exon_number "1"; scaffold_947 StringTie exon 313874 314098 1000 . . gene_id "MSTRG.141190"; transcript_id "MSTRG.141190.1"; exon_number "1"; scaffold_947 StringTie exon 372725 372743 1000 - . gene_id "MSTRG.141197"; transcript_id "MSTRG.141197.1"; exon_number "1"; scaffold_947 StringTie exon 377002 377065 1000 - . gene_id "MSTRG.141197"; transcript_id "MSTRG.141197.1"; exon_number "2"; scaffold_947 StringTie exon 377148 377222 1000 - . gene_id "MSTRG.141197"; transcript_id "MSTRG.141197.1"; exon_number "3"; scaffold_947 StringTie exon 377311 377491 1000 - . gene_id "MSTRG.141197"; transcript_id "MSTRG.141197.1"; exon_number "4"; scaffold_947 StringTie exon 377648 377680 1000 - . gene_id "MSTRG.141197"; transcript_id "MSTRG.141197.1"; exon_number "5"; scaffold_9476 StringTie exon 19583 20242 1000 - . gene_id "MSTRG.141212"; transcript_id "MSTRG.141212.1"; exon_number "1"; scaffold_9476 StringTie exon 20419 20481 1000 - . gene_id "MSTRG.141212"; transcript_id "MSTRG.141212.1"; exon_number "2"; scaffold_948 StringTie exon 14263 14517 1000 . . gene_id "MSTRG.141217"; transcript_id "MSTRG.141217.1"; exon_number "1"; scaffold_948 StringTie exon 320897 321203 1000 . . gene_id "MSTRG.141231"; transcript_id "MSTRG.141231.1"; exon_number "1"; scaffold_9482 StringTie exon 14432 15000 1000 . . gene_id "MSTRG.141244"; transcript_id "MSTRG.141244.1"; exon_number "1"; scaffold_949 StringTie exon 65118 65357 1000 . . gene_id "MSTRG.141267"; transcript_id "MSTRG.141267.1"; exon_number "1"; scaffold_949 StringTie exon 187598 187804 1000 + . gene_id "MSTRG.141282"; transcript_id "MSTRG.141282.1"; exon_number "1"; scaffold_9493 StringTie exon 42 262 1000 + . gene_id "MSTRG.141308"; transcript_id "MSTRG.141308.1"; exon_number "1"; scaffold_95 StringTie exon 21796 21896 1000 + . gene_id "MSTRG.141315"; transcript_id "MSTRG.141315.1"; exon_number "1"; scaffold_95 StringTie exon 22631 22760 1000 + . gene_id "MSTRG.141315"; transcript_id "MSTRG.141315.1"; exon_number "2"; scaffold_95 StringTie exon 27359 27588 1000 + . gene_id "MSTRG.141315"; transcript_id "MSTRG.141315.1"; exon_number "3"; scaffold_95 StringTie exon 27865 28984 1000 + . gene_id "MSTRG.141315"; transcript_id "MSTRG.141315.1"; exon_number "4"; scaffold_95 StringTie exon 155127 155382 1000 . . gene_id "MSTRG.141329"; transcript_id "MSTRG.141329.1"; exon_number "1"; scaffold_95 StringTie exon 487922 488233 1000 . . gene_id "MSTRG.141349"; transcript_id "MSTRG.141349.1"; exon_number "1"; scaffold_95 StringTie exon 649539 649739 1000 . . gene_id "MSTRG.141354"; transcript_id "MSTRG.141354.1"; exon_number "1"; scaffold_95 StringTie exon 775557 775824 1000 . . gene_id "MSTRG.141364"; transcript_id "MSTRG.141364.1"; exon_number "1"; scaffold_95 StringTie exon 883274 883641 1000 . . gene_id "MSTRG.141378"; transcript_id "MSTRG.141378.1"; exon_number "1"; scaffold_95 StringTie exon 1200182 1201121 1000 . . gene_id "MSTRG.141394"; transcript_id "MSTRG.141394.1"; exon_number "1"; scaffold_95 StringTie exon 1211704 1211956 1000 - . gene_id "MSTRG.141398"; transcript_id "MSTRG.141398.1"; exon_number "1"; scaffold_95 StringTie exon 1212060 1212177 1000 - . gene_id "MSTRG.141398"; transcript_id "MSTRG.141398.1"; exon_number "2"; scaffold_95 StringTie exon 1220947 1221060 1000 - . gene_id "MSTRG.141398"; transcript_id "MSTRG.141398.1"; exon_number "3"; scaffold_95 StringTie exon 1243209 1243534 1000 - . gene_id "MSTRG.141398"; transcript_id "MSTRG.141398.1"; exon_number "4"; scaffold_95 StringTie exon 1353731 1353770 1000 - . gene_id "MSTRG.141409"; transcript_id "MSTRG.141409.1"; exon_number "1"; scaffold_95 StringTie exon 1353884 1354000 1000 - . gene_id "MSTRG.141409"; transcript_id "MSTRG.141409.1"; exon_number "2"; scaffold_95 StringTie exon 1354194 1354244 1000 - . gene_id "MSTRG.141409"; transcript_id "MSTRG.141409.1"; exon_number "3"; scaffold_95 StringTie exon 1354805 1354872 1000 - . gene_id "MSTRG.141409"; transcript_id "MSTRG.141409.1"; exon_number "4"; scaffold_95 StringTie exon 1356928 1357054 1000 - . gene_id "MSTRG.141409"; transcript_id "MSTRG.141409.1"; exon_number "5"; scaffold_95 StringTie exon 1650454 1650801 1000 . . gene_id "MSTRG.141425"; transcript_id "MSTRG.141425.1"; exon_number "1"; scaffold_950 StringTie exon 58254 58609 1000 . . gene_id "MSTRG.141432"; transcript_id "MSTRG.141432.1"; exon_number "1"; scaffold_9503 StringTie exon 947 1129 1000 - . gene_id "MSTRG.141465"; transcript_id "MSTRG.141465.1"; exon_number "1"; scaffold_9503 StringTie exon 1768 1878 1000 - . gene_id "MSTRG.141465"; transcript_id "MSTRG.141465.1"; exon_number "2"; scaffold_9508 StringTie exon 1769 2149 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "1"; scaffold_9508 StringTie exon 6311 6427 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "2"; scaffold_9508 StringTie exon 9568 9649 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "3"; scaffold_9508 StringTie exon 10486 10566 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "4"; scaffold_9508 StringTie exon 10816 10895 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "5"; scaffold_9508 StringTie exon 11003 11109 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "6"; scaffold_9508 StringTie exon 15401 15438 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "7"; scaffold_9508 StringTie exon 17112 17254 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "8"; scaffold_9508 StringTie exon 17549 17560 1000 + . gene_id "MSTRG.141475"; transcript_id "MSTRG.141475.1"; exon_number "9"; scaffold_951 StringTie exon 363616 363904 1000 . . gene_id "MSTRG.141510"; transcript_id "MSTRG.141510.1"; exon_number "1"; scaffold_9510 StringTie exon 2496 2863 1000 . . gene_id "MSTRG.141518"; transcript_id "MSTRG.141518.1"; exon_number "1"; scaffold_9517 StringTie exon 2902 3193 1000 . . gene_id "MSTRG.141530"; transcript_id "MSTRG.141530.1"; exon_number "1"; scaffold_9518 StringTie exon 17459 17690 1000 . . gene_id "MSTRG.141535"; transcript_id "MSTRG.141535.1"; exon_number "1"; scaffold_9518 StringTie exon 20465 20723 1000 + . gene_id "MSTRG.141536"; transcript_id "MSTRG.141536.1"; exon_number "1"; scaffold_9518 StringTie exon 21392 22520 1000 + . gene_id "MSTRG.141536"; transcript_id "MSTRG.141536.1"; exon_number "2"; scaffold_952 StringTie exon 389891 390011 1000 - . gene_id "MSTRG.141588"; transcript_id "MSTRG.141588.1"; exon_number "1"; scaffold_952 StringTie exon 390436 390526 1000 - . gene_id "MSTRG.141588"; transcript_id "MSTRG.141588.1"; exon_number "2"; scaffold_952 StringTie exon 391012 391262 1000 - . gene_id "MSTRG.141588"; transcript_id "MSTRG.141588.1"; exon_number "3"; scaffold_9523 StringTie exon 4924 5237 1000 . . gene_id "MSTRG.141599"; transcript_id "MSTRG.141599.1"; exon_number "1"; scaffold_953 StringTie exon 21611 21819 1000 . . gene_id "MSTRG.141618"; transcript_id "MSTRG.141618.1"; exon_number "1"; scaffold_953 StringTie exon 126278 127084 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "1"; scaffold_953 StringTie exon 127187 127317 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "2"; scaffold_953 StringTie exon 127679 127777 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "3"; scaffold_953 StringTie exon 127897 127984 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "4"; scaffold_953 StringTie exon 128137 128234 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "5"; scaffold_953 StringTie exon 128398 128486 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "6"; scaffold_953 StringTie exon 134211 134278 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "7"; scaffold_953 StringTie exon 134595 134726 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "8"; scaffold_953 StringTie exon 135078 135203 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "9"; scaffold_953 StringTie exon 135331 135482 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "10"; scaffold_953 StringTie exon 135713 135851 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "11"; scaffold_953 StringTie exon 136107 136241 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "12"; scaffold_953 StringTie exon 137170 137265 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "13"; scaffold_953 StringTie exon 137544 137654 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "14"; scaffold_953 StringTie exon 138236 138305 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "15"; scaffold_953 StringTie exon 138421 138570 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "16"; scaffold_953 StringTie exon 138918 139038 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "17"; scaffold_953 StringTie exon 139326 139355 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "18"; scaffold_953 StringTie exon 141054 141082 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "19"; scaffold_953 StringTie exon 141364 141480 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "20"; scaffold_953 StringTie exon 144293 144427 1000 - . gene_id "MSTRG.141626"; transcript_id "MSTRG.141626.1"; exon_number "21"; scaffold_953 StringTie exon 176743 176979 1000 . . gene_id "MSTRG.141630"; transcript_id "MSTRG.141630.1"; exon_number "1"; scaffold_953 StringTie exon 303790 304706 1000 . . gene_id "MSTRG.141646"; transcript_id "MSTRG.141646.1"; exon_number "1"; scaffold_953 StringTie exon 324847 325792 1000 . . gene_id "MSTRG.141648"; transcript_id "MSTRG.141648.1"; exon_number "1"; scaffold_953 StringTie exon 354612 354842 1000 . . gene_id "MSTRG.141653"; transcript_id "MSTRG.141653.1"; exon_number "1"; scaffold_953 StringTie exon 397531 397768 1000 . . gene_id "MSTRG.141658"; transcript_id "MSTRG.141658.1"; exon_number "1"; scaffold_9530 StringTie exon 18777 19009 1000 . . gene_id "MSTRG.141662"; transcript_id "MSTRG.141662.1"; exon_number "1"; scaffold_9531 StringTie exon 19930 20266 1000 - . gene_id "MSTRG.141665"; transcript_id "MSTRG.141665.1"; exon_number "1"; scaffold_9535 StringTie exon 18684 18963 1000 . . gene_id "MSTRG.141670"; transcript_id "MSTRG.141670.1"; exon_number "1"; scaffold_954 StringTie exon 317199 317268 1000 - . gene_id "MSTRG.141700"; transcript_id "MSTRG.141700.1"; exon_number "1"; scaffold_954 StringTie exon 317361 317438 1000 - . gene_id "MSTRG.141700"; transcript_id "MSTRG.141700.1"; exon_number "2"; scaffold_954 StringTie exon 318045 318155 1000 - . gene_id "MSTRG.141700"; transcript_id "MSTRG.141700.1"; exon_number "3"; scaffold_954 StringTie exon 318307 318423 1000 - . gene_id "MSTRG.141700"; transcript_id "MSTRG.141700.1"; exon_number "4"; scaffold_954 StringTie exon 318526 318556 1000 - . gene_id "MSTRG.141700"; transcript_id "MSTRG.141700.1"; exon_number "5"; scaffold_954 StringTie exon 401184 401409 1000 . . gene_id "MSTRG.141707"; transcript_id "MSTRG.141707.1"; exon_number "1"; scaffold_9544 StringTie exon 5203 6114 1000 . . gene_id "MSTRG.141713"; transcript_id "MSTRG.141713.1"; exon_number "1"; scaffold_9550 StringTie exon 12166 12437 1000 . . gene_id "MSTRG.141741"; transcript_id "MSTRG.141741.1"; exon_number "1"; scaffold_9551 StringTie exon 6016 6264 1000 . . gene_id "MSTRG.141743"; transcript_id "MSTRG.141743.1"; exon_number "1"; scaffold_9553 StringTie exon 14387 14439 1000 - . gene_id "MSTRG.141752"; transcript_id "MSTRG.141752.1"; exon_number "1"; scaffold_9553 StringTie exon 14586 14727 1000 - . gene_id "MSTRG.141752"; transcript_id "MSTRG.141752.1"; exon_number "2"; scaffold_9553 StringTie exon 20807 21135 1000 - . gene_id "MSTRG.141752"; transcript_id "MSTRG.141752.1"; exon_number "3"; scaffold_956 StringTie exon 118029 118388 1000 . . gene_id "MSTRG.141776"; transcript_id "MSTRG.141776.1"; exon_number "1"; scaffold_956 StringTie exon 135158 136194 1000 . . gene_id "MSTRG.141780"; transcript_id "MSTRG.141780.1"; exon_number "1"; scaffold_956 StringTie exon 260699 261039 1000 . . gene_id "MSTRG.141791"; transcript_id "MSTRG.141791.1"; exon_number "1"; scaffold_957 StringTie exon 185469 185818 1000 . . gene_id "MSTRG.141828"; transcript_id "MSTRG.141828.1"; exon_number "1"; scaffold_957 StringTie exon 208950 209115 1000 - . gene_id "MSTRG.141832"; transcript_id "MSTRG.141832.2"; exon_number "1"; scaffold_957 StringTie exon 210785 211064 1000 - . gene_id "MSTRG.141832"; transcript_id "MSTRG.141832.2"; exon_number "2"; scaffold_957 StringTie exon 211552 211764 1000 - . gene_id "MSTRG.141832"; transcript_id "MSTRG.141832.2"; exon_number "3"; scaffold_957 StringTie exon 212178 212417 1000 - . gene_id "MSTRG.141832"; transcript_id "MSTRG.141832.2"; exon_number "4"; scaffold_957 StringTie exon 213409 213612 1000 - . gene_id "MSTRG.141832"; transcript_id "MSTRG.141832.2"; exon_number "5"; scaffold_957 StringTie exon 217309 217437 1000 - . gene_id "MSTRG.141832"; transcript_id "MSTRG.141832.2"; exon_number "6"; scaffold_957 StringTie exon 217880 218111 1000 - . gene_id "MSTRG.141832"; transcript_id "MSTRG.141832.2"; exon_number "7"; scaffold_957 StringTie exon 331813 332089 1000 . . gene_id "MSTRG.141838"; transcript_id "MSTRG.141838.1"; exon_number "1"; scaffold_9579 StringTie exon 12153 12445 1000 . . gene_id "MSTRG.141863"; transcript_id "MSTRG.141863.1"; exon_number "1"; scaffold_958 StringTie exon 91731 92069 1000 . . gene_id "MSTRG.141874"; transcript_id "MSTRG.141874.1"; exon_number "1"; scaffold_958 StringTie exon 113416 113769 1000 . . gene_id "MSTRG.141875"; transcript_id "MSTRG.141875.1"; exon_number "1"; scaffold_958 StringTie exon 289936 290209 1000 + . gene_id "MSTRG.141891"; transcript_id "MSTRG.141891.1"; exon_number "1"; scaffold_958 StringTie exon 290572 290649 1000 + . gene_id "MSTRG.141891"; transcript_id "MSTRG.141891.1"; exon_number "2"; scaffold_959 StringTie exon 96734 96953 1000 . . gene_id "MSTRG.141916"; transcript_id "MSTRG.141916.1"; exon_number "1"; scaffold_96 StringTie exon 27879 28441 1000 - . gene_id "MSTRG.141969"; transcript_id "MSTRG.141969.1"; exon_number "1"; scaffold_96 StringTie exon 29776 29860 1000 - . gene_id "MSTRG.141969"; transcript_id "MSTRG.141969.1"; exon_number "2"; scaffold_96 StringTie exon 141701 141844 1000 + . gene_id "MSTRG.141976"; transcript_id "MSTRG.141976.1"; exon_number "1"; scaffold_96 StringTie exon 142900 143001 1000 + . gene_id "MSTRG.141976"; transcript_id "MSTRG.141976.1"; exon_number "2"; scaffold_96 StringTie exon 143163 143282 1000 + . gene_id "MSTRG.141976"; transcript_id "MSTRG.141976.1"; exon_number "3"; scaffold_96 StringTie exon 147310 147461 1000 + . gene_id "MSTRG.141976"; transcript_id "MSTRG.141976.1"; exon_number "4"; scaffold_96 StringTie exon 147712 147889 1000 + . gene_id "MSTRG.141976"; transcript_id "MSTRG.141976.1"; exon_number "5"; scaffold_96 StringTie exon 249740 250289 1000 . . gene_id "MSTRG.141987"; transcript_id "MSTRG.141987.1"; exon_number "1"; scaffold_96 StringTie exon 353674 353921 1000 . . gene_id "MSTRG.141992"; transcript_id "MSTRG.141992.1"; exon_number "1"; scaffold_96 StringTie exon 355201 355471 1000 . . gene_id "MSTRG.141993"; transcript_id "MSTRG.141993.1"; exon_number "1"; scaffold_96 StringTie exon 461730 461968 1000 . . gene_id "MSTRG.142006"; transcript_id "MSTRG.142006.1"; exon_number "1"; scaffold_96 StringTie exon 503289 503501 1000 . . gene_id "MSTRG.142013"; transcript_id "MSTRG.142013.1"; exon_number "1"; scaffold_96 StringTie exon 1174132 1174672 1000 . . gene_id "MSTRG.142048"; transcript_id "MSTRG.142048.1"; exon_number "1"; scaffold_96 StringTie exon 1201988 1202220 1000 . . gene_id "MSTRG.142050"; transcript_id "MSTRG.142050.1"; exon_number "1"; scaffold_960 StringTie exon 27300 27571 1000 . . gene_id "MSTRG.142081"; transcript_id "MSTRG.142081.1"; exon_number "1"; scaffold_9606 StringTie exon 23030 23249 1000 . . gene_id "MSTRG.142124"; transcript_id "MSTRG.142124.1"; exon_number "1"; scaffold_9608 StringTie exon 19719 19925 1000 . . gene_id "MSTRG.142127"; transcript_id "MSTRG.142127.1"; exon_number "1"; scaffold_961 StringTie exon 134430 134680 1000 . . gene_id "MSTRG.142137"; transcript_id "MSTRG.142137.1"; exon_number "1"; scaffold_961 StringTie exon 372994 373201 1000 . . gene_id "MSTRG.142153"; transcript_id "MSTRG.142153.1"; exon_number "1"; scaffold_9614 StringTie exon 17451 17694 1000 . . gene_id "MSTRG.142158"; transcript_id "MSTRG.142158.1"; exon_number "1"; scaffold_9615 StringTie exon 16006 16228 1000 . . gene_id "MSTRG.142159"; transcript_id "MSTRG.142159.1"; exon_number "1"; scaffold_9615 StringTie exon 21429 21668 1000 - . gene_id "MSTRG.142160"; transcript_id "MSTRG.142160.1"; exon_number "1"; scaffold_9615 StringTie exon 22809 22863 1000 - . gene_id "MSTRG.142160"; transcript_id "MSTRG.142160.1"; exon_number "2"; scaffold_962 StringTie exon 361006 361386 1000 . . gene_id "MSTRG.142186"; transcript_id "MSTRG.142186.1"; exon_number "1"; scaffold_9622 StringTie exon 14179 14285 1000 + . gene_id "MSTRG.142196"; transcript_id "MSTRG.142196.1"; exon_number "1"; scaffold_9622 StringTie exon 14823 14922 1000 + . gene_id "MSTRG.142196"; transcript_id "MSTRG.142196.1"; exon_number "2"; scaffold_964 StringTie exon 245 460 1000 . . gene_id "MSTRG.142259"; transcript_id "MSTRG.142259.1"; exon_number "1"; scaffold_964 StringTie exon 27755 28006 1000 . . gene_id "MSTRG.142264"; transcript_id "MSTRG.142264.1"; exon_number "1"; scaffold_964 StringTie exon 229722 229971 1000 . . gene_id "MSTRG.142271"; transcript_id "MSTRG.142271.1"; exon_number "1"; scaffold_964 StringTie exon 240239 240849 1000 . . gene_id "MSTRG.142273"; transcript_id "MSTRG.142273.1"; exon_number "1"; scaffold_9646 StringTie exon 14196 14613 1000 . . gene_id "MSTRG.142299"; transcript_id "MSTRG.142299.1"; exon_number "1"; scaffold_965 StringTie exon 151819 151902 1000 - . gene_id "MSTRG.142322"; transcript_id "MSTRG.142322.1"; exon_number "1"; scaffold_965 StringTie exon 152112 152266 1000 - . gene_id "MSTRG.142322"; transcript_id "MSTRG.142322.1"; exon_number "2"; scaffold_965 StringTie exon 152489 152603 1000 - . gene_id "MSTRG.142322"; transcript_id "MSTRG.142322.1"; exon_number "3"; scaffold_965 StringTie exon 153543 153630 1000 - . gene_id "MSTRG.142322"; transcript_id "MSTRG.142322.1"; exon_number "4"; scaffold_965 StringTie exon 369510 369623 1000 + . gene_id "MSTRG.142337"; transcript_id "MSTRG.142337.1"; exon_number "1"; scaffold_965 StringTie exon 382368 382553 1000 + . gene_id "MSTRG.142337"; transcript_id "MSTRG.142337.1"; exon_number "2"; scaffold_9651 StringTie exon 12678 12931 1000 . . gene_id "MSTRG.142345"; transcript_id "MSTRG.142345.1"; exon_number "1"; scaffold_9653 StringTie exon 12239 12484 1000 . . gene_id "MSTRG.142346"; transcript_id "MSTRG.142346.1"; exon_number "1"; scaffold_9654 StringTie exon 2494 2760 1000 . . gene_id "MSTRG.142348"; transcript_id "MSTRG.142348.1"; exon_number "1"; scaffold_9655 StringTie exon 22914 23135 1000 . . gene_id "MSTRG.142353"; transcript_id "MSTRG.142353.1"; exon_number "1"; scaffold_9658 StringTie exon 15804 16039 1000 . . gene_id "MSTRG.142359"; transcript_id "MSTRG.142359.1"; exon_number "1"; scaffold_966 StringTie exon 112874 113292 1000 + . gene_id "MSTRG.142378"; transcript_id "MSTRG.142378.1"; exon_number "1"; scaffold_966 StringTie exon 113512 113634 1000 + . gene_id "MSTRG.142378"; transcript_id "MSTRG.142378.1"; exon_number "2"; scaffold_966 StringTie exon 344139 344560 1000 - . gene_id "MSTRG.142388"; transcript_id "MSTRG.142388.1"; exon_number "1"; scaffold_966 StringTie exon 344716 344877 1000 - . gene_id "MSTRG.142388"; transcript_id "MSTRG.142388.1"; exon_number "2"; scaffold_966 StringTie exon 345028 345087 1000 - . gene_id "MSTRG.142388"; transcript_id "MSTRG.142388.1"; exon_number "3"; scaffold_966 StringTie exon 345546 345720 1000 - . gene_id "MSTRG.142388"; transcript_id "MSTRG.142388.1"; exon_number "4"; scaffold_967 StringTie exon 32590 32806 1000 . . gene_id "MSTRG.142422"; transcript_id "MSTRG.142422.1"; exon_number "1"; scaffold_967 StringTie exon 48560 48666 1000 - . gene_id "MSTRG.142426"; transcript_id "MSTRG.142426.2"; exon_number "1"; scaffold_967 StringTie exon 57888 58004 1000 - . gene_id "MSTRG.142426"; transcript_id "MSTRG.142426.2"; exon_number "2"; scaffold_967 StringTie exon 65602 65887 1000 - . gene_id "MSTRG.142426"; transcript_id "MSTRG.142426.2"; exon_number "3"; scaffold_9674 StringTie exon 17608 17701 1000 - . gene_id "MSTRG.142453"; transcript_id "MSTRG.142453.1"; exon_number "1"; scaffold_9674 StringTie exon 17735 17882 1000 - . gene_id "MSTRG.142453"; transcript_id "MSTRG.142453.1"; exon_number "2"; scaffold_9676 StringTie exon 9302 9525 1000 . . gene_id "MSTRG.142459"; transcript_id "MSTRG.142459.1"; exon_number "1"; scaffold_9676 StringTie exon 21335 21912 1000 + . gene_id "MSTRG.142460"; transcript_id "MSTRG.142460.1"; exon_number "1"; scaffold_968 StringTie exon 141633 141886 1000 . . gene_id "MSTRG.142474"; transcript_id "MSTRG.142474.1"; exon_number "1"; scaffold_968 StringTie exon 159259 159559 1000 . . gene_id "MSTRG.142476"; transcript_id "MSTRG.142476.1"; exon_number "1"; scaffold_9682 StringTie exon 5400 5686 1000 . . gene_id "MSTRG.142500"; transcript_id "MSTRG.142500.1"; exon_number "1"; scaffold_9684 StringTie exon 4751 4951 1000 . . gene_id "MSTRG.142509"; transcript_id "MSTRG.142509.1"; exon_number "1"; scaffold_969 StringTie exon 140954 141022 1000 - . gene_id "MSTRG.142537"; transcript_id "MSTRG.142537.3"; exon_number "1"; scaffold_969 StringTie exon 141227 141307 1000 - . gene_id "MSTRG.142537"; transcript_id "MSTRG.142537.3"; exon_number "2"; scaffold_969 StringTie exon 145214 145310 1000 - . gene_id "MSTRG.142537"; transcript_id "MSTRG.142537.3"; exon_number "3"; scaffold_969 StringTie exon 145478 145617 1000 - . gene_id "MSTRG.142537"; transcript_id "MSTRG.142537.3"; exon_number "4"; scaffold_969 StringTie exon 146895 146948 1000 - . gene_id "MSTRG.142537"; transcript_id "MSTRG.142537.3"; exon_number "5"; scaffold_969 StringTie exon 148399 148601 1000 - . gene_id "MSTRG.142537"; transcript_id "MSTRG.142537.3"; exon_number "6"; scaffold_969 StringTie exon 183564 183595 1000 - . gene_id "MSTRG.142537"; transcript_id "MSTRG.142537.3"; exon_number "7"; scaffold_969 StringTie exon 251666 251884 1000 . . gene_id "MSTRG.142551"; transcript_id "MSTRG.142551.1"; exon_number "1"; scaffold_969 StringTie exon 383597 383817 1000 . . gene_id "MSTRG.142555"; transcript_id "MSTRG.142555.1"; exon_number "1"; scaffold_9699 StringTie exon 14826 15060 1000 . . gene_id "MSTRG.142576"; transcript_id "MSTRG.142576.1"; exon_number "1"; scaffold_97 StringTie exon 497806 498014 1000 + . gene_id "MSTRG.142610"; transcript_id "MSTRG.142610.1"; exon_number "1"; scaffold_97 StringTie exon 498169 498389 1000 + . gene_id "MSTRG.142610"; transcript_id "MSTRG.142610.1"; exon_number "2"; scaffold_97 StringTie exon 499292 499429 1000 + . gene_id "MSTRG.142610"; transcript_id "MSTRG.142610.1"; exon_number "3"; scaffold_97 StringTie exon 499764 499959 1000 + . gene_id "MSTRG.142610"; transcript_id "MSTRG.142610.1"; exon_number "4"; scaffold_97 StringTie exon 503795 503916 1000 + . gene_id "MSTRG.142610"; transcript_id "MSTRG.142610.1"; exon_number "5"; scaffold_97 StringTie exon 504444 504630 1000 + . gene_id "MSTRG.142610"; transcript_id "MSTRG.142610.1"; exon_number "6"; scaffold_97 StringTie exon 506498 506530 1000 + . gene_id "MSTRG.142610"; transcript_id "MSTRG.142610.1"; exon_number "7"; scaffold_97 StringTie exon 840133 840527 1000 . . gene_id "MSTRG.142632"; transcript_id "MSTRG.142632.1"; exon_number "1"; scaffold_97 StringTie exon 890454 890814 1000 . . gene_id "MSTRG.142639"; transcript_id "MSTRG.142639.1"; exon_number "1"; scaffold_97 StringTie exon 930779 931044 1000 . . gene_id "MSTRG.142643"; transcript_id "MSTRG.142643.1"; exon_number "1"; scaffold_97 StringTie exon 1166986 1167286 1000 . . gene_id "MSTRG.142652"; transcript_id "MSTRG.142652.1"; exon_number "1"; scaffold_970 StringTie exon 241261 241483 1000 . . gene_id "MSTRG.142701"; transcript_id "MSTRG.142701.1"; exon_number "1"; scaffold_970 StringTie exon 248678 250810 1000 . . gene_id "MSTRG.142702"; transcript_id "MSTRG.142702.1"; exon_number "1"; scaffold_970 StringTie exon 332954 333632 1000 . . gene_id "MSTRG.142712"; transcript_id "MSTRG.142712.1"; exon_number "1"; scaffold_970 StringTie exon 384714 385073 1000 . . gene_id "MSTRG.142717"; transcript_id "MSTRG.142717.1"; exon_number "1"; scaffold_9709 StringTie exon 11501 12725 1000 - . gene_id "MSTRG.142743"; transcript_id "MSTRG.142743.1"; exon_number "1"; scaffold_9709 StringTie exon 13018 13306 1000 - . gene_id "MSTRG.142743"; transcript_id "MSTRG.142743.1"; exon_number "2"; scaffold_9709 StringTie exon 13493 13721 1000 - . gene_id "MSTRG.142743"; transcript_id "MSTRG.142743.1"; exon_number "3"; scaffold_971 StringTie exon 68855 68934 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "1"; scaffold_971 StringTie exon 69173 69378 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "2"; scaffold_971 StringTie exon 69548 69742 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "3"; scaffold_971 StringTie exon 69844 69992 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "4"; scaffold_971 StringTie exon 70187 70280 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "5"; scaffold_971 StringTie exon 70378 70614 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "6"; scaffold_971 StringTie exon 70864 70986 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "7"; scaffold_971 StringTie exon 71105 71230 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "8"; scaffold_971 StringTie exon 71408 71524 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "9"; scaffold_971 StringTie exon 72272 72378 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "10"; scaffold_971 StringTie exon 72637 72769 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "11"; scaffold_971 StringTie exon 72886 73008 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "12"; scaffold_971 StringTie exon 73102 73224 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "13"; scaffold_971 StringTie exon 73339 73479 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "14"; scaffold_971 StringTie exon 73587 73724 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "15"; scaffold_971 StringTie exon 73829 73948 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "16"; scaffold_971 StringTie exon 74221 74486 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "17"; scaffold_971 StringTie exon 74612 74790 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "18"; scaffold_971 StringTie exon 75133 75239 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "19"; scaffold_971 StringTie exon 75600 75719 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "20"; scaffold_971 StringTie exon 75986 76162 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "21"; scaffold_971 StringTie exon 78001 78141 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "22"; scaffold_971 StringTie exon 87014 87171 1000 + . gene_id "MSTRG.142750"; transcript_id "MSTRG.142750.1"; exon_number "23"; scaffold_971 StringTie exon 87435 87599 1000 + . gene_id "MSTRG.142751"; transcript_id "MSTRG.142751.1"; exon_number "1"; scaffold_971 StringTie exon 89604 89787 1000 + . gene_id "MSTRG.142751"; transcript_id "MSTRG.142751.1"; exon_number "2"; scaffold_971 StringTie exon 89920 90021 1000 + . gene_id "MSTRG.142751"; transcript_id "MSTRG.142751.1"; exon_number "3"; scaffold_971 StringTie exon 90116 90189 1000 + . gene_id "MSTRG.142751"; transcript_id "MSTRG.142751.1"; exon_number "4"; scaffold_971 StringTie exon 90452 90545 1000 + . gene_id "MSTRG.142751"; transcript_id "MSTRG.142751.1"; exon_number "5"; scaffold_971 StringTie exon 91681 91825 1000 + . gene_id "MSTRG.142751"; transcript_id "MSTRG.142751.1"; exon_number "6"; scaffold_971 StringTie exon 92011 93817 1000 + . gene_id "MSTRG.142751"; transcript_id "MSTRG.142751.1"; exon_number "7"; scaffold_971 StringTie exon 135200 135285 1000 - . gene_id "MSTRG.142758"; transcript_id "MSTRG.142758.1"; exon_number "1"; scaffold_971 StringTie exon 135364 135412 1000 - . gene_id "MSTRG.142758"; transcript_id "MSTRG.142758.1"; exon_number "2"; scaffold_971 StringTie exon 135660 135742 1000 - . gene_id "MSTRG.142758"; transcript_id "MSTRG.142758.1"; exon_number "3"; scaffold_971 StringTie exon 138263 138439 1000 - . gene_id "MSTRG.142758"; transcript_id "MSTRG.142758.1"; exon_number "4"; scaffold_971 StringTie exon 138722 138842 1000 - . gene_id "MSTRG.142758"; transcript_id "MSTRG.142758.1"; exon_number "5"; scaffold_971 StringTie exon 139067 139122 1000 - . gene_id "MSTRG.142758"; transcript_id "MSTRG.142758.1"; exon_number "6"; scaffold_971 StringTie exon 139818 139890 1000 - . gene_id "MSTRG.142758"; transcript_id "MSTRG.142758.1"; exon_number "7"; scaffold_971 StringTie exon 348283 348493 1000 . . gene_id "MSTRG.142774"; transcript_id "MSTRG.142774.1"; exon_number "1"; scaffold_972 StringTie exon 334346 334399 1000 - . gene_id "MSTRG.142822"; transcript_id "MSTRG.142822.2"; exon_number "1"; scaffold_972 StringTie exon 335356 335500 1000 - . gene_id "MSTRG.142822"; transcript_id "MSTRG.142822.2"; exon_number "2"; scaffold_972 StringTie exon 347671 348140 1000 - . gene_id "MSTRG.142822"; transcript_id "MSTRG.142822.2"; exon_number "3"; scaffold_972 StringTie exon 379280 379537 1000 + . gene_id "MSTRG.142824"; transcript_id "MSTRG.142824.2"; exon_number "1"; scaffold_972 StringTie exon 383857 383979 1000 + . gene_id "MSTRG.142824"; transcript_id "MSTRG.142824.2"; exon_number "2"; scaffold_972 StringTie exon 384487 384598 1000 + . gene_id "MSTRG.142824"; transcript_id "MSTRG.142824.2"; exon_number "3"; scaffold_9721 StringTie exon 1522 1722 1000 . . gene_id "MSTRG.142828"; transcript_id "MSTRG.142828.1"; exon_number "1"; scaffold_9724 StringTie exon 7191 7568 1000 . . gene_id "MSTRG.142834"; transcript_id "MSTRG.142834.1"; exon_number "1"; scaffold_9729 StringTie exon 835 1061 1000 . . gene_id "MSTRG.142839"; transcript_id "MSTRG.142839.1"; exon_number "1"; scaffold_973 StringTie exon 8809 9015 1000 . . gene_id "MSTRG.142842"; transcript_id "MSTRG.142842.1"; exon_number "1"; scaffold_9742 StringTie exon 5415 5671 1000 . . gene_id "MSTRG.142920"; transcript_id "MSTRG.142920.1"; exon_number "1"; scaffold_9747 StringTie exon 15623 15897 1000 . . gene_id "MSTRG.142930"; transcript_id "MSTRG.142930.1"; exon_number "1"; scaffold_9747 StringTie exon 20802 21118 1000 . . gene_id "MSTRG.142932"; transcript_id "MSTRG.142932.1"; exon_number "1"; scaffold_975 StringTie exon 257878 257932 1000 + . gene_id "MSTRG.142953"; transcript_id "MSTRG.142953.1"; exon_number "1"; scaffold_975 StringTie exon 258210 258539 1000 + . gene_id "MSTRG.142953"; transcript_id "MSTRG.142953.1"; exon_number "2"; scaffold_975 StringTie exon 296664 296899 1000 + . gene_id "MSTRG.142956"; transcript_id "MSTRG.142956.1"; exon_number "1"; scaffold_975 StringTie exon 297053 297289 1000 + . gene_id "MSTRG.142956"; transcript_id "MSTRG.142956.1"; exon_number "2"; scaffold_975 StringTie exon 297461 297919 1000 + . gene_id "MSTRG.142956"; transcript_id "MSTRG.142956.1"; exon_number "3"; scaffold_975 StringTie exon 370558 370708 1000 - . gene_id "MSTRG.142967"; transcript_id "MSTRG.142967.1"; exon_number "1"; scaffold_975 StringTie exon 371029 371296 1000 - . gene_id "MSTRG.142967"; transcript_id "MSTRG.142967.1"; exon_number "2"; scaffold_9755 StringTie exon 30 397 1000 . . gene_id "MSTRG.142975"; transcript_id "MSTRG.142975.1"; exon_number "1"; scaffold_976 StringTie exon 256407 256816 1000 . . gene_id "MSTRG.143001"; transcript_id "MSTRG.143001.1"; exon_number "1"; scaffold_976 StringTie exon 268301 268552 1000 . . gene_id "MSTRG.143002"; transcript_id "MSTRG.143002.1"; exon_number "1"; scaffold_976 StringTie exon 296954 297182 1000 . . gene_id "MSTRG.143005"; transcript_id "MSTRG.143005.1"; exon_number "1"; scaffold_9763 StringTie exon 15453 15867 1000 - . gene_id "MSTRG.143013"; transcript_id "MSTRG.143013.1"; exon_number "1"; scaffold_9763 StringTie exon 17503 17613 1000 - . gene_id "MSTRG.143013"; transcript_id "MSTRG.143013.1"; exon_number "2"; scaffold_9763 StringTie exon 18566 18615 1000 - . gene_id "MSTRG.143013"; transcript_id "MSTRG.143013.1"; exon_number "3"; scaffold_9767 StringTie exon 7457 7733 1000 . . gene_id "MSTRG.143022"; transcript_id "MSTRG.143022.1"; exon_number "1"; scaffold_9771 StringTie exon 20450 20757 1000 . . gene_id "MSTRG.143054"; transcript_id "MSTRG.143054.1"; exon_number "1"; scaffold_9776 StringTie exon 17302 17534 1000 - . gene_id "MSTRG.143059"; transcript_id "MSTRG.143059.1"; exon_number "1"; scaffold_9776 StringTie exon 17756 17862 1000 - . gene_id "MSTRG.143059"; transcript_id "MSTRG.143059.1"; exon_number "2"; scaffold_9776 StringTie exon 18077 18138 1000 - . gene_id "MSTRG.143059"; transcript_id "MSTRG.143059.1"; exon_number "3"; scaffold_9776 StringTie exon 18296 18362 1000 - . gene_id "MSTRG.143059"; transcript_id "MSTRG.143059.1"; exon_number "4"; scaffold_9776 StringTie exon 19134 19219 1000 - . gene_id "MSTRG.143059"; transcript_id "MSTRG.143059.1"; exon_number "5"; scaffold_9776 StringTie exon 19796 19923 1000 - . gene_id "MSTRG.143059"; transcript_id "MSTRG.143059.1"; exon_number "6"; scaffold_9777 StringTie exon 3139 3418 1000 . . gene_id "MSTRG.143061"; transcript_id "MSTRG.143061.1"; exon_number "1"; scaffold_9788 StringTie exon 14262 14565 1000 . . gene_id "MSTRG.143092"; transcript_id "MSTRG.143092.1"; exon_number "1"; scaffold_979 StringTie exon 45132 45350 1000 - . gene_id "MSTRG.143099"; transcript_id "MSTRG.143099.2"; exon_number "1"; scaffold_979 StringTie exon 46594 46735 1000 - . gene_id "MSTRG.143099"; transcript_id "MSTRG.143099.2"; exon_number "2"; scaffold_979 StringTie exon 49750 49917 1000 - . gene_id "MSTRG.143099"; transcript_id "MSTRG.143099.2"; exon_number "3"; scaffold_979 StringTie exon 50147 50255 1000 - . gene_id "MSTRG.143099"; transcript_id "MSTRG.143099.2"; exon_number "4"; scaffold_979 StringTie exon 50424 50611 1000 - . gene_id "MSTRG.143099"; transcript_id "MSTRG.143099.2"; exon_number "5"; scaffold_979 StringTie exon 51270 51382 1000 - . gene_id "MSTRG.143099"; transcript_id "MSTRG.143099.2"; exon_number "6"; scaffold_979 StringTie exon 96098 96515 1000 . . gene_id "MSTRG.143106"; transcript_id "MSTRG.143106.1"; exon_number "1"; scaffold_979 StringTie exon 334908 335511 1000 . . gene_id "MSTRG.143125"; transcript_id "MSTRG.143125.1"; exon_number "1"; scaffold_979 StringTie exon 388934 389159 1000 . . gene_id "MSTRG.143131"; transcript_id "MSTRG.143131.1"; exon_number "1"; scaffold_9790 StringTie exon 15712 16046 1000 . . gene_id "MSTRG.143132"; transcript_id "MSTRG.143132.1"; exon_number "1"; scaffold_9793 StringTie exon 9796 10066 1000 . . gene_id "MSTRG.143142"; transcript_id "MSTRG.143142.1"; exon_number "1"; scaffold_9794 StringTie exon 19393 19623 1000 . . gene_id "MSTRG.143145"; transcript_id "MSTRG.143145.1"; exon_number "1"; scaffold_9796 StringTie exon 13471 13707 1000 . . gene_id "MSTRG.143152"; transcript_id "MSTRG.143152.1"; exon_number "1"; scaffold_9797 StringTie exon 10859 11131 1000 . . gene_id "MSTRG.143153"; transcript_id "MSTRG.143153.1"; exon_number "1"; scaffold_98 StringTie exon 292440 292681 1000 . . gene_id "MSTRG.143173"; transcript_id "MSTRG.143173.1"; exon_number "1"; scaffold_98 StringTie exon 336969 337182 1000 . . gene_id "MSTRG.143174"; transcript_id "MSTRG.143174.1"; exon_number "1"; scaffold_98 StringTie exon 1040653 1040893 1000 . . gene_id "MSTRG.143213"; transcript_id "MSTRG.143213.1"; exon_number "1"; scaffold_98 StringTie exon 1042188 1042456 1000 . . gene_id "MSTRG.143214"; transcript_id "MSTRG.143214.1"; exon_number "1"; scaffold_98 StringTie exon 1295745 1295968 1000 . . gene_id "MSTRG.143228"; transcript_id "MSTRG.143228.1"; exon_number "1"; scaffold_98 StringTie exon 1593043 1593456 1000 . . gene_id "MSTRG.143241"; transcript_id "MSTRG.143241.1"; exon_number "1"; scaffold_98 StringTie exon 1686249 1686380 1000 + . gene_id "MSTRG.143253"; transcript_id "MSTRG.143253.3"; exon_number "1"; scaffold_98 StringTie exon 1688009 1688515 1000 + . gene_id "MSTRG.143253"; transcript_id "MSTRG.143253.3"; exon_number "2"; scaffold_980 StringTie exon 33141 33969 1000 . . gene_id "MSTRG.143264"; transcript_id "MSTRG.143264.1"; exon_number "1"; scaffold_980 StringTie exon 216591 216811 1000 . . gene_id "MSTRG.143283"; transcript_id "MSTRG.143283.1"; exon_number "1"; scaffold_980 StringTie exon 317393 317629 1000 . . gene_id "MSTRG.143286"; transcript_id "MSTRG.143286.1"; exon_number "1"; scaffold_980 StringTie exon 372791 373324 1000 . . gene_id "MSTRG.143291"; transcript_id "MSTRG.143291.1"; exon_number "1"; scaffold_9801 StringTie exon 18578 18794 1000 . . gene_id "MSTRG.143294"; transcript_id "MSTRG.143294.1"; exon_number "1"; scaffold_9809 StringTie exon 6460 6541 1000 + . gene_id "MSTRG.143311"; transcript_id "MSTRG.143311.1"; exon_number "1"; scaffold_9809 StringTie exon 6876 6986 1000 + . gene_id "MSTRG.143311"; transcript_id "MSTRG.143311.1"; exon_number "2"; scaffold_9809 StringTie exon 7872 7904 1000 + . gene_id "MSTRG.143311"; transcript_id "MSTRG.143311.1"; exon_number "3"; scaffold_9809 StringTie exon 8027 8059 1000 + . gene_id "MSTRG.143311"; transcript_id "MSTRG.143311.1"; exon_number "4"; scaffold_9809 StringTie exon 8380 8390 1000 + . gene_id "MSTRG.143311"; transcript_id "MSTRG.143311.1"; exon_number "5"; scaffold_9809 StringTie exon 14938 15186 1000 . . gene_id "MSTRG.143313"; transcript_id "MSTRG.143313.1"; exon_number "1"; scaffold_981 StringTie exon 4035 4175 1000 - . gene_id "MSTRG.143318"; transcript_id "MSTRG.143318.1"; exon_number "1"; scaffold_981 StringTie exon 5079 5253 1000 - . gene_id "MSTRG.143318"; transcript_id "MSTRG.143318.1"; exon_number "2"; scaffold_981 StringTie exon 5748 5854 1000 - . gene_id "MSTRG.143318"; transcript_id "MSTRG.143318.1"; exon_number "3"; scaffold_981 StringTie exon 75833 76309 1000 . . gene_id "MSTRG.143324"; transcript_id "MSTRG.143324.1"; exon_number "1"; scaffold_981 StringTie exon 199737 200410 1000 . . gene_id "MSTRG.143330"; transcript_id "MSTRG.143330.1"; exon_number "1"; scaffold_982 StringTie exon 4921 6380 1000 + . gene_id "MSTRG.143357"; transcript_id "MSTRG.143357.1"; exon_number "1"; scaffold_982 StringTie exon 64134 64144 1000 + . gene_id "MSTRG.143357"; transcript_id "MSTRG.143357.1"; exon_number "2"; scaffold_982 StringTie exon 14486 14712 1000 - . gene_id "MSTRG.143358"; transcript_id "MSTRG.143358.1"; exon_number "1"; scaffold_982 StringTie exon 18145 18275 1000 - . gene_id "MSTRG.143358"; transcript_id "MSTRG.143358.1"; exon_number "2"; scaffold_982 StringTie exon 18508 18707 1000 - . gene_id "MSTRG.143358"; transcript_id "MSTRG.143358.1"; exon_number "3"; scaffold_982 StringTie exon 43920 44234 1000 . . gene_id "MSTRG.143364"; transcript_id "MSTRG.143364.1"; exon_number "1"; scaffold_982 StringTie exon 45253 45550 1000 - . gene_id "MSTRG.143365"; transcript_id "MSTRG.143365.1"; exon_number "1"; scaffold_982 StringTie exon 46370 46434 1000 - . gene_id "MSTRG.143365"; transcript_id "MSTRG.143365.1"; exon_number "2"; scaffold_982 StringTie exon 47792 47932 1000 - . gene_id "MSTRG.143365"; transcript_id "MSTRG.143365.1"; exon_number "3"; scaffold_982 StringTie exon 49633 49719 1000 - . gene_id "MSTRG.143365"; transcript_id "MSTRG.143365.1"; exon_number "4"; scaffold_982 StringTie exon 51937 52018 1000 - . gene_id "MSTRG.143365"; transcript_id "MSTRG.143365.1"; exon_number "5"; scaffold_982 StringTie exon 52153 52254 1000 - . gene_id "MSTRG.143365"; transcript_id "MSTRG.143365.1"; exon_number "6"; scaffold_982 StringTie exon 52395 52497 1000 - . gene_id "MSTRG.143365"; transcript_id "MSTRG.143365.1"; exon_number "7"; scaffold_982 StringTie exon 53160 53189 1000 - . gene_id "MSTRG.143365"; transcript_id "MSTRG.143365.1"; exon_number "8"; scaffold_982 StringTie exon 137719 138039 1000 . . gene_id "MSTRG.143370"; transcript_id "MSTRG.143370.1"; exon_number "1"; scaffold_983 StringTie exon 255379 255390 1000 - . gene_id "MSTRG.143432"; transcript_id "MSTRG.143432.1"; exon_number "1"; scaffold_983 StringTie exon 255954 256065 1000 - . gene_id "MSTRG.143432"; transcript_id "MSTRG.143432.1"; exon_number "2"; scaffold_983 StringTie exon 256716 256846 1000 - . gene_id "MSTRG.143432"; transcript_id "MSTRG.143432.1"; exon_number "3"; scaffold_983 StringTie exon 340780 341034 1000 . . gene_id "MSTRG.143440"; transcript_id "MSTRG.143440.1"; exon_number "1"; scaffold_9831 StringTie exon 5227 5304 1000 + . gene_id "MSTRG.143451"; transcript_id "MSTRG.143451.1"; exon_number "1"; scaffold_9831 StringTie exon 5549 5941 1000 + . gene_id "MSTRG.143451"; transcript_id "MSTRG.143451.1"; exon_number "2"; scaffold_984 StringTie exon 104993 105578 1000 . . gene_id "MSTRG.143481"; transcript_id "MSTRG.143481.1"; exon_number "1"; scaffold_984 StringTie exon 261860 263286 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "1"; scaffold_984 StringTie exon 271122 271173 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "2"; scaffold_984 StringTie exon 271280 271315 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "3"; scaffold_984 StringTie exon 271432 271479 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "4"; scaffold_984 StringTie exon 271637 271688 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "5"; scaffold_984 StringTie exon 271912 271977 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "6"; scaffold_984 StringTie exon 272102 272205 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "7"; scaffold_984 StringTie exon 272366 272422 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "8"; scaffold_984 StringTie exon 272548 272634 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "9"; scaffold_984 StringTie exon 273920 273980 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "10"; scaffold_984 StringTie exon 274090 274273 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "11"; scaffold_984 StringTie exon 274517 274622 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "12"; scaffold_984 StringTie exon 290603 290635 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "13"; scaffold_984 StringTie exon 293511 293594 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "14"; scaffold_984 StringTie exon 308793 309016 1000 - . gene_id "MSTRG.143490"; transcript_id "MSTRG.143490.1"; exon_number "15"; scaffold_9842 StringTie exon 4137 4257 1000 + . gene_id "MSTRG.143502"; transcript_id "MSTRG.143502.1"; exon_number "1"; scaffold_9842 StringTie exon 4920 4963 1000 + . gene_id "MSTRG.143502"; transcript_id "MSTRG.143502.1"; exon_number "2"; scaffold_9842 StringTie exon 5054 5281 1000 + . gene_id "MSTRG.143502"; transcript_id "MSTRG.143502.1"; exon_number "3"; scaffold_9843 StringTie exon 14395 14805 1000 . . gene_id "MSTRG.143504"; transcript_id "MSTRG.143504.1"; exon_number "1"; scaffold_9845 StringTie exon 4451 4500 1000 + . gene_id "MSTRG.143506"; transcript_id "MSTRG.143506.1"; exon_number "1"; scaffold_9845 StringTie exon 4623 4825 1000 + . gene_id "MSTRG.143506"; transcript_id "MSTRG.143506.1"; exon_number "2"; scaffold_9845 StringTie exon 5101 5323 1000 + . gene_id "MSTRG.143506"; transcript_id "MSTRG.143506.1"; exon_number "3"; scaffold_9845 StringTie exon 5690 5729 1000 + . gene_id "MSTRG.143506"; transcript_id "MSTRG.143506.1"; exon_number "4"; scaffold_985 StringTie exon 234032 234262 1000 - . gene_id "MSTRG.143536"; transcript_id "MSTRG.143536.2"; exon_number "1"; scaffold_985 StringTie exon 250063 250416 1000 - . gene_id "MSTRG.143536"; transcript_id "MSTRG.143536.2"; exon_number "2"; scaffold_985 StringTie exon 242355 242544 1000 - . gene_id "MSTRG.143540"; transcript_id "MSTRG.143540.1"; exon_number "1"; scaffold_985 StringTie exon 246613 246700 1000 - . gene_id "MSTRG.143540"; transcript_id "MSTRG.143540.1"; exon_number "2"; scaffold_985 StringTie exon 263591 263826 1000 - . gene_id "MSTRG.143540"; transcript_id "MSTRG.143540.1"; exon_number "3"; scaffold_9854 StringTie exon 9515 9831 1000 . . gene_id "MSTRG.143558"; transcript_id "MSTRG.143558.1"; exon_number "1"; scaffold_9855 StringTie exon 9744 9951 1000 . . gene_id "MSTRG.143559"; transcript_id "MSTRG.143559.1"; exon_number "1"; scaffold_986 StringTie exon 73966 74213 1000 . . gene_id "MSTRG.143575"; transcript_id "MSTRG.143575.1"; exon_number "1"; scaffold_986 StringTie exon 82997 83296 1000 . . gene_id "MSTRG.143577"; transcript_id "MSTRG.143577.1"; exon_number "1"; scaffold_986 StringTie exon 186074 186162 1000 + . gene_id "MSTRG.143593"; transcript_id "MSTRG.143593.1"; exon_number "1"; scaffold_986 StringTie exon 193292 193464 1000 + . gene_id "MSTRG.143593"; transcript_id "MSTRG.143593.1"; exon_number "2"; scaffold_986 StringTie exon 193700 194042 1000 + . gene_id "MSTRG.143593"; transcript_id "MSTRG.143593.1"; exon_number "3"; scaffold_986 StringTie exon 194315 194386 1000 + . gene_id "MSTRG.143593"; transcript_id "MSTRG.143593.1"; exon_number "4"; scaffold_986 StringTie exon 186112 186162 1000 + . gene_id "MSTRG.143593"; transcript_id "MSTRG.143593.2"; exon_number "1"; scaffold_986 StringTie exon 193292 193464 1000 + . gene_id "MSTRG.143593"; transcript_id "MSTRG.143593.2"; exon_number "2"; scaffold_986 StringTie exon 193700 194408 1000 + . gene_id "MSTRG.143593"; transcript_id "MSTRG.143593.2"; exon_number "3"; scaffold_9862 StringTie exon 8518 8756 1000 . . gene_id "MSTRG.143613"; transcript_id "MSTRG.143613.1"; exon_number "1"; scaffold_9864 StringTie exon 14656 14920 1000 . . gene_id "MSTRG.143618"; transcript_id "MSTRG.143618.1"; exon_number "1"; scaffold_987 StringTie exon 208167 208292 1000 - . gene_id "MSTRG.143645"; transcript_id "MSTRG.143645.1"; exon_number "1"; scaffold_987 StringTie exon 208481 208571 1000 - . gene_id "MSTRG.143645"; transcript_id "MSTRG.143645.1"; exon_number "2"; scaffold_987 StringTie exon 208660 208758 1000 - . gene_id "MSTRG.143645"; transcript_id "MSTRG.143645.1"; exon_number "3"; scaffold_987 StringTie exon 209382 209460 1000 - . gene_id "MSTRG.143645"; transcript_id "MSTRG.143645.1"; exon_number "4"; scaffold_9871 StringTie exon 8174 8278 1000 + . gene_id "MSTRG.143674"; transcript_id "MSTRG.143674.1"; exon_number "1"; scaffold_9871 StringTie exon 8311 8929 1000 + . gene_id "MSTRG.143674"; transcript_id "MSTRG.143674.1"; exon_number "2"; scaffold_988 StringTie exon 121367 121596 1000 . . gene_id "MSTRG.143694"; transcript_id "MSTRG.143694.1"; exon_number "1"; scaffold_9885 StringTie exon 32 411 1000 . . gene_id "MSTRG.143719"; transcript_id "MSTRG.143719.1"; exon_number "1"; scaffold_9888 StringTie exon 3853 4095 1000 . . gene_id "MSTRG.143724"; transcript_id "MSTRG.143724.1"; exon_number "1"; scaffold_989 StringTie exon 203493 204186 1000 . . gene_id "MSTRG.143744"; transcript_id "MSTRG.143744.1"; exon_number "1"; scaffold_989 StringTie exon 363468 363704 1000 . . gene_id "MSTRG.143759"; transcript_id "MSTRG.143759.1"; exon_number "1"; scaffold_989 StringTie exon 372903 372942 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "1"; scaffold_989 StringTie exon 373182 373284 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "2"; scaffold_989 StringTie exon 374431 374492 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "3"; scaffold_989 StringTie exon 374997 375074 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "4"; scaffold_989 StringTie exon 375635 375749 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "5"; scaffold_989 StringTie exon 376840 376904 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "6"; scaffold_989 StringTie exon 377054 377107 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "7"; scaffold_989 StringTie exon 377228 377356 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "8"; scaffold_989 StringTie exon 378443 378590 1000 - . gene_id "MSTRG.143763"; transcript_id "MSTRG.143763.1"; exon_number "9"; scaffold_99 StringTie exon 282765 282825 1000 + . gene_id "MSTRG.143819"; transcript_id "MSTRG.143819.1"; exon_number "1"; scaffold_99 StringTie exon 283099 283321 1000 + . gene_id "MSTRG.143819"; transcript_id "MSTRG.143819.1"; exon_number "2"; scaffold_99 StringTie exon 283627 283645 1000 + . gene_id "MSTRG.143819"; transcript_id "MSTRG.143819.1"; exon_number "3"; scaffold_99 StringTie exon 283798 283910 1000 + . gene_id "MSTRG.143819"; transcript_id "MSTRG.143819.1"; exon_number "4"; scaffold_99 StringTie exon 284033 284087 1000 + . gene_id "MSTRG.143819"; transcript_id "MSTRG.143819.1"; exon_number "5"; scaffold_99 StringTie exon 284495 284612 1000 + . gene_id "MSTRG.143819"; transcript_id "MSTRG.143819.1"; exon_number "6"; scaffold_99 StringTie exon 284756 284868 1000 + . gene_id "MSTRG.143819"; transcript_id "MSTRG.143819.1"; exon_number "7"; scaffold_99 StringTie exon 877043 877248 1000 . . gene_id "MSTRG.143850"; transcript_id "MSTRG.143850.1"; exon_number "1"; scaffold_99 StringTie exon 927193 927414 1000 . . gene_id "MSTRG.143854"; transcript_id "MSTRG.143854.1"; exon_number "1"; scaffold_99 StringTie exon 1258331 1258395 1000 + . gene_id "MSTRG.143868"; transcript_id "MSTRG.143868.1"; exon_number "1"; scaffold_99 StringTie exon 1258592 1258687 1000 + . gene_id "MSTRG.143868"; transcript_id "MSTRG.143868.1"; exon_number "2"; scaffold_99 StringTie exon 1258927 1259042 1000 + . gene_id "MSTRG.143868"; transcript_id "MSTRG.143868.1"; exon_number "3"; scaffold_99 StringTie exon 1259223 1259247 1000 + . gene_id "MSTRG.143868"; transcript_id "MSTRG.143868.1"; exon_number "4"; scaffold_99 StringTie exon 1352197 1352526 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "1"; scaffold_99 StringTie exon 1352949 1353071 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "2"; scaffold_99 StringTie exon 1353220 1353387 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "3"; scaffold_99 StringTie exon 1353583 1353713 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "4"; scaffold_99 StringTie exon 1353876 1354045 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "5"; scaffold_99 StringTie exon 1354139 1354208 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "6"; scaffold_99 StringTie exon 1354565 1354740 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "7"; scaffold_99 StringTie exon 1354845 1354968 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "8"; scaffold_99 StringTie exon 1355497 1355695 1000 - . gene_id "MSTRG.143884"; transcript_id "MSTRG.143884.1"; exon_number "9"; scaffold_99 StringTie exon 1413439 1413578 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "1"; scaffold_99 StringTie exon 1413677 1413734 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "2"; scaffold_99 StringTie exon 1413869 1413962 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "3"; scaffold_99 StringTie exon 1414076 1414129 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "4"; scaffold_99 StringTie exon 1414337 1414420 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "5"; scaffold_99 StringTie exon 1414545 1414786 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "6"; scaffold_99 StringTie exon 1415767 1415833 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "7"; scaffold_99 StringTie exon 1417124 1417294 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "8"; scaffold_99 StringTie exon 1417398 1417498 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "9"; scaffold_99 StringTie exon 1417600 1417660 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "10"; scaffold_99 StringTie exon 1418113 1418289 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "11"; scaffold_99 StringTie exon 1418404 1418499 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "12"; scaffold_99 StringTie exon 1418667 1419401 1000 + . gene_id "MSTRG.143888"; transcript_id "MSTRG.143888.1"; exon_number "13"; scaffold_99 StringTie exon 1558988 1559266 1000 . . gene_id "MSTRG.143907"; transcript_id "MSTRG.143907.1"; exon_number "1"; scaffold_990 StringTie exon 2285 2546 1000 . . gene_id "MSTRG.143922"; transcript_id "MSTRG.143922.1"; exon_number "1"; scaffold_990 StringTie exon 273540 273742 1000 . . gene_id "MSTRG.143957"; transcript_id "MSTRG.143957.1"; exon_number "1"; scaffold_990 StringTie exon 305741 305854 1000 - . gene_id "MSTRG.143960"; transcript_id "MSTRG.143960.1"; exon_number "1"; scaffold_990 StringTie exon 306086 306260 1000 - . gene_id "MSTRG.143960"; transcript_id "MSTRG.143960.1"; exon_number "2"; scaffold_990 StringTie exon 307038 307179 1000 - . gene_id "MSTRG.143960"; transcript_id "MSTRG.143960.1"; exon_number "3"; scaffold_990 StringTie exon 321680 321885 1000 . . gene_id "MSTRG.143963"; transcript_id "MSTRG.143963.1"; exon_number "1"; scaffold_990 StringTie exon 384979 385229 1000 + . gene_id "MSTRG.143971"; transcript_id "MSTRG.143971.1"; exon_number "1"; scaffold_990 StringTie exon 385435 385632 1000 + . gene_id "MSTRG.143971"; transcript_id "MSTRG.143971.1"; exon_number "2"; scaffold_9907 StringTie exon 8711 8989 1000 . . gene_id "MSTRG.143986"; transcript_id "MSTRG.143986.1"; exon_number "1"; scaffold_991 StringTie exon 194797 195006 1000 . . gene_id "MSTRG.144007"; transcript_id "MSTRG.144007.1"; exon_number "1"; scaffold_991 StringTie exon 347196 347402 1000 . . gene_id "MSTRG.144017"; transcript_id "MSTRG.144017.1"; exon_number "1"; scaffold_9910 StringTie exon 1850 2100 1000 . . gene_id "MSTRG.144024"; transcript_id "MSTRG.144024.1"; exon_number "1"; scaffold_9917 StringTie exon 5621 5841 1000 . . gene_id "MSTRG.144030"; transcript_id "MSTRG.144030.1"; exon_number "1"; scaffold_992 StringTie exon 3361 3455 1000 + . gene_id "MSTRG.144033"; transcript_id "MSTRG.144033.1"; exon_number "1"; scaffold_992 StringTie exon 5681 5814 1000 + . gene_id "MSTRG.144033"; transcript_id "MSTRG.144033.1"; exon_number "2"; scaffold_992 StringTie exon 58527 58753 1000 . . gene_id "MSTRG.144041"; transcript_id "MSTRG.144041.1"; exon_number "1"; scaffold_9928 StringTie exon 20904 21235 1000 . . gene_id "MSTRG.144087"; transcript_id "MSTRG.144087.1"; exon_number "1"; scaffold_9933 StringTie exon 17982 18293 1000 . . gene_id "MSTRG.144118"; transcript_id "MSTRG.144118.1"; exon_number "1"; scaffold_994 StringTie exon 199881 200002 1000 - . gene_id "MSTRG.144145"; transcript_id "MSTRG.144145.1"; exon_number "1"; scaffold_994 StringTie exon 200204 200673 1000 - . gene_id "MSTRG.144145"; transcript_id "MSTRG.144145.1"; exon_number "2"; scaffold_994 StringTie exon 209329 209953 1000 . . gene_id "MSTRG.144149"; transcript_id "MSTRG.144149.1"; exon_number "1"; scaffold_994 StringTie exon 304697 304981 1000 . . gene_id "MSTRG.144154"; transcript_id "MSTRG.144154.1"; exon_number "1"; scaffold_994 StringTie exon 321413 321555 1000 + . gene_id "MSTRG.144157"; transcript_id "MSTRG.144157.1"; exon_number "1"; scaffold_994 StringTie exon 321692 321765 1000 + . gene_id "MSTRG.144157"; transcript_id "MSTRG.144157.1"; exon_number "2"; scaffold_994 StringTie exon 321917 321993 1000 + . gene_id "MSTRG.144157"; transcript_id "MSTRG.144157.1"; exon_number "3"; scaffold_9944 StringTie exon 22229 22600 1000 . . gene_id "MSTRG.144170"; transcript_id "MSTRG.144170.1"; exon_number "1"; scaffold_995 StringTie exon 46779 46995 1000 . . gene_id "MSTRG.144184"; transcript_id "MSTRG.144184.1"; exon_number "1"; scaffold_995 StringTie exon 162721 162848 1000 - . gene_id "MSTRG.144190"; transcript_id "MSTRG.144190.1"; exon_number "1"; scaffold_995 StringTie exon 162951 163063 1000 - . gene_id "MSTRG.144190"; transcript_id "MSTRG.144190.1"; exon_number "2"; scaffold_995 StringTie exon 388351 388580 1000 . . gene_id "MSTRG.144211"; transcript_id "MSTRG.144211.1"; exon_number "1"; scaffold_9954 StringTie exon 8258 8430 1000 - . gene_id "MSTRG.144230"; transcript_id "MSTRG.144230.2"; exon_number "1"; scaffold_9954 StringTie exon 9170 9321 1000 - . gene_id "MSTRG.144230"; transcript_id "MSTRG.144230.2"; exon_number "2"; scaffold_9955 StringTie exon 3405 3690 1000 . . gene_id "MSTRG.144235"; transcript_id "MSTRG.144235.1"; exon_number "1"; scaffold_996 StringTie exon 39078 39103 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "1"; scaffold_996 StringTie exon 40466 40762 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "2"; scaffold_996 StringTie exon 40959 41223 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "3"; scaffold_996 StringTie exon 60255 60358 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "4"; scaffold_996 StringTie exon 61649 61816 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "5"; scaffold_996 StringTie exon 62019 62187 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "6"; scaffold_996 StringTie exon 62417 62476 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "7"; scaffold_996 StringTie exon 62684 62754 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "8"; scaffold_996 StringTie exon 63333 63383 1000 + . gene_id "MSTRG.144242"; transcript_id "MSTRG.144242.1"; exon_number "9"; scaffold_9960 StringTie exon 1407 1818 1000 . . gene_id "MSTRG.144265"; transcript_id "MSTRG.144265.1"; exon_number "1"; scaffold_9966 StringTie exon 17512 17734 1000 . . gene_id "MSTRG.144278"; transcript_id "MSTRG.144278.1"; exon_number "1"; scaffold_9968 StringTie exon 760 1295 1000 + . gene_id "MSTRG.144280"; transcript_id "MSTRG.144280.1"; exon_number "1"; scaffold_9968 StringTie exon 2372 2540 1000 + . gene_id "MSTRG.144280"; transcript_id "MSTRG.144280.1"; exon_number "2"; scaffold_997 StringTie exon 54517 55658 1000 . . gene_id "MSTRG.144285"; transcript_id "MSTRG.144285.1"; exon_number "1"; scaffold_997 StringTie exon 67886 68120 1000 . . gene_id "MSTRG.144288"; transcript_id "MSTRG.144288.1"; exon_number "1"; scaffold_997 StringTie exon 382153 382413 1000 . . gene_id "MSTRG.144326"; transcript_id "MSTRG.144326.1"; exon_number "1"; scaffold_9972 StringTie exon 11943 12186 1000 . . gene_id "MSTRG.144332"; transcript_id "MSTRG.144332.1"; exon_number "1"; scaffold_9978 StringTie exon 20113 20312 1000 . . gene_id "MSTRG.144342"; transcript_id "MSTRG.144342.1"; exon_number "1"; scaffold_998 StringTie exon 32831 33608 1000 . . gene_id "MSTRG.144347"; transcript_id "MSTRG.144347.1"; exon_number "1"; scaffold_9980 StringTie exon 3481 3872 1000 + . gene_id "MSTRG.144382"; transcript_id "MSTRG.144382.1"; exon_number "1"; scaffold_9980 StringTie exon 6060 6168 1000 + . gene_id "MSTRG.144382"; transcript_id "MSTRG.144382.1"; exon_number "2"; scaffold_9982 StringTie exon 18188 18555 1000 . . gene_id "MSTRG.144386"; transcript_id "MSTRG.144386.1"; exon_number "1"; scaffold_9983 StringTie exon 16015 16228 1000 . . gene_id "MSTRG.144388"; transcript_id "MSTRG.144388.1"; exon_number "1"; scaffold_9985 StringTie exon 13916 14033 1000 + . gene_id "MSTRG.144392"; transcript_id "MSTRG.144392.1"; exon_number "1"; scaffold_9985 StringTie exon 15273 15504 1000 + . gene_id "MSTRG.144392"; transcript_id "MSTRG.144392.1"; exon_number "2"; scaffold_9985 StringTie exon 15821 15888 1000 + . gene_id "MSTRG.144392"; transcript_id "MSTRG.144392.1"; exon_number "3"; scaffold_9985 StringTie exon 15998 16075 1000 + . gene_id "MSTRG.144392"; transcript_id "MSTRG.144392.1"; exon_number "4"; scaffold_9985 StringTie exon 16343 16402 1000 + . gene_id "MSTRG.144392"; transcript_id "MSTRG.144392.1"; exon_number "5"; scaffold_9985 StringTie exon 17115 17249 1000 + . gene_id "MSTRG.144392"; transcript_id "MSTRG.144392.1"; exon_number "6"; scaffold_9985 StringTie exon 17341 17526 1000 + . gene_id "MSTRG.144392"; transcript_id "MSTRG.144392.1"; exon_number "7"; scaffold_9987 StringTie exon 8629 9151 1000 . . gene_id "MSTRG.144398"; transcript_id "MSTRG.144398.1"; exon_number "1"; scaffold_999 StringTie exon 359005 360118 1000 . . gene_id "MSTRG.144421"; transcript_id "MSTRG.144421.1"; exon_number "1"; scaffold_9990 StringTie exon 2046 2279 1000 . . gene_id "MSTRG.144423"; transcript_id "MSTRG.144423.1"; exon_number "1";