XLOC_001015



Basic Information


Item Value
gene id XLOC_001015
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 9138638 ~ 9139160 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00003339
TGTAGACTGGGGAGGTTGCATGTATATGGTATCCCTTAAATGGGTGGAGGACTGTGTGGGCATGACCTGAGGCTGTCGTATGGATTCTTTAATTTGAGCCACCTCTACACTGAGATCCTTCAACATTGCCATGTCAGACCGCATTCCTTTTAACTCACTCAAAAGGCAACATTGACCTTGTCCAATAGAAGTTCATCGCTCACCTCATTTCTTGTGAGGTAAGGTTGCAGGTCACTTCTAATACTATCATTTTGTAAGCCGGTCAGGACAGTGTGGAGAAACATACTCTGAACAAGATTTGGATCATATTTCAAAGTAGATTCTGCCTCCTGGGAAGCAAACAGAATCTTTTGTCTCAAATCAAGACACCGA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00003339 True 372 lncRNA 0.43 2 9138638 9139160

Neighbor


gene id symbol gene type direction distance location
XLOC_001014 palb2 coding downstream 4593 9132335 ~ 9134045 (-)
XLOC_001013 palb2 coding downstream 8502 9125023 ~ 9130136 (-)
XLOC_001012 ndufab1a coding downstream 15173 9118100 ~ 9123465 (-)
XLOC_001011 si:ch211-14k19.8 coding downstream 23604 9100447 ~ 9115034 (-)
XLOC_001010 NA coding downstream 55866 9081842 ~ 9082772 (-)
XLOC_001016 BX004779.2 coding upstream 18150 9157310 ~ 9162637 (-)
XLOC_001017 ern2 coding upstream 30647 9169807 ~ 9195760 (-)
XLOC_001018 BX004779.1 coding upstream 58699 9197859 ~ 9197966 (-)
XLOC_001019 gng13a coding upstream 87921 9227081 ~ 9228007 (-)
XLOC_001020 si:dkeyp-57d7.4 coding upstream 91084 9230244 ~ 9231952 (-)
XLOC_001009 NA non-coding downstream 157967 8978905 ~ 8980671 (-)
XLOC_001008 NA non-coding downstream 160675 8974500 ~ 8977963 (-)
XLOC_001002 NA non-coding downstream 513372 8612575 ~ 8625266 (-)
XLOC_001001 NA non-coding downstream 551279 8579155 ~ 8587359 (-)
XLOC_001023 AL954703.1 non-coding upstream 169111 9308271 ~ 9321931 (-)
XLOC_001024 NA non-coding upstream 281664 9420824 ~ 9422275 (-)
XLOC_001031 NA non-coding upstream 777216 9916376 ~ 9918812 (-)

Expression



Co-expression Network