XLOC_001023 (AL954703.1)


Basic Information

Item Value
gene id XLOC_001023
gene name AL954703.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 9308271 ~ 9321931 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001626
GCTCGtctccaaaaatgctaattgttcCATCAGGCCAGAGTTGTTATTTTTTCTTATATGTTCTAAaattgtgtgtatgcatgtgtgtgtgcttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcttattaGACAATCAGTTTCACCGCCTTGCCAGTCCACTACCCACAATTCCAGTGCTGCACTGGGACTTTCCTGATGAAAGAATTGTTAAATATTCAACGCAGCTCGTTCACAGTCCCTGGAAGATGCATCAGCTCCCATTTAGCACTCGGGTGTTTAGGGAAATACCACCCGAAACCTGGAAACCTTGAGGGACTAAACACAACTGGCAAAGATAACGCGTATATGAAATGTGTGAGtacacgtgtttgtgtgtgtgtgtgtgtgtgtgaaggggtAGTGTGTAGCTGTGTGTGCTGGTTTGATGTCCTTGGTAGGTTGCGCACTAAATGAGCTATGGCTGTTATTACTGTGTGTGTTCACCCGGGCGGCCTGAGCAGAGTTCAACCTGACATTAGTCACGCCTAATACTGCCAACCGCTGGAGAGCCTCGCCTAGAGGTCCAAAACTGCTGCTGCGTTCATATATTAGGATATCGGTGATGGTTAATGATAAAAAAGTAATCATTCTGATGTAATAACTTTGTAAATGTTTCTTAGCTACTGTAGATTTAAGTAATCACCGCTTGTAGGGTTTCACAGGGATgccaaagagataaataaatacatttggttCCATGAGGAACATTTTAGAGAGGAATTCTTTAAAGAACCAAAGTTTTTAGTGCATAGATGATATAcaatttaagtcaaaattatttaacaCCTGTACATGTTttctcaatttttgtttaacgcagaacacatttctaaacataatagttttaagaattcatttttaataaatgatttctttttaCTGGATGTTTTTAtaatactagtattcaacttaagtATAATTTAAAGGCATAATtgtgttaattaggcaagttagggtaactaggcaaatcattgtataatgatggtttgttctgtagacaattgaaaataaatattgcttctggaggctaataatattgaccttaaagtggttataataaataaaaaactgcttttattctagccaaaataaaataaataagactt
>TCONS_00001627
ACGTTTAGCGTTTCATGCGACTGTATGTAATTGACCTAATATGTGTTTAAATTACAAGAGACAGGACTTTGGATCAAATCAGCGCAGCATCCATCAGGACAATCAGTTTCACCGCCTTGCCAGTCCACTACCCACAATTCCAGTGCTGCACTGGGACTTTCCTGATGAAAGAATGTGAGTATGCGGTTGTCTATTAAGATATGTAAATTTGTAATCTCTCAAAGCCCGCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117314

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001626 False 1172 lncRNA 0.37 2 9308271 9314795
TCONS_00001627 True 230 lncRNA 0.42 2 9314508 9321931

Neighbor

gene id symbol gene type direction distance location
XLOC_001022 ubn1 coding downstream 30234 9258931 ~ 9278037 (-)
XLOC_001021 zgc:136472 coding downstream 58328 9234928 ~ 9249943 (-)
XLOC_001020 si:dkeyp-57d7.4 coding downstream 76319 9230244 ~ 9231952 (-)
XLOC_001019 gng13a coding downstream 80264 9227081 ~ 9228007 (-)
XLOC_001018 BX004779.1 coding downstream 110305 9197859 ~ 9197966 (-)
XLOC_001024 NA coding upstream 98893 9420824 ~ 9422275 (-)
XLOC_001025 micall2b coding upstream 137829 9459760 ~ 9486214 (-)
XLOC_001026 si:ch73-12o23.1 coding upstream 177714 9499645 ~ 9527200 (-)
XLOC_001027 ugt5b5 coding upstream 304346 9626277 ~ 9629724 (-)
XLOC_001028 ugt5b2 coding upstream 307230 9629161 ~ 9652725 (-)
XLOC_001016 BX004779.2 non-coding downstream 145634 9157310 ~ 9162637 (-)
XLOC_001015 NA non-coding downstream 169111 9138638 ~ 9139160 (-)
XLOC_001010 NA non-coding downstream 225499 9081842 ~ 9082772 (-)
XLOC_001009 NA non-coding downstream 327600 8978905 ~ 8980671 (-)
XLOC_001031 NA non-coding upstream 594445 9916376 ~ 9918812 (-)
XLOC_001037 CR854964.1 non-coding upstream 948316 10270247 ~ 10272725 (-)
XLOC_001044 NA non-coding upstream 1349921 10671852 ~ 10682149 (-)
XLOC_001045 NA non-coding upstream 1417234 10739165 ~ 10740441 (-)

Expression


Co-expression Network