CI01000063_05189361_05189645 (CRIPT)


Basic Information

Item Value
gene id CI01000063_05189361_05189645
gene name CRIPT
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5188403 ~ 5189645 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_05189361_05189645.mRNA
GTTTGATCCTTATGGGAAATCTGGATTTGCCACTTGCAGAATATGCAAAAGCTCTGTCCATCAGTCTGGTTCACACTACTGCCAGGGATGTGCCTACAAGAAAGGAATTTGTGCCATGTGTGGGAAGAAGGTTCTTGACACCAAGAACTACAAACAGACCTCAGTTTGATTTATTATCTTTTTCTGGAGGTTTTCGTGTTTAGCTGAGAAGGCAATGTTTGTGAATGATTATGTTGACTCTTCCATGTGTTGAGAATGATCATTTAACTTCACAAAAGAGTTTAATTTGCAGTGTTTTGTGTAAAAGTGCTGCCAAAGAAGTGTACTGGATTATGACTGTATTTATTTGAAAATATGTCCATGGTATTTTTCTCTCACTTAACCTTAGAGCAATATATTGGCTTGCACTGTTTGAACAATGTAGATGCCTTCTTTAAGTATATTTGCTGGAGAACATGTTTTGTAAATGTTCTTATTCATTTTTTTAGTAAATAATTTATCATTTTTAATACTACCAAGCATAATGAAAAAAATCAGTTCTCTTCATGATAATTTATTTCTCTTTTTAGGCTTATTAGTCATTGGACCTTATTCAACTTTAGACTTTGACTTTTAAATGTCACCTCTTCCCCAATTAAGAAAAATATAGATATTATCTCTCTTGTTTGAAGTTATATTTTTTTCTATCGTTTCCAAGGCAGTGTCACTACAGCAGATTCTAATGTAAATATGAAACAAGTAGACAGTGACCTGCCAATATAAGACCGCTACAAGCTCAGTGTACAGTGATGTTTATAGCCTGTTTCCACTTCTTACTGTCCCGCCATTGGTTCTTTTTGTGAACACTGTTGCAGATGTTTTCTGGAAATCTGTTTGTCGTTTCCTTTTTCAGTTATCATTTGAAATTATATAGTTTTGGATTTCTTTTAGATGTCTCTTGAACCCACCCAGACCGTTGCGGATTTTCTTACAGTCTGTTTGATTGTTTTGCCATATTTTTAAGTGCAAGAAGGCACAACATAGCAATACTTAGATACTGTATAATATCATTCCCTTAAGATCAAATAAA

Function

symbol description
cript Predicted to enable PDZ domain binding activity and microtubule binding activity. Predicted to be involved in cytoplasmic microtubule organization. Predicted to be located in cytoplasm. Predicted to be active in dendrite. Orthologous to human CRIPT (CXXC repeat containing interactor of PDZ3 domain).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_05189361_05189645.mRNA False 1069 mRNA 0.34 2 5188495 5189645

Neighbor

gene id symbol gene type direction distance location
CI01000063_05160162_05161742 SOCS5A coding downstream 25219 5158567 ~ 5163276 (-)
CI01000063_05085075_05095432 MSH2 coding downstream 92968 5084268 ~ 5095527 (-)
CI01000063_05070661_05081280 FBXO11A, FBXO11B, FBXO11 coding downstream 107215 5070423 ~ 5081280 (-)
CI01000063_05056169_05057789 FOXN2B, FOXN2 coding downstream 130640 5056169 ~ 5057855 (-)
CI01000063_04834309_04848552 NA coding downstream 339775 4834047 ~ 4848720 (-)
CI01000063_05198199_05217488 RHOQ coding upstream 8521 5198166 ~ 5217644 (-)
CI01000063_05248902_05250362 NA coding upstream 59052 5248697 ~ 5250625 (-)
CI01000063_05252331_05253850 COX7A3 coding upstream 62249 5250005 ~ 5253940 (-)
CI01000063_05257128_05262520 KCNG3 coding upstream 67313 5256958 ~ 5263331 (-)
CI01000063_05304502_05306803 HCAR1-4 coding upstream 114794 5304439 ~ 5306803 (-)
G265635 NA non-coding downstream 63012 5125257 ~ 5125483 (-)
G265564 NA non-coding downstream 75391 5109364 ~ 5113104 (-)
G265625 NA non-coding downstream 87509 5100356 ~ 5100986 (-)
G265620 NA non-coding downstream 161647 5026267 ~ 5026848 (-)
G265574 NA non-coding downstream 197895 4976411 ~ 4990600 (-)
G265653 NA non-coding upstream 32091 5221736 ~ 5226842 (-)
G265672 NA non-coding upstream 74497 5264142 ~ 5264343 (-)
G265665 NA non-coding upstream 74847 5264492 ~ 5281847 (-)
G265693 NA non-coding upstream 136487 5326132 ~ 5329568 (-)
G265705 NA non-coding upstream 160221 5349866 ~ 5350103 (-)
CI01000063_02725759_02726399 NA other downstream 2461960 2725759 ~ 2726535 (-)
CI01000063_02326799_02327290 CBY1 other downstream 2860776 2326741 ~ 2327309 (-)
CI01000063_02177769_02178239 NA other downstream 3010159 2177747 ~ 2178395 (-)
CI01000063_01669384_01670016 HBAE1 other downstream 3518419 1669317 ~ 1672019 (-)
CI01000063_05616519_05617045 NA other upstream 357056 5615806 ~ 5617112 (-)
G265976 NA other upstream 1098513 6283058 ~ 6290946 (-)
G266797 NA other upstream 2099850 7289495 ~ 7290224 (-)
G266660 NA other upstream 2249440 7439085 ~ 7441435 (-)

Expression


Co-expression Network