CI01000063_05248902_05250362


Basic Information

Item Value
gene id CI01000063_05248902_05250362
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000063
NCBI id null
chromosome length 7808773
location 5248697 ~ 5250625 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000063_05248902_05250362.mRNA
TCAGGCTGTTCACATGGCAACAAGGCTATAGGAGACCTTGTACACAAAAGGACTTCCAAAAAATCCCTTTGAATCTGTCTCTTTTATGACCAAAGCACTGTAGAATTGCGAAGAAACAATTTCTATTGTTTCGAAATCCTATTTTTCCACATTTCTGTATAGTCGGAGGTAATAACACAACATGAGGCTGACAGACTGTCTAACTGCAGACTGGCATTTGATATGCTGTCAGAGCACAAAGCAAAGTGAAACAATCTATGACAATGAGAGGTTGTGATTCACTCGGCATCATCTCTGAGCCGCTCTGCTTACTACTGAAGACTCTGGCAACTGCACGGTTCATTTTAAAGAGGTCAATAATCTCTACCAAGTACAGCTGTTCTAGTAATAGCCTCGTGGAGATGCACTGCTGCTCAAACACTGCTGAGTTCAACCAATCAGAGATTATTGAAAGAGCTCTTCATGAAATCCTTAGGGAAAAATTAGCAAGGGTAAAGCAGACATCATGGGGTGTGCTGTCAGTGGTGGGAGCGTGTTTATTTGGGGGTGTGATTGGTGTAAGACCCTCGTCTGTGGAGCCGAGAGTGAGAGAAAGCGAGTGAGCATAATCTCCATCTGTAGCCCTGCTGCTCACTTGGCTATAAGCAAAGCTCTCTCTCAGTGTGTTGGCTATCTCTCACATGTGGCATTGGAGTTCACAAGGTTCAGGAGAAGGTGGTTTCCTTAATAGCCCTTATACATTATTGACTTTTTGGTTACATTTAATTTTCTCTAAAAACTGCGGAGCTGCCCAGTCAACTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000063_05248902_05250362.mRNA True 807 mRNA 0.43 2 5248697 5250625

Neighbor

gene id symbol gene type direction distance location
CI01000063_05198199_05217488 RHOQ coding downstream 31053 5198166 ~ 5217644 (-)
CI01000063_05189361_05189645 CRIPT coding downstream 59052 5188403 ~ 5189645 (-)
CI01000063_05160162_05161742 SOCS5A coding downstream 85421 5158567 ~ 5163276 (-)
CI01000063_05085075_05095432 MSH2 coding downstream 153170 5084268 ~ 5095527 (-)
CI01000063_05070661_05081280 FBXO11A, FBXO11B, FBXO11 coding downstream 167417 5070423 ~ 5081280 (-)
CI01000063_05252331_05253850 COX7A3 coding upstream 1269 5250005 ~ 5253940 (-)
CI01000063_05257128_05262520 KCNG3 coding upstream 6333 5256958 ~ 5263331 (-)
CI01000063_05304502_05306803 HCAR1-4 coding upstream 53814 5304439 ~ 5306803 (-)
CI01000063_05353701_05355458 ZFP36L2 coding upstream 102133 5352758 ~ 5356284 (-)
CI01000063_05473346_05474995 SIX2B, SIX2A, SIX2 coding upstream 222713 5473338 ~ 5475757 (-)
G265653 NA non-coding downstream 21855 5221736 ~ 5226842 (-)
G265635 NA non-coding downstream 123214 5125257 ~ 5125483 (-)
G265564 NA non-coding downstream 135593 5109364 ~ 5113104 (-)
G265625 NA non-coding downstream 147711 5100356 ~ 5100986 (-)
G265620 NA non-coding downstream 221849 5026267 ~ 5026848 (-)
G265672 NA non-coding upstream 13517 5264142 ~ 5264343 (-)
G265665 NA non-coding upstream 13867 5264492 ~ 5281847 (-)
G265693 NA non-coding upstream 75507 5326132 ~ 5329568 (-)
G265705 NA non-coding upstream 99241 5349866 ~ 5350103 (-)
G265709 NA non-coding upstream 110133 5360758 ~ 5365398 (-)
CI01000063_02725759_02726399 NA other downstream 2522162 2725759 ~ 2726535 (-)
CI01000063_02326799_02327290 CBY1 other downstream 2920978 2326741 ~ 2327309 (-)
CI01000063_02177769_02178239 NA other downstream 3070361 2177747 ~ 2178395 (-)
CI01000063_01669384_01670016 HBAE1 other downstream 3578621 1669317 ~ 1672019 (-)
CI01000063_05616519_05617045 NA other upstream 296076 5615806 ~ 5617112 (-)
G265976 NA other upstream 1037533 6283058 ~ 6290946 (-)
G266797 NA other upstream 2038870 7289495 ~ 7290224 (-)
G266660 NA other upstream 2188460 7439085 ~ 7441435 (-)

Expression


Co-expression Network