G269337


Basic Information

Item Value
gene id G269337
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000065
NCBI id null
chromosome length 4956624
location 3108288 ~ 3109555 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU305614
TAGGATTCAACATCTAATTTAAACTTAAATGACTTTTTTAAACAACAAATATTAAAATATATTAAATACTTCACATTCTGCAGTATTTCAAGGTCATTAATCAAATAGTAAAGTAGTGTCAGTGATCAAAGAAACTTCTTTGTTCAGACTGTCAGATTTTCTTGCTTCAATTGACCCTTCGCCGGGAGTTTGATTGACAGGCGATCTAACCAATCATAACATCGAATCCGCCATTTTGTCCGACAAAGCATTCAGGAGAGTTAGTAGATTAACATCAGTGGATTTGAACTTGAAAAATGGTGTATACTAACGTCTTTCCGTGGTTGAAACAACATTACTTCTGATGTTTATTTGATGATATAAATTCACTAGTAGGAAGAGATGATCGGTTCACTGAGGCGCTACAGCGATCTGTCATGACACATTAAAGAGAGACAAAACAGTATTTATTGTTTAAATTTCTTTAAAAATGACAAAATTTGAAATTTGAGACTTTGTTTCATATCAAAAGTAACCTGCTCTGTCTTGTCTGTCGACGCGTTGTCAATGTCCTCTTTGCTCCGCAATGTATTTTTCACTGTGTGAGGAGAGATCGGCATGGCTTTTCGGATGTAGCAACAGTATCTAAAGGGGGCGGGTCTTTGTGAACGGTCAGTTGAAGCATGAGATGCTCTTATGTAATTTTCTCAAAGAGAATATGATCATCAGGAAATTAATGTTAATTTTTCAAGTCAGCTTTTTACCAAGCGCCAATTGCGAGTAAAAATCGGTGTTGGCGAGTATAATGTATGAAAGGTGTCAATCGACAGTTGGCCGTTAACATTTTATGAATTCTAACAATACAAAATTGTGAGAACATGAACATGAAGCATGAACAGCGCTCGGGACAGCTGACAGGGCAGTGTTGCATTGTCACAAAGCTTTGCCAGTTTAAATATTCAAGCTCAAGAAAATGTGAAAGGGAAGTCAATTCGTTAGTCACGAAATCCATGTCTCAGACAGTGTGCAAATACTGAATTGAGTTCTCTTTAACGACTTCTTGCACTTGAACAGACATATTCAAAGTAAATTATGTCAAAATGCCTGTCTTGGCAAGTATCCTTCTCAGTTATGTCTTAACCCTCATATTGTGTGTGGGGTCAATATGGGGTCAACTTTTCCTTAGTTCAAAAAAACATTGATCCTTCATATCAGTTGCATAAAATTTTGTGACTTTTTCTACATTATCTATCTACACACAGACTGGGCTTGATTTAGTTGTTCTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU305614 True 1268 lncRNA 0.36 1 3108288 3109555

Neighbor

gene id symbol gene type direction distance location
CI01000065_03060532_03105332 LIMD1 coding downstream 2113 3059417 ~ 3106175 (-)
CI01000065_03037531_03045960 SMPDL3B coding downstream 62328 3037361 ~ 3045960 (-)
CI01000065_03015397_03024204 NA coding downstream 84084 3014852 ~ 3024204 (-)
CI01000065_02992054_02993108 POPDC3 coding downstream 115121 2991815 ~ 2993167 (-)
CI01000065_02979795_02989709 BVES coding downstream 118525 2977843 ~ 2989763 (-)
CI01000065_03113629_03136974 LARS2 coding upstream 3903 3113458 ~ 3136974 (-)
CI01000065_03159239_03164326 LARS2 coding upstream 49684 3159239 ~ 3164326 (-)
CI01000065_03369379_03371121 NA coding upstream 259364 3368919 ~ 3371441 (-)
CI01000065_03373810_03377138 NA coding upstream 263148 3372703 ~ 3377138 (-)
CI01000065_03385522_03396519 FEZ2 coding upstream 275967 3385522 ~ 3397081 (-)
G269304 NA non-coding downstream 157956 2949545 ~ 2950332 (-)
G269303 NA non-coding downstream 169121 2938708 ~ 2939167 (-)
G269302 NA non-coding downstream 170004 2937920 ~ 2938284 (-)
G269253 NA non-coding downstream 174742 2932150 ~ 2933546 (-)
G269348 NA non-coding upstream 194802 3304357 ~ 3312480 (-)
G269424 NA non-coding upstream 242045 3351600 ~ 3352903 (-)
G269436 NA non-coding upstream 287555 3397110 ~ 3397359 (-)
G269440 NA non-coding upstream 327583 3437138 ~ 3437390 (-)
G269399 NA non-coding upstream 381017 3490572 ~ 3491380 (-)
CI01000065_00782736_00793467 NT5C3A, NT5C3 other downstream 2324627 782697 ~ 793467 (-)
CI01000065_00622545_00624625 NA other downstream 2483631 622123 ~ 624657 (-)
CI01000065_00563411_00579174 MBPB, MBP other downstream 2528261 562848 ~ 580083 (-)
CI01000065_00050903_00055774 NA other downstream 3053901 50386 ~ 55774 (-)
G267024 NA other downstream 3062201 43039 ~ 46087 (-)
G269679 NA other upstream 664325 3773880 ~ 3774294 (-)
CI01000065_03794501_03806693 VEGFAA, VEGFA other upstream 683568 3793123 ~ 3806693 (-)

Expression


Co-expression Network