CI01000069_04171520_04172634


Basic Information

Item Value
gene id CI01000069_04171520_04172634
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4171335 ~ 4172634 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000069_04171520_04172634.mRNA
ATGTCACAGATGGATCTCCTCATCACAAATGTAGCTGAGCTCCTCACCGCTGCTGTACAGGAGGTGTTGCAGCTCATGGGTCAGGCTATGTTAGAGTATCAGAAGGAGTCTGCCAGAACACGCCTGGAGAATCAGAACCTCCAGCAGAAGCTGAAAGAACTCCAGGAGAGGATGGCTGGGGCTTCAGATGAAGTCCTGAAAGTCTCTTTTGCCAGAGATGAGCTTCATTTAAGGGAGGATCATGTGCAGGAAGATCTCGTTCATCGTGGAGATTCAGTAGTGAGCGAGGAGATTCCGAGTGACAATCCTGTTCATTTAAAGCTCGTTTTAGATGATATATCTGTAGGCAACCAACATCATTTTCTGCAAGGGACCTGTGACTATTCTTTGACAATGCAAAGACCCCTTTCCATGAATAAGAGTAGCCCTCCGAGAAGAATTCCAAACGCTTCACCTGGCAGCAGAGAGAGTCCAGTGACCAGCAACACTGAGACCCCACTGGGTTCAAACAAAATCAAGGTGGAATCTAAACCAGAGCTTCTGGAATGTTCTATTACGGAAGAGACAGGAAATGCGGCAACACAAGCTCCTGTTGTTCCCATGCAGGATGCAAATGAACACAACCAGCAGCCTGCCTCCACCTTTTCCAACAATGTTGTCCATTATAACCAACCATGTAAATTACTAAATTCTACTTCTAAACAAATTCTTAGGTCACGGGTAGAGAATACAGGAGATGTTCACAGCGCTCCCAGCATGAGTGAGAGCAGGGAATTTCTGCACAGCTGCCATGTGTGCGGTAAGACTTTTGCGACTCCCTCCAGCCTCGGAGCTCACTTCGTATGCCATTCAAATGAGAGACCTTTTGTTTGCAAGTGCTGCAAGTTCAGGTTCAGTCGTTTAGCCGATTTGAAAAAGCACGAGCGCATTCATACAGGAGAAAGGCCATATAACTGTTCTCTCTGTGGACGGAGATTCAACCGAACAGAGAATCTCAAAAGACACTTGAGGAAGGTTCATTATGGAGCAGCACTGTGAGCTTTAAGTTCACTGCATGTGTCTTCGCTGGCTGCAGTATGATAAGGGCATTCATATAATTCAGCTTGCCGACTTTGGATCACAACATTCATTTATATCTCAAAATGGCATACACCAATAATATTGTTTTCTCCCACATAAATGATGCATTGCCAACTGTTTGCATCAGACTGAAATGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000069_04171520_04172634.mRNA True 1223 mRNA 0.45 2 4171335 4172634

Neighbor

gene id symbol gene type direction distance location
CI01000069_04160575_04161329 NA coding downstream 10006 4157983 ~ 4161329 (-)
CI01000069_04140312_04141990 NA coding downstream 28491 4139614 ~ 4142844 (-)
CI01000069_04129986_04133876 MYLPFB, MYLPF, MLC-2, MYLPFA coding downstream 37412 4129725 ~ 4133923 (-)
CI01000069_03986480_03988243 NA coding downstream 182723 3985177 ~ 3988612 (-)
CI01000069_03972492_03982847 TSPAN4B coding downstream 188378 3972090 ~ 3982957 (-)
CI01000069_04174676_04182006 MYST2, KAT7 coding upstream 1157 4173791 ~ 4182006 (-)
CI01000069_04184836_04186691 G6PCB coding upstream 11581 4184215 ~ 4186836 (-)
CI01000069_04195558_04198312 AOC2 coding upstream 22474 4195108 ~ 4198501 (-)
CI01000069_04217948_04222207 NA coding upstream 44060 4216694 ~ 4222207 (-)
CI01000069_04241400_04252572 NA coding upstream 68766 4241400 ~ 4255532 (-)
G275992 NA non-coding downstream 35935 4135088 ~ 4135400 (-)
G275982 NA non-coding downstream 82977 4087961 ~ 4088358 (-)
G275981 NA non-coding downstream 83590 4087379 ~ 4087745 (-)
G275980 NA non-coding downstream 84197 4086835 ~ 4087138 (-)
G275808 NA non-coding upstream 34958 4207592 ~ 4209649 (-)
G276042 NA non-coding upstream 354448 4527082 ~ 4527880 (-)
G276052 NA non-coding upstream 382575 4555209 ~ 4557664 (-)
G276064 NA non-coding upstream 441220 4613854 ~ 4624902 (-)
G276129 NA non-coding upstream 492536 4665170 ~ 4665413 (-)
CI01000069_03804630_03807180 PRMT1.S, PRMT1 other downstream 364258 3804616 ~ 3807180 (-)
CI01000069_03768812_03787588 BRSK1 other downstream 402115 3765673 ~ 3787588 (-)
CI01000069_03415853_03417644 LIMD2 other downstream 744961 3412973 ~ 3417644 (-)
G275699 NA other downstream 1093167 2992504 ~ 3078168 (-)
CI01000069_04932463_04940554 NA other upstream 766887 4932144 ~ 4941471 (-)

Expression


Co-expression Network