XLOC_001062



Basic Information


Item Value
gene id XLOC_001062
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 11711543 ~ 11714363 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00003346
CTGATTGTCGATCTTGTGTGCCACTATGGTTGCCCCTTCCTCGATCTCTGCTTCATTTAGTGGCCGAATGCGCAGAGCAACCTAATCAGGgcatCGTGAGCTGATGGTCCATCCATTCTCCTGGCAAATCCTTCATGTTTTTATTCCCGAGTTCCCGTTACTCCGACCTGTTCTGGAGTGTCCAAAAGCCTGTTTTTAGCAGACAAGATCAACATACGCCTCAGCTATAGCGGAACGAGAATAAAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00003346 True 246 lncRNA 0.48 2 11711543 11714363

Neighbor


gene id symbol gene type direction distance location
XLOC_001061 NA coding downstream 16151 11693157 ~ 11695392 (-)
XLOC_001060 brat1 coding downstream 22018 11670879 ~ 11689525 (-)
XLOC_001059 chst12b coding downstream 69030 11641482 ~ 11642513 (-)
XLOC_001058 si:dkey-26i13.3 coding downstream 79909 11626252 ~ 11631634 (-)
XLOC_001057 si:dkey-26i13.5 coding downstream 95248 11615273 ~ 11616295 (-)
XLOC_001063 ttyh3b coding upstream 67181 11781544 ~ 11850353 (-)
XLOC_001064 iqce coding upstream 140347 11854710 ~ 11878845 (-)
XLOC_001065 grk4 coding upstream 188216 11902579 ~ 11973341 (-)
XLOC_001066 pla2g12a coding upstream 346921 12061284 ~ 12064799 (-)
XLOC_001067 NA coding upstream 350793 12065156 ~ 12068877 (-)
XLOC_001054 NA non-coding downstream 194190 11470790 ~ 11517353 (-)
XLOC_001051 BX004756.1 non-coding downstream 648896 11062524 ~ 11062647 (-)
XLOC_001050 NA non-coding downstream 773728 10936724 ~ 10937815 (-)
XLOC_001049 BX323090.1 non-coding downstream 841302 10870117 ~ 10870241 (-)
XLOC_001068 NA non-coding upstream 391284 12105647 ~ 12126625 (-)
XLOC_001072 NA non-coding upstream 722495 12436858 ~ 12441010 (-)
XLOC_001073 BX511261.2 non-coding upstream 837937 12552300 ~ 12679517 (-)
XLOC_001074 NA non-coding upstream 961061 12675424 ~ 12677983 (-)

Expression



Co-expression Network