CI01000110_03543809_03557376 (ANKRD13D)


Basic Information

Item Value
gene id CI01000110_03543809_03557376
gene name ANKRD13D
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000110
NCBI id null
chromosome length 4324856
location 3543690 ~ 3557493 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000110_03543809_03557376.mRNA
AAAGGTGGCCGCTGCCCGACAAACATTTTCCTGAAAGCCTATTCGGCGACCAAAAAATTAAATTTAACTACGTAAAATAAAACAGAGAAAACTAAACTTAAATCCAACATCACTGAAATGGCTGAAGAGGCGTTTCCTTTACATTATCTGGTGTGGAACAATCAATATCAAGAACTGGACCGAGAGCTTCAGAAAAAGCAGCATGACATGGAGTGGCTGGATCCGCGCGGGCGCACGCCGCTCGAGCTGTCAGTGTGTCTCGGGCACCTGGAGTCCACGCGCGTCTTACTGAGACACAACGCTGATCCCACACACAACAACACACAGGGATGGACAGTTTTGCAGGAAGCAGTGAGCACTGGAGACCCTGAGCTGGTGCAGCTGGTCCTTCAGTACAGAGACTTCAGAAGAGCCACAGAGAGACTGGCTGGTATTCCTGAGCTACTGAGCAAACTCAGACAGGCACGTGATTTCTATGTGGAGATGAAATGGGAATTTACTAGCTGGGTTCCTCTAGTGTCAAAAGTTTGTCCAAGCGATGTGTATCGTGTATGGAAAAGCGGTTCATGTTTGCGGGTCGACACCACTTTATTGGGCTTTGAGCACATGACCTGGCTTAAGGGCCGACGCAGCTACATCTTTAAAGGTGGAGAGAGTGGGGCAATGGTGATGGAGGTGGACCACGAGAAGCAGGTAGTGTATACAGAACCACTGTCTCTGTCTCCACGCGACACTCCCTCGCTGCTCGCCGCCATGCTGCCCTCACAGGAGAACACGGCCCAGAGACTCACCTCTCCTATAGTGTCCACTCATCTCAACACACGCAACATTGCCTTTGAGAGAAATAAATCTGGGATTTGGGGATGGCGCTCAGAGAAGACTGAAGTTGTGAGTGGATATGAAGCAAAGAGTCAGGTTTCTCAGTGCGCTAGTCCCCATAATCCAACAGCTATCACAGCGGAGGAGTACTTCGATGCAGAGTTTAATCTGAATGGCAGAGATATTGGGCGGCCCATTGAGCTTACCAGCAAAGTGCAGAGGTTTAAAGCCACTCTCTGGTTAAGTGAAGCTCATCCTCTCTCACTGGCTGAGCAGGTGACACCCATCATTGACCTCATGGCCATATCTAACGCCCACTTTGCCAAGCTGCGTGATTTCATCACCCTACGCCTACCACCTGGCTTTCCTGTAAAGATAGAAATTCCTCTCTTCCACGTGTTGAATGCTCGAGTGACATTCAGCAATCTTTGTGGCTGTGATGAGCCGGTCAGTTCTGTTACTGTACTATCTCCACAAGAAGCCACAGAGGCTGGTCAGACACCTCCTCCTCTGCAGTGTGAAATAGACCCATCTGTGTTTGAGCCTCCCCCAGAATACACCACGCTTGGACCAGGCCGCAGTGAACCGATGAGAGATGAGGATGATAATTTACTCCAGTTCGCCATACAGCAGAGCCTGCTGGACGCGGGAACAGAAAGTGACCAGGTGACCATATGGGAGGCTCTCACTAACACTCGTCCAGTTTCTCAGCCTCCGCTTTATGAGGAGGACTCTCAGCTTGAGAGGGCAATTCAGGAATCTCTGTCTTTGTCACTGGCTGGAGGGGAGAGTGGAGAGTCAGATCCTGGACTGCCGTTATCCCCATCTGATCCCGCCCTCAACTCACCTCCATGTTACAGCTCACTGGCCGAGCCTCGGGTACCGGGAGCGTTTGCTGTGGCTACCAGTTTTGATGAACAGCTACGCATCGCAATGGAACTTTCATGCAGAGAACAAGAGGAGTTAGATAGGAAGAGGAGGGAAGAGGAGGAAGAGCTGGAGAGGATACTACAGCTGTCTCTCACAGAGAAGTAACTGTAGCAATGCTAGATGTGGGTTTAAAGGAGTAATTTATTGGTTGTGTTTTTTTCTGCAATGTTAAATTATTCTTCTTATAGATTCATCACTCTTTATTTCTTTTCCAAAATAATAAA

Function

symbol description
ankrd13d Predicted to be located in late endosome and plasma membrane. Predicted to be active in cytoplasm. Orthologous to human ANKRD13D (ankyrin repeat domain 13D).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000110_03543809_03557376.mRNA True 1973 mRNA 0.49 14 3543690 3557493

Neighbor

gene id symbol gene type direction distance location
CI01000110_03523710_03531446 CTBP1, CTBP2 coding downstream 12244 3523340 ~ 3531446 (-)
CI01000110_03488751_03505468 SPON2, SPON2A coding downstream 38222 3487397 ~ 3505468 (-)
CI01000110_03453577_03480559 KDM3B coding downstream 63131 3452867 ~ 3480559 (-)
CI01000110_03438821_03442595 NA coding downstream 101029 3438773 ~ 3442661 (-)
CI01000110_03281209_03283417 EGR1 coding downstream 259841 3279762 ~ 3283849 (-)
CI01000110_03557901_03558151 NA coding upstream 352 3557845 ~ 3558151 (-)
CI01000110_03560549_03575577 KDM2AB coding upstream 2354 3559847 ~ 3575577 (-)
CI01000110_03583086_03590983 STX3, STX2, STX3A coding upstream 25521 3583014 ~ 3590983 (-)
CI01000110_03605251_03608582 RAN-1, RAN, RAN.L, RAN1 coding upstream 47441 3604934 ~ 3608706 (-)
CI01000110_03611195_03618116 NDUFS8, NDUFS8B coding upstream 53447 3610940 ~ 3618153 (-)
G325120 NA non-coding downstream 109722 3399750 ~ 3433968 (-)
G325113 NA non-coding downstream 161798 3381611 ~ 3381892 (-)
G325107 NA non-coding downstream 183500 3359976 ~ 3360190 (-)
G325094 NA non-coding downstream 198585 3344857 ~ 3345105 (-)
G325079 NA non-coding downstream 228501 3314950 ~ 3315189 (-)
G325149 NA non-coding upstream 52671 3610164 ~ 3610398 (-)
G325206 NA non-coding upstream 164937 3722430 ~ 3722643 (-)
G325162 NA non-coding upstream 206869 3764362 ~ 3765023 (-)
G325215 NA non-coding upstream 227803 3785296 ~ 3789585 (-)
G325216 NA non-coding upstream 235312 3792805 ~ 3793040 (-)
G324936 NA other downstream 423591 3013673 ~ 3120099 (-)
G323133 NA other downstream 2306841 1205829 ~ 1236849 (-)
G322580 NA other downstream 3437871 103265 ~ 105819 (-)

Expression


Co-expression Network