G331359


Basic Information

Item Value
gene id G331359
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 534077 ~ 534313 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU376658
GCCTCGTTCAGCTCCCACAACACTCGGTCCTGCTCTGCTTCATACTACAGTAACGTTAATAATCGCATCCATGAACATGATTTCTTCTTGAGTCCTATCCCGATTGTTTCCACCGTCCGTTGAGGTGAAGACCACATGTCCCAAGATTCCGCGCTCAAACTTGCCATCATCAAGCTACGCCTTTGTTTTGAATAGGCCTCTAGCGACCTCTAGCGGACAAATTTATTTACATATTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376658 True 237 lncRNA 0.46 1 534077 534313

Neighbor

gene id symbol gene type direction distance location
CI01000113_00524568_00527858 NA coding upstream 5779 523876 ~ 528298 (+)
CI01000113_00455243_00457236 NA coding upstream 75383 454875 ~ 458694 (+)
CI01000113_00428584_00446187 RHBDF1, RHBDF1A coding upstream 87433 428260 ~ 446644 (+)
CI01000113_00370404_00370736 NA coding upstream 161093 370404 ~ 372984 (+)
CI01000113_00342143_00354071 NPRL3 coding upstream 179775 341732 ~ 354302 (+)
CI01000113_00568754_00569821 S1PR2 coding downstream 34097 568410 ~ 570516 (+)
CI01000113_00574016_00587822 DNMT1 coding downstream 39142 573455 ~ 588082 (+)
CI01000113_00629848_00638123 ANGPTL6 coding downstream 94530 628843 ~ 638432 (+)
CI01000113_00645261_00649236 NA coding downstream 110948 645261 ~ 649815 (+)
CI01000113_00659612_00684227 TRIP10, TRIP10A coding downstream 125299 659612 ~ 685030 (+)
G331358 NA non-coding upstream 5145 528686 ~ 528932 (+)
G331354 NA non-coding upstream 15923 517802 ~ 518154 (+)
G331353 NA non-coding upstream 16320 517286 ~ 517757 (+)
G331270 NA non-coding upstream 20544 489840 ~ 513533 (+)
G331360 NA non-coding downstream 630 534943 ~ 535281 (+)
G331391 NA non-coding downstream 170200 704513 ~ 704739 (+)
G331397 NA non-coding downstream 180133 714446 ~ 714897 (+)
G331405 NA non-coding downstream 189474 723787 ~ 724001 (+)
G331406 NA non-coding downstream 191146 725459 ~ 725690 (+)
G331260 NA other upstream 199456 334158 ~ 334621 (+)
G331470 NA other downstream 379079 913392 ~ 916537 (+)
G331487 NA other downstream 383422 917735 ~ 922133 (+)
G331615 NA other downstream 711978 1246291 ~ 1246573 (+)
CI01000113_01424978_01425704 NA other downstream 890248 1424968 ~ 1425835 (+)
G331767 NA other downstream 1128472 1662785 ~ 1663255 (+)

Expression


Co-expression Network