G331406


Basic Information

Item Value
gene id G331406
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 725459 ~ 725690 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU376706
TTTCAAATGTTTAGCGATATAGCTGATGGAAATGCCATTTGTCGATAAAATTTCTCAAATCTTTTTCTGTTTATTTTTAGCACATAAAACCTATATCGATAGTTCAAATTTTGCAAAAATGAGTTTGGAAACACTTTTTGTCAAGAAAAAGGGCTTTAATGCAAATAAATGTGGTGTCACATGACAGAATTATCCTATACATGCAGCGTTCATGTGTTTGTGTGTTGCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376706 True 232 lncRNA 0.32 1 725459 725690

Neighbor

gene id symbol gene type direction distance location
CI01000113_00659612_00684227 TRIP10, TRIP10A coding upstream 40429 659612 ~ 685030 (+)
CI01000113_00645261_00649236 NA coding upstream 75644 645261 ~ 649815 (+)
CI01000113_00629848_00638123 ANGPTL6 coding upstream 87027 628843 ~ 638432 (+)
CI01000113_00574016_00587822 DNMT1 coding upstream 137377 573455 ~ 588082 (+)
CI01000113_00568754_00569821 S1PR2 coding upstream 154943 568410 ~ 570516 (+)
CI01000113_00997825_01005290 RDH8A, RDH8 coding downstream 271173 996863 ~ 1005399 (+)
CI01000113_01072283_01091398 NOTCH3 coding downstream 346215 1071905 ~ 1091730 (+)
CI01000113_01110162_01112498 NA coding downstream 384472 1110162 ~ 1112502 (+)
CI01000113_01120464_01124821 NA coding downstream 394708 1120398 ~ 1125031 (+)
CI01000113_01127641_01134250 NA coding downstream 401951 1127641 ~ 1134481 (+)
G331405 NA non-coding upstream 1458 723787 ~ 724001 (+)
G331397 NA non-coding upstream 10562 714446 ~ 714897 (+)
G331391 NA non-coding upstream 20720 704513 ~ 704739 (+)
G331360 NA non-coding upstream 190178 534943 ~ 535281 (+)
G331359 NA non-coding upstream 191146 534077 ~ 534313 (+)
G331413 NA non-coding downstream 44604 770294 ~ 776185 (+)
G331456 NA non-coding downstream 143648 869338 ~ 869749 (+)
G331473 NA non-coding downstream 161978 887668 ~ 887868 (+)
G331491 NA non-coding downstream 199964 925654 ~ 928787 (+)
G331506 NA non-coding downstream 205400 931090 ~ 932374 (+)
G331260 NA other upstream 390838 334158 ~ 334621 (+)
G331470 NA other downstream 187702 913392 ~ 916537 (+)
G331487 NA other downstream 192045 917735 ~ 922133 (+)
G331615 NA other downstream 520601 1246291 ~ 1246573 (+)
CI01000113_01424978_01425704 NA other downstream 698871 1424968 ~ 1425835 (+)
G331767 NA other downstream 937095 1662785 ~ 1663255 (+)

Expression


Co-expression Network