G331709


Basic Information

Item Value
gene id G331709
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1488561 ~ 1491072 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377056
CCATTCTTTATATTTAAGGCACAGTTGGTGAAATACAAGTCACAGTTACATACATACTAATAGTATGACAGCGTGACTAAACAGCACGATCACAAAAAAAAAAAAAATCACATCAAGCACATTCGAAGCCTGCTAGGCTGTTCTGTGTCAAAAAAGCAAAGAAGTGAAACCAAATCTGGAATGTTGCTGTGTGGAATGTGTATAGACCTTTAATTTCTGTCCAGATGATATGACAGCAAAACCACACAGTGAGGCGTGTACGGTTGTTGGCTTTGATGATGGGAAGTAACAGCCTGAATTGCCACCAAAGGCGGTAATGGTATCAAGGTCTAAAAATAACAACATCCTTCATGTTAAAATAACATGCTTCATTCCTTAAAATAACAACATGCTTCGTGTGTCTTTTATTATTGTTAAATGACTATGTTTATGTCTGGAATGTGAACACTGCAAAACTAAATAAAAAGTTAAATGTGATTGTCATTATTTTTCAGACTAATTAAAAGGTGATTCTTTACAATAAGGTCCATTAGTTAACATTATTTAAAGCATTAACTAACAATGAGCAATACATTTGTTACAGTGTTTATGAATCTTTGTTAACACTAAAATCAACTGTTCATTGTTAAGTACATGCCAGCCCAAGTCTATTAAAGAGGACCTATTACAGTGTTATTACAGTGTTTGGGCGGGAACCTGTGTGACATCACAAATTTGTGACAATACGGTTTCGGGAAACAGTTGTGACTAGCTAGTTGAATTCTTCAAAGATGCATCATACTATGGTATTTAAACAGTGAGTTATGTCGTTGTATGGGAAATGCACCCCTGTTTAGTTCCTGTCTCTTATGAAGCCCCTCCTTCTGAAAAGCACAATGTGCTCTGATTGGTCAGCTGGACCAGTGTGTTGTGATTGGTCAACTGGTTCAGCGTGTTTGGGAAATGTCACACCCCTAACCATAACCACGAGATTCAACACACTACTGATTAACTCAACCAGGCCTCACCCCTTTATTTTGCATACGCCTTGGGCGGGAATTATTTAAATGAGGAATATTGTGACGTGTTCGTTCCCAGAAGAAAACTCAAGACTACAATGGAGGCGTTTCAGTGATTTCAGAAACAGTGTGTGCACTGATATAGAGAGTATATCCCTATATTTTTGGCTTTGGAACTTTGAATACCTTTTTCATGCTCAAACAGCAACATTACACACAAAAGAAAGTTAAAAATGTAAATAAAAAACATGTCATCTTTAAATAATATTAACTGATGCAACTTTTGATTCTAATGTTGAAATTATCATTAACCAAGAATAATAAATGCTTTAGAAGACCTTTTTTTTTTTCATTGTTAAGCTAATCCAGTTAACTAATGTTAACAAATGGAACCTTACTATAATGTGTTACTGATTAAAATAATCATAAACTGTTTGTCAAACACCTGGGATCTTTATCGCAGGATGAACAGGTGTTGTGCTCATTAATAAGCACATTTAGTCCACTGTTACCAATTTGATAATCTACAAATGAAGGGATAAACATTAAGCTCGATTTCTTTGCTGGCAAACAACAAATAATAAAAACAAATCTCCTCTTCTGCTCACTCGTATTGTGCTTATAAGGTGGAACAGAAGCAAGTCCAGCGGTGTGTCCAAAACAATGTCTCTCATAGTTCGTCTCTGGCCGTCCTATCCAGAGGAGACTGGAGCACATCTGAGTTTTGGGCCTCTGTGCTGATCTCAGCCTGTTCCCGGGTCTTACCCGAGCGCTTCCTGTCCCAGTCTGTGCGCACTTTCTCATTGTCCCACACCGTGGAGGTTTCGGTGTCACTGATGTACCCAGGTTCGCCCGTGTAGTGTGTAGGGAACACAAGCAAGGGCTCCGCTGAGAATGCTTTCAGGTCCCTCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377056 True 1912 lncRNA 0.38 2 1488561 1491072

Neighbor

gene id symbol gene type direction distance location
CI01000113_01424978_01425704 NA coding upstream 62726 1424968 ~ 1425835 (+)
CI01000113_01376249_01385209 NA coding upstream 103159 1374067 ~ 1385402 (+)
CI01000113_01329811_01334714 LPAR2A coding upstream 153826 1328883 ~ 1334735 (+)
CI01000113_01321501_01326215 NA coding upstream 162211 1321356 ~ 1326350 (+)
CI01000113_01292096_01298082 NA coding upstream 188642 1291953 ~ 1299919 (+)
CI01000113_01507537_01509522 NA coding downstream 16465 1507537 ~ 1509522 (+)
CI01000113_01510550_01513751 NA coding downstream 19478 1510550 ~ 1514206 (+)
CI01000113_01515238_01529826 NA coding downstream 24099 1515171 ~ 1529951 (+)
CI01000113_01530888_01533572 NA coding downstream 39719 1530791 ~ 1533572 (+)
CI01000113_01547153_01553082 NA coding downstream 55664 1546736 ~ 1553786 (+)
G331611 NA non-coding upstream 88899 1393245 ~ 1399662 (+)
G331702 NA non-coding upstream 99010 1389312 ~ 1389551 (+)
G331692 NA non-coding upstream 120639 1365818 ~ 1367922 (+)
G331661 NA non-coding upstream 209761 1276338 ~ 1278800 (+)
G331583 NA non-coding upstream 230703 1257188 ~ 1257858 (+)
G331732 NA non-coding downstream 52775 1543847 ~ 1544077 (+)
G331735 NA non-coding downstream 64139 1555211 ~ 1555470 (+)
G331737 NA non-coding downstream 76757 1567829 ~ 1568207 (+)
G331744 NA non-coding downstream 94626 1585698 ~ 1586364 (+)
G331746 NA non-coding downstream 110304 1601376 ~ 1601608 (+)
G331615 NA other upstream 241988 1246291 ~ 1246573 (+)
G331487 NA other upstream 566428 917735 ~ 922133 (+)
G331470 NA other upstream 572024 913392 ~ 916537 (+)
G331260 NA other upstream 1153940 334158 ~ 334621 (+)
G331767 NA other downstream 171713 1662785 ~ 1663255 (+)
G331759 NA other downstream 176930 1668002 ~ 1828903 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 852349 2342987 ~ 2346006 (+)
CI01000113_02548934_02576888 TBL3 other downstream 1077695 2548934 ~ 2577790 (+)

Expression


Co-expression Network