G331790


Basic Information

Item Value
gene id G331790
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1733674 ~ 1781690 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377187
GCCAGGTTTGGTGACAGCACCACCTACTGGTCAGAAACAATACCAGTTTATCCAACACTATCATCTACTGTAGATCATTTTAAATGTTCATGTAAACTGCTGCAGCTGCACAACACTTTGTTGAATGGTGTGTCTCTGTGACTGCTGGTGTAGATGTTGGTGGTGTGACACTGTGGGTCGAGCTCTAGATTATTAACACAAAGATTGTGGGTTTGAACCTGTATTGTCTTTTATGTTGTTGCATTGTGCCATAATGTTGGCCTTTTCTCCCTGTAATGTTTCTTACATGGTCTATTAAATCAAAAAATACATTGATAATTTACCAGTGAGAGAATGAGATCATCTGTTGAAAATGTTTCAGAACTCATGCTCCCAAATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377187 True 380 lncRNA 0.39 2 1733674 1781690

Neighbor

gene id symbol gene type direction distance location
CI01000113_01698764_01709585 NA coding upstream 23966 1698624 ~ 1709708 (+)
CI01000113_01691097_01696776 NA coding upstream 36898 1691062 ~ 1696776 (+)
CI01000113_01666106_01684663 NA coding upstream 48973 1666066 ~ 1684701 (+)
CI01000113_01547153_01553082 NA coding upstream 179888 1546736 ~ 1553786 (+)
CI01000113_01530888_01533572 NA coding upstream 200102 1530791 ~ 1533572 (+)
CI01000113_01826332_01833431 NA coding downstream 44164 1825854 ~ 1833529 (+)
CI01000113_01834891_01839297 KCNJ2, KCNJ2A coding downstream 53201 1834891 ~ 1840126 (+)
CI01000113_01983091_01989335 NA coding downstream 201401 1983091 ~ 1989335 (+)
CI01000113_01994682_02001599 DNAAF5 coding downstream 212992 1994682 ~ 2002028 (+)
CI01000113_02042831_02055567 NA coding downstream 258308 2039998 ~ 2056124 (+)
G331756 NA non-coding upstream 95241 1638118 ~ 1638433 (+)
G331755 NA non-coding upstream 97014 1636151 ~ 1636660 (+)
G331747 NA non-coding upstream 124248 1609221 ~ 1609426 (+)
G331746 NA non-coding upstream 132066 1601376 ~ 1601608 (+)
G331744 NA non-coding upstream 147310 1585698 ~ 1586364 (+)
CI01000113_01761054_01815819 NA non-coding downstream 21459 1760927 ~ 1815997 (+)
G331840 NA non-coding downstream 74141 1855831 ~ 1856934 (+)
G331820 NA non-coding downstream 124729 1906419 ~ 1909070 (+)
G331824 NA non-coding downstream 216754 1998444 ~ 2057885 (+)
G331833 NA non-coding downstream 249148 2030838 ~ 2034228 (+)
G331767 NA other upstream 70419 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 307968 1424968 ~ 1425835 (+)
G331615 NA other upstream 487101 1246291 ~ 1246573 (+)
G331487 NA other upstream 811541 917735 ~ 922133 (+)
G331470 NA other upstream 817137 913392 ~ 916537 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 561731 2342987 ~ 2346006 (+)
CI01000113_02548934_02576888 TBL3 other downstream 787077 2548934 ~ 2577790 (+)

Expression


Co-expression Network