CI01000169_00275483_00281463 (DOCK2)



Basic Information


Item Value
gene id CI01000169_00275483_00281463
gene name DOCK2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000169
NCBI id null
chromosome length 1065687
location 275396 ~ 281463 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000169_00275483_00281463.mRNA
GACTTCCTGATGGAGACGTTTCTGTTGTTTAAGGATCTCATTGGTAAACATGTCTATCCATCTGACTGGGTCACCATGATCATGGTGCAAAACCGAGTGTTCCTCCGAGCGATCAACACATACGCCGACACCATGAACCTCAAGTTCCTCGACAACAACAACTTTGAAGTGCAGTTATGGAATAATTACTTCCATTTGGCTGTGGCGTTTATTACCCAGGAGTCTTTGCAGTTGCAGCATTTCTCGCCCACCAAAAGAACCAAGATTTTGGCCAAATACGGGGACATGAGGAGGCTGATTGGTTTTGCTATCAGAGACATGTGGTACAAACTCGGTAAGAATAAGATCTGTTTCATTCCCGGGATGGTGGGTCCTATCCTGGAGATGACGCTCATCCCTGAGGAAGAGCTGCGGAGAGCAACAATCCCCATATTCTTTGACATGATGCAGTGTGAACACAACCACTCCGGACACTTCAAAAAGATAGTAAAATGTGCTTTCATAACTGCGTACAAACTCCCAGGAATCCTGCGCTGGTTTGAGGCCATTAGCACGACCCACACGACGGTGAGTCCGCTGGAGAACGCCATCGAGACGATGGGACAAACGAATGAGAAAATCCTCACCATGATTAACCAGTACCAGTGTGATGACGCTTTACCCATAAACCCCCTCTCCATGCTGCTCAACGGCATTGTGGATCCTGCCGTCATGGGCGGCTTCGCCAAATACGAGAAGGCGTTCTTCACAGATGAATACACACAGGAACATCCTGATGACAGAGACAAACTCATGAGACTCAAAGACCTCATCGCATGGCAGATCCCGTTGTTGGGCAGAGGAATCAGTTTTCATGGAAAAAGAGTGACCGATGACCTTCGTCCTTTCCACGAGCGCATGGAGGAGTGCTTCAAACAGCTGAGGAAGAAGGTGGAGAAGGAGTATGGAGTCAGAGAGTTGCCGGATATGGATGAGAGAAGGTCCACTCGCCCACGCTCTATGCTTCGCTCAGTCCGACAGTCTATCTGCTCATTGGCTGGATCTGAATGCGGAACGCCCACTAAGATACACCCGGACAGCTTGTCTTTGGACAGTGGCGTTCCTACATCTCCCTCCATCATCCCTCGTTCCAGTGGAAGTGTCAGTGTGATGGATGAGAGCGGTGTTGAAGTGGAGGTGAAACTGAGGAAATCCAAGAAGAAGAAGAAACCCAGTCGTGGCAGTATGATCTTCATCAGCGAGGAGAAAGAGCGGTGCAGCACCCTCGACAAACGGCTCTCCAAGAAGCAGGAATTCCGCAGCGACACAAATCTGTCTGAGCCGAGCGAGAGTGGCAGCGGCCTCGTCAACTCCAGATCTCTGCCCACTATTACAGGTCTGTCTCTGTCAGTAGCCAATGGGAGTGAGGAGATGGAGTCAGCGCGGTCCAAGCGTGACAGTAAGAGCGTGTCTGTGTGTCTGCCGTCTGACCGCACAAGTGACCGTCGCTCCAAAGGAGTCATAAACCTGCTCTTTAAAACCAAGCATAGCTCCAAAGCTGATGAAGCAAAGCCATCTTCTGAACCGTCTAATGATGCATCCATTCATCATTTCTGAGTCATTTGTCTCTCAATGTTTTTTACATTTTTGCTTCTGTTTTTGCTGTTTTAACTATGAAGAGAAATGCTTCAAAAAGCTAATAAA

Function


symbol description
dock2 Is expressed in macrophage. Human ortholog(s) of this gene implicated in immunodeficiency 40. Orthologous to human DOCK2 (dedicator of cytokinesis 2).

GO:

id name namespace
GO:0046633 alpha-beta T cell proliferation biological_process

KEGG:

id description
K12367 DOCK2; dedicator of cytokinesis protein 2

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000169_00275483_00281463.mRNA True 1683 mRNA 0.49 15 275396 281463

Neighbor


gene id symbol gene type direction distance location
CI01000169_00239489_00264787 NA coding downstream 9570 239056 ~ 265826 (-)
CI01000169_00177837_00222803 TRPC7B, TRPC7 coding downstream 52593 177837 ~ 222803 (-)
CI01000169_00147221_00152422 NA coding downstream 122334 146991 ~ 153062 (-)
CI01000169_00136741_00140480 NA coding downstream 134744 135914 ~ 140652 (-)
CI01000169_00111265_00115790 DIAPH1 coding downstream 159606 111013 ~ 115790 (-)
CI01000169_00317515_00372623 DOCK2 coding upstream 36052 317515 ~ 372623 (-)
CI01000169_00415801_00420215 NA coding upstream 133865 415328 ~ 420254 (-)
CI01000169_00517967_00527104 NA coding upstream 235220 516683 ~ 527104 (-)
CI01000169_00530094_00531803 NA coding upstream 246924 528387 ~ 531803 (-)
CI01000169_00595907_00621185 ADAD1 coding upstream 314109 595572 ~ 621185 (-)
G371506 NA non-coding downstream 3763 270273 ~ 271633 (-)
G371463 NA non-coding downstream 20285 254555 ~ 255111 (-)
G371406 NA non-coding downstream 245047 26887 ~ 30349 (-)
G371554 NA non-coding upstream 180255 461718 ~ 461968 (-)
G371555 NA non-coding upstream 192184 473647 ~ 473907 (-)
G371558 NA non-coding upstream 246530 527993 ~ 528237 (-)
G371564 NA non-coding upstream 263176 544639 ~ 544882 (-)
G371462 NA other upstream 145209 426672 ~ 430082 (-)
CI01000169_00659765_00662464 HOPX, HOP other upstream 377995 659458 ~ 662710 (-)

Expression



Co-expression Network