CI01000169_00517967_00527104


Basic Information

Item Value
gene id CI01000169_00517967_00527104
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000169
NCBI id null
chromosome length 1065687
location 516683 ~ 527104 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000169_00517967_00527104.mRNA
GTGTCATTAGCTGTGCTACATGCAAACATGGATCAGCTGCTGTCCTGTTCAGATGAGGGAGAGGCCATGACTATTCTGGGCAGATATTTGGATAATGTTGTGAATAAGCAGACGGTTTCTCCACCCATTCCCCACCTTCATGCTCTGTTGACCAGTGGCAACAACCCTCCACCTGAGATCGACGCCTTTGAGCTCATTAAAGCATCCTATGAGAAGTTTGGTAGCCTGCGTGCCGATGTCATCGAGCAGATGAGGTTCAAACAAAGGTTAAAGGTCATACAGTCACTAGAAGACACAGCCAAGAGGAGTGTGGTGAGAGCTATCATGACAGAGTCCGCTTTCACTATTGAGGAGCTGGAAGAACTCTATGTTCTGTTTAAGGCGAAACACATCATGAGTTGTTACTGGGGTGCAAGCAGCACGGCGGCGGAGCGTCACGACCCCAGCCTGCCGTATCTGGAGCAGTACCGCATCGACTGCGGGCAGTTCGTTCAGCTCTTCTCCGCTCTGGCGCCCTGGAGCTGCGGCCTTCACACCAACACGCTCTCTAGCCGACTCTTCCGCCTGCTCGACCAAAACAAAGACACTCTCATCAACTTTAAAGAGTTTGTCACCGGACTCAGTGGAATGTATCATGGCGATATGACAGAAAAACTCAAACTTCTCTACAAACTCCACCTGCCTCCAGCGTTGTGTCCAGAGGAAGCAGAGTCGGCGCTGGAGGCCACGCAGTTCTTCACTGACGACGACACGCCACAGGAGGAGAAGCCAAAGGACTATAAGTACTATCTGAGAATGTGGGCCAAAGAAAAAGAGCCAAAGAAAGAGAGTATCAAAGATCTGCCCCGGATGAATCAGGAGCAGTTCATTGAGATGTGTAAGACTCTCTACAACATGTTCAGCGAAGATCCCATGGAGCAGGAGCTGTATCACGGCATTGCTACGGTGGCGAGTCTCCTGCTGCGCATCGGAGAAGTGGGCAAGAAATTCACCAACAACGGCGGAAAGAAAGCCGAGGCCCTGCTGCCCTCCACCATTGACGCTCTGCAGCCAGAGAGGGATGACTCGTCCGGAGAGGGAGGATCAGGACAGTCCCTGGTCTCCAAGGCCCTGGCAGAGGCGCAGCTAGAGACGCCACCTCCCACGGCGGCTGGCTCCGATGAAGACGCCAAAGACGACACGTCTGTTTCGTCCTACTCCGTGGTGAGTGCCGGTTCGCTGCAGTGCGAGGACATCGCCGACGACACCGTGCTGATTGGCTGCATGAGCGGAGTGGGCGGAGATGGAGTGGATCGGAGGCGGGGCAGCGCGCCGGATGCCGATTGGTCGATCACATTCGAGCAGGTTTTAGCATCATTCCTGACGGAAACATCGCTGGTTGACTACTTCGAGAAGAAACACGACATCCAGAGCAAAATAGCGGCGTGCAAATTGCTGAGAGCGGTGGAAAGACAGACCAGTTCATCAAGCGATCATGATTTCTCTCTGACCACACAATGATTACACTCATACAGACATGCATGAACACACAAACACACACATACAGATGCAAAACAAGCATATGTGTATGTATGTCCGGATGCTGTCTATAGGAGTTTGATACTTCTGTGTCATAGTCTACAAATGATGTTTAAAAGAGGTTTTAGATGACCACGTTCCATCCTAGTGTCCCGTTTTGCTGGGTTTCATCATTTGAACGCGTGAACTTGCAGGTCTGGAATGGAGGATTATGGGATATGGCCCACACAAATCTAAATATATCTATAGGAACTGTGTATATTATACTGCTTCGGCTCATTATACAGATTAACGAATGAAACGTCACACTAAATATTTGATTTGCACACTCGTCTTGAGTCCCAGGTAGGAATGAGAGTGATTATCTCACACTAAAAGTGTACATCACTAATGCTTTCTTGCACGTGTGCTATAGCAGGATATATATCGGTGTGTTTGGCGGTAAGAAGTGTCCTTTAGGTGATGAAGCGTCTGCCTCATAATGCTCTGCTTTAACTCTTCAGATTCACTTTAACACCTCGGATGGAAACAGTTGTTCACTCTGCACTCAGCTTTGGTTCAAAGCCGTGTTTCTGTGTGTTAAAAATCAGATTTAGTGTTTCTAAGTAGGTCATTGCCTTGCTTAAAAGACTCTTACCGTTGGTTGAGGACAGCGTTGCACATGTTTGTTGTGGTGTTGCGAGGATGTCGTCATTGTTCAGATGTTTATTTGCCAGAAGCTACACAAACATTACAGCGCTGACTCGTCTTAGTCGTCCAAACCGTAATGATAGGTACAGTAAAAAATGTAGCAGATTAATTTAGCACTATAATGGCCTTTACCACGTAAAGCAAGACTTGTTTCTCGTTTATTCGCCACAATATTTTCTGCTGTCAGGCCAAAGCAAGTACAATCATTGGGCTTCATTCATGAAAATCAAGCAGAATGAATTTGTGTAAATCACCCATAATTTGTATGCAAATTGTAACATTGAAATTAAAAAAACCTTCGTAAATTGGAATGCACAAAAACATTTATGCAGCCATATCTGAGTAAACTGTTGCATAAAGTTTGTAAAACAGTAAATTTATGTAAATTGATGCACTAAATTAAAATTATGTAAATTGTATTAAATCATTTTACAAGTGATTTTAAGGCATCCCGTGTTGAATTAAAAGAAAACATTCAGTATGCTTTACATGATATTCATATTAAATTGTATTAAAATTAATTGATACATTGAATTTAGTTAAACCATTCTTATATAAATCATAGCATTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000169_00517967_00527104.mRNA True 2784 mRNA 0.45 9 516683 527104

Neighbor

gene id symbol gene type direction distance location
CI01000169_00415801_00420215 NA coding downstream 96429 415328 ~ 420254 (-)
CI01000169_00317515_00372623 DOCK2 coding downstream 144060 317515 ~ 372623 (-)
CI01000169_00275483_00281463 DOCK2 coding downstream 235220 275396 ~ 281463 (-)
CI01000169_00239489_00264787 NA coding downstream 250857 239056 ~ 265826 (-)
CI01000169_00177837_00222803 TRPC7B, TRPC7 coding downstream 293880 177837 ~ 222803 (-)
CI01000169_00530094_00531803 NA coding upstream 1283 528387 ~ 531803 (-)
CI01000169_00595907_00621185 ADAD1 coding upstream 68468 595572 ~ 621185 (-)
CI01000169_00659765_00662464 HOPX, HOP coding upstream 132491 659458 ~ 662710 (-)
CI01000169_00679772_00703207 SEC24B coding upstream 151792 678896 ~ 703207 (-)
CI01000169_00708005_00711176 NA coding upstream 179753 706857 ~ 711649 (-)
G371555 NA non-coding downstream 42776 473647 ~ 473907 (-)
G371554 NA non-coding downstream 54715 461718 ~ 461968 (-)
G371506 NA non-coding downstream 245050 270273 ~ 271633 (-)
G371463 NA non-coding downstream 261572 254555 ~ 255111 (-)
G371558 NA non-coding upstream 889 527993 ~ 528237 (-)
G371564 NA non-coding upstream 17535 544639 ~ 544882 (-)
G371567 NA non-coding upstream 25833 552937 ~ 553151 (-)
G371571 NA non-coding upstream 31235 558339 ~ 558956 (-)
G371572 NA non-coding upstream 32034 559138 ~ 559376 (-)

Expression


Co-expression Network