CI01000169_00708005_00711176


Basic Information

Item Value
gene id CI01000169_00708005_00711176
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000169
NCBI id null
chromosome length 1065687
location 706857 ~ 711649 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000169_00708005_00711176.mRNA
ATACACACAGGACGGGACAACCAGATGAGTCCCAGCATGCCTCCTGTTGCTCCTGCTGGAGACATTAACATGCAGGGCAGCACAAAACTCAGTGGGACTCACAAACAAACTTGAAAAGAACTGTGAGAGAGACGTGAGGAGGGGGAGGATAGTATTGAGGGGTGAAGAGAGTCCTGGAGAGAAAATGAATGCTGCAAGATGGAAATGTTGCAAGAAAAAAGAGGGAGACAGGATGGTGGAAGGGCGGCAGACGAGTGAGGGGGTGTACGGAGGGAGGGGCTTTAAGAGAAAGAAAAAAGGGAAGGTCACTTTCCTCCTCCTCCTCTGCGTGATGGAGTCGGTTCGTGCCACATCTGTCAGTCCGTCATTGCTTCGGCCTTCCATCACACGTGTTCGCGTTATCGAGGTCGAGGACTACGATGACGTAAGCTCAAAGACGACGATCACGCCCCAGTTGTCCGGGGTCACCACCTCTCGTGTAATATCCCGACCTTGTGATTATGACCCCTGTGTGGTTCAAACCACCCCCTGCGACAAGATTTCAGCCCAGACGGGTTGCCTCTGTCCTGGGCTGACGGGCCCAGAGGAGAGACCTGGGGCCCCGGAGCTCCGTGAGGTGAAGCTGGGCGGCTCCGGGGAAGTGCTTGTGCATTGGTGCGCTCCCCGCTCCACCGTCACTCATTATGAAGTCACACTGAACGGCAGAAAAGAGCAGCTGAGTTTTGGAGAAAATCTAAGGAATGGTGCCATACCCGGACTGAAAATTGGGGAGACGGTGTGTGTGGCGGCTAGGAATCAAGCAGGGCTCAGTGAAAAGTCCTGTGCCCGATACGATCCACCGACACCCGACCAAGCCGCCCTGAGCGCAGGGATCATCGCGGGGTCTGTCGGATTCCTGCTGCTGTTTTTGGTGCTCGCTGTTGTACTATGGAAACGGAGGACGTGTCGAAAGGGCGGGATGGGAGAAGCAGAGGGCCTCGGCAATCCTTCATACACCAGTGATGGAGCGCTGTGAACAGCATACAGATGCAAACATTTCAAAAGCATGGAGCGAATGAAACAAGCTGCAAAAAGACTGCAATTTGTACTGGTCAAAAGTTTGGAATAATTATGATTTTTTAATGTTTTTGAAAGAAGTCTCTTCTGTTCACCAAGGCTGCATTTATTTGATCAAAAATACAGTAAAATCATCAAAGCTGAATTTTCAGTATCATTACTCCAGTTTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATTTTGATTCAGCAATTATTAATCATGATTCTTATTATTATCAATGTTGGAAACATAGTTTTTGCTGCTTCATATTTTTATGGAAACCGTGATACTTTTTTCAGGATTCTTTAATGAATAAAAAAGTAAAAAAAAAACAGCATTTATTTGAAATATAATATTTTGTAACAAGCAGTAAATCAGCATATTAGAATGATTTCTGAAGGACCATGTGACTCAGAAGACCGAAAATTCAACTTTACTGCATCAAATAAATGCAGGCTTGGTGATCATATAAGACTTCTTTCAATAACATTGAAAAAATCATAATTTTTTCAAACTTTTGACCGGTAGTGTATAGAGCACAGTTGTTGTGCCTCTGACTGAAAATAATGCTTGTTATTTTAAGTTCACTACTTAACCGCTGTGATTGGTTCTGAATGATTTTTATTGTGTGATTGTGATTGGTTTGAATATTTAAAGTCAACATGGAATCTGAATCGTCCGTGTTTACTTCCATAATCCACATTTGTGGTCTTATTGTGATCGATTCATAGGTGCATGTTACTCTAAAGAAATTTGGAATTTGCATTTGTAAATCTCTCATCAAAACAATAATTGCTTCACTTTCCAAAAAGCCTCTTTCAAAGTGAATGCATTCATGTTTAACTTATTATAAACACTTCATATCAATTCCTGATGGACAACATTTTTTCATCATTAAAATATCACATTATGGAAGTAACATGTGTTTTGATTGCCATTTCACGCCGACTTTAACACTACTAATGGTTCTTAGGAAGCCTGGCGCTTCATTAAGCTAGACAGGGTTTTAAAGTATCTGTTGTACAGCTACTTAGAGAGTATGTGTAACTGCTGAAAATTATTGATGATGTTTTTAACTATTGAGAGTTTTTCAATAAA
>TU424371
CCAACCCAGGAAGAAGCTTGTTGTAGTCCCTACCAGTCGTTTGTTGTAGTCCTTAAAAAGTGATTTCTGTAAAAGAAAATATCTCCTTTTGCATTGAACTTTGAGCGTCGTAACTTTGCAGATGTTGTTTATGCTCAAACAGCAACATTACACACTAACTAAAGTTAAAAAAGTGAAATCATAATCAAGAACCCCTTTAAATCAACTCATTCTTCCATAACACTGATTTTTATCCAACACTTTGTCACTTAACTATTCCTTTAAAAGCCAAATTTGCACATGCCTGCACATACACACAGGACGGGACAACCAGATGAGTCCCAGCATGCCTCCTGTTGCTCCTGCTGGAGACATTAACATGCAGGGCAGCACAAAACTCAGTGGGACTCACAAACAAACTTGAAAAGAACTGTGAGAGAGACGTGAGGAGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000169_00708005_00711176.mRNA False 2163 mRNA 0.42 2 706857 711360
TU424371 True 433 lncRNA 0.41 1 711217 711649

Neighbor

gene id symbol gene type direction distance location
CI01000169_00679772_00703207 SEC24B coding downstream 3650 678896 ~ 703207 (-)
CI01000169_00659765_00662464 HOPX, HOP coding downstream 44393 659458 ~ 662710 (-)
CI01000169_00595907_00621185 ADAD1 coding downstream 85672 595572 ~ 621185 (-)
CI01000169_00530094_00531803 NA coding downstream 175054 528387 ~ 531803 (-)
CI01000169_00517967_00527104 NA coding downstream 179753 516683 ~ 527104 (-)
CI01000169_00769848_00794717 F8 coding upstream 58249 769609 ~ 795376 (-)
CI01000169_00801511_00803912 NA coding upstream 88696 800056 ~ 803912 (-)
CI01000169_00858567_00865583 NA coding upstream 146711 858071 ~ 865583 (-)
CI01000169_00885977_00886294 NA coding upstream 174160 885520 ~ 886475 (-)
CI01000169_00895811_00905628 ARL10, ARL3, ARL3L1, ARL3L2 coding upstream 183964 895324 ~ 905628 (-)
G371601 NA non-coding downstream 49385 657187 ~ 657472 (-)
G371600 NA non-coding downstream 53212 652834 ~ 653645 (-)
G371599 NA non-coding downstream 55327 651262 ~ 651530 (-)
G371598 NA non-coding downstream 55945 650697 ~ 650912 (-)
G371595 NA non-coding downstream 62695 643661 ~ 644162 (-)
G371454 NA non-coding upstream 43704 755064 ~ 808269 (-)
G371638 NA non-coding upstream 98194 809554 ~ 809763 (-)
G371639 NA non-coding upstream 98669 810029 ~ 810233 (-)
G371641 NA non-coding upstream 99714 811074 ~ 811376 (-)
G371647 NA non-coding upstream 113132 824492 ~ 824707 (-)
CI01000169_00415801_00420215 NA other downstream 275654 415328 ~ 420254 (-)

Expression


Co-expression Network