CI01000201_00473896_00474283


Basic Information

Item Value
gene id CI01000201_00473896_00474283
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 473896 ~ 474436 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000201_00473896_00474283.mRNA
GGACGACCTGCGTTTGCTGCAGTTCCTGCACTCGCTGTGTGACTTCCTGCCTGCGTCGCATCACATCGAGCTGCTGGCGAGCCCGAGGTCACGCGGAGCCGCTCCAGATCTGGCTCAGACTCTAGAGACAGAGATACGCACTATAATGCAGGACGTGTCGTCCGTGCTCCAGTGTGGGGAGGGAGAAATGACGGGGCAGGAGGAATCGGACGCCTCCTTAGAGCCGCTCCAGAGACTGAGGGAGGAGTGGCAGAGGGAACGGGGGCGGTACAACAAGAGGCTCCGCCCCCTGGTGGATGGCACAGCCTATAGCAGACTCGTGGAGCGGCTGATTGACACGCAGCTGGACACTGATGAAGTCGCTCTGATGGAAGCGTCTCGTCTCTAGGTAAAGGAACTTTATTTCTACAGCGCTTTATACAATACTGATCATTTCAAAGCAGCTTCACAGTAATAAATAACAGAATCAATGATGCAAACTTCATCAAATATGAGATAAAACTTCTTGGTAAAAGTGCAGAAAGAGCACAAGGAACATCAA

Function

NR:

description
hypothetical protein cypCar_00023644, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000201_00473896_00474283.mRNA True 541 mRNA 0.53 1 473896 474436

Neighbor

gene id symbol gene type direction distance location
CI01000201_00421647_00426906 TBL1X coding upstream 46990 420586 ~ 426906 (+)
CI01000201_00394321_00396791 NA coding upstream 76901 394152 ~ 396995 (+)
CI01000201_00254354_00285896 NA coding upstream 187834 254115 ~ 286062 (+)
CI01000201_00124616_00139299 NA coding upstream 334369 124616 ~ 139527 (+)
CI01000201_00098073_00121392 NA coding upstream 352102 98017 ~ 121794 (+)
CI01000201_00547876_00556142 GPM6BB, GPM6B coding downstream 73440 547876 ~ 556255 (+)
CI01000201_00572895_00575129 TRAPPC2 coding downstream 98283 572719 ~ 575704 (+)
CI01000201_00576577_00577506 NA coding downstream 102141 576577 ~ 578901 (+)
G387838 NA non-coding upstream 67451 406213 ~ 406445 (+)
G387807 NA non-coding upstream 88794 340187 ~ 385102 (+)
G387804 NA non-coding upstream 119246 322822 ~ 354650 (+)
G387741 NA non-coding upstream 185364 240952 ~ 288532 (+)
G387739 NA non-coding upstream 205104 234891 ~ 268792 (+)
G387848 NA non-coding downstream 14969 489405 ~ 489702 (+)
G387849 NA non-coding downstream 24350 498786 ~ 527371 (+)
G387819 NA non-coding downstream 48473 522909 ~ 613385 (+)
G387862 NA non-coding downstream 114029 588465 ~ 589474 (+)
G387827 NA non-coding downstream 140495 614931 ~ 616868 (+)

Expression


Co-expression Network