G387849


Basic Information

Item Value
gene id G387849
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 498786 ~ 527371 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU443924
TACAACAAATGGTCATCTTGCACTGCTCTGCGATCCGCCACACATTACGGCGGAAGTACCGATCCAGTGTCTGCAAAGCGAACATGCAAAGACTAAGTCAAACGCCATAGAGTTTTTCGCCCTACCCTTCCACTTACATCACGCGTGACCTTTCCAACATGATTACGTAATGCGTGGCGCATTGCAGAGCAGTGCAAGACGAGCATTTGTGGTTAAAAAGTATATAATTTTTATTATTTTCAGAAAATGTCCGATGGTTTCTCTAGATAAGACTCTTATTCCTCGTCTGGGATCATGTAGAGCTCTTTGAAGCTGCACTGAAACTGACATTTGGACCTTCAACCCGTTGAACCCCAGTGAAGTCCACTATATGGAGAAAAATCCTGGAATGTTTTCCTCAAAAACATTCATTTCTTCTCAACTGAAGAAAGAAAGACATGAACATCTTGGATGACATGGGGGTGAGTAAATTATCAGGAAATTTTCATTGAGAAGTCAACTAATCCTTTAAAGCGATAGTTTAGCCAAAAACAAAACTTCTATCATTATTCACTCACCTCAGAGTTGTTTCCAAACCTGTATGCTGTTATTTTTTTCTTTGGAAAACAAAGGTAGATGTTTTGAAGAAGCTCTTGAAGATTCTTCAATAACATCTTTTTTATGTTCTATTGAGAAAATAACTTACAGGTTTGGAATGAGTAAATTTGCTGAATTATTGCTTTGAATGCTCGTTGGTGATAACTTACAAGCCAACATCTTGCTTTTATTTACTCTTTGAAGTACAAAAGCATTTCCTCGTTAAGTCGACGTCGTTTCATCCTTTGTTTTTTATGGCATGAACTGAGGCTTGTGTTTCGAGTTCTCCAGAAATGTGGCAGGAACGGAAAAGCAGACGAACAGAACCGGCTTGATTCGGCCCGCTGCAGCTGACAGTGTGAGAATGCGTGAGAGAGAGCATTGGTTTGTTCTCGCTCACAGCACTGGCTTTGTGCATCTAGTTCATTGGCCGCATCTTTGTTTAACTCCAGAGACTGTTAACATGAAGTAGGTCCAGTGCGTTAGGACGTCCTGAAGAGAATAAAGCCAGTGAGTGAGGAGCCTTCTTCAATGAAGTGAGTCCTGCGCTGCAGCTGCGTGCAATCTATAGTTAGACAAACTCACAGGCCTTACTGTTACCCTAATGATAGACGTTTGATTCTGTGGATATTTTACAGATTTATGAATGGCTGTTTTTGTGTTATACAGAATGTGAGTGTTTCTCGCAAAATAATGAGTCTTCTTAACCCGATTATGCTTAATAAGACGACAACGCGTGTGGTAACACTATTCAAACTATTCAAACACCCATGCAATCTCATTCCCAAATGACAACACTTCTTCTATGTCTATTAAACCTTTACACAATCACACCGGAACATTGAAATGTGCGTTGGCGACGCCCTGAACCAGAGAGAGCCGTTGTCATGTTTAGGTATGAAACAGCTTTATAAACTGTTTTCAACCACACAGTATCGTTATATCTGTGTTGGAAATATTCAAATTATCACAGAAGTACTGGATAAAAGTTTATAGTTCAGATATGTCTACAGAAGCGATCAAAATAGAGTAAATCACCTTTGAAAGTAACTTGATGCTTCAAATAAAGATTGTATCAATTACATCGTTACACCAGTAGGTGGAGACAAATGGCTTAAAAATGTATGTCATTGAATCATTTATTCAAGAAATTTGTTCAAAAATGCTGATTCATNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU443924 True 1754 lncRNA 0.39 2 498786 527371

Neighbor

gene id symbol gene type direction distance location
CI01000201_00473896_00474283 NA coding upstream 24350 473896 ~ 474436 (+)
CI01000201_00421647_00426906 TBL1X coding upstream 71880 420586 ~ 426906 (+)
CI01000201_00394321_00396791 NA coding upstream 101791 394152 ~ 396995 (+)
CI01000201_00254354_00285896 NA coding upstream 212724 254115 ~ 286062 (+)
CI01000201_00124616_00139299 NA coding upstream 359259 124616 ~ 139527 (+)
CI01000201_00547876_00556142 GPM6BB, GPM6B coding downstream 20505 547876 ~ 556255 (+)
CI01000201_00572895_00575129 TRAPPC2 coding downstream 45348 572719 ~ 575704 (+)
CI01000201_00576577_00577506 NA coding downstream 49206 576577 ~ 578901 (+)
G387848 NA non-coding upstream 9084 489405 ~ 489702 (+)
G387838 NA non-coding upstream 92341 406213 ~ 406445 (+)
G387807 NA non-coding upstream 113684 340187 ~ 385102 (+)
G387804 NA non-coding upstream 144136 322822 ~ 354650 (+)
G387741 NA non-coding upstream 210254 240952 ~ 288532 (+)
G387862 NA non-coding downstream 61094 588465 ~ 589474 (+)
G387827 NA non-coding downstream 87560 614931 ~ 616868 (+)
G387876 NA non-coding downstream 96404 623775 ~ 623986 (+)
G387834 NA non-coding downstream 98577 625948 ~ 629376 (+)
G387857 NA non-coding downstream 117174 644545 ~ 645170 (+)

Expression


Co-expression Network