CI01000206_00178241_00202393


Basic Information

Item Value
gene id CI01000206_00178241_00202393
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000206
NCBI id null
chromosome length 757353
location 178145 ~ 203585 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000206_00178241_00202393.mRNA
GTACAAATATGTCTTGTCAGGTTGACAGTCACTTATGAGCGTTTTGTCACAGTTTTGTGACTTTATGAGAAAGTTACTTCTCAACTCTTTGGAAACATGGAAGAGAGAAGTCTGATTCTCGAGGGTTTGCCGGATGATTTTGACCGTGTGAAATCAAAGGTTGAGCTTTATTTTAAAAATAAAAGACGATCAGGAGGAGAGATCGTGCAGATTCAAGAACATCAAGAGGACAAACGAAAAGCACTTCTTATTTATATGAACGAAGAAGATCTGACGAAGGTGCTTGACAAAAGAATCCATAAAGTTGATTTCAAACGTCATGGATCAGTTGAAGTGACAGTGAAACTACCAGAAGACACAAAAAGCAAAAAGATCAGACCACCAGTTCTGCCAAAGCCCAAGCTGGAGAAGAGCACTCTCCTCAAGTCACAGCCCACTCCTGCAAGCCAGGTCTCTGCAGTAAAACAGCCTGGAACAGAAATTAAAGGTCATAAAGACAATGAGGAGGATTCAGAAGTACCAGATCTTCTAATTACCACCCCTCGTCCAGTTGATAAGGACACACTTCAGATGTATTTTGAGCAGTTTGCAGAGCAATTTGAGCTAGCAAAGCATGGAAATAACAGCTGGATTCTGAAGCTCTACAGCCAATCAGATTTCAAGGAGATTTTTGGCAAGGAAGAACATGATTTTGGTGTATCTTTAAAAGTGTATAAAGACGGAAGTCTGGGAGAGAAGTCAGACCCCCGTCGCTTCATCTTGACTGGGTTTGATGGAGACACAGACCGCAAGATAATCTCAGTGTTCATTGGCAGCTGTAGCAAGACGACAGAACACACTTGGGAGACACTTGATGAAGATAGGATTGTTGTCACTTTTAAACAAGATATTGATGTGAAGTCATTTATAAAAAAATGCACTTCAAAGCAACTGTTGGGTCGAGACATCGGAGTGACGCGTTTGGAGCGAACGGATTCGATCCTGGTCCAGGGAGATTTGGAGAAGATCAGTGAAGAAATTCTCACCCTTTACTTCAGCAATAAGAAGAAGAGCAGAGGAGGAGAGATTGAGAACTTCATATGGATCAACAGACGAACAAGCGCAGTCATCACCTTTGAAAACTGTGATAATGCACATGCAGTGGTGGAACAAAAACACAATGTTTGCGGCACAGAAGTTCACACTTCACTGTTTTACTCAAGTTTGCAAAAGGCTTTAACTGGAGAAAAACCAACCCTGACTGATACCATCACAAAAGTCAACATTTCTGTCAGTGAAGATCTACTTCGTTTCTTTGAAACCAATGAGGGATGTAGAAAACAGCTGGAGAGTGATGCCAAACTGTTTCATGCCAAAGTTCTTATTGACAGCACTGCAGCACCAAGTGAAATTATACTGGAGATGGACGTCAACAAAGAGTCCCTGGCTGCACTGCTAATTGCACCCACTTGGGAGTCCAAGACAATGAGGGAAGTTCAATCCTTTTTGAGCAGATACGCTACAGAAGAGCTGCCACTGGACGAGGACGTCTGGAAGAGAGTTGAAAACGACTGTGACGGTCTCCTCACAGTTGATACAGCGCTCTTCTACAAGGAGCGCAACTCTAAAGTTGTAATTACTGGAGTGAAAGAGCAGGTCAGGATCCTTTCGGACAAGATCAGGACACTCCTGAAGAACGCTACTGTTGAGGTGGAAGTGGAAAGAAACACGATCGAGGCAACAATTCAACTAGACTGCAAAGAAACATTTGATCTAATAAAAGAGCGTGTGCAGTCCAAATTAGGGGAGGTGAGTTTATCCCATGATGAGAATAAGCACATAATATCTCTCAGAGGTCTGAAGGACAAAGTAAACTCAGTGGAGATGTTCATCAAAGACGCACAGAAGAACATAATCACGCACCAGCTGAACCTATCTTCTAATCTGATTCACTTTCTAAAGTCACTGGATCTTCAGAAGTTTGAGCAAGACAACCACATTCCAGCTAGACTTCTAAACCGAAAGGATTTTTTTGGGATCTTGGTTGAGAAAGTAAACCTGAAGAGAGCTGAAGACAAAATCGGTGAGATTCTCAAAGAGGAGGTTATACAACTTCCTCCCAATCAAACTGGAGAAGATTGGACATGCTTTCTCAGGAATCTGCAAGATGAAGAGTCATTTCAGAAAGCCAACGACATCAGGATCACACAATCAAACATGCAGGTTACAATATGTGGGTTTTCTAATGCAGTTGCAGATGTTTCAGGAAAAGTGAGGAGATATCTGGAGAACAAGGAACCAACGACTGAGAACGTCCCTCTCAAATCTGTGCGAGAGGTCGAATTTGTCGACTCCTGCCTGAATCTGTCTGAACTCCCTGAACTCAAGCGGCTTGGTGCAACGGTACTTGCTTACAGAGCATCAAATTCTCCTTGTCTGAAGGTCACGGCAGCTAAAGACAACATTAAAGATGCCGTGGGTGTTGTACAGAAGCAGTTGTCATCAATTGTCGTGGAGAAGCATAAGTATTGCAAAGCAGGAGAAGCGAAGGTTCTGGAGAAGCACGAAGCCAATGTGAAGACAAAAGCCAGAGAGAAGCAGTGCAGCCTGTATTTATCACAAGAGCAAATGGTTACATCCGGCCCTCCGAAGAGCTTCACACACAAAATAGGCAATTTGATGACTCTGAGCATCATAGAGGGAGACCTGCAGCATTTTACAGCCGACGCTTTGACCTGTCCGATGAATGCCAATCTCAATTTCAATAACCCTGTGGCTCAGCGCTTTCTCCAGTTTGGAGGCGACAAGATTACAGAAGTGTGTAAAACTCCCCAGAAAGAAAAGCAGTCTCTTCTGCCTGGAGATGTGCTGCTCAGCGATGCTGGAAAACTCAGTGCCGGGACGCTCATTTATGCAGTGCTCCCGCAGAAAGGTCAGACGCTGGACTCGCACTACCTTCAGTTGGCCGTGCATAACAGTCTCCTGAGAGCCGAGAGGAAAGGATGCGCCTCCATTGCAATGCCAGCAATCGGTTGTAAAACTTTTGGATTCTCTGTTAAAGAAAGTTGCATGGCACTTCGAGCAGCTGTACTGCAGTTCTGCGCCGACCATCAGAATTCACCTACGAATATTAGAAATATCAGTGTAGTGGACTCAGATGAGAAGATCATTGAGGAGTACGACGCTCTGATCCAGGAACTAGGATTTCCTGACATGTCAACAAAAATCTCCCAACCATCCTGGAAGCTTAAACACGGATCAGACAAAAGAGTGCTGATCAATGGTGTGCCGATATGCCTCAAAAAGGGTGACATCACCACAGAGACAGTGGACGTCATTGTGAATTCAACAAACACAAGTTTAGATCTTAACACCGGCGTTTCTGGTGCCATCTTAAAAGCTGCGGGACAATCTGTTGTTGACGAATGCAAAAAGCAAGGTGCAGCAGTGATGACGGGCGCTGGAGCGCTTCAGTGTAAGAATATCGCTCAAATGGTCGGGCCGGGGAACGTCGCAGACATCACAGCCTCTCTGGGGAAGGTTTTGAACCTCTTCAAAATCGGAAGCGTCAGAATTGAGGTAAAGAAAGGTGACATCACTAATGAAACTGTCCGAGGGATTGTAAACACTACCAACAGAGACATGAGCCTGAGAGGAGGTGTATCGGGTGCCATATTTAAAGCAGCGGGAGCGTCTGTGGAGCAGGAGTGTAAAAAACACGGTTCGCTCCAGAATGACGTCGCAGCCGTGACCAGCGGTGGGAACCTGCACTGTGATGTCATCATTCACATGGTCGGCCCGCACGCGGCCGCAGAGGTCAGATCACGCGTGAAGAATGTTCTGGAGCGCTGCGAGGAGAAGCAGATCACCACGGTCTCCTTCCCTGCCGTCGGCACTGGTGGAGGAGGAGTTCAGGCTGCGGATGCCATCGCTGCCATGCTGCAGGCCTTTGAAGATCATCTGACTCCAAACGTCTCAACCGTGATCAAGCTCATCTACATTGTGATTAACCAGGACGATGTCCTGCAAGAGTTTCAGAAAGCAAACCCAATGGAGGTGACAATGGGCCCAATTAGAGTCAAGGTTTGTAGTGGTGACATCACCAAAGAGACCGTTGAGGCCATTGTTAACAGCACCAACACAAGCCTCGATCTGAACTCAGGTGTATCAGGAGCCATTCTCAAAGCGTCAGGACAAACAGTGGTGAACGAGTGCAAAACAAAAGTGCCTCAGCCTGCCGATGGCGTGATCTTGACCAAAGCAGGAAAGCTTTCAAATATCAAACACATCGTTCATATGGTTGGGCAGACCAGTGAGAAAGGCATCAGCAGCTCTATGTATAAAGTTCTGAGGTTGTGTGAAGAAAACCACATTCAGTCAGTCTCATTCCCAGCTCTTGGAACGGGAGCTGGAAACTTGGCAGCAGCAGGAGTCGCTAATGCAATGACTGAAGCTCTGATGAAATTCATAAAGGACTCACCGAAACATCTGAAGCACGTCCACATTGTGATCTTCCAAGCGAAACTGCTGCCTGACTTTCAGGAAGCTGTCAAGAAGTGCAAGAAGATTTCTCGGAATGCTTCTGTACGTCAGCAGCCACCGGTGAGCCGGACTCAACTACCTACCTCAACTACTCAAATTTTTTGTCTAGCCAAAGAAACGGCTGCTGTGTCGTTCCCCGTTATGTCGGTTGACGTTTACGGAACGTCCCATACAAACCTGGCCGAGGTCAAGAGACACCTGGATGAACTGATCTCTGATGAGTGCATCAGTAAAGACGTCCAGTCGAGACACATCGCCGACCTTCTTGAAACAGACAAGAAGGCCATCGTGAGCCTCAGCCGAACCAATCAGGTCAGCGTTCTGGTGACCAGTCTAGATAAGTTAACAGTATCAGGGAAAAAAGACGATGTCTTGGATGCCGTGCTGAAGATAAACGGGTTCATCCAAGCAGCGCGAGACCGAGAGATGCGAGCAGGTGAGGTGAAGCGTCTGCGGGAGACGTTGTGTTGGGAGCGGGCCCGAGGAGATCTCTGGGAGCCGCTGGATCCCGCCGTCAGCTACGACATCGAGCTCGCCTACCACACCAAGCAGAAGAGCTTTCAGTACCAGGAGAATGGCGAGAGCTACACGGTGGACTTCAGCGAGAAGAAGCTCACGAACAGCAAGCAGGAGTCCTGCAGGATCAAGAGGACTCTGCTGGGAGATTCGGATACGGCAATCATTCATCCTCCTCCAACATGGACCAAAATGGATGGACGGGATTTAGAAATAATCACCTTACAATCAGATTCAGAGGAGTACAAGAAGATAAAAACAGCCTTTCTGAGCTCCAGTATCCACCCTGACGTGTTACCCGTACAGGTTGAACAGATTGACAGGATTCAGAATCAGTCCCTGTGGCAGAGATACTGTGTGCTGAAACAGGGCGTGGATAAGAAATATCCCAAACAGACAAACGAGCGCAAGCTTTATCACGGAACGACCAAAGACATATGCCAAAAAATCAACAAGAATGGCTTCAACCGAAGCTTCTGTGGGAGAAACGCGGTCGTTCACGGAGACGGCACATACTTCGCTAAAGAGGCCTGGTACTCCTGCCAGGATCAGTATTCCAACCCAGACGACAAAGGGCTGAAGTACATCTACCTAGCGCGAGTGGTGACGGGGAACATGTGTAAGAGCAGACAAGGAATGAAGGAGCCGGATCCTATCAACCCTGCTGACCCACGGGCCGGTCTGCACGACTGCGCTGTGGACAGCCTACAGAACCCGTTCATCTTTGTGGTGTTCTGTGACGCAGGAGCGTATCCAGAGTACCTCATCACCTTCAAATCTAAATTCTGAATGCACTCAGATCTCTATCTGACAAGCACATGACCAAGTTTACAAACTCTGATGACAGACGGACAGACAGATAGATGGGTGTCTAGATGACTTTGACCTTGTCACAAATATATTACCAGGACAAACACAAGAACAAATGTTTTCAGATGCAACTTTTATCAGTAGCGCTGTCTATCACCAAAACACAACAAAACAAAAAACAACAATCACTAAATTAATTGGTAACAACTTATAATAAGGTCATATTTGTTAACTAATTAATGCATTAACTAACATGAACGATATATTTTTTACAGCATTTATTAACCTTTGTTAATGTTAAATGTTCATGTTAGTTCAAAGTGCATTAACTGATGTCAACAAATACATTTTTAAGATTAATAAATCCTGTAGAAGTATTGTTCATTGTTAGTTCATTTAAGCGTATTAAATATTACCAGATACAACTTTTGATCTTAAAAATGTATTAGTAAATGTTGAGATTAACATTTAAGATTAATAAATGCTTTAGAAGTATTTTTCATTGTTAGTTTCCTGTTAACTAATGTTAACAATTTTGTAAAGTGTAATGGTGAATATATTCATCATAACTGCCCATCAGATGATCACTGAACTCTGTGATCCGTTCACACACAACACATTGTTGTGTTTGGACATTTTTAAGACTTGTTATTATGATTATCCCTTTGTCACAATATTTTAATAATTAATCATATAGGTAACATATAGACCACCTGTAGTCAATAATTTTATCCCTTAAAAACAAAATTACATATTTTCCTTGAAAAAAAAACTTCATTCCTTAAAATAGCTTGAATGTAACTCGACACCCTTGCCTCATTTAGTATACACAGTTCTATGAATATGCAAAATAGCCCCGCCTCCACTCACTCACACCAGCTCAGAGATCCACTCGATCACACGTTGACGTGATTGGTTACAAGATAGTTTATGACGTCAGAAACACCAGCAATTTCAACTTTTTGAGACTGTCTTTGGATCACTGCAGTTTTAAGAAGAAAACACTCGGCAATGGTGTCGACTTATGAATTTGCACATGGTTTATCTTAAACTTGATTTTCACCACAGGGGGCCTTTAAATCAACAGCCCTACAGAAGGTTTTTCAGTGTTTTAATCATTCTGAATGTATGAAGGATTGATTTAGTCTGTATCTGAAACTTTTTAACAAAA

Function

NR:

description
LOC100148704 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000206_00178241_00202393.mRNA True 7018 mRNA 0.44 23 178145 203585

Neighbor

gene id symbol gene type direction distance location
CI01000206_00029745_00051502 NA coding upstream 126224 29745 ~ 51921 (+)
CI01000206_00021515_00023628 NA coding upstream 154512 21515 ~ 23633 (+)
CI01000206_00220974_00253610 NA coding downstream 17389 220974 ~ 253610 (+)
CI01000206_00385497_00393583 R3HDM1 coding downstream 181912 385497 ~ 393583 (+)
CI01000206_00426915_00452327 NA coding downstream 223209 426794 ~ 453106 (+)
CI01000206_00475810_00481198 LCP1.S, LCP1 coding downstream 272225 475810 ~ 481222 (+)
CI01000206_00537962_00541275 NA coding downstream 334304 537889 ~ 542150 (+)
G389642 NA non-coding upstream 19236 157555 ~ 158909 (+)
G389597 NA non-coding upstream 31937 142077 ~ 146208 (+)
G389632 NA non-coding upstream 43568 99628 ~ 134577 (+)
G389623 NA non-coding upstream 107991 69585 ~ 70154 (+)
G389594 NA non-coding upstream 123780 54138 ~ 54365 (+)
G389658 NA non-coding downstream 91898 295483 ~ 295961 (+)
G389672 NA non-coding downstream 123376 326961 ~ 327166 (+)
G389684 NA non-coding downstream 140203 343788 ~ 344204 (+)
G389728 NA non-coding downstream 301932 505517 ~ 505814 (+)
G389753 NA non-coding downstream 307344 510929 ~ 511157 (+)
G389767 NA other downstream 357560 561145 ~ 565669 (+)
G389725 NA other downstream 376246 579831 ~ 583898 (+)
G389774 NA other downstream 402750 606335 ~ 608065 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location