G389759


Basic Information

Item Value
gene id G389759
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000206
NCBI id null
chromosome length 757353
location 527097 ~ 527755 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU446205
ACGGGACCATTTGAAAGCAGCTGTCAAATGCACCGAATTGAGTTGGAATAGTCTTGGCTATTGGACCCGCAGTCTACCCGTGCCTACCGCACGTCCGACCTGCACCCGCACCGCACCCGACACATAAATATTATTCCACCCGTTACATAAAATTTGGCGGGTCACCCGTCGGGTACCCGCCCGCGTGCAGGCCAATAATCTGTATCGGCCAATAAAAGCAAATTTTCCACTATCAGTTAAAAATAGAGATGCACCGATATATCGGCCAATAATCGTATCGGCTGATAAAAGCAAATTTTCCACTATCGATTANNNNNNNAGAGATGCACCGATATATCGGCCAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU446205 True 346 lncRNA 0.47 2 527097 527755

Neighbor

gene id symbol gene type direction distance location
CI01000206_00475810_00481198 LCP1.S, LCP1 coding upstream 45875 475810 ~ 481222 (+)
CI01000206_00426915_00452327 NA coding upstream 73991 426794 ~ 453106 (+)
CI01000206_00385497_00393583 R3HDM1 coding upstream 133514 385497 ~ 393583 (+)
CI01000206_00220974_00253610 NA coding upstream 273487 220974 ~ 253610 (+)
CI01000206_00178241_00202393 NA coding upstream 323512 178145 ~ 203585 (+)
CI01000206_00537962_00541275 NA coding downstream 10134 537889 ~ 542150 (+)
CI01000206_00571550_00572992 NA coding downstream 43795 571550 ~ 573289 (+)
CI01000206_00666815_00743152 SH3RF3 coding downstream 139060 666815 ~ 743152 (+)
CI01000206_00748542_00751311 NA coding downstream 220787 748542 ~ 751571 (+)
G389753 NA non-coding upstream 15940 510929 ~ 511157 (+)
G389728 NA non-coding upstream 21283 505517 ~ 505814 (+)
G389684 NA non-coding upstream 182893 343788 ~ 344204 (+)
G389672 NA non-coding upstream 199931 326961 ~ 327166 (+)
G389658 NA non-coding upstream 231136 295483 ~ 295961 (+)
G389764 NA non-coding downstream 27306 555061 ~ 555276 (+)
G389729 NA non-coding downstream 64550 592305 ~ 592887 (+)
G389769 NA non-coding downstream 69160 596915 ~ 597114 (+)
G389730 NA non-coding downstream 76218 603973 ~ 606233 (+)
G389752 NA non-coding downstream 118696 646451 ~ 689149 (+)
G389767 NA other downstream 33390 561145 ~ 565669 (+)
G389725 NA other downstream 52076 579831 ~ 583898 (+)
G389774 NA other downstream 78580 606335 ~ 608065 (+)

Expression


Co-expression Network