CI01000229_00052137_00112907


Basic Information

Item Value
gene id CI01000229_00052137_00112907
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000229
NCBI id null
chromosome length 388777
location 50616 ~ 112939 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000229_00052137_00112907.mRNA
ATATATAAACTGTTTTAATTGTAATAATAATTACAGTAATGGACAGACTCAGACTGTTTGTATAATCCTCTCTGTTGGAGCTGATTTGGTGATTCTCCTATCTTGTCTGTTCATTGCTGTTTTTAGCATTTTATTTTAAAATTTTAAATGATTGCTACTCATTTTCTTAATAAAACCTCTGCAATTGTGTCTAATGTCTCCTTTCCTGAGATATTTGTTACATATATGTCCATCAACTACCCGACGTGGTAACACTTTATAATAACTGCACACTATGAAGCATTAGTTAAGCATTAGTAAATAGTTAGTTCATCATTTATAAAGCATTAATGGACATTAATAAGCAGTTTATAAATACACCTATAAATGCTTTGTTCTTGATTTATAAGCATATCTATAATGCGTTTAATAAATGTATTTTCATACTTTATTAATGATCAATTTATAATTTCTAAATTAAGTATTACATTATTTACAAACCAGTTATTTAGGAGTGTTCAGTGGTTCATAAGATCATTTATAAAGTGTAAGTAAATGATTAATAAACTATTTAAATGTACATTTATGCATTATATTATTTAGACATATAGTAATAGTTACTCAGTGTGTTAATAAATGCTTTATTAATACATATTCCTACTGTAATTCATGATTAATTCAGGTAGTTATAAAACATTTAGTAGTTGTCAGTGAACTATTTTTGTGAGCTCATCTAAATTGAGGACTATTCATGCTTCGTAAAGCTTTTATAAAGGAGATTTAAAGGATACAGAACATAGAAATATTTATTTAAAGGAAAAAAAAAACGAAACTTTACGATGGGTAACTTGATATAAAATTAAAAGTAAACCTCTGCAATTTCACAGAAAGTAAAAATCCCTGTACTCCTCCAGAAAACATAACTGTGCAGCAAAATGAAACTAAACTTTTGCAATCTGATATAAAAATACATTTCTGTAAAGTGTAAACATTGCTGAATAAAATTTTACCAGTGCCAACACTGGATTACAGGAGTGCCAAAATACAATGTTTTTATAAAACAATAATAATGTAAAAAAAAATATTTCACAGTGTCAAAACTACCTCAGTACTAACTTTAAAACATTAGAGAACAGCAGTGCAGAAGATCACTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGCAGAAACAGAAAATGGCTGACAAGTGTGATCTGTGTCTGCTGGGACTGATCATTCTCTGCTCACTTCTCACAGACAGACTCCAGATATCAGCTTCAGATCACTGTATCATCACTCTGACTACAACACTCCTGAATGAAGATGACAACAGAGAGTGGAGATGTCGGCTTACTCACAGAAATCAAGTCAAGACCTCAGTCAGATACACTGTCAAGTATTCAGCTCAAAATGTTACAACGACAGCACTGATTCCAGACCACACCACAAAGTCAACTATAAAGACACCAGAAACTAAAGCTCAAGATGATTCAACGACAGCAGTGATTTCAGTCCACACCAAAACCTCTCAGGACCCCTCAACTATAAAGACACCAGAAACTAAAGGTACATCATCACTGTCTTTCATCAAATCAAGTATACACTGTCAAGTATTCAGATCATCTGTGCAAGAAGAGCTGGTGAGTTTGAGCTTCACACAGTCTGATGATTCACACTCATCTGATCTGGAACAATCAGCGATCATGAGCGGTGAGCTCACTGTTGAGGTTTGGAAACATGTTACTGCTGAGCGTGAGACCCCGGAATCAGACTGGTCCACCAAACTAGGGACTGTGAAAGACAAGATCATCCAGAGACTCAACGGTCCTGCAGTCAGCATGACAGATGCAATTATCAAATGGATAAACTATTGCTATGGGACAGACTACCAAAATTTGACTTACTTCTGGGCAGCGATGGTCATCACGACATATGTAAAAGAGATAGACGAGCGCACAGTCACAGATCAGTGGAAGGAGCACAGTAAAGACCCGTTTCCCATCTACACAGTGATCGACAAACACTGCAAACAGAGCAGAAGAGGAGACCCCTGGTTTGAGTTCACTCCATATGAAGCAGGTTATTCTCTTATTGGAGCGTTTGTGGAAACCTCCAGCTTTGGCAGCAAGTTTGAAAATGGCTGTAAGACCAAGAACCAGCCTGAAAATGACATGCTGTACCTGCAAGCAGTGCATAGCCACAGTCTGTGCCTGTTATGGCCTTCCCAGTGTTTCCGGGATGCCAGCAGCCCCCTGCTGCCCGCAGCAACATCCGCAGGTGAGCGAATGGTCAGTTTATCATCCACGAGCCATTTCCCTGCCAGCGAATTTAGCCTTGCTGGGGAACGGCACCAGGCAGCAAACATTGCCGCTAGCGTTAGCGTTAGCAGTGAGATTCAGCTGCTATGTCAGTTTCTAGACATGTGGAGAGCCATTCCAGGCATTCCGTGTTGGCTGCTAGACATAATTCAACACGGGTATTCTCTTCAGTTCAGGCACAGACTGTCCCGCTTCAATATCGTGGTCCAGTCTCTAACACTACCCCAAAATGCCTCTATTTTGAGACAGGAAGTTTACAGCCTACTTGCAAAAGGAGCAATAGAGCGAGTCCCTCTAAGCAAGCTATTTTGTGGTTCCCAAGAGATCACAAAGCACATAGAGACCATTTCATCAACTCTGTGCCGCTTCAGACCAGGCTGTTACCCTGAGGAAATTTCAGAGGCTATTAGGACTTATGATGTCGGCTTCATCAGTCTGCTATCTGGGCCTTCTGCATATGTGACCGCTGCAGTTATGGCTGAAAACTCAAGTCCCTTGGAGGATGAAAGAGTGCCCGCCGCTCTTCTGAAAAGTGAGACGAGAGAATATGAGGACGCTGGACTGTTGCTCAACTCACCCTACTTCTCAGTGCTGAGAAAAGAGAGAGACATTGACCTCATAATTTCCCTGGATTTCAGTGACGATGATATTGAGACCTGGAGGAACAAATATGCCACATTTCAAGGTCCTTACAGCGATAAGATGATCGCTGATCTCATGAAGGTCGCTCGAAAAAACATCACAAACATCACATTGAAACTGCTGGAAGAGATTTGTGAGGTCACTGAGACTAAATGTTTCTCAAATATGAGTGCATCTAAACCCAAGGAAAGTGGTGAGGTGAAAATCGAACACTCTCTGAATAAAAATGAGGAAGAGTTTGTAGTCAAACGGAGAAACACTGTTCTACAAAGCCTGCAGAAGATGCAGATACAGTGTGGCCAGAATGAGGTGCCAAACATTGCATTACTGGGTTCTGGAGGAGGAGAAAGAGCCATGGTGGGTTTGCTGGGATCCCTGGTTCAGCTCCAGAAAACAGGTCTTCTGGACTGCATTCTTTATCTGAGCGGAATCTCTGGATCCACCTGGTGTATGGCCTCCTTATATCAGGAATCAGACTGGTCCACCAAACTAGAGACTGTGAAAGACAAGATCATCCAGAGACTCAACGGTCCTGGAGTCAACTGGATAGACGCAGTTTCCAAACTGAAGAAATATTACTATGGGAAAGACTTCTTCAGCTTGACTGACGTCTGGGCAGTGATGTTCGTCTCAACATATATGAAAGAGATAGATGAACACACACTCACAGATCAGCAGGACCAGCACAGTAAAGACCCGTTTCCCATCTACACAGTGATCGACAAGCACTGCAAACAGCGCAAGGAAGCCGACCCCTGGTTCGAGATCACTCCACATGAAGCAGGTTATTCTCTGACTGGAGCATTTGTGGACACCTCCAGCTTTGGCAGCAAGTTTGAAAATGGCTCTAAGAAGAAGCCGCAGGATGAAATTGACATGCTGTACCTGCAAGCTCTGTGTAGCAGCGTTTTAGCTGATGAAGAGGAGATCTGGAAATGGATAAAAGCTCTTTTACTACCTGAAATAAAAAAGAAATGTGAGAAAATGAGGCAAGATCCAAACTCCCCACCTATAGATGAATGTCACCAGGTGCTCTTGAACCTTGTGAACATGAATCTCACGATGTTGAAAGGCGCTGATCCTTCTGCTTTTGATAAAGACATCAGAACAAAGCTGACAGACCTCGCTGGAGGCAAAAGTCAGTTAATTTTTCAAGTGGAAAAACTGAATGCTGAAAAAATTGCTGATAAAAAAGCAGCAAAGCTGTACATGGAGCAATACACCATAGATGTATGCAACTTTTTGAGTGGTCGGTTCAATTTCTGGCCATTTGATGTTTGCATGAGCATTTGCAGATGTTTGGTTCAGTGGATCTGGGGCAGGAATTATAACTTCCTTCACAACATGACAGATGCAACAGTGCCCGCCGCTCTTCTGGAAAGTGAGACGAGAGACTATGAAGACGCTGGGCTGTTGCTCAACTCACCCTACTTCTCAGTGCTGAGAAAAGAGAGAGACATCGACCTCATCATTTCACTGGACTTCAGTGCGGGTGATGATCCTTTCACGACAGTGAAGGAAGCTGCTGAGACGTGTAAGAAACTAAACATCCCTTTCCCTGAGGCCAACATAGCCAATGAACTCTCAGACAAACCGAAAGACTTCTATGTGTTCAAAGGCCAAAACACTCCAACCGTGATCCACATCCCTCTCTTTAATATGTGTGTTAATGTTTCTTCAGACAAAATTGAGGCCTGGAGGAACAAATATACGACTTTTCAAGGTCCTTACAGCGCTGAGATGATCACTGATCTCATGAAGGTCGCTGGAAAAAACATTATAAACAACAGAGTGAAACTGGTGGAGCAGATCCGTGCGGTCACTAAGGCTAAACAGCTCCAGGCAATGGCACGACAAAATCCAACACTGTGACTCAACTGAATATGCAACCAATGGCAATCTGA

Function

NR:

description
hypothetical protein cypCar_00049467, partial

GO:

id name namespace
GO:0009395 phospholipid catabolic process biological_process

KEGG:

id description
K16342 PLA2G4, CPLA2; cytosolic phospholipase A2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000229_00052137_00112907.mRNA False 4919 mRNA 0.40 27 50886 112939

Neighbor

gene id symbol gene type direction distance location
CI01000229_00122889_00158667 NA coding downstream 9908 122847 ~ 158705 (+)
CI01000229_00161103_00173718 GOLGA2 coding downstream 48164 161103 ~ 173718 (+)
CI01000229_00276495_00285291 CIZ1A coding downstream 163556 276495 ~ 285291 (+)
CI01000229_00285850_00289175 NA coding downstream 172911 285850 ~ 289772 (+)
CI01000229_00297413_00299522 NA coding downstream 184046 296985 ~ 299537 (+)
G395823 NA non-coding downstream 61014 173953 ~ 188635 (+)
G395826 NA non-coding downstream 78204 191143 ~ 196557 (+)
G395878 NA non-coding downstream 94652 207591 ~ 207791 (+)
G395830 NA non-coding downstream 96828 209767 ~ 211380 (+)
G395880 NA non-coding downstream 101979 214918 ~ 216695 (+)

Expression


Co-expression Network