CI01000299_00013442_00032151


Basic Information

Item Value
gene id CI01000299_00013442_00032151
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 12783 ~ 33074 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_00013442_00032151.mRNA
CTATAAATGTAAAGGGAGACAGAATTGTCACACTTTTTATTCCAATGAATATTTGTGAATGTAGATGGTTTGTAACAGATAGATTTGTATTTATAAATTAAATACTCCATAGGAAAAAATATTGTTAGACAATTCTTTTTGCTAATTTTGCTAAGGTATTTCATTGGCTTGCATTTTGCAATCCCATTGACTGTGTGTTTCTATTAACATTAAAGGGGTAGTTCACCCAAAAATTACATTTCAGAAATAGTTTTACATTTACTTAACCTCATTTCATCTATGAAATAGGAAAGCAGACATCGTACATAAATCAAATACTCATGCTACTATTGTATTATAACTCAAATGTTATTTTGTGAGTCCTGCAGACAGCAGGTGCAAAGTCAAGTTAAATTTATCCTTTACTTACAAATGACTTTCAGTTTCTATTTCCAGGAAATGCAGCTGGTTCTTGAACTTGTCATGAACAGTTTCTGTTTCTATTTCCAATGTATCTAATGTTTGAAAAATATGCATGTCAATAAATGACAGATAGCTTGGATTTAAAGAGTGTGTATGGTTCACATGAAAAAACTTTAACAGATGGAACCATTCCATTGCACAAAAGGTTCTGGGATATTCCAGAAGAGGAGCATTGCTGTGTCAAATCTTCAGGTGTGATGGCACCAAAATGGGCACGTACTGAGAAACCAGTGCAGATGGATCCTGGAGAAGATGGGGAAGAACTACAAGGGGCTAGTGGAGGTGTTGTTGAACCAGATCCCTCTGGGAGTTCTTCTAGGGATATTGCTGAGCTCAAGCATATGTTCCAGAAATTCCTGGTTGATCAAAGAGAAAGACAAGTCCATCAAGAACAAGAAAATGCACGGCAAGAAACAAGATTGAAGTCCTTGCAACATCAGTTTCGCTTACTGCAGGGAGAAGTAAGTCAACATACCTCACTGGGAAGTCTGCCACTAGGGGAGAGTGAGGGCCCAGTGTGCAAATGGCCTCCAGAAGACTGGGCCATTCGACTAGTTCCTCTACTCACTGGTAAGGCCCGGGCTGCCTATGTGGCTATGGATGTGGAAGAAGCGACCGACTATGGGCAGGTGAGAGAGGCAATATTGAAGAAATACTCTATCAATGCTGAGACCTATCGTCAGCGGTTTCATTCTATGGAGGTGCTGATGGAAGAAACTCCTAAGGAATTGTACGTTCGGTTGAAGGATCTGTTCTATAAATGGGTGAAACCTGCAGAAAAGACTGTATATGAGGTTGCAGAGAGTATCATTTTGGAACAGTTTTTAAGAATGTTATGTCCTGAACTGCAAACCTGGATTAAAGAGCATGATCCAACCTCTGCTGAGGAGGCTGCCAGGTTGGCGGATGTATTTGTGGCAGCTAGGCGAAGGACTGAGCCTTGGAGTTTTGCTCAGTGGAAGATCGTAAGGGACAAGCCGTCCTCCCGCAAGACAACCTTACTGCAAGAAGGGGGTAAGAGTATGGGTGAGAGACTGGTGAAACAAACAGAAATGTCTAGCTTACCTACAGTTGGGACTATTAAGTGTTTTAGTTGTGGCCAGATAGGCCATAAGAAACCAATGTGTCCAAACTTGAATAAAAAGCTTACCAATGTCTGTTATGTTCCACGGCTGATGAAACCTGAACCTAGCATTACTCGAATGCCCAGTGATGTCACAATTCCTGTAGAATTGAATGTTAAAAAGGTTATAGCTTTGGTAGACACAGGATGCACTCAAACTTTGGTAGAGACTGATCTTGTATCTGAATGTTCTGGGGAAACCGATGGCCCTGTTATGGTTAAATGTATCCATGGTGAAGAACTGTCTTATCCAACCACTGAAGTGTATTTAGGGGTTGAGGGGCAAACTTACCTAATGAAAGTGGGGCTAGCACCAAAACTGCCTTATCCTGTGATCATTGGTCATGACTTTCCTGTGTTAATGGACTTATTGCAGCCAAGTAATACCTGTAATGTGGTGTTAACTCGTGCAAAGTCTAAACAGAGCCAGGAGGTGAATGAGACAAATTCTTTGAAATGCCTGCCTTTTTATGACTGTGATATTACAACCCATCCAGTGAAACCTGTAAAGTCTAAAGCAGAGAAGAGGTTAGACAAGTTTCAGGGAACAGTGGTGCAAGTCACAGATGGAGGGAGCTCAGAAAACCTTAATTTAGAGTGGCAAATCCCTGACAATATGTCTGAACTGCAGAAAACTGATTCTGAAATTGGTTCCATTTATTCTAGAATGACAAATGTAAAGAAAGACAAAGAGATGGTCTTCTTTAAAGGTTCTACTTTCTGTCTAGAGAATTATATTTTGTATCGTAAGACTCGAAACAGACAACAAATGGTTCTTCCTATGAGTGTACGTAACATGGTGTTGAAGATGGGGCATTCTATCCCCTGGGCCGGTCATTTGGGCCGTCGTAAAATGTACCACCGAATCAGTAAACACTTTTTCTGGCCAGGGATGACCCAGAATATAGCTAAGTTTTGTAAGATGTGTCCAGAATGCCAATGTACAGCCCCTCGTGGTCCTCCAAAAGCTCCCTTGATGCCTTTGCCAGTAATAGAGGAGATCCTGACGGACAGAGGAACCAATTTTACCTCAAAACTGCTGCAACAGGTCTATCAATTGCTGGGTATAAGAGGTTTGAAGACCACACCTTACCATCCTGAGACCGATGGTCTTGTAGAAAGATTCAATCAAACCCTTGTTCAAATGCTCCGTAAATTTGTGAGTGACACAGGATCTGATTGGGATCAGTGGTTACCTTACTTACTTTTTGCGTATAGAGAAGTTCCACAGGCTTCTACAGGTTTCTCTCCCTTTCAATTGATGTATGGCCATGATGTGCGGGGTCCTCTGTCGTTGTTGAAAGAGTCCTGGGAGCAAGTTTCACAGACATCTAGAAAGGTGAATGTCATTGATTATGTGTTGCAAATGAGGGAGAAATTGGAGAGAATGACCAAGTTGGCAGCAGAACACTTACAAGAAGCACAGCGTAGGCAGAAATGCTGGTATGACAAGAAAGCAAGGCAGCGGTCCTTTGAAATAGGTCAGCAGGTTTTAGTCATGCTTCCAACAGAAGAGAATAAGCTGTTGGATAAATGGCAGGGTCCATTTAAGGTGACCAGGAAGCTAGGACCTGCAACCTACGAAATTGCTACTCCTGGTGGGTCACGTTCTCACAGAACATTACATATTAATCTCTTGAAAGAATGGTTTCCACAGAAAGAGTCTGCAAGTGTGAATTTGATTCGGCTAGTGGAAGATGAAGAAGAGACCAAAGAACAGTACCTATCTATTAGTCAGGATACCTCCTCAGTTAATCTTGAACACTTATCAGGGGAGCAGAAAAGACAAATTCAAGAGTTATGTGATCCAAAACTGTTTAGGAATACTCCTGGTTGTACCTCTCTCATTCAGCATCAAATTGTGTTGAAATCTAATGCTCAAGTAAAAAGAATGAGTTATCGTATTCCAGAAAAGATGGTTCCTGATTTTGAGAAGATGTTTGTGCTTCAGACAGATGCTTCTGAAGTGGGTTTGGGTGCTGTCTTGAAACAAGAGCAGGGAGGGAAAAAAGCTGGCTCCGGTGGCGGCACATTCAAATACCAAGGTGGAGAGAGGGCAAGGCGGTTTCTCGCAAGTAGCGCAGCTGTTCACAGATCCAGTCAGCTGCTAAGGCCGATGTTAAATCTTCAGGATATGGTTGTGTCACCGGGAACTTTTCAAGACTCTCGCTCGCCCCATATTTCAAGAGTTGTAATCCAAAAGGCTTACCACTGTGGTTTTCCGCTGTTAAAACTTATATCCCATTTAATAATATTGCCAGCGTTATCCACTTTCCCGGATCACCGGAGGCAACACAGTTCTTCTCGCGCTGTCGTTTGGTGTTCAGGCGATCTCTGTAGATTTTTTCATGAGACTGAAAAGCCATCCACTGCTGCTCAGACAGCGGACAAACATACTGCTGGAAAGTCGAAAGCTCTTCTCCCGGTGGATGAAATCCACTGGAGAAATCATGAGGTAGCGACGACTGTTGGTATATTCTCCCGGCGAGTAGTGGTTGTTTGTATGCAAGCTTGATTGTTGCAATCAAACACATAGTCCATAATAGTTGCCAAAGCATCTTATCGGCACCTATTGCATTAACAATGGCAATTACAACGGGTGTGATTGTTTAGTTTGACCAAACAACATTGTGGCGTTCGCGTGCACGCGACCTACGACCTGCCGCCATCTTGACACACACACACACACACACACACACACAGAAAGAGTGAGACTGAGGGAGTGAGGGGGGACAGAGAGAGAGAGAGTGTGAGATTCAGAAGAAATATTTAAAAAACAAAACAAATATATTGATCTGAAATATAGTACATTCATTTTAAATTCATCCAGGTTGAATTACCAAACATACAATCATAGTTTAAATCAAACAATGATTTCACAATGATTTTTTTTGTCCATACTTTAAACCCTGGCCATGGCAACACCATTCGAGATATCCTATAATCGTTTGCAATTTAGCATCTTCAGTATCTTGTCATCTTGTTCAGAAAGTTTGGTGGCGATTGCATGAATCCCCTAAGAGGAGTAGGTAAAATTTCAGAGCTTGTTTATTAAAAAAAACCCACATTCAAACCAAAATATCTGACTTCCTCTTTGGCGACTATCTTGAAGACCATAAATTTCGCCGCCGAGAGGCTGAGTAGGGGAAACTAACTTGTTGGACGTGCTTCCTTGTAATGATCATTGATCCAAAGACTTCGTTTTCAAGATTTATTTGCATAAGTAACAAACAAGGTTGTGCATCTAGTACATGCATCCAAAAGTCATGATGAACTGCATTTAGAAGCTTTATAGCAGTCAGCAAAAATAAGCCTTCCCCCGTCACCCCTTCTCTCCATGCACAAACACACAGGTGAACAGAGGATATACTTTTACTACTTCCACAATCACCAGGTGCCGTAATCACCGTAAGTGACCAAAAAAATGTGTTCAAAATA

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_00013442_00032151.mRNA True 5023 mRNA 0.42 6 12783 33074

Neighbor

gene id symbol gene type direction distance location
CI01000299_00005753_00010092 NA coding upstream 2558 5635 ~ 10225 (+)
CI01000299_00042567_00045857 NA coding downstream 9380 42454 ~ 46191 (+)
CI01000299_00053877_00063101 NA coding downstream 18877 51951 ~ 63500 (+)
CI01000299_00069742_00072011 NA coding downstream 36568 69642 ~ 72084 (+)
CI01000299_00082987_00089134 NA coding downstream 49649 82723 ~ 89594 (+)
CI01000299_00097393_00132755 NA coding downstream 64319 97393 ~ 132755 (+)
G403595 NA non-coding downstream 27345 60419 ~ 162795 (+)
G403952 NA non-coding downstream 517427 550501 ~ 550742 (+)
G403965 NA non-coding downstream 549682 582756 ~ 583123 (+)
G403971 NA non-coding downstream 569758 602832 ~ 603583 (+)
G404016 NA non-coding downstream 616341 649415 ~ 649814 (+)
G403578 NA other downstream 2388 35462 ~ 72271 (+)
G403609 NA other downstream 331065 364139 ~ 410788 (+)
G403972 NA other downstream 571796 604870 ~ 606350 (+)
G405609 NA other downstream 3121523 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 4098184 4131060 ~ 4133941 (+)

Expression


Co-expression Network