CI01000299_00053877_00063101


Basic Information

Item Value
gene id CI01000299_00053877_00063101
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 51951 ~ 63500 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_00053877_00063101.mRNA
GTATAAATAAAATTATAACACGCTGAATAATGACAGTTACTAAATTTACTAAGAATGATTATTATAGTTAAATAAAAACCTGGAAAAAAGATTTCCTCCATCAACGATGTCCATTGGGTTAACAATTACTCTTAGTTTGAAATATAAAACACCCAACATGTTCAGACATATTGGGGTTTCCATGTTTTATGCACGGTTTATGCAGACTTTTTTCTTTTTCTGTATAATCTGACCCCATCTATCACAGTAAACGTTTTTCATTTTTATATTCTCAAAACGTCATTTAGTATAAATTATAATTTGAAAAGTTGTTTTGCAAATGGGGATACATTTTGCTAGTTAAATAAAAAATATAAAAACATTTGCTTTTAGTTTATACTGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACCCACACAGACACACACACACACACACACACACACACAGGTTTCAAAAGTGAAAAACATTCTCTTCTTTTAAATGATTATAAAATAATTTATAAAATGTTATTTATAAAACAACTCACATTTTTCAGAGAGGAGCACTCCTTAACATGAATAGCAGAATGCAATAAAGTTGAAATCTAAAAAATCTCTCTCTCTCTCACACACACACACACACACACACACACACATTTCAAAAACTGAAAAACATTCTGTTCTTTTAAGGAAGATGGTGAGAACTGTAATCCTGTCACGTTTTTGTTTTGTAATGTACAAATGGGGAGGTAAACAATTACACGTAAGGTTAACGAATTGGAAAATCAATATACACCCAAATGAAATGTATGTGTTCACGTGCTCGCAAATGAATATATGTATGTGTATGAATTTACTTGCATTACTTGCACTAAGTATGTCACAGATTAAGTTTGTCAACTGGAATGTGAGGGGCATCAATTCACCAATTAAAAGAAATAAGATACTAAACTACCTTAAAAAACTAAATGCTGATATACAGGTGCTGGTCATATAATTAGAATATCATCAAAAAGTTGATTTATTTCACTAATTCCATTCAAAAAGTGAAAATTGTATATTATATTCATTCATTACACACAGACTGATATATTTCAAATGTTTATTTCTTTTAATTTTGATGATTATAACTGACAACTAAGGAAAATCCCAAATTCAGTATCTCAGAAAATTTGAATATTACTTTTTAAGACCAATAAGACCAATACAAAGAAAGGATTTTTAGAAATCTTGGCCAACCGAAAAGTATGAACAGCCTACCCTACCTTTAAGAACAAAGAAAGCAGCAGGTATATTGGTCTGCCGTCACTTTAAAAGCGAATGCATGGATCCAATAAACTGATAAACATTCTATTTTCTCCCAACTTTTTATGTTTACTTAATACATATGTTTATGTGGGTTTATGTGAATACTCACAAGCCCGGCAGTTTGACATATTTTTGCGTGTATTTGACCATTTAGGCAAGTTCACTTTGCTTGTCCTTGTACCACTCCATCTCAGAGCATGCACACAGAAAACTGCCTGAGGAACAGCCTGATATTGTACCCAAAAAGGCTTCATGTAAGCACCCTGCTTCCAAAGGTCCTCAAAGGAAAGGAAGAAAAAAAAATATATATATATATTTATATATCCCTTTTCAGCTTTCTTTTTAAAAAGTAGGTTTTTTTTTTTTTTAATAGCTTTTTAAAAGTTATCAACAAATCAGTTTTTTGCTTCGTCATTATGGGGTATAGAGTGTAGACTGATGTGAAAAGAAAAAGAATGGGTGTGGGCAGATTTAATTATGTATGAAAGCTTGCAAAAATGAAAGTGAAACTGAAATAGAGATTGAAATTCACTTGCAGTTAGATACAGTAACACAAGCCAGCTGTGTTCCAGGACAGAGCTGATATAAATATATCGAAGGAGGGGGAAAAAAAATGGAAATATTTAACCCAAATACAGAACCGGAACCAAATCCAGAACTGGATATACCATGGAGACACTTTGACTGGGGACAGAAAGAAGCTCTGAAAGAAAAGCTGGAAAACTTCTCTCCGAGTGATTCAGATGTAAACCACATCAAGATCCTGGTAGCTGGACAAGTTGGAGCAGGAATGTCCAGCTTTATCAACTCCATCGATAGTGTCTTTCAAGGACGGATCTCCTCTAGAGTGTTAGTTAGTTCTGCTGATGGTGACAGTCGTAGTTTCACACAAAAACTCACAGGATTCCCCATCAGAAGTGGGGAAAAATCTTTGCCCTTCGTCTTCATGGACACAAAGGGTTTACAACCTCCTGCGTTGGCTGGGTCACAAACAGATGACATCATCAATGCTGTGTTTGGCCATGTGAAGGACGGCTATAAAAGCCTTTACATTGCCTCTGCATTTGCTGTAGGGATTCCTCAAGTGGTTGTCATGACCAAAGTGGATGAAGCATGTCCGCTGGTCAACAAGGATCTAAGGAAGATCTACACTAGCAAGAAGATCAAAGAGAAGATGGAGTTGTGCAGCACCAAAGTAGGTGTGCCATTGTCAAACATCTTCCCAGTGAAGAACTACCACGAGGAGATTGACACAGAGGATGACATTGATGTTCTGATACTAAAGGCACTTGAACAGATTGTTCAGATTGCAGATGATAGATTGTTGGACAGGGAAATCTACTGACAAAATCACATATATACAGTTATTAATGCATATAAATCACATCATAAAATCACATATAATGCATTTGGAGTGGGTCATTTTCTTTATCAGAGGAACATCATTTTAGGAAGATTGTGAATTAAAATGACTATAAAGAGGATTATGTTTTGTGTTTAGTTTTCAAATATATCTACAGTCAGGTTCAAAGTCAATGAAAATCTGGGACTCAAAACTAATGTAAACCTGAAAATTAATAGAAAGATTCAGAAGTTGAAAATTGTTTAGGAAAAGTTATGTAAAATATTTCTACATTTAACAACATTAAAACTATTAAAATATATAAATAAATAATATGGGACTTTGTGTTTTAGATTCTTCAAAACATGAACAAAATAACTTTTGCTTATTGAGATCTGATGA

Function

NR:

description
LOC795887 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_00053877_00063101.mRNA True 3057 mRNA 0.34 7 51951 63500

Neighbor

gene id symbol gene type direction distance location
CI01000299_00042567_00045857 NA coding upstream 5760 42454 ~ 46191 (+)
CI01000299_00013442_00032151 NA coding upstream 18877 12783 ~ 33074 (+)
CI01000299_00005753_00010092 NA coding upstream 41726 5635 ~ 10225 (+)
CI01000299_00069742_00072011 NA coding downstream 6142 69642 ~ 72084 (+)
CI01000299_00082987_00089134 NA coding downstream 19223 82723 ~ 89594 (+)
CI01000299_00097393_00132755 NA coding downstream 33893 97393 ~ 132755 (+)
CI01000299_00151569_00153623 SLC5A3A coding downstream 88019 151519 ~ 154472 (+)
CI01000299_00255175_00294177 MBNL2 coding downstream 191675 255175 ~ 294177 (+)
G403952 NA non-coding downstream 487001 550501 ~ 550742 (+)
G403965 NA non-coding downstream 519256 582756 ~ 583123 (+)
G403971 NA non-coding downstream 539332 602832 ~ 603583 (+)
G404016 NA non-coding downstream 585915 649415 ~ 649814 (+)
G404137 NA non-coding downstream 1007108 1070608 ~ 1075893 (+)
G403609 NA other downstream 300639 364139 ~ 410788 (+)
G403972 NA other downstream 541370 604870 ~ 606350 (+)
G405609 NA other downstream 3091097 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 4067758 4131060 ~ 4133941 (+)
G405842 NA other downstream 4232033 4295533 ~ 4320141 (+)

Expression


Co-expression Network