CI01000299_00169255_00170695


Basic Information

Item Value
gene id CI01000299_00169255_00170695
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 169223 ~ 170986 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_00169255_00170695.mRNA
ACAAAATGTAGGAAAAAGCTTACATAAATGTTATTCCATCAAGGCCACCAAAAAAAATGAAAAGGTGCAAAAGAACTGCAGAGTGCAAAAAGTTTTCAGGTTCAACCCTTCGTCAAGCCACAAAAATATATTACAGAAAACACTTCAGGGAAAATTCCTTATTCTGACCCTGAGGTTATAAAGACTTCAAGTCAAAAATCCCTTTACAATCGCTCTGTAAAAGTCTATGTTCAATATTACCTCATCCTCAATGACGTATGATTTGTTTGATAACTATGTATATAAACTAAAATGTACCTGATTATAATTAGATGTCGAGAAATGAAACCAAGAACAACCATGCAGAGAAACCTTTACTACGGCTCGAGCAACAGCTCAAATGACAACTGCACCAACGTGGACGATGTCGTGAAGCGCTACTACTTGCCTGCCATGTACGGCACGATCTTCATCGTGGGCGTCGTGGGTAACGTCATCGCTCTGCTGGTCTACTTGCTCAAAGTTCGTCCCTGGAAGAGCAGCACCATCATCATGGTGAACCTCGTCATCACTGACCTTCTCTTCATGGTCAGCTTGCCCTTCTTGACCTACTACTACGTCCGCGACGACTCATGGACGCTGGGGATCGTCATGTGCCGCTTTGCGCGCTTCATGTTCCACTTCAACCTCTACGGCAGTATCCTCTTCCTCACCTGTCTTGCCATCTTCCGGTACGTGGCGATCGTGCATCCGTCGCACATGCACAGCATCAAGCAGAAGCGATGGGGCGTGTTGGCTTGCGTCCTGGTTTGGGCTGTGGCGGTGATCGAGTTAAGTCCCATTTTTAACCTGTTTGACATGGTTGAACAAAACAACAAGACATACTGCTTGGACTTGGCGAGCAGCAACCCAGGAATCATGTGGCCGTACAGTTGGGCATTGACCGTACTGGGATATTTGCTTCCTCTGGTCGTGGTCTGTCTTTGCTATTGGCGCATCATTGTGGTACTAAAGAAGGGTCCTCATATGGGAAGCATGAAACGGGTTCGAGCAAGGCGACTCATCGTGCTGATATTGACGTGCTTTGTGGTTTGCTTTTTTCCCTATCACGTGCTACGCGCTCTGAGAATCCACACGAGACTCACTCCGGAAACCGACTGCATGCTGGACCGCTGCGTTCACGCCGCCTACATTATTTCGAGGCCGATCGCTGTACTCAACATCATTTTCAACTTGCCGCTCTACACGTTGTCGGGGGATTGCTTTAAACAGGCCTTCGTGGAGCTGTTCAAATGTGATTGGCTCATGTCGAGGACTAAGGGGATCATTGAAGTGGCTGTGATCAGCAAATCCACGACCAACATCACAAACGAACAAAGCAGCTGAGACTCAAGCTGGTGTTTCAGTCTTCCACTAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_00169255_00170695.mRNA True 1397 mRNA 0.47 2 169223 170986

Neighbor

gene id symbol gene type direction distance location
CI01000299_00185106_00209299 NA coding upstream 13788 184774 ~ 209299 (-)
CI01000299_00448948_00449565 NA coding upstream 277877 448863 ~ 449757 (-)
CI01000299_00452374_00452868 NA coding upstream 280355 451341 ~ 452868 (-)
CI01000299_00670925_00672195 NA coding upstream 499694 670680 ~ 673625 (-)
CI01000299_01003547_01034507 NA coding upstream 832333 1003319 ~ 1034812 (-)
G403707 NA non-coding downstream 6307 60302 ~ 162916 (-)
G403737 NA non-coding upstream 63054 234040 ~ 234262 (-)
G403772 NA non-coding upstream 68551 239537 ~ 239755 (-)
G403738 NA non-coding upstream 69227 240213 ~ 240461 (-)
G403773 NA non-coding upstream 70164 241150 ~ 242770 (-)
G403774 NA non-coding upstream 71840 242826 ~ 243621 (-)
G404372 NA other upstream 899621 1070607 ~ 1075891 (-)
G404784 NA other upstream 1488669 1659655 ~ 1660000 (-)
G404976 NA other upstream 1684653 1855639 ~ 1880988 (-)
G405053 NA other upstream 1846701 2017687 ~ 2018050 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000941 oxgr1a.1 coding NC_007112.7 CM002885.2 2048047 ~ 2051599 (-)