CI01000299_00452374_00452868


Basic Information

Item Value
gene id CI01000299_00452374_00452868
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 451341 ~ 452868 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_00452374_00452868.mRNA
GTCATTTTTAGTGTCTTTTCCGCGGTGCACATGACTCAAATCTTCGTGTACGGGACACTAAAGAAAGGCCAGCCCAACTACTTCAGGATGACGGACCCTGCCAACGGTCGGGCCGAGTTTGTAGCTCACGCTCGCACAGTGGAGCGATACCCGCTCGTGATCGCCACCAAAGACAACTTCCCCTTCCTGCTCAACGTCCCTGGGAAGGGTCAGCGCGTCCAGGGCGAGATCTACAGCGTGGACCAGAAGATGCTGGAGTTCCTGGATGAGTTTGAAGAATGTCCAAAGTTGTACCAGCGCACAACTGTCCAGCTGGAGGTGCAGGACGGGCTCGGTGAAGGGGAAAACACGCTGAAGTCTGGAAGTTTCGTCAATGCCTCTGTGTACAGCACGACTACATATGAACCCGAGTGGCTCCAAAAACCAACATATGAGAGTTATGATGCTCACGGTGATCACGGGCTGTGTCCTGAAGACAGATGCTTTCTACTGTAGTAACATTTACCAGGGTTTTACCACACCTGCCAGTGTCACATGAATTTAATTTACCATTCAGACATTTTGAAAAAAAGAAGAAAAAAAAAAAAAGAAGAAAAAATATTTTCACCAAAAGGTGTGGTTTTGGTCATCTCATATTCACATTTCTCAGGGAATCTACCAGTCACAACAGAGTTTCACATGCTGATGTTGCAATTTTGGTTCCAAATATTTTAGCAAATTAATGAGAAAATAGAAGCTGGGGAGGGGGAGGGGAATCTTGAGTCGCCCTAGATCAACTTCTGACAGTACTGTATATTATCGGCTATGTAAAATGTTATCTGCAGATGTTTTAGATAATTTCTTTAGACATTATGCCATTTTAAATTGTGTGCTTTACATTTACACTTAAAACCGTTACTGGTTTTTTTTTAGTACTGGAAGCCCATTTTTAATTTTTTGGCACTTGACAAGTGTTATTTTAATGTGGTCAGATGGCATTATTAATTTGTTGCTGTGTTATATAAATATGATAGTCAGCCAGTACTGTGGTTTGTATGCTACAAACACACAAAACATTACCATGTTTATAGGGCACATCTATATATTCATATATGTATATACACTGTCATTCAAAAGTTTGGGATCAGTAAGATTTTTACTGTTTTTAAAATAAGTCTCTCACCAAGTCTGCATTTATTTAATAAAAAACAACAACAAAAAAACAGTAATATTGTGAAATAAGTACAATTTAAATAACTATTTTTCTATGTGAATATTTTTAAAAATGTAATTTATTCCTGTGATTTTTAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTGTAATATGCTGATTTGCTTCTCAGGAAACATTTCTGATTATTATCAGTGTTAAACTGTTGTGCTGTTTTTATTAAAATTTTTATTTTTCAGGATTCTTTAATGAATAGAAAGTTCAAAACAGCATTTATTTGAAATAGAATCTTTTGTAACATATGCTGTGGATGTTTTCTAAATTGCACTTTACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_00452374_00452868.mRNA True 1528 mRNA 0.37 1 451341 452868

Neighbor

gene id symbol gene type direction distance location
CI01000299_00448948_00449565 NA coding downstream 1584 448863 ~ 449757 (-)
CI01000299_00185106_00209299 NA coding downstream 242042 184774 ~ 209299 (-)
CI01000299_00169255_00170695 NA coding downstream 280355 169223 ~ 170986 (-)
CI01000299_00670925_00672195 NA coding upstream 217812 670680 ~ 673625 (-)
CI01000299_01003547_01034507 NA coding upstream 550451 1003319 ~ 1034812 (-)
CI01000299_01057889_01063623 NA coding upstream 604952 1057820 ~ 1063623 (-)
CI01000299_01114487_01122666 NA coding upstream 660882 1113750 ~ 1124230 (-)
CI01000299_01222994_01268707 NA coding upstream 769991 1222859 ~ 1270326 (-)
G403838 NA non-coding downstream 4862 444789 ~ 446479 (-)
G403841 NA non-coding downstream 12555 438309 ~ 438786 (-)
G403840 NA non-coding downstream 17752 433359 ~ 433589 (-)
G403858 NA non-coding downstream 21376 429635 ~ 429965 (-)
G403857 NA non-coding downstream 21912 428433 ~ 429429 (-)
G403866 NA non-coding upstream 13806 466674 ~ 466935 (-)
G403867 NA non-coding upstream 14282 467150 ~ 467350 (-)
G403874 NA non-coding upstream 25102 477970 ~ 478252 (-)
G403875 NA non-coding upstream 25676 478544 ~ 479150 (-)
G403913 NA non-coding upstream 72653 525521 ~ 525854 (-)
G404372 NA other upstream 617739 1070607 ~ 1075891 (-)
G404784 NA other upstream 1206787 1659655 ~ 1660000 (-)
G404976 NA other upstream 1402771 1855639 ~ 1880988 (-)
G405053 NA other upstream 1564819 2017687 ~ 2018050 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000947 ggact.3 coding NC_007112.7 CM002885.2 2446996 ~ 2453185 (-)