CI01000299_00689032_00727635


Basic Information

Item Value
gene id CI01000299_00689032_00727635
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 688906 ~ 727836 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_00689032_00727635.mRNA
TAATAAAAAGAAATGTATAGCAGTTGAAAAGTTGTTGCATAAGCCAGGCATTTAAAGGTAAATGGTTGAAAATTAAGAAAGAAAAAAAAAAAAAGATGTTATTGCATTTTGTTGAAAGATTACAAAATGACCCGTGCAATATGTAAATATGCTCCACCTGACTGGCTGCTGGAGCAAGGAACAATCTCAAGACCATTTCTAAAGCGTGATCAAAGTGGTCTGGCAAGCGTTCAAAGAACTTGGGACCCGAAACCGTCTGCCTTCGCTCCAAGACCTTTAATGTTTGCTTTGGCTGAATGTAGCTCGTCTGTCCTGTCACGCTCTTCTCTGAAGGATTCTTTGTATGGTGAGGTGCTGGAGGTGAACGGGCTGGCAGAGAGTCTCTCGGTGGGCCGCGGGACCCACCATATGGCAGCGGCCATATGCAGGAGATCCCTGTGGCCAGAAAAATACTCAAATCTGGGAATTCTAATTTCTGTGCAGAATCTCAGAGACACCGCTCATTGCTACTTTAGCACGTTGTGGGTGGTTTTTATAATGTGGTTGCTACTATTGTCCCTCGATCCACATGTGCCAGAAGCGCTTTGGCTTTGGTTTAGAGGCGATGCAGTGCTGGTCTGGCTGATTGCATGTTTAATCCAGCAGGTGTTGGGGAGATTTTTACTTGTGAAGTTGCGATGGTCGAGGTGGTTTAAGGTGGACCAGTGGTGCAGACGGACAGGTGAACATCTGCGGGTTTGTTCCCAAGGCTACACCTGCTGCACTTCAGACATGGAGGACAGACTCGGCCAGCAGGGTAAACTGGATTTCGAGAAATTAGTGGATGAAAGCAGCCGCACCATACGGACAGTATTTACCTCCAGACATAAAAAGTTTGACGAGACGGAGGCCGTGATACGACGTGTCATGCTGGAAGTTTCTAGTGGCTTGACTGTACGCCAACCCACAGTCATCTGTGACATAACAAAACCCTTCACGATGAATTACTGCCAGCTGATAACCTACATTATTTTCTCTGACAGCTCCAAGTCCACTCCAGTTGTGTTCTTCTGCCCACTTCTTAGAGAACTTGTTGAATCAGAAAGCCTTGGCTAACAGCTAACTCAAGAATTTTGCAAACCAGCACTGAGACTTTGATAAACATAGCTGGCCTATACTGCTGACAGTTTGTTAATTACACCGGAGAGCTGCTGGATCTGGGCATGGCGGTGATTATAGATGCTGTTTTGGGCCAAAGGAAAGGGAGAAATTTCATTAATAGCGAACAGAGCCATTAATATTTAAGTAATGCCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_00689032_00727635.mRNA True 1296 mRNA 0.45 8 688906 727836

Neighbor

gene id symbol gene type direction distance location
CI01000299_00419297_00444862 NA coding upstream 243018 419297 ~ 445888 (+)
CI01000299_00345042_00361660 KPNB3, IPO5.L, IPO5.S, IPO5 coding upstream 326820 345042 ~ 362086 (+)
CI01000299_00315123_00328550 RAP2B, RAP2C, RAP2A, RAP2AB, RAP2A.S coding upstream 358743 315123 ~ 330163 (+)
CI01000299_00255175_00294177 MBNL2 coding upstream 394729 255175 ~ 294177 (+)
CI01000299_00151569_00153623 SLC5A3A coding upstream 534434 151519 ~ 154472 (+)
CI01000299_00795673_00796901 GPC6 coding downstream 67837 795673 ~ 797157 (+)
CI01000299_00826470_00828773 NA coding downstream 98597 826433 ~ 828960 (+)
CI01000299_00862803_00911972 GPC6A, GPC6 coding downstream 134967 862803 ~ 911972 (+)
CI01000299_01036243_01046776 NA coding downstream 307201 1035037 ~ 1047603 (+)
CI01000299_01049508_01055558 NA coding downstream 321554 1049390 ~ 1055736 (+)
G404016 NA non-coding upstream 39092 649415 ~ 649814 (+)
G403971 NA non-coding upstream 85323 602832 ~ 603583 (+)
G403965 NA non-coding upstream 105783 582756 ~ 583123 (+)
G403952 NA non-coding upstream 138164 550501 ~ 550742 (+)
G403595 NA non-coding upstream 526111 60419 ~ 162795 (+)
G404137 NA non-coding downstream 342772 1070608 ~ 1075893 (+)
G404074 NA non-coding downstream 395743 1123579 ~ 1125274 (+)
G404075 NA non-coding downstream 397904 1125740 ~ 1127444 (+)
G404385 NA non-coding downstream 413520 1141356 ~ 1141636 (+)
G404424 NA non-coding downstream 467641 1195477 ~ 1195736 (+)
G403972 NA other upstream 82556 604870 ~ 606350 (+)
G403609 NA other upstream 278118 364139 ~ 410788 (+)
G403578 NA other upstream 616635 35462 ~ 72271 (+)
G405609 NA other downstream 2426761 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 3403422 4131060 ~ 4133941 (+)
G405842 NA other downstream 3567697 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 3761982 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 3974546 4703071 ~ 4704780 (+)

Expression


Co-expression Network