CI01000299_01003547_01034507


Basic Information

Item Value
gene id CI01000299_01003547_01034507
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 1003319 ~ 1034812 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_01003547_01034507.mRNA
ATTTACTTATTTCTCTTTATTTTGATTGTGGCTGTTTTAAGTTTGCATCACTGCATTTTTGCACAGAGAAAACTGAGGGATGGGTGTAAATTTCTCATTTGGTGATCAACAAAAATCATTTGCCATGCACAAACCAAATAATATGTGTGGTGCGTAATGATGCCATGAAGATGTTCATCCAGGTCCGGAAATCTCCCAGCTTGCCATGTTGAATAAACATTGTTGTGTCACAAATTCAATGCATATGTAAGTATTTCCACTGAGCCATTCAACGCCGTAGGAAGGGACTGGCAGCTAGGAAGGGGATGTTATCTGCGTCTAATGAAGAGCACTTGTGTGAGTGTGTTTCCGTGGTAACGGAATCACTCTTCCGTGATTGTCCACGTGAAAATGACTCCGTCGAGATGCCATGTGGAAACATAAATATGGACAGCAGACAGGACCAGCATATTGTGATGATTGGCACCCGCGAGTCACCTTTTACCCTTGAACGCGCTGTGGAGGGTCTCATTCGCTTGTCAGTTTGCTTTCGGATGCTGCTTCTTTGGAAAAGCAAACCTGGAGAAGCTATCACAGAAGTTCACGCAAAACCATGTCCCACCAGGCCTAAAGCAAGCAGTCGTTTAGTATCTGTTCAGCTAGACAGGAAACACAGAGCAAGGAGCACCGCCATGGGTTTGAAAGTTATTCAGATGAGTGTGTGGAAAGAGCTGGAATGGCTAAGTGACAGCCCTGAGCTAACACACCTCTTCTGCCTTAAGCTGGAATCAAAGCGGGAAGTAAAGCAGCAGAGGAGACAGCTCAGTGCTGTTGTGAGGGGCTTTTTGTCTCACATCCTCCATTCAGACACACCGCTGAGCTACACTCTGCGAGTGGTTGGCAACGGGATTAAAGCCCAGGCAGAAAACCCAGAAGTCAAAGTGAAGGAGGCCGACCCGGTGATCAATCAAGTCATTGATAAACTGAAGCACATCAATCAGCTGGTTAATTTGTACACCTCCAAAAAACATCCCAAAAAATTCCTTGATCCCTCACGTCCCAGAGCGGCCATCAGTTTCATGTGCTGTCAGCCCTGTTACCCCAAACGCCGGTGGCCCATATTGCATTTGCGTTGTGCTGTGAGGTCACGCTTGCATGGCATCCCTGGCATCCCTGGAGATGAATCCACTTCCTTTACAAATCAGCCTAATCCTGGAGGCGTCCCGTTCGGCCAGCGTTTGCCCCAAGGAGCCGCTAGATAAGCAGCCAGGAGTCCCGAGCTTCGACGTTTTTAATTACGACGAGATCTCATGAGATATGCAGGAAAGGGGGGGCGGCGTTGTAGGCTTTAAAATCGTGTCTCTCCAGCTGTTGTTTGCTGTCAAAGGTGGGGCTGGGACAAGACAGATAGCGGCCCTCCGAGACCCTGAGTGATTTAGGAGATACGTGACCAGAAAGGCCCTGTTAGCTTGCATTGGTGCTTATATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_01003547_01034507.mRNA True 1469 mRNA 0.48 5 1003319 1034812

Neighbor

gene id symbol gene type direction distance location
CI01000299_00670925_00672195 NA coding downstream 329694 670680 ~ 673625 (-)
CI01000299_00452374_00452868 NA coding downstream 550451 451341 ~ 452868 (-)
CI01000299_00448948_00449565 NA coding downstream 553562 448863 ~ 449757 (-)
CI01000299_00185106_00209299 NA coding downstream 794020 184774 ~ 209299 (-)
CI01000299_00169255_00170695 NA coding downstream 832333 169223 ~ 170986 (-)
CI01000299_01057889_01063623 NA coding upstream 23008 1057820 ~ 1063623 (-)
CI01000299_01114487_01122666 NA coding upstream 78938 1113750 ~ 1124230 (-)
CI01000299_01222994_01268707 NA coding upstream 188047 1222859 ~ 1270326 (-)
CI01000299_01338052_01368900 NA coding upstream 303060 1337872 ~ 1369376 (-)
CI01000299_01419938_01421048 NA coding upstream 384717 1419529 ~ 1421048 (-)
G404169 NA non-coding downstream 397737 605073 ~ 605582 (-)
G404168 NA non-coding downstream 402318 596568 ~ 601001 (-)
G404166 NA non-coding downstream 416972 586146 ~ 586347 (-)
G404162 NA non-coding downstream 447256 555853 ~ 556063 (-)
G404293 NA non-coding upstream 90924 1125736 ~ 1127433 (-)
G404380 NA non-coding upstream 96231 1131043 ~ 1131262 (-)
G404457 NA non-coding upstream 112644 1147456 ~ 1147727 (-)
G404484 NA non-coding upstream 162629 1197441 ~ 1198241 (-)
G404486 NA non-coding upstream 164545 1199357 ~ 1200671 (-)
G404372 NA other upstream 35795 1070607 ~ 1075891 (-)
G404784 NA other upstream 624843 1659655 ~ 1660000 (-)
G404976 NA other upstream 820827 1855639 ~ 1880988 (-)
G405053 NA other upstream 982875 2017687 ~ 2018050 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000951 gpc5a coding NC_007112.7 CM002885.2 3100244 ~ 3295045 (-)