CI01000299_01114487_01122666


Basic Information

Item Value
gene id CI01000299_01114487_01122666
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 1113750 ~ 1124230 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_01114487_01122666.mRNA
ATCCCTCTTAGCAAACATGCTTAATGCAGAGGGGTGGTCTAAATGCCTTTTTGTTGGTGGGTGCATATATAAATAAATTTTACTAATTTGAGGTTATTGGAAGAATTGTGTATGAGATGCATTTCATGTTTTTGGGTTGAGAAATACATGGCATCTAGTTAAAGTAGACATCATTTTTACTGTGTATTTTTAGCTGATGTTCTTATGAATGGAACATTACCATGGTGTCCAGCTCCTGTGTAGTGGTATGTAGGTTGGTTTTGTGTTGCCCACTGTAGAGATAAACAGTTCCTTCACTTTAAATAGAGAACATGTTCTCCTTATGAGTTTGAAATGAATTTGAGGTCTGTCCATAGGGAAGTGCAGCAGATCTGTAAGTTTTTAAAGCCTTTAAATATGCCTGATCTGATGAGTATTGTCTGTATGATTGTGTGACGCAACAGTATAGCATAATCACAATGAAATGAATTTTAAGATTATCATTAACATATCCCCTTATCTGCAATGAGGTATGACGTTTTCCCTGATTAAAGTAGCCTAGCCTATACTTTAGGAAGCACGTGAGTACTGTTCATATTTGTTTTATTATTTTTATAATATTAACTCAATGCCAACTCAAACTAGTTTCAGTATTTGTCCAATAGATGGCTCTATTGCAACCCATTTGAGAGACTCGCACGCACTTCTCTGAAAAAAAAAAAAAAAAAAAATGTTTTATTTCCACAATTTTTTTCCATTTCCAGTGTGGTTTATAGTCTTGGCAAGCTATTTGATTAAGCTTTCCATTAACAGTCCTCAAACTTAATTAAAACTATCAATGTAAACGTCTATAGGCCTACAATTTTACAGATATGCCTACATAGACTGCGTTCCTATGGACGTTTTTGGGGCACGTTAGAGGATTATTTAAAAAAAATATATAAATAAATTGGACGCCCCTAGCGCAGTAATAATTATGTGTTTGTAATGTGTAATTATACAATAACGTGATTAATAATGACAGTTCTTATGTCGATGTATCGTCCTAAACTTCAATCAAACAGCTGTTGCTATGGTTACCATCTCAAGCAAAAGCGATTTCTGTTGGCGAGCGCACTCTGACTAACTTATCGTAGAAAAAATATAAACTTACGTTTAGTCTTAATCAGAGGTCAAACACACCCATAGTTCGGAAAATGTTGCGACAAGACAAAACTACATAGTATATACTCTCCTTAAAGCTCTCGATATTGTAGCATAGCCTACTTGTCCGCTTCGCTGGTCGTGCAGATGGTGTGTTGAAGCGTCTCTTCTCTTTGCAGTCTGACAACACTAATGATTCCGCCCATTCTCTCTTGACAGCTCCGTCTTTCACCAACACACTCTCATTGCGCTCTTTTTGAAGGTCCTGCGCGAAACCCTCCCCTTGCGCTTATGTGTGACATGCAACATTTCTTGAATATATTTTTCTTCACCTAAAATCACTGCTGTTTTTTATCAAGGAAGTTTTCCGAGAGCTAAACGACACGCCCGCGTTTCTATTTTTTTACTCGAACGGACAAACTCTTCTGGTCAGCTTTTGGAGATGGAGATGCGTGGAGTTTTGGTTTATGCCTTTTTAGCGGTTTTCATCGATTCATGTCGGGGGACTTTAATGAACTGCGATGAAGTGCGTAAAGTTTTTCAAATGAAGCAAATTGGACCTGTAAAATCACTACCTGACATACCAAGAACAGGTTCAGATCTCCAGGTTTGTTTATCAAAGAATGTAACATGCTGCACCAAGAAGATGGAGGAACGTTACCAGGTGGCGGCACGACGGGACATCCAGAACCTTCTCCAGACATCCAGCTCAAGTCTGAAGTTCCTCATCTCACGGAATGTGGCTGCTTTTCAAGTTTATAAGCTTGGCAGGTTGCAGTGCTTTTGTTTGGTATGATGTCAGTTTGATTCCGGACATTTTACTGTTGTACAGTAAAGCATTACCACTGTATACTTTTCCCTGAGACCCAAAACATGTGATTTAGTTCCTGGTGGCTCTCCAAGGGCTTAATTCTGCAGCTTTTCAGTACATTTCAGGTTGACCAGTGTTCATTTAAGGCTTTTCAATTAATGGTTTCCTTGATGAGCTGTACACCAAGATGCTTGTTTTGAGGCCTTAATGAAACCCTTCACAGCTCCATAATGTCAGGTCATAGGAGCCTACGCACCTTTGTGGAGGAGGGTATCCCTCATTTGAACCAAATAACAAACCTGGATAACCTGTAATCTCACATAAGTGCTGATGCAAGAAGATGCACTCATCCTGACAAAAACCTCTCTATGTCGTCTACCGCAAATTCTCAGCAGAGGCTCGCTTTCAGGTTTCACAAAGATGGTTAGTCAGTCAGTGTGTAGCTAGCAGCTCATGATGGGTCGGTTCACTGTGAGTGTGTCGAGATCTTGGATTGCTGCAAATGTGCCAGGAGAGTGAAGATTAAGAGTCTCCATTACAGAAGAAGTGAAGTGTCACTTTTTACGCTGACTTTGAGAGTCATGCAGGTTTTTGCTTGAGTGAGGTGATGCTTCATAATATATCTTAATCAGCTGATATTGATAGTCGATCATTATTTTCATTGATAACCAATACAATAGTCATTATTATAAATCTGTACTTGCCTACAAAAGGCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_01114487_01122666.mRNA True 2655 mRNA 0.39 3 1113750 1124230

Neighbor

gene id symbol gene type direction distance location
CI01000299_01057889_01063623 NA coding downstream 50127 1057820 ~ 1063623 (-)
CI01000299_01003547_01034507 NA coding downstream 78938 1003319 ~ 1034812 (-)
CI01000299_00670925_00672195 NA coding downstream 440125 670680 ~ 673625 (-)
CI01000299_00452374_00452868 NA coding downstream 660882 451341 ~ 452868 (-)
CI01000299_00448948_00449565 NA coding downstream 663993 448863 ~ 449757 (-)
CI01000299_01222994_01268707 NA coding upstream 98629 1222859 ~ 1270326 (-)
CI01000299_01338052_01368900 NA coding upstream 213642 1337872 ~ 1369376 (-)
CI01000299_01419938_01421048 NA coding upstream 295299 1419529 ~ 1421048 (-)
CI01000299_01693958_01696561 SLITRK5 coding upstream 568694 1692924 ~ 1697305 (-)
CI01000299_02670695_02682116 NA coding upstream 1546366 2670596 ~ 2682116 (-)
G404169 NA non-coding downstream 508168 605073 ~ 605582 (-)
G404168 NA non-coding downstream 512749 596568 ~ 601001 (-)
G404166 NA non-coding downstream 527403 586146 ~ 586347 (-)
G404162 NA non-coding downstream 557687 555853 ~ 556063 (-)
G404293 NA non-coding upstream 1506 1125736 ~ 1127433 (-)
G404380 NA non-coding upstream 6813 1131043 ~ 1131262 (-)
G404457 NA non-coding upstream 23226 1147456 ~ 1147727 (-)
G404484 NA non-coding upstream 73211 1197441 ~ 1198241 (-)
G404486 NA non-coding upstream 75127 1199357 ~ 1200671 (-)
G404372 NA other downstream 37859 1070607 ~ 1075891 (-)
G404784 NA other upstream 535425 1659655 ~ 1660000 (-)
G404976 NA other upstream 731409 1855639 ~ 1880988 (-)
G405053 NA other upstream 893457 2017687 ~ 2018050 (-)
G407413 NA other upstream 3351764 4475994 ~ 4550721 (-)

Expression


Co-expression Network