CI01000299_01139684_01147241


Basic Information

Item Value
gene id CI01000299_01139684_01147241
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 1139497 ~ 1147248 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_01139684_01147241.mRNA
CTATAAAAAGGCAAAATTTGATATGCATGAGCATGACACATAAGTCCAGTTCTCTCTTTCAGATTCGTGGGCCAAAAAAGGTTGAGAACTAGAGGCCGCCTACAAGATTTGATCATGAACAAATCACCTCAAAAGTTCTCCCACTACTTTCTGCTTTAGATATTTTACTCATTTGACCGAGGGAATAATGAGGACTATTCAAATGAATCTCTTCATCACACTGGAGCCAATTAAAGTGGTTAATCGGGGGCCGACGACTGCCAAATTAAAGGAGATTGCAAATGTTAAACAGTATGATTGGAAATGTGCTGCCGGAGGAAAAATCCAGAGGATTTTCAATTTGAAAATCCAGTTTGGTCTGCCTTTCTACTGTGAGCATGATGCAAGATTCTGCAACGTTCCTGGCAATATCACCTGGAGAACTGAAGAGCGACAGGATGTGTCTTCCTCACTGGCAGGCGCAAGACAAATGATGCTTTTCCCTTTCGCGTCACCTCAGTGCCACTATACCATCTCCTCTGCATTGAAAACATTTTTTGTTACCCTTCACTTGGTGAATGTAATTGAGAAGCAGCCACGATGCAGTCGTGTCTCCAAATCGGAGTCTATTTCACTGGGCTTGCAATTTACGGTCCTTCGAGAGAAGATACCTTTATCAATATCCTATCCTCTGTATTCAGTGCCTTTTTTCGTATACACACCCTTCTGTAAAATCAAAGGAAACCGACTTTTAGCTGTTGCACTAAATTCTTCTAGTGTTTGCTGTGATCCTGCATGCAGCTTTAATCAGGACACCGTTGATGCACAGATCTTCCCTCCGCTGTCTTTAGGGATTTGTCCCCAGGCCCGGTTTGAAGGAGTGACCAAGAGACAGCTCATTTATCTCCCGACAAAAGAAAGCCATCTCACATTCACCCCAGCCCAAATAAAATCCCCCTTAGGCTGGAATTACATATTGATTTGATATAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_01139684_01147241.mRNA True 971 mRNA 0.43 5 1139497 1147248

Neighbor

gene id symbol gene type direction distance location
CI01000299_01049508_01055558 NA coding upstream 83761 1049390 ~ 1055736 (+)
CI01000299_01036243_01046776 NA coding upstream 91894 1035037 ~ 1047603 (+)
CI01000299_00862803_00911972 GPC6A, GPC6 coding upstream 227525 862803 ~ 911972 (+)
CI01000299_00826470_00828773 NA coding upstream 310537 826433 ~ 828960 (+)
CI01000299_00795673_00796901 GPC6 coding upstream 342340 795673 ~ 797157 (+)
CI01000299_01197545_01215711 NA coding downstream 50174 1197422 ~ 1215989 (+)
CI01000299_01855614_01858092 SLITRK6 coding downstream 708366 1855614 ~ 1858703 (+)
CI01000299_02118245_02120332 SLITRK1 coding downstream 969613 2116861 ~ 2121858 (+)
CI01000299_02195854_02198465 NA coding downstream 1048550 2195798 ~ 2198925 (+)
CI01000299_02612562_02613926 NA coding downstream 1465251 2612499 ~ 2614792 (+)
G404075 NA non-coding upstream 12053 1125740 ~ 1127444 (+)
G404074 NA non-coding upstream 14223 1123579 ~ 1125274 (+)
G404137 NA non-coding upstream 63604 1070608 ~ 1075893 (+)
G404016 NA non-coding upstream 489683 649415 ~ 649814 (+)
G403971 NA non-coding upstream 535914 602832 ~ 603583 (+)
G404424 NA non-coding downstream 48229 1195477 ~ 1195736 (+)
G404436 NA non-coding downstream 64407 1211655 ~ 1211871 (+)
G404544 NA non-coding downstream 169028 1316276 ~ 1316603 (+)
G404603 NA non-coding downstream 256509 1403757 ~ 1404012 (+)
G403972 NA other upstream 533147 604870 ~ 606350 (+)
G403609 NA other upstream 728709 364139 ~ 410788 (+)
G403578 NA other upstream 1067226 35462 ~ 72271 (+)
G405609 NA other downstream 2007349 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 2984010 4131060 ~ 4133941 (+)
G405842 NA other downstream 3148285 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 3342570 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 3555134 4703071 ~ 4704780 (+)

Expression


Co-expression Network