CI01000299_01222994_01268707


Basic Information

Item Value
gene id CI01000299_01222994_01268707
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 1222859 ~ 1270326 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_01222994_01268707.mRNA
ATGACTCTTTACTCACTAATTTACTAAATTTCTTTGAAATTGCATTCATTTTGTATTCCCAGTATAGAATAATTAACGGCATTTGTATTGTTTTATGTTTTTAACATTTCAAAATGAAATCTAAAATCACACTATTTACTTTCATAATACTGTAACGTGCTATGTTTTAGTTTCGTTTTCACTCTGTTTGCTCTGTTCCTATTCTCCTTAGTTCCTAGTTAGTTTCCCTGTTTGTTAATTAGTTTCCATAGTTCCTGATTCCACGCACCTGTTCTGTTTCTGCTTTGATACATTCTCTTTTACTTTTTCTGAGTATATAAGCCCTGAGTTTCCCTAGTTCCTTTGTCCGATATTGTTTGTAACTAAGTGGTGGTTCTAAAATTTATCTCCTGAGTGTTCTGTTTAAAGTAATTAAATACTATTGATTAGTCTTTCAATTCCTGTGCTGTGCGCATTCTCTACAACACCCATGTTACAAATACCTGTTTCTGGTGTTGTGTAAAAGGATTAGTGTAAACTTTTTGTAAAAAGAATTGTGGTTTACATTACATCATGCAATGTCAAGTCAAGCATATTGCATTGTGAGATATAATATTCTGTACATTTTGGGTGATAAATTTAGACAAATAACTTTTTGTCTTCTCCTAAAGAATAATGACACCTACACCATGCAAACTATCAAGTAATGTTAATGTTAACCCATAGCCAAATATTTAGTCATTGTTTTAGGCTACTGTTGAAAATAATCTATTTCTAAATCTTAGGTTTCTTGATTATCCATACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATCATTTTAAAATGTGAGAGACATTGGGCTTTTGAGGAACGTTTATTTGTTCATCTCCCAATTATCATTGCATTACATCCTTTGTTTTCCCCCGACAATGAAAACAGAGCAAAGCATTAAAATATCATCTTACTAAGACATATTACTGTGAGGTAGATATAGAGTTAAAACCATGAATATGCAAATTAGTCCCCACCTCCACTCTATCACACAGGACTACCTGACCCACTCGATCAGCTGTAGTAAATGCTATACAATGGCAAGTGGAAATATTGGTTTAATTCATCCATATGTGTTTGAAACAGAAACTAATTGAGAAGAAGAAGAGAAAGAGCAAATCAGGGTCACCTACAAGTTGATGTATCAGAATGGTAATGTGTTTAAGTATTGCTCTCTACAACATCAGACATATGATTACCCTTTGGCATTATCAAACAGCTAATAATGTGTTGCTAACATTACACAAACCATGTTCCCATTTGTCATGAGTCAGACAGCTGCCTTCTAAAAATCAGCATGCTTAGAAATACTTTGAACATCATAGAAAGTCCCAAAAGCCCCGCCCCGCACGTTGATGGGATTGGTTACATGTTTGACGGAAGGAAACGGGCAAAGTACGTTTTTGACTGCAGTTTTAAGGAGAAAATACTCAGCAATGGTATTGACTGATGAATTCGCACATGGTTTGTCTTAAAGCATATTAAAAACACCACGTAGACATATAAACAACATTAAAAACTTGATTTTCACCACAGGGAGTCTTTAACTCCATTGGTGACATAATCTGGTGGCCCTAAAATGAAGCTTCACTCTACTTCATCTGACCTGATGGTATATTTCAAAGGAAATACTGCAGCAGAGGTGACGACATGTCAACGGTGCTCGAGAAACCCCCTCGTATGCATAGCGTCTCATTGTGAGTTCCTGCTGCCCGTGCGAGATTTGAGACGACAGAACACGAGTACAAGGTTTTCCTTTAAGTTAATATACTTCAGATTTGTTATAGCTTTACCATGGGATCATTTGCACAGAGGGGATGATCAACCCGAATGTCAAAGAAAGTCTCCAAATCAGGCACTGGATCTGAGGCTTCCAGATGATGTTTCACCTCCCCGAAGAGCAGATGTCTTGGCAGTTGCATCTTCACGCCCAAAAAGTTTGGTTTTTATGGGTCACATGTACAGCATGATCTTTTGCATCGTAACAGATGGCTTCCCTGAACACCGTCCTCCTCTCAAATACGTCTGCAGCTATTTGGATGGAGATCCCAAAAGCCCACTCATCCAAATGGAAGTTGCTGCAACCATATTTCCAGGCCAGGCGCTGATATATTTTTCTCGGCGGAGGGCGCCTGGGTCCGCACATCCATCACGCAGTGGCTATTTTCAGGGCGGCCGCACTCCTCGATCATTCTCCCGTAGTAATGCGAGTCAGAAGACATCAGTGGGTGTAATGGCGTGCTCCAGTTGGCCCCCACCATCCCGCGCCTCTCGCAGATGCGCTCTGGCACTAAAGGGACGACACAGATACGCTTACATCTTTTACGATGATGTCGTTCTTCTGTTCGACATCTGTGTTACGACCCTCTTCCGGGCTGCAGAGAGAGTCCGAAGTCATCCGTGCCCACTTCCCTGAAATTGTACTACGTGAATTATTGCTAACATATACTTCACTGTTGGCATCAAATGCTGGCATTTCTTTGAAAGAGGGGGCAAAATGCCATTCCAGGAGAAAAAAAAAGAGACTCTGCCCGAAAAGAGCGATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_01222994_01268707.mRNA True 2591 mRNA 0.39 6 1222859 1270326

Neighbor

gene id symbol gene type direction distance location
CI01000299_01114487_01122666 NA coding downstream 98629 1113750 ~ 1124230 (-)
CI01000299_01057889_01063623 NA coding downstream 159236 1057820 ~ 1063623 (-)
CI01000299_01003547_01034507 NA coding downstream 188047 1003319 ~ 1034812 (-)
CI01000299_00670925_00672195 NA coding downstream 549234 670680 ~ 673625 (-)
CI01000299_00452374_00452868 NA coding downstream 769991 451341 ~ 452868 (-)
CI01000299_01338052_01368900 NA coding upstream 67546 1337872 ~ 1369376 (-)
CI01000299_01419938_01421048 NA coding upstream 149203 1419529 ~ 1421048 (-)
CI01000299_01693958_01696561 SLITRK5 coding upstream 422598 1692924 ~ 1697305 (-)
CI01000299_02670695_02682116 NA coding upstream 1400270 2670596 ~ 2682116 (-)
CI01000299_02723315_02728716 MNX2B coding upstream 1452894 2723220 ~ 2728753 (-)
G404493 NA non-coding downstream 10929 1211707 ~ 1211930 (-)
G404486 NA non-coding downstream 22188 1199357 ~ 1200671 (-)
G404484 NA non-coding downstream 24618 1197441 ~ 1198241 (-)
G404457 NA non-coding downstream 75132 1147456 ~ 1147727 (-)
G404380 NA non-coding downstream 91597 1131043 ~ 1131262 (-)
G404541 NA non-coding upstream 39228 1309554 ~ 1309772 (-)
G404604 NA non-coding upstream 133588 1403914 ~ 1404355 (-)
G404669 NA non-coding upstream 196515 1466841 ~ 1500623 (-)
G404771 NA non-coding upstream 333974 1604300 ~ 1604628 (-)
G404772 NA non-coding upstream 334384 1604710 ~ 1605108 (-)
G404372 NA other downstream 146968 1070607 ~ 1075891 (-)
G404784 NA other upstream 389329 1659655 ~ 1660000 (-)
G404976 NA other upstream 585313 1855639 ~ 1880988 (-)
G405053 NA other upstream 747361 2017687 ~ 2018050 (-)
G407413 NA other upstream 3205668 4475994 ~ 4550721 (-)

Expression


Co-expression Network