CI01000299_02195854_02198465


Basic Information

Item Value
gene id CI01000299_02195854_02198465
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2195798 ~ 2198925 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_02195854_02198465.mRNA
ATATAAAAATTTATGTATTTGTGAGCTGCGTGATATGCAAATATTCTATCCAGCCAATGAGCGAAGCTGGAGCCATTTTGAAGCGTGATGTGGTGAAGACAGCGAGTACTCTGTCAGTCCAATGCTGTCTGCGGAAATACACAGAGAAGTTGATTCAGTGTTTAATGGTGTACATCTCTGACAATGCTGATAATCTCATCAGGCATTACCAGGATAGCCATGGTGACCTAAAGGAACTGGAACAGCACACACTGAGGATTATCACAAAGGTGGCTTCATGGACGATCCTTTAGAGACTGTAACTTTCTTTTGGTCAAATTGTCACTTTTTTCAGAAGTACTACAGTCATGATTTTTGGTTTTAGACTATTTAAGTTGCTGTTTCCAGAGTAGTATTGCAATCTCTGTCAGAAAACCTAAAATGCTTTATTTTTGTACTGATTTTACTAATTGTGTGAAAACCTTTTGTTGAAATGCTGTCCAAAAATTAGGTAAAATGCTTGTTTTGTGTTTATTGTATGTTTTGTACTTATTTTAAGACATTGAATGTTCTAGAGCAGTACAGTAAGTTTTATTCAATAGCTCAAGGTCTAAAATTAATTAAAATTTTAAGTTTGTTCAACTTAGTTTACTGTCTTTTTTAATGTAAATTAGCTTAAATGTTAAGTTAACACAACTTGCTATTACTTGGTAAATTCAACTTGTGTTTTTAAGTAAAGAATGTTGAGTAAACAAATATATTTAAGTACCTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_02195854_02198465.mRNA True 753 mRNA 0.33 3 2195798 2198925

Neighbor

gene id symbol gene type direction distance location
CI01000299_02118245_02120332 SLITRK1 coding upstream 73940 2116861 ~ 2121858 (+)
CI01000299_01855614_01858092 SLITRK6 coding upstream 337095 1855614 ~ 1858703 (+)
CI01000299_01197545_01215711 NA coding upstream 979809 1197422 ~ 1215989 (+)
CI01000299_01139684_01147241 NA coding upstream 1048550 1139497 ~ 1147248 (+)
CI01000299_01049508_01055558 NA coding upstream 1140062 1049390 ~ 1055736 (+)
CI01000299_02612562_02613926 NA coding downstream 413574 2612499 ~ 2614792 (+)
CI01000299_02696797_02704180 TUBA1C, TUBA1B, TUBA1A, TUBA8L2, TUBA4B.S, TUBA4A, TUBA4B coding downstream 497707 2696632 ~ 2704220 (+)
CI01000299_02706136_02711943 STK16 coding downstream 506948 2705873 ~ 2713740 (+)
CI01000299_02753238_02760499 PUR9, ATIC coding downstream 554313 2753238 ~ 2760953 (+)
CI01000299_02813216_02818668 CPO coding downstream 614216 2813141 ~ 2819096 (+)
G405099 NA non-coding upstream 87845 2107716 ~ 2107953 (+)
G405095 NA non-coding upstream 106266 2089207 ~ 2089532 (+)
G405088 NA non-coding upstream 114288 2081250 ~ 2081510 (+)
G405066 NA non-coding upstream 165831 2029613 ~ 2029967 (+)
G405059 NA non-coding upstream 170805 2024788 ~ 2024993 (+)
G405297 NA non-coding downstream 332408 2531333 ~ 2531597 (+)
G405314 NA non-coding downstream 379163 2578088 ~ 2578375 (+)
G405332 NA non-coding downstream 392502 2591427 ~ 2591654 (+)
G405343 NA non-coding downstream 423027 2621952 ~ 2622265 (+)
G405345 NA non-coding downstream 427103 2626028 ~ 2626240 (+)
G403972 NA other upstream 1589448 604870 ~ 606350 (+)
G403609 NA other upstream 1785010 364139 ~ 410788 (+)
G403578 NA other upstream 2123527 35462 ~ 72271 (+)
G405609 NA other downstream 955672 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 1932333 4131060 ~ 4133941 (+)
G405842 NA other downstream 2096608 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 2290893 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 2503457 4703071 ~ 4704780 (+)

Expression


Co-expression Network