CI01000299_02670695_02682116


Basic Information

Item Value
gene id CI01000299_02670695_02682116
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2670596 ~ 2682116 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_02670695_02682116.mRNA
TCTTAGTCATAACACAGATAAGATGTACCATTTATCTCCAGTCTGATATAGTTCTTCTAACAGACCATTGCAAACCACTTGAGATGCTTGCTTTGTCCCTGAGGATAGCAGAGTTGAACCTTAGAGCGTTGACCTTTGCAAAGACTTTGTGGCTCTCAGCCGTGTCGGGAGGCCTTGGATATTATCAGTTGCACAATGAGGACGACCCCTCCGAAGGGGCCGCCGGCGCCGAGCCGTCCACATCCTCCCAGGCCACTGCCGCTGTGTTAGGCATCAGCAACCCCGTGGTGGATACAGAAGCTCCGCCTCCTCCTTATGCTAGTGTGGCGCTCGGAGCTACCGCTGCACCAGAAAGCACATTTCCGGGGGAATTTCCCGTTCCTCCACCATACAGCGTTGCCACGTCTCTGCCCACTTACGATGAGGCAGAGAAGGCTAAAGCAGCAGCCATGGCTGCCTCGGCGGTGGAGAACAAAACTCCAAGTCCTCGATTCGCACAACTTTCCACTGCAGCTTTGGTAGAGTCCAAATCATTCCCTCAAAGGAAAGATGCTGTAGTAGTGCTGGATGAGGATTTTCCGGTTCGGGATGACTTCAGTGACGCTGATCAGCTGAGGGTGGGAAATGATGGAATCTTCATGCTGGCCTTCTTCATGGCTTTTCTTTTCAACTGGATCGGGTTTTGCTTGTCTTTCTGTTTGACCAACACCATTGCTGGCCGATATGGTGCCATCTGCGGCTTTGGCCTCTCTCTCATCAAGTGGATCCTCATTGTGAGGTTTTCAGATTACTTTACTGGATACTTCAATGGGCAGTACTGGCTCTGGTGGATTTTCCTCGTTCTTGGACTCCTGCTGTTCTTCAGAGGGTTTGTGAACTACCTAAAAGTGCGTAACATGTCAGAAAGCATGGTGTCTTCACTCCGAACTCGCTTCTTCCTCCTCTATTAAAGGTGAGGATATTGTTAAACAAACACATACACATATACACACACAAATGACAGTGTAATTATTTAGGTTTGATTTTATTCATTATGATTGATTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_02670695_02682116.mRNA True 1049 mRNA 0.48 9 2670596 2682116

Neighbor

gene id symbol gene type direction distance location
CI01000299_01693958_01696561 SLITRK5 coding downstream 973291 1692924 ~ 1697305 (-)
CI01000299_01419938_01421048 NA coding downstream 1249548 1419529 ~ 1421048 (-)
CI01000299_01338052_01368900 NA coding downstream 1301220 1337872 ~ 1369376 (-)
CI01000299_01222994_01268707 NA coding downstream 1400270 1222859 ~ 1270326 (-)
CI01000299_01114487_01122666 NA coding downstream 1546366 1113750 ~ 1124230 (-)
CI01000299_02723315_02728716 MNX2B coding upstream 41104 2723220 ~ 2728753 (-)
CI01000299_02761916_02788258 FN1B coding upstream 79298 2761414 ~ 2788437 (-)
CI01000299_02833341_02845817 NA coding upstream 150974 2833090 ~ 2845870 (-)
CI01000299_02850281_02876863 NRP2A, NRP2 coding upstream 168165 2850281 ~ 2876863 (-)
CI01000299_02891830_02905146 NRP2B, NRP2A, NRP2 coding upstream 209458 2891574 ~ 2905146 (-)
G406715 NA non-coding downstream 138588 2531792 ~ 2532008 (-)
G406551 NA non-coding downstream 575240 2095043 ~ 2095356 (-)
G406539 NA non-coding downstream 612710 2057670 ~ 2057886 (-)
G405068 NA non-coding downstream 640159 2030201 ~ 2030437 (-)
G405067 NA non-coding downstream 640545 2029605 ~ 2030051 (-)
G406630 NA non-coding upstream 23405 2705521 ~ 2706692 (-)
G406772 NA non-coding upstream 38097 2720213 ~ 2720548 (-)
G406779 NA non-coding upstream 147101 2829217 ~ 2829455 (-)
G406786 NA non-coding upstream 239194 2921310 ~ 2922385 (-)
G406790 NA non-coding upstream 247224 2929340 ~ 2929549 (-)
G405053 NA other downstream 652546 2017687 ~ 2018050 (-)
G404976 NA other downstream 789608 1855639 ~ 1880988 (-)
G404784 NA other downstream 1010596 1659655 ~ 1660000 (-)
G404372 NA other downstream 1594705 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 1997740 670680 ~ 673625 (-)
G407413 NA other upstream 1793878 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 2243852 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 2759221 5427661 ~ 5443433 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location