CI01000299_02753238_02760499 (PUR9, ATIC)


Basic Information

Item Value
gene id CI01000299_02753238_02760499
gene name PUR9, ATIC
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2753238 ~ 2760953 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_02753238_02760499.mRNA
CACTGCTGAGTGTGTCCGATAAGACCGGACTGGTGGAGTTTGCCAAGCGGCTGGTCTCAGTGGGTCTGTCATTAGTGGCTTCAGGAGGCACCGCCAAAACTCTCAGAGATGCTGGACTCACTGTCAGGGATGTATCTGAGCTCACTGGATTTCCTGAGATGCTTGGAGGAAGAGTCAAGACCCTTCATCCCGCTGTCCATGGTGGCATTTTGGCCAGACAAACTCCCTCTGATAAGGCTGACATGGAAAAACTAGGGTTTAGTCTTGTCAGAGTGGCTGTGTGCAACCTTTACCCGTTTGTGAAGACTGTTGCGTCCCCCAGTGTGACCGTGGAAGACGCTGTTGAGCAGATTGACATCGCCTGTGTGAGATTCACTCCAATTTCACCATTAATCTCACAATCATATTTAGGTGGAGTTACTCTTCTTCGAGCAGCAGCGAAGAATCACGCCAGAGTCACTGTAGTCTGTGATCCGTCCGACTACGATGTTGTTGCCAAGGAAATGGAATCTTCCGACAACCATGATACTACAGTGGAAACACGCAAAACTCTTGCACTCAAGGCCTTCACACACACTGCTCACTATGACGAGGCCATCTCTGATTACTTCAGACGTGAATACAGTCGAGGAATTTCCCAGCTGCCCTTGCGGTACGGCATGAATCCCCATCAAGCTCCTGCTCAGCTCTACACTATACGCCCAGCACTTCCACTTTCCGTGCTGAATGGATCTCCAGGCTTCATTAACCTGTGTGACGCTCTGAACGCCTGGCAGCTGGTGAGAGAGTTGAAGAGAGCTCTTGGTTTGCCAGCCGCCACTTCATTTAAACACGTCAGCCCTGCAGGAGCTGCAGTTGGCGTCCCATTGAGTGAAGACGAGGCCAAGGTGTGTATGGTGAATGACATGCTCCAGGACCTCACCCCTCTCGCCACTGCATATGCCAGAGCCAGAGGTTCTGACAGGATGTCCTCCTTTGGAGATTTCATCGCTTTGTCTGACATCTGTGACGTCCCAACTGCCAAGATCATCTCCAGAGAGATGGATCCTGACTATGAGCCTGATGATGAGGAGGTGAGGGTTTTGTTTGGTTTGTACCTCAAACAGAAGAGGAATGGAGCCGTCATTGATAAAGAGCTCTTCAGCAACATTGTGTCAAAGGGCAAGCTCTCTGAGAGTGCTCTTCGAGACCTGATTGTAGCCAGTATTGCAGTGAAGTACACTCAGTCCAACTCTGTGTGTTATGCAAAGGATGGACAGGTGATTGGCATCGGCGCTGGGCAGCAGTCTCGTATCCACTGCACTCGGCTGGCCGGAGACAAGGCTGATAACTGGTGGCTCAGGCACCATCCCAGAGTGCTCAATATGAAATTCCGCAGCGGAGTTAAGCGTGCAGAGATGGCTAATGCCATTGATCAGTATGTCAGCGGAACAATTGGAGAGGGTCCAGATATGGAGGTTTGGAAGAGTCTGTTTGAGGAGATTCCTGAGCCTCTGTCAGAGGTGGAGAAGAAGAACTGGATCAGTTCTCTGCAGGCTGTGGCCCTCAGCTCTGATGCTTTCTTCCCCTTCCGGGACAACGTTGACCGTGCCAAACGGAGTGGTGTGGAGTATATTGCCGCCCCCTCTGGCTCTACTGCTGATGAGGTGGTCATCAACGCCTGCAATGAGCTGGGCATTTCCCTGGTGCACACCAACATCCGTCTTTTCCATCACTGAAAAACACTTCAAAACATCCAGTTGAATACAAATATCCAACTAGCTTTACTGTTACAAAAGTTTAGGGTTTCTTTCTTTTTAGATGTACATCATTTACTGTAATTCCAAGTTGCTTACCCATATGTCATAACTTAGCCCAATGGATAATTGCTAGTCTGTCCACTTTAACTCAATAGTTTAAATGTTAGAATTTTGTCACGTTTCTATTTTTACTTGAATCCTAAAGCCAACAGCAAAGTGTTTTTTTTTGCTGCAAAATATTCTTCACATATGGCTTCTTTAATACTGACACACTAAGAATTATTTCATTTAATTGCAAAGAAAACACATTACATAATTTCCTTTTAATATGTCCTTTTTTTTTCCTCTTCAACATTTCTAATATGAAATTGTCTCCATACACTTCCTGATGCATTCCATTGTGCTGCCTCAAGTGTCTCGTGAGCATTACAAA

Function

symbol description
atic Predicted to enable IMP cyclohydrolase activity and phosphoribosylaminoimidazolecarboxamide formyltransferase activity. Predicted to be involved in 'de novo' IMP biosynthetic process. Predicted to act upstream of or within purine nucleotide biosynthetic process. Predicted to be active in cytosol. Is expressed in several structures, including digestive system; immature eye; nervous system; neural crest; and yolk. Human ortholog(s) of this gene implicated in purine-pyrimidine metabolic disorder. Orthologous to human ATIC (5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase).

GO:

id name namespace
GO:0003937 IMP cyclohydrolase activity molecular_function

KEGG:

id description
K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_02753238_02760499.mRNA True 2172 mRNA 0.47 13 2753238 2760953

Neighbor

gene id symbol gene type direction distance location
CI01000299_02706136_02711943 STK16 coding upstream 39498 2705873 ~ 2713740 (+)
CI01000299_02696797_02704180 TUBA1C, TUBA1B, TUBA1A, TUBA8L2, TUBA4B.S, TUBA4A, TUBA4B coding upstream 49018 2696632 ~ 2704220 (+)
CI01000299_02612562_02613926 NA coding upstream 138446 2612499 ~ 2614792 (+)
CI01000299_02195854_02198465 NA coding upstream 554313 2195798 ~ 2198925 (+)
CI01000299_02118245_02120332 SLITRK1 coding upstream 631380 2116861 ~ 2121858 (+)
CI01000299_02813216_02818668 CPO coding downstream 52188 2813141 ~ 2819096 (+)
CI01000299_03144958_03149338 NA coding downstream 383437 3144390 ~ 3149340 (+)
CI01000299_03157191_03166687 ABCB6, ABCB6A coding downstream 396238 3157191 ~ 3166701 (+)
CI01000299_03170577_03174986 CNPPD1 coding downstream 409624 3170577 ~ 3175003 (+)
CI01000299_03176677_03185710 PRKAG3A coding downstream 415724 3176677 ~ 3186067 (+)
G405390 NA non-coding upstream 22729 2730273 ~ 2730509 (+)
G405385 NA non-coding upstream 31914 2720862 ~ 2721324 (+)
G405329 NA non-coding upstream 38097 2659354 ~ 2715141 (+)
G405366 NA non-coding upstream 97825 2655180 ~ 2655413 (+)
G405365 NA non-coding upstream 99622 2653406 ~ 2653616 (+)
G405407 NA non-coding downstream 49499 2810452 ~ 2810672 (+)
G405611 NA non-coding downstream 447973 3208926 ~ 3209411 (+)
G405618 NA non-coding downstream 559571 3320524 ~ 3321012 (+)
G405619 NA non-coding downstream 560242 3321195 ~ 3321433 (+)
G405621 NA non-coding downstream 573274 3334227 ~ 3335205 (+)
G403972 NA other upstream 2146888 604870 ~ 606350 (+)
G403609 NA other upstream 2342450 364139 ~ 410788 (+)
G403578 NA other upstream 2680967 35462 ~ 72271 (+)
G405609 NA other downstream 393644 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 1370305 4131060 ~ 4133941 (+)
G405842 NA other downstream 1534580 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1728865 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1941429 4703071 ~ 4704780 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00001266 atic,pur9,LOC106575709 coding CM030137.1 CM030137.1 22085991 ~ 22103093 (-)