CI01000299_02833341_02845817



Basic Information


Item Value
gene id CI01000299_02833341_02845817
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2833090 ~ 2845870 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000299_02833341_02845817.mRNA
TCTCCCTAATGAGTGGCTCAGTCATGCTCCGTGGCTGAATATAGCATAACAAGATGTCTGCCTGTGCCGGGTTCTGCTCAGATGGCAGCATTGCATCAGAGACTCAGGGGGGAGCCCTACCTGGCAAGAGTGAGCCAACAATAGATACCCTGTCAGTACCGGCTGTTTTGCCCAACTGGTATTACATAATGGCTGGTGGAGGAGCCATCTTGTTCCTGGTTATTGTCATTGTCATGGCCGTTAGCTGTCGCCATCTTACGGCCAGGAGGAACCAACCCACAATGGCCTACTACAGCCCACACAGTGCACATTACCCAAACGGCGGCGTGCACAGGTCTGGGTATCTAGGTTATTCCTTTGTATCTCGCATTTCTCACATTTTTTTCCCCAAAGATCCCCAAAACTGCGTTGGCGTGTGTTATTCTGAGCAAACGCTTGCTGGTGTTGAGGCTCCAAAAACAAGTCCCATAAACAAAGACAGCTGTTTCCTTTCTCCGACGTTTCCATGTGATGAGGAAGCACTGAGCGCTGGGGTGGGAGAGAACTTTGTGCAGATATCAACACCTGTTAAAAAGCCAACGGTTGGAAATGGGCGTCTCTTTAATGGGAAAGACCATATAAATGCAGGTTTCCAGTTTCCAGAGTGGAGCACAGCCGAAACGCCATCAGAGCCTCCGGTGACACATGTGGTCGATAAGGACAACGCATGGCTGTACTCTCTGGACCCCATTCTCCTGACCATCATCGTCATGAGCTCTCTGGGTGTTCTTCTAGGTGCCGTGTGTGCCGGCCTCCTCCTTTACTGCACCTGCTCATATGGCGGCTTGACGTCACGCTCGTCCACCACCTTGGAGAACTACAACTTTGAGTTGTACGACGGGATTAAGCACAAAAGACGAGCCTCATCTCTTAGTATTCCTGGAATGCATGTCCATCTCAGCTGGAGAGCTCCTAGACCGAACTTCTCCTGGAGCTTATTTTCCAAGCAGTCATGCTTACTCAGCTCTAGCGCTGCTGCCAAGGACTTCCTCGTCTTTCACTGGATTACATCAAAAATGGAGCATTTGAGAAGTTCAGTAGCCCAGGATGATTATACGTCATCATTATTGTGTGTTTACAACCCATTGCTTTCAGCCCACCATTTTGTGTTTCTCTTGTCAGTTTGGAAATGGAAAAGTTTTATGTTAACAGGAGACAGGTTTGGTTGTAAATCTGCTCCCCTGTGGTTTTCAAAGACTGGCAAAAGGTGGAAGACAGATGCCGTAAATCTTTACTTACTTGCTCAGATGGGATTCCTCACCTTCATTCATGCTCAAAAACAGATTGTTGGACTACGTCTGCTACAGTTTCTCTCATCTCCCCATGGGCTCCCATTAGCACGGACCTTCAGTCGCCTTCATTTAGGGGCTCACAACATCAAAGCTTTGAAGTGCCTAACTGTTCCACCCCCTAAAGTTCCCTTCATCCCTCCACCTCATCCAACCACCCAGTTGCATCCATTTAACTATTTCTCTACCTCAGCTTTCTCTCTGCTCCATAGTGTGCCTGCCTTTGCCTTTACCACTGTGGCTTTTTCACTGACTAATGATGTGTACAGTAAGATCTAGTAAGGTCGATCGAATCAGCCTTGTTCGAGATCCCAAGAAAATCAAAGACATTATTATGGCAGGCAAATAAAATATTGAATAGACTTTAAAAAAAAACACCATCAAACATAAACCTATAACTGTCCTACAGCCATCCGTTTTACAATCAGGTTTGTCCATCTGAAACTATTTTAAGTTTTTCTTCAGTATCATAAGAACCACGTAAAAAAACTGAAATACTCATTGCCGTTCTTTCATCTTAAATGAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000299_02833341_02845817.mRNA True 1858 mRNA 0.46 9 2833090 2845870

Neighbor


gene id symbol gene type direction distance location
CI01000299_02761916_02788258 FN1B coding downstream 44653 2761414 ~ 2788437 (-)
CI01000299_02723315_02728716 MNX2B coding downstream 104337 2723220 ~ 2728753 (-)
CI01000299_02670695_02682116 NA coding downstream 150974 2670596 ~ 2682116 (-)
CI01000299_01693958_01696561 SLITRK5 coding downstream 1135785 1692924 ~ 1697305 (-)
CI01000299_01419938_01421048 NA coding downstream 1412042 1419529 ~ 1421048 (-)
CI01000299_02850281_02876863 NRP2A, NRP2 coding upstream 4411 2850281 ~ 2876863 (-)
CI01000299_02891830_02905146 NRP2B, NRP2A, NRP2 coding upstream 45704 2891574 ~ 2905146 (-)
CI01000299_02951402_03057288 PARD3BA coding upstream 105532 2951402 ~ 3057288 (-)
CI01000299_03104921_03106385 NA coding upstream 258735 3104605 ~ 3106385 (-)
CI01000299_03206204_03214303 MDH1B coding upstream 360315 3206185 ~ 3214303 (-)
G406779 NA non-coding downstream 3635 2829217 ~ 2829455 (-)
G406772 NA non-coding downstream 112542 2720213 ~ 2720548 (-)
G406630 NA non-coding downstream 126398 2705521 ~ 2706692 (-)
G406715 NA non-coding downstream 301082 2531792 ~ 2532008 (-)
G406551 NA non-coding downstream 737734 2095043 ~ 2095356 (-)
G406786 NA non-coding upstream 75440 2921310 ~ 2922385 (-)
G406790 NA non-coding upstream 83470 2929340 ~ 2929549 (-)
G406842 NA non-coding upstream 211836 3057706 ~ 3058006 (-)
G406868 NA non-coding upstream 275127 3120997 ~ 3121253 (-)
G406884 NA non-coding upstream 308730 3154600 ~ 3155118 (-)
G405053 NA other downstream 815040 2017687 ~ 2018050 (-)
G404976 NA other downstream 952102 1855639 ~ 1880988 (-)
G404784 NA other downstream 1173090 1659655 ~ 1660000 (-)
G404372 NA other downstream 1757199 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 2160234 670680 ~ 673625 (-)
G407413 NA other upstream 1630124 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 2080098 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 2595467 5427661 ~ 5443433 (-)

Expression



Co-expression Network