CI01000299_03144958_03149338


Basic Information

Item Value
gene id CI01000299_03144958_03149338
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3144390 ~ 3149340 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03144958_03149338.mRNA
GTATAAAATAACTGCTTTTTTTTTACAGGATCATACTTCTAATATACATCACATTTATATATCGTATGATATATATTAAATACATTTTCTGGTGAAAACCCATGTTCAAAAATATAAATATATGTCTATATTTCAAATAAATGAATCTCATTTTTTTATGCAAGTATAAAAGTAAATTTTTTTTTAATATTAATACAAATTATATATCATATTTTAATTAAAAAAAAATTAAGGCAATGTTTTCTGATGAAACCAGTTCATTTTTTTTTTTTTTTTTTTCATAATGATGACAGTACTATTGTTAAATATAGTTTTAAATACATTTTAAATACATTTCCTCACGTTGTCATCATGTGATAAGATGAAAATATTAACATTGGGAAACTACTATGTGAATTTGTCAGCAGTAAAATAGAACTCTGCAGCATTTGATTGGCATGGGCTGGAGGGAAATTTAAAGGGGCGGAGTCAAATTTGAACCTGACCATTCCAACCAATCAACATTAAAGAGTGATAGGGAGTCGTTAAATCCTCTGAGCACTCAGAGGAATGTCTTGAGAGACCAACAATGGGAAGAAGTTCAGTGGTTATTGATTTTATAATTATAGTTTCATGTGGATTACTGTGTTGTGCTGAACAATTGAACTTATGGGAACAATCTTTAGACCAGGGCTCGAGTCAAAATGCCGTCTTCAGACAGCCAATGCCAGCGCAAGGGCCTGATCAAAGTGCGTTAGGCTTCGCACCCAACATGTTTCAAAACCTTATTGAATCCAGGGGACCTGCACCTGTAGCTCCTTGGAGACCTGCCCCAGCATTGGGGCAAGAGCTACCAATGCAAGCACAATCCCAGAGAACCAACTACGCACCTGTTCCCCTTCAACCTAGCCAGCCTTTGCGAAGCCAAGTGAATTTTGGACTAATAAAACCTGAGCAAACGGTTGAGACGTTCTCACAAACCCAACAGGGATTCCAGAAGCCCATTCCAGGTCCTGATCTCTATCCTGACCTCAAGGATGAGTTGGTTATGGGGCCAGAGTTTGTACCCAAGGTGCCAGAGCCAGCAAACACCGTGGAGGTTCATTGTGATGAGGTCTCTGTCAATGTGCAGGTGAAGCAAGATTTCTTGGGAAACAATCAGTTCATCAACCCCTCTGATCTGACGCTGGGTGGTTGTCCATCTGTTGGATTTGATGACCATGCCAGGATTGTTGCTTTTCAATCAGAGCTACAAGGATGTGGAAGCACACTAACGATGACTGAAGATTCACTTGTTTATTCCTTTGTTTTGGTGTATTCACCTTCACCTCTTCCTAACACGCCTATTGTGAAGACAAATGAAGCTATGGTTGCAATTCATTGCATCTACCCAAGGAAACACAATGTGAGTAGTAATGCATTGCATCCCAACTGGATTCCCTATGCTGCAGCGAGAGCTGGCGAAGAATATTTACACTTTTCCCTTAAGCTCATGACTGATGACTGGAGGTATGAGCGACCCTCTAACGCCTACTTTCTGGGAGATTTCATAAACCTGGAAGCCTCAGTGGTCCGTGCTAATCACGTTCCCCTGCGGGTGTTTGTGGAAAGCTGCGCAGCTACTTTGGGCCCCAGCGGGGAAACCACCACCGTCTACACGTTCATCGAGAACAGCGGATGCATGGTGGATGCCAAGCTGACAAATTCCAGATCCAAGTTCATGCCCAGGATGCAGGATGACAAGTTACAATTTCAGATAGAGGCATTCAGATTTAACCAAGATTCCCGTGGATTGATCTACATCACTTGTCATTTAAAGGCTACTACAACATCCAGTCCCATTGATATTATGAACAAGGCCTGCTCATTTGTTAAAGAAACAAACAGCTGGACTGCTGCAAACGGAGACAATCAGGTGTGTGGCTGTTGTGAGACCAGCTGTTCCATGAGAAAGGGCAGAAGTCTGGATTCTGATGATTCCATGTTGGAAGATGAGGCTACTATTGGGCCGATTATTGTCCAGGAGCCACAACCAATGGAGGAAGAGCCTTTACTGCAAATTGAAGAGTCTTCTCAGGTGTCATCGAAAGATGCAGAGTACTCCATCGAGTTGGTGCTCATGACTGCTTTGGTGGTCACCGTTGTAATCTTGTGTGTCATTATCCTTGGAACGTTGTTTTACCAAAGACGTCAGAAACTGCCTGTGCTGACTTGTGAATGAGA

Function

NR:

description
egg envelope glycoprotein ZP3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03144958_03149338.mRNA True 2202 mRNA 0.42 9 3144390 3149340

Neighbor

gene id symbol gene type direction distance location
CI01000299_02813216_02818668 CPO coding upstream 325294 2813141 ~ 2819096 (+)
CI01000299_02753238_02760499 PUR9, ATIC coding upstream 383437 2753238 ~ 2760953 (+)
CI01000299_02706136_02711943 STK16 coding upstream 430650 2705873 ~ 2713740 (+)
CI01000299_02696797_02704180 TUBA1C, TUBA1B, TUBA1A, TUBA8L2, TUBA4B.S, TUBA4A, TUBA4B coding upstream 440170 2696632 ~ 2704220 (+)
CI01000299_02612562_02613926 NA coding upstream 529598 2612499 ~ 2614792 (+)
CI01000299_03157191_03166687 ABCB6, ABCB6A coding downstream 7851 3157191 ~ 3166701 (+)
CI01000299_03170577_03174986 CNPPD1 coding downstream 21237 3170577 ~ 3175003 (+)
CI01000299_03176677_03185710 PRKAG3A coding downstream 27337 3176677 ~ 3186067 (+)
CI01000299_03189537_03200831 FAM134A coding downstream 39979 3189319 ~ 3201406 (+)
CI01000299_03215678_03230586 NA coding downstream 66338 3215678 ~ 3230586 (+)
G405407 NA non-coding upstream 333718 2810452 ~ 2810672 (+)
G405390 NA non-coding upstream 413881 2730273 ~ 2730509 (+)
G405385 NA non-coding upstream 423066 2720862 ~ 2721324 (+)
G405329 NA non-coding upstream 429249 2659354 ~ 2715141 (+)
G405366 NA non-coding upstream 488977 2655180 ~ 2655413 (+)
G405611 NA non-coding downstream 59586 3208926 ~ 3209411 (+)
G405618 NA non-coding downstream 171184 3320524 ~ 3321012 (+)
G405619 NA non-coding downstream 171855 3321195 ~ 3321433 (+)
G405621 NA non-coding downstream 184887 3334227 ~ 3335205 (+)
G405660 NA non-coding downstream 257245 3406585 ~ 3406810 (+)
G403972 NA other upstream 2538040 604870 ~ 606350 (+)
G403609 NA other upstream 2733602 364139 ~ 410788 (+)
G403578 NA other upstream 3072119 35462 ~ 72271 (+)
G405609 NA other downstream 5257 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 981918 4131060 ~ 4133941 (+)
G405842 NA other downstream 1146193 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1340478 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1553042 4703071 ~ 4704780 (+)

Expression


Co-expression Network