CI01000299_03176677_03185710 (PRKAG3A)


Basic Information

Item Value
gene id CI01000299_03176677_03185710
gene name PRKAG3A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3176677 ~ 3186067 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03176677_03185710.mRNA
ATGTGCACGGAGAAGCTCGGCAGTAGTGCACACGCACAAATGGACACTGGCACGCAGGACGTTTGCCATGAGGACTATATAATGAACAGCACAGACCCCGATCCGAATGCAGAAGCTTATATGAACTTCATGAAGAAACACTGCTGTTATGATGCGATTCCCACCAGCTGCAAACTGGTCATTTTTGACACCACACTGCAGGTGAAGAAGGCCTTCTTTGCTCTGGTTGCGAACGGCCTGAGAGCGGCCCCTCTCTGGGACAACAAACTGCAGAGGTTTGTGGGTATGCTGACAATCACAGATTTTATCAATATTCTTCATCGGTATTACAAGTCACCTATGACGTCTATCTGCAATATCACGATCAATATCTCATCAGTATCACACCTGATGCGAGGTATTAAAAACTTACAGGCACACTTTGAGTTTTGTAGGTGGTGTCAGGGTTACAGCCTCTTTGATGCCGTCTACTCTTTACTGAAACACAAAATCCACAGGCTGCCGGTCATCGACCCAGAGTCTGGAAATGTCCTTCACATACTGACCCATAAGAGAATCCTCAAGTTCCTTCATTTATTTGAAGCCTCAGTGCCCAAGCCACGCTTCTTGAAGATGCAAATTAAAGATGCAGGAATAGGAACTTTCACAGACATAGCCACAGTCTCACAGACGGCCACTGTGTACGATGCACTTTCTGTGTTTGTCGAGCGACGCGTGTCCGCTCTCCCAGTGGTGGATGACGATGGCAAGGTGGTTGCCCTGTATTCCAGATTTGATGTGATTAATCTTGCAGCGCAGAAAACCTACAATAACCTGAGCATGAGCATGCAGGAGGCGGTGCGGAGGAGGCGCTGTTATGTGGAAGGAGTCATTAAATGCTATCCTGATGAGACTTTGGAAACTGTTATTGACAGAATAGTCAAGGCAGAGGTCCATAGGCTGGTGCTTGTGGACAGAGATGACGTGGTTCGGGGAATAATCTCTCTCTCAGACCTGCTGCAGGCCATAGTCTTATCTCCAGCAGGTATTGATGCTCTGTTTTCCTAACCTGAGAGGATATGTTTTCTGCTGTTCCCTCATCTAACCAACACTAGTGTCCAGGTAGGCTTTACTCTGCCTTCCCAGCCTAGCTTTGCCAACACATGCATTGCTACTGCATACGGTTCTAGTCAAAGGTTTGCACACACCTACTCATTCTTTATTCTTTACGACTGTTTTCTACATCAACTAAAGTCATCAAAAGTATAAAATAACATGCATGGAATTATGTAGTGATCAAAAAATGTTAAACAAATCAGAATTATCTTTTATCTGAGGTGCATCATGGGTTGTTTGACACACTATTGAAGGCGTTCATTTGTTGATGCTTTTCCTTCACTGTCCACTCCAGTTAATTTATTTGGA

Function

symbol description
prkag3a Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in cellular response to glucose starvation; protein phosphorylation; and regulation of catalytic activity. Predicted to be part of nucleotide-activated protein kinase complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human PRKAG3 (protein kinase AMP-activated non-catalytic subunit gamma 3).

NR:

description
Zgc:136850

GO: NA

KEGG:

id description
K07200 PRKAG; 5'-AMP-activated protein kinase, regulatory gamma subunit

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03176677_03185710.mRNA True 1404 mRNA 0.45 11 3176677 3186067

Neighbor

gene id symbol gene type direction distance location
CI01000299_03170577_03174986 CNPPD1 coding upstream 1674 3170577 ~ 3175003 (+)
CI01000299_03157191_03166687 ABCB6, ABCB6A coding upstream 9976 3157191 ~ 3166701 (+)
CI01000299_03144958_03149338 NA coding upstream 27337 3144390 ~ 3149340 (+)
CI01000299_02813216_02818668 CPO coding upstream 357581 2813141 ~ 2819096 (+)
CI01000299_02753238_02760499 PUR9, ATIC coding upstream 415724 2753238 ~ 2760953 (+)
CI01000299_03189537_03200831 FAM134A coding downstream 3252 3189319 ~ 3201406 (+)
CI01000299_03215678_03230586 NA coding downstream 29611 3215678 ~ 3230586 (+)
CI01000299_03237334_03244737 GTF3C3 coding downstream 51267 3237334 ~ 3244815 (+)
CI01000299_03267154_03267336 NA coding downstream 81087 3267154 ~ 3267391 (+)
CI01000299_03268500_03312490 HECW2 coding downstream 82126 3268193 ~ 3313328 (+)
G405407 NA non-coding upstream 366005 2810452 ~ 2810672 (+)
G405390 NA non-coding upstream 446168 2730273 ~ 2730509 (+)
G405385 NA non-coding upstream 455353 2720862 ~ 2721324 (+)
G405329 NA non-coding upstream 461536 2659354 ~ 2715141 (+)
G405366 NA non-coding upstream 521264 2655180 ~ 2655413 (+)
G405611 NA non-coding downstream 22859 3208926 ~ 3209411 (+)
G405618 NA non-coding downstream 134457 3320524 ~ 3321012 (+)
G405619 NA non-coding downstream 135128 3321195 ~ 3321433 (+)
G405621 NA non-coding downstream 148160 3334227 ~ 3335205 (+)
G405660 NA non-coding downstream 220518 3406585 ~ 3406810 (+)
G405609 NA other upstream 21503 3154597 ~ 3155174 (+)
G403972 NA other upstream 2570327 604870 ~ 606350 (+)
G403609 NA other upstream 2765889 364139 ~ 410788 (+)
G403578 NA other upstream 3104406 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 945191 4131060 ~ 4133941 (+)
G405842 NA other downstream 1109466 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1303751 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1516315 4703071 ~ 4704780 (+)
G406096 NA other downstream 1738395 4924462 ~ 4927844 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location