CI01000299_03215678_03230586


Basic Information

Item Value
gene id CI01000299_03215678_03230586
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3215678 ~ 3230586 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03215678_03230586.mRNA
ATGAGCATGTATAAATCAGGTTTGGAGATGCTCAGATGTACTCTGAGATCCACGCCGCTGTGGAAATATGACTCTTTTATATGGACACAGACGTCTTTGTGTTATAAAAGCAGAAACTTTGCTGCGTCATCTCAGTTTGGGAGAAAACACATACAAGGACACACATTAAAACAAGTCCGGTATTACTGTCAGAGTGGTCATGATGTTCTTAATGCTCAGATTAAACAAACTCCAGCTTCTACAAAGACCAGTGAACTCCTGGATAAGGCAGAAAGGACTCCTTTCTACAGCCATTTGCAGAACTGTTATTGTCCCACGGATGTGCTGGACACGCTGAAGCAGTTCCCAGTGTCGCAGCAGCTCATCAGCAGCATCTTCACACGCATCTGGGAGAGCACGAAGAAAATGACGGATGAGCAGCGGCGTTGTGAGCTGCGGCTGATGTTCGATCACCCGGGGTTTGAGGAGGTCTGTGAACGGGCCACGACTGACGCTTGGCGCATGAGGAGTGAGGATCTGGCCTACACTCTGCTGGCCATTGTCAACCTGGGAGTTTCACAAGACACGCATGTTGTCCAGACGCTGCTGCGTGTTATACAGGAACGGCTGAATCAGTTTGATATAAGGTCTCTTTCGGTGTTGGCTGCCTGTATTCGGGAGATGGAGAACGGTAGGAATGTTCAGGCCCTAAGAGAGGCTTTAAGGTTGTTGCTAAAGGATCGTATTCCTGAGATCCAGAGCGTGGTTGTCCTGCAGAGCATGATGCGTGCGGTGGGCAAAAACTCTCCGATACATCTGAAGAAACAGCTGGCGACAAAGACTCTGTCGTTGGCAGATGAGTTTAGTCCACCCAACACCCAGTACATGTTCTCCAGCCTGGCTGCCATGGGCCTGAACTTCAAACCTCTGCTGGATGTCTGCAGCAAGAACATAGCTGAAAACGTGCATGAATTCCCCTTCGGTAAGCTTCTGTCTGTGCTGAAATCCTGCCATGAGCTTCGCTACAGAAACTACACCCTCTTCAGCTCTGTCTCCGAGTACATGACCAACACATTTGATATGTGGTCCAACAAACAGGTGATTCTCATTCTGGTATCATTTGAGGATCTCTTGTTCAGACCTGTGGTCCTGTTGGATGCATTTGCAGAGAGAATCATCCAGAAGCCTGACAGTCTGACTCTGAAAGACCTTCTTAGTGTTTTAAAAGTGTTTTCGCTCCTCAATCATGACCTGAAAGAGAAAAAAACAGAGTTTCTGTCCAGTGTGGTGAAGGTCTTAGAGTCCTACCTTCCAAAGATGTCCCCCACCGACCTGCTGAAAGCCGTTTACTATCTGGCATTGCTGGAGCACATCCCTCAAACCCTACTGGATAAACTGCTACAGCAGGAAACCCTGGACCAAATACAGAAAGGAAAACAGTTGAATAAGGTTCAGAGGTGGCTGCACACGTTGGATCTCTGTTTGCGTCTGGATCAACCTCAGCTGCCGCCCTCCCTGAGGTCTATCCCAGACCTCAACTTCACAGTTCCTGCTCATGACGTCCCAGTCAACCAGGAAATGCTCAGTGCGATCAGGAGCATTGTGGGAAATGATGCTGTTCAGGACAGTGTGCTGGAGCAGAGCATCTACTTCATTGACTGTGTGATTACTCTGCCTCATCCCAAAGAAGAAACCTGTGGCCTCCGTGCAGAGGATTCTGGGTCACCTGAATGTGCCCGAAGGATTGCAGTGGTCTGCGCTCCACCGACTTCATTTTGCTTTGGTACAACACATCCTCGAGCCAGCTTGGTCATCAAACTTCGGCATCTTGAAAAACTTGGTTATAAACCTGTTTTGGATGAGAAGGGAGATGTGTCAGATGATGATGAGGATGAAACTGCTGATCAGGAGGATCCTGTTCCGTCCACTTCAAAACGATGTGCTAGAGAAGCACGAAAACGCCAAACAGGTGGATATTACATGACATTACAAGGGTACGATTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03215678_03230586.mRNA True 1983 mRNA 0.48 11 3215678 3230586

Neighbor

gene id symbol gene type direction distance location
CI01000299_03189537_03200831 FAM134A coding upstream 14272 3189319 ~ 3201406 (+)
CI01000299_03176677_03185710 PRKAG3A coding upstream 29611 3176677 ~ 3186067 (+)
CI01000299_03170577_03174986 CNPPD1 coding upstream 40675 3170577 ~ 3175003 (+)
CI01000299_03157191_03166687 ABCB6, ABCB6A coding upstream 48977 3157191 ~ 3166701 (+)
CI01000299_03144958_03149338 NA coding upstream 66338 3144390 ~ 3149340 (+)
CI01000299_03237334_03244737 GTF3C3 coding downstream 6748 3237334 ~ 3244815 (+)
CI01000299_03267154_03267336 NA coding downstream 36568 3267154 ~ 3267391 (+)
CI01000299_03268500_03312490 HECW2 coding downstream 37607 3268193 ~ 3313328 (+)
CI01000299_03366963_03373293 NA coding downstream 136232 3366818 ~ 3373682 (+)
CI01000299_03382616_03423028 NA coding downstream 151905 3382491 ~ 3423697 (+)
G405611 NA non-coding upstream 6267 3208926 ~ 3209411 (+)
G405407 NA non-coding upstream 405006 2810452 ~ 2810672 (+)
G405390 NA non-coding upstream 485169 2730273 ~ 2730509 (+)
G405385 NA non-coding upstream 494354 2720862 ~ 2721324 (+)
G405329 NA non-coding upstream 500537 2659354 ~ 2715141 (+)
G405618 NA non-coding downstream 89938 3320524 ~ 3321012 (+)
G405619 NA non-coding downstream 90609 3321195 ~ 3321433 (+)
G405621 NA non-coding downstream 103641 3334227 ~ 3335205 (+)
G405660 NA non-coding downstream 175999 3406585 ~ 3406810 (+)
G405663 NA non-coding downstream 179948 3410534 ~ 3410764 (+)
G405609 NA other upstream 60504 3154597 ~ 3155174 (+)
G403972 NA other upstream 2609328 604870 ~ 606350 (+)
G403609 NA other upstream 2804890 364139 ~ 410788 (+)
G403578 NA other upstream 3143407 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 900672 4131060 ~ 4133941 (+)
G405842 NA other downstream 1064947 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1259232 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1471796 4703071 ~ 4704780 (+)
G406096 NA other downstream 1693876 4924462 ~ 4927844 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location