CI01000299_03268500_03312490 (HECW2)


Basic Information

Item Value
gene id CI01000299_03268500_03312490
gene name HECW2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3268193 ~ 3313328 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03268500_03312490.mRNA
TTATAAATTTCTGAAGTCAAATTTATATATTAATCATATTAGATGCCGCCTCCATTTCCAGAGAACTTAAGGAAGGGGAAAACTTCCGCCAACTAGGGCTTCTTGAGCCCAAACCCAATCCCAACCCCTTCACCCCCTTTTTGGCCATTTGGCTCCTATTTCTTACCTCCATCTCATCCCGACCTCCACCATTCGCCCCTCGCTGGCCACGGCAGTCCTCCCTCCCCGTTCCCGCCCCCACCCTCCCACTTCTCATCACCCAACCCCTTCCCCACACCACACTTCCCACCCCTCCACCCAAGTCACCATGGCAACCGGCACAACCACCACCGCCCGTGAACATCTCCTAGTGGTGCGGAGGCGCACCCCGCACATGCGCTACACGTTGAGCCCGGAAAACCTCCGCAGCCTTTCGTCACAGGGTGGTTCTGGGAATGTGGGGAGCTCTAGAGGAGGAGCTCCTGAACCGATGGGCCTGCAGCGGGCCAACAGTGACACCGACCTGGTGACGTCGGATAGCCGTTCCTCCTTAACAGCCTCTACATACCAGTTCACACTCGGGCGAGGGCAAAACCTGGTCATCTCTTGGGACATCAAGGAGGAGGTGGATGCCACTGACTGGATTGGGCTGTACCATATCGGTAAGATGTTTTGGGGTGTGGGGAAACTCTCTATTGAAAATGATGAAATATATTACTTTTTAGGAAGGGGTTTATTTTTATCTGGTAACTTAAAGAGACAGTTTGTCCTGAATCAGAGGGCGGAAAGGAGAAAAAGATTGTGTCACAGAGAGATAATCAGCGATGAGACGTGTCCCGCTAACGTTTGGGATTCGAAGAACCGCGGGGTGAACGGCACTCAGAGGGGGCAGATCGTCTGGAGGCTTGAGGCCGGACCGTACTTCATGGAGCCTGAGACCAAAATCTGTTTCAAATATTACCATGGAGTGAGTGGAGCGCTGAGGGCCACAACCCCCTGCATCACTGTCAGCAACCCTGGAGTCACAGTCGGGACAGAAGGACAGGTGGATGGACAGTCTGTCACTGAACACTGCAGGAAATTGGTCAGCTTTACTCTATCAGATATCAGGGCTCAGGGTCTGAAGAAGGGCATGTTTTTTAATCCAGACCCCTATCTGAAGATGAGTATCCAACCAGGCAAGAGGCACGGCTTCCCTACGTTCACCCACCACGGCCAGGAGAGACGAACCTCCATCATATCTAACACCACTAACCCTGTGTGGCACGGAGAGAAGTACACTTTTGTTGCACTGATGACAGACGTTTTGGAAATTGAGGTCAAGGACAAATTTGCAAAAAGTCGCCCGATCATCAAACGCTTTTTAGGTCAGCTGACAATGCCGGTGCAGAGACTGCTGGAGAGACATACAGCGGGTGATCAACATGTGAGCTTCACGCTTTGCCGTCGTCTACCGACAGAACATGTGAGCGGACAACTTTACTTCAGGGTGGAGATCACCTCCAACGGACATGAAGATGCAATGGGGTCTCTGCTGGGAGCCTCCTCTATGAACGGAGACCCTGGGAGCCCATCAGACGACGAGGATGTTTTACATCCTTCCTCCCGCATGGCTAGGGGCCCCTCACCCACTGGCTCCGAAGGGTCCCTGCACGGTGACGCTTTTAGGACTGAGGAGTGCATGATGGATCCTGATGAGGATCGACTCTTGAGAGACGGGCCACCAGATTTGGCCGAAGGAACCCCGGGCCATACTCATCGCCAGGCCTCACTTAACGACTACCTGGATGCCATTGAGGCCCCTAAGGGCCCCGGAGACAGACCGCTAGGGGCCGCCTCACCTAAACTACGCTCAAGTTTCCCCACTGACACACGGCTCAATGCTATGCTACATATAGACTCTGATGAAGACGAGGAAGGACACGTCTCCCGGGATTCGGCATTGACCAATGGCACTCCACGGCCTGATGGACACACCTCCTCTGAACAGGACAAACGGGAGGGTCCTGTGAAAGCGAGGGAAAGGCTTGAGTCGGAAGCTGCGAGCAGCACCACAGATACTGAAGTCACGCCATCAGGGTCAAGCAGTGGCTCCACAAAGAGCCAAAATGGAGGCGCTGAGGGCGGCCAAGAAGGAGCTGCTGCCTCTGGAGACTCAACACAAAACATCAGAAGCTCTCATAAGCCCGTTTTCAAAATACAGGATGAGGAAGGAGTTGCATCCAAGGCGGTCACTAGGGATGAAGGATCAACAGAGGCTGCTGCAGTCACAGAGCCCTCAGCATCTGGCAGTAATGCAGCTGGTGAAGGAGGCGGAGCCACAGCAGCTAAGCAGCCAGAGCAGGGGAACTCCAGTGAGGCAGCCAATGAGGAGGAAGAAGATGCTGAAATCTGGCAGAGGAGGCGGAGTCTGCAAGCATCAGGAAACGCATCACAGGCTGAAGCGATGGAATTAACCAATGAAGCGAGAGGGGCAGCTGACGCAGCACAGGCTGCCACGCTAACAGATGGAGAGACAGGAGCCTGTGCTCAAGTGAACGGCCATCAGCCAGTGCGTTCTCTTCCCTCAGTGCGTCATGACATCACCCGCTATCAGAGAGTGGACGAGCCTCTTCCGCCAAACTGGGAAGCTCGTATTGACAGCCACGGCAGGATTTTCTATGTGGATCATGTGAACAGAACCACCACCTGGCAGCGGCCTACTGCTCCGGCTGCACCTCAGATCCTACAGAGATCCAACTCCATTCAACAGATGGAGCAGCTTAACCGAAGGTATCAGAGTATTCGGAGGACAATAACCAATGAGAGGACAGACGAACAGGCTGCAGAGATGCCTACAGACGACACTGACCTGCTGCATCACTCCATACCTGAGTACCGTCGGGACGGTGTGGTTGGGCCCACTAGCTCTCGCTCCCGGTTGTCTCTGCTGCTTCAGTCCCCCAGCGCCAAGTTTCTCACCAGCCCAGATTTCTTCACCGTACTGCATTCCAACCCTAGTGCCTACCGCATGTTTACAAGTAACACATGTCTAAAACACATGATCAGTAAAGTGCGACGGGACGCGCACCACTTCGAGCGCTACCAGCACAATCGAGACCTGGTTGCCTTCCTCAACATGTTCGCCAACAAACAGCTGGATCTTCCGCGAGGCTGGGAAATGAAACACGACCACACGGGAAAGCCTTTCTTCGTGGACCATAACTGCAGGGCCACCACCTTCATAGACCCACGGCTGCCGCTTCAGAGCGCTCGACCCAGCAGCCTCCTCGCCCACCGCCAGCACCTCAGCCGTCAGCGCAGCCACAGCGCAGGGGAGGTGGGCGATGACCCTCGGCATGCCGGACCCGCTGTACTGCCACGCCCCTCGAACACCTTCACAGCCAATCGCAACCAGTGTCAGGATTTAGTTCCTGTTGCCTATAATGATAAAATAGTGGCATTTTTGCGGCAGCCGAACATATTTGAGATCCTTCAGGAGAGGCAGCCTGAGCTCATTAGGAATCACTCACTCAGGGAGAAGGTGCAGTTTATTCGTAATGAAGGAGCTTCGGGTTTAGCTCGCCTCTCCAGCGATGCAGACTTGGTGATTTTACTCAGGCTCACTTTTTTCACCAAACTCTCTCGTAACTCTGATCTCTTGCTCTCAGGTACACAACGAGCCAACGCTCGGGCCCCTGCGCCGTACAAGCGGGACTTTGAAGCCAAACTTCGGAATTTCTATCGCAAACTGGAGACGAAAGGCTACGGACAGGGTCCAGGCAAAGTCAAGTTGATAATCCGCAGAGATCATCTGCTGGAGGACGCCTTCAATCAGATCATGTGCTATTCTCGCAAAGATCTACAGAGAAGTAAACTCTACGTCAGCTTTGTTGGAGAAGAGGGACTGGACTACAGTGGCCCATCAAGAGAGTTTTTCTTTCTGGTGTCACGGGAGCTTTTTAACCCTTACTATGGCCTGTTTGAGTATTCGGCCAATGACACCTACACCGTCCAGATCAGCCCCATGTCTGCCTTCGTCGACAACCATCATGAGTGGTTTCGGTTTAGTGGCCGTATTCTAGGTCTCGCTCTTATCCATCAGTACCTGCTGGATGCCTTCTTCACACGACCCTTCTACAAAGGCCTACTGCGAATTCCATGTGATCTGAGTGATCTGGAGTATCTTGATGAGGAGTTTCATCAGAGTCTCCAGTGGATGAAGGACAATGACATAGAAGACATGCTGGACCTGACCTTCACCGTCAACGAGGAGGTGTTTGGACAGGTTGTAGATGCGCGGCTGGTGTCGGTGTTTGACGCGCGAGAGCTGGAGCTGGTGATCGCCGGAACGGCAGAGATTGATCTGGGAGATTGGAGGAACAACACCGAGTACAGAGGAGGTTACCATGACAACCACATCGTGATTCGCTGGTTCTGGGCGGCAGTGGAGCGATTCAACAATGAGCAGAGACTCAGATTGCTCCAGTTTGTGACCGGGACGTCCAGTATCCCGTACGAAGGCTTCGCCGCCCTCAGGGGCAGCAACGGACCGCGACGCTTCTGTGTAGAGAAATGGGGGAAAATCTCGTCTCTGCCCAGGGCTCACACATGTTTCAACCGTCTGGACCTCCCCCCGTATCCCTCCTTCTCCATGCTGTACGAGAAGATGCTGACGGCAGTGGAGGAGACCAGCACTTTCGGTTTGGAGTGAATGTTGACCTTTGCACTTTGAGCTGAACAAATACATTTCCTCAACACGTCTAGAAGAGCAAAGGAAGTAACAGACACCAGAAGCACTATATTTTGTACACCGTATCACTTAAAAATACTTCCTCAGAAACGCGCAGAACAGAAAACAATCAACCACACAACTGATAGAAGTGTGGATGTTCTCTAAATGTTTCCCAGATGCAAACGTGATTTTCTTTGTTCCGTCTGTATGGCGTCACAGCAAAAAGTAATCGGCTCTGGATGCATCGAGGAGGATGTGACCAGCCAAATGCAAAGCTGAGTTACTTAAATGAGGAGCAAAACAAACCCAAAGGACTTTGATATTCTCACTCTTTTTATCTGTAAAAAAAAAAAAAAAAAAAAAAAAGACTTTTTTACGGAGCATCAAAATACAGCGTGAATGAACAAATATAGTGTTGTGAGCTTTTTCAGACGTCTCAGATCGCCTCAAGCAAGACACATGACAGCGCTGCCCTGTATATTGAATTGAAATGTGTGTTCTCTCTTCTTTTTATCATATTTATACACGAGTCCATGTCACATGTTTGTTTTGAAAGCGTATTCTGTCCAGCTGTCGTGTCAGATTTGTGACACTTTTGAATGATTTTGGTTGTGCATGTGCTCTCACACGTGACGTTTTCAAAGGGCATGTTACACTGACGCACTACAACATCATGAATGTGACCACTAAATGATAGAAAAATGATGATTTTATGACCTTCTGACCTTTCCGTTGTCCTCAGATGACAGTTTTATTTCTGATGACATTTTGAAAGAGAGAATGGTCACATATACCCACTCAACAAGTCAACATGAAA

Function

symbol description
hecw2 Predicted to enable ubiquitin protein ligase activity. Involved in regulation of mitotic metaphase/anaphase transition. Located in mitotic spindle.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03268500_03312490.mRNA True 5510 mRNA 0.51 29 3268193 3313328

Neighbor

gene id symbol gene type direction distance location
CI01000299_03267154_03267336 NA coding upstream 802 3267154 ~ 3267391 (+)
CI01000299_03237334_03244737 GTF3C3 coding upstream 23378 3237334 ~ 3244815 (+)
CI01000299_03215678_03230586 NA coding upstream 37607 3215678 ~ 3230586 (+)
CI01000299_03189537_03200831 FAM134A coding upstream 66787 3189319 ~ 3201406 (+)
CI01000299_03176677_03185710 PRKAG3A coding upstream 82126 3176677 ~ 3186067 (+)
CI01000299_03366963_03373293 NA coding downstream 53490 3366818 ~ 3373682 (+)
CI01000299_03382616_03423028 NA coding downstream 69163 3382491 ~ 3423697 (+)
CI01000299_03453437_03453736 NA coding downstream 138972 3452300 ~ 3454209 (+)
CI01000299_03478949_03486009 NA coding downstream 162760 3476088 ~ 3486009 (+)
CI01000299_03495286_03498691 NA coding downstream 181211 3494539 ~ 3498729 (+)
G405611 NA non-coding upstream 58782 3208926 ~ 3209411 (+)
G405407 NA non-coding upstream 457521 2810452 ~ 2810672 (+)
G405390 NA non-coding upstream 537684 2730273 ~ 2730509 (+)
G405385 NA non-coding upstream 546869 2720862 ~ 2721324 (+)
G405329 NA non-coding upstream 553052 2659354 ~ 2715141 (+)
G405618 NA non-coding downstream 7196 3320524 ~ 3321012 (+)
G405619 NA non-coding downstream 7867 3321195 ~ 3321433 (+)
G405621 NA non-coding downstream 20899 3334227 ~ 3335205 (+)
G405660 NA non-coding downstream 93257 3406585 ~ 3406810 (+)
G405663 NA non-coding downstream 97206 3410534 ~ 3410764 (+)
G405609 NA other upstream 113019 3154597 ~ 3155174 (+)
G403972 NA other upstream 2661843 604870 ~ 606350 (+)
G403609 NA other upstream 2857405 364139 ~ 410788 (+)
G403578 NA other upstream 3195922 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 817930 4131060 ~ 4133941 (+)
G405842 NA other downstream 982205 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1176490 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1389054 4703071 ~ 4704780 (+)
G406096 NA other downstream 1611134 4924462 ~ 4927844 (+)

Expression


Co-expression Network