CI01000299_03382616_03423028


Basic Information

Item Value
gene id CI01000299_03382616_03423028
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3382491 ~ 3423697 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03382616_03423028.mRNA
ATATATAATGCAGTAGAGTCGAGAGTCTGTGCAGTGCCGAGGGGACTGAAAAAACACTGATAGGACAGATGTAGATCTATTATTCAAAGTCTCTGTTTGTATTATTCACATCTTAATTTCCCAGCATGTCTGGCTACATTGCACTTGGTCGCAAGAACTGGAAGGAAAAGAGGGGGGAAAATCGTGGAATAGGCTTTAGTTGTTATGGCTCATTTGATTTGAATTATTCATATTCTTCACCAGATGATGCTTCGGCTCTTGGTGAGCATGTGTTATTTCTTTCATCTGGTACCTGCTCTGTAGATGGAAGGAATGAGGTTTATGTGTGCCTCCCCAGCCCACCCCTGTGCGTCCACAGTGGCAGCGAGTGCTGTAATCTCATTATTCTGCTCTGGGAGGCTGGCTGTCGGCCCTGGAACTACGATTTACACATGGCATTTCAACAGGGAGGGGAGGGCCTGCTGTCGATGAAGCGCCCACTGACATTTATCCATTTGACACAACAAGTAATGGAAATATCGTTACTGTCGACTCTGAATGTCGAGGCTCCCATTGCTCAAGAGGAGAGAATAGAATGCTACAAAACGCCCTCTCAGCTCGCTCTCACAGTTAATGCTGCGCTGGTGCTTCTCATGCCAAGCGAGAGGAATAAACAGCAGAAAGCAGACAAGAGAAAATGCAGACAGGACCACAAAGGGCAGAGCCTCTCAAGCCAATTAAATGAGAGAGAATGGCACACAGACAGGAAATTTCCTCTGACCTCCCTGCCTTCCTCTGAAAGTGACAACCACTGTGACAACACTGTCCCTTTTGTCCATTTAAACCCTATTCTGACAGCTGTAGTGTATAGATACAGCTTGAGCATGGCTGGACTGGGACCTTATGATTGTCTTATGATTGCATCGGATCCTGATGGCTATGGGGTGGGGAAACTGGTGTCGGCAATAGGGGTGATTATTTCTGCCTGGACCAATGGGGAGCAGAGAATGATCTTACCACAGTCAGACAGCAATCTCCGCTTAAGTAAACAGCATGTGAAAGCTGCAGGATATGTAAAAACAGCCCGTCTAATCTGGGTTTGTGAGCGTCTACAGTGTTTTTTCCCCTTACTTATCCTGGATTTCCCAGAATGTTTAATGAGAGCGATTTGCTCATATGTCTCAAACTGCGCTCAGATTTGCTCAAACATCTCAAACTGCGCTCAGATTTGCTCAAATGTCTCAAGCTGTGCTCAGATTTGCTCAAACGTCTCAAACTGCGCTCAGATTTGCTCAAACATCTCAAACTGCACTCAGATTTGCTCAAACATTTCAAACTGCGCTCAGACTTGCTCAAATGTCTCAAGCTGTGCTCAGATTTGCTCAGACATCTCAAATTGTTCTCAGATTTGCTCAAACGTCTCAAACTGCGCTCAGATTTGTCTAAAAAGTCTCAAACTGTGCTCAGATTTGCTCAAACTGAGCTCAGATTTACTCTATGATGTCTGCGCCAGCATCACCCCGGGCACAATAGTCAGTAAAGCCATCAAAGAGTTTGTGGGGTTAAGCGCCCGGCTGGCATTATCCACACTAAGGATGCTAATGCCATTGAAATAGCCAGATCCATGGATGTAAATCTGGATTACTGGCTAAAAGGATCAAATCCCTGTCAGCCCTAATCGGGGATGATTTCTACTGATGAGTGTGGCAAAACTTAGAGCGCAGCGGAAGGAAATGCATTGAAATTGACACTTAACCTGTGGATGCCACTTAGCAGGCTTAGTGATGGAGATAACTTTCTGTGTGTGTGTGCGCGCGCGCGTGTGCGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTACACTAATGGAATAATACACTTACGTACTTCCCGTCATGATATGCTTGTGTACCAAAACACTGAAGATTCTGATTCAATTACCTTAAACTTACATAATGTTACCATGGTACAGATGGTCACACCAATTGTACTTTGCTATATACTGTATATACTGGCACTAGAATGGTATTTACATGGTACTTAAGTGTTACAAAAACCATGGTATTTGATGGTTATACTATGGTACTTTGAAATGTACCAAGCTTTTATGGTAAGTTATGGTATTTCCAAAAGTTCCTTGCTCAAAAACATACTCAAAAATGTTGTATTACCATGGTAAACGTCATTTAGTTGCCAAAGCAAGTTATAGTTTTTCATCTAATATTTATATTTTATCTTATTTCAGCTTTATTTCAATAAAAAAGAAACTAAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03382616_03423028.mRNA True 2264 mRNA 0.43 10 3382491 3423697

Neighbor

gene id symbol gene type direction distance location
CI01000299_03366963_03373293 NA coding upstream 8809 3366818 ~ 3373682 (+)
CI01000299_03268500_03312490 HECW2 coding upstream 69163 3268193 ~ 3313328 (+)
CI01000299_03267154_03267336 NA coding upstream 115100 3267154 ~ 3267391 (+)
CI01000299_03237334_03244737 GTF3C3 coding upstream 137676 3237334 ~ 3244815 (+)
CI01000299_03215678_03230586 NA coding upstream 151905 3215678 ~ 3230586 (+)
CI01000299_03453437_03453736 NA coding downstream 28603 3452300 ~ 3454209 (+)
CI01000299_03478949_03486009 NA coding downstream 52391 3476088 ~ 3486009 (+)
CI01000299_03495286_03498691 NA coding downstream 70842 3494539 ~ 3498729 (+)
CI01000299_03594891_03678552 ERBB4 coding downstream 171194 3594891 ~ 3679612 (+)
CI01000299_03981006_04059237 ERBB4 coding downstream 557309 3981006 ~ 4059237 (+)
G405621 NA non-coding upstream 47286 3334227 ~ 3335205 (+)
G405619 NA non-coding upstream 61058 3321195 ~ 3321433 (+)
G405618 NA non-coding upstream 61479 3320524 ~ 3321012 (+)
G405611 NA non-coding upstream 173080 3208926 ~ 3209411 (+)
G405407 NA non-coding upstream 571819 2810452 ~ 2810672 (+)
G405690 NA non-coding downstream 38681 3462378 ~ 3462582 (+)
G405693 NA non-coding downstream 43821 3467518 ~ 3467780 (+)
G405695 NA non-coding downstream 45300 3468997 ~ 3469199 (+)
G405697 NA non-coding downstream 48678 3472375 ~ 3472615 (+)
G405609 NA other upstream 227317 3154597 ~ 3155174 (+)
G403972 NA other upstream 2776141 604870 ~ 606350 (+)
G403609 NA other upstream 2971703 364139 ~ 410788 (+)
G403578 NA other upstream 3310220 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 707561 4131060 ~ 4133941 (+)
G405842 NA other downstream 871836 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1066121 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1278685 4703071 ~ 4704780 (+)
G406096 NA other downstream 1500765 4924462 ~ 4927844 (+)

Expression


Co-expression Network