CI01000299_03453437_03453736


Basic Information

Item Value
gene id CI01000299_03453437_03453736
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3452300 ~ 3454209 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03453437_03453736.mRNA
CCATAAAAAAATACGCCGCAACAGTTTGTCAACTTTGCACCCGCGGAGGCATTTGCGGCGCACCGACCGAGGCCATAATCTCCTAAAGATGTGAAGTGATTAGTTTGGAAATAACACTGCTGCTTCAGGGACCCTGGTTTTATGGGCCGAAGCTCGAACAGACGTATGGAAATACAACTTCTGAGACGATTTTCTTGAGGTGGTCTCTCAGCTCCCATTTTCAATCTGATAAATGTCTGTTCCTGCCAAGCATATTCCACTCGCTAGTCACTTGTGTGTTGTTGCGCTGCTAGCGTTAACATCCTCGTCCAAGCATAACTTTCCAGGCAATGCGGCTTCTCTGAAAAGCTTCTATTCACCAACGCCGAAGGTTCTTTTCAGCCCTTGTTTCAATAGATCGGTTACCCAAGCAAGCCGCCACCTCCATTCAGGTTTGACTTATTCACGGATTATCTGCCCTGCTCTCTGTTTCTTTTCACTCCATCACCTATCTTGAGACTTAATGGAAAATCTGTCCATTCCGGCGCCCTCTATTAGCATGAAACATGCCTATTCAGCTTTTGCTTTTGACCGGAATGGGCCGCGATGCTAATAGGTCTGCGGGAGATGCTGGGGAACCTTGTGGCAGCCGCAAGGGGGATCCCGAGGGTGTGGCCTCTATCGCCTCGTCGTATCTTAATGCACGTCTTCCAGAACAAATTGGCCTGTTTACTTAAGAATTGGCAGTGACCCATGAATATTTGATAGTGAGCAACTGTTGACGGCCGCGTACAATGACTCCCTTATCTTATTTAGCCAGCCTGGCAGGCTCACGCCTCCCAACACTTCCCCTGAGAGACGGACGCCGCTGAAAGGGTTTGCAATCCAATACGGCAGCTGCACACCAAAGCCAGCGGTTATCATTGAGAGTGCAGGGCCGTCTAAGCCTTTCCCCCTTTCCCCAACAGTCGGGTATACAGGATATTAGTTGAACCTCTCATATCACCTTTGCCGCAATGGCTAATAATACAGCAGCCTGGAAATCAATGAAGCTGCCCTAGATTTCAGCTCGGCGCTCTCCATAAAGGGATCTAGAGGGCAGTGAGATTTTCGTTTTCTCCTCTTTTTTCTCTTTTCTCTTATTATAGGGGAAGAAAAATGGGTGACCGGGACTGGGAGATCATTTCTCCTGCTCAGAAAGTGCTAGCCACTCTCTCCAGGGAGGTGAGTGTTTCAGTGGGGTTTATACTACGCTATGACAGTGGCTGTCTCTCTTCATTAGAGCACAGGCCTTTGCTCCCTCAAATGGTAATTCAGCAGCGCAGGATTGTGCTGAATGCGCAGAGGAGAATTCTGGGTGGGTTGATAGAGACGAGAACAGAGCGAGAGAGATGTGATGAGATCAGGTTTCGCTCTCCGGGCCAGTGGTGGGCGACCTTATCTGCGAAGGACCCCTGAGGGTCTGTGTTTTCATTCTAAATGCACCTGCCTCAACAAATACAAAGCTTAGTTTAATGACAGCAGTTAGCATATTGAGATAAATGTGAGTTAAAAAAAGCCACTATGAATGGAAATTAATTAAGGTGCACACAGAAGTGGTTTATAGGTAGACTGAATACAACTATGCAAAGACTGAAACTGAGAAAAAATGTTTTTATTGCATTTTGATTGATTTTATATTAACTTTTTTCTCTGAATCAGAGCACAGTTGAGTCAAATTTATTTTGTCAGAGAACTGATCATAGTCTAAAGGGCCGTTCAGAACAAAGACAATAACTATTGTGATAACTGTAAGGTTTTAATCAACCTTCTAAGTCCACAAAATGGCACAGAGGAACAAAATCGCCGGAATCATTTTCAGAGCGATTCACATTTCATGAACGATTTCAGAACGAGCCAATCAGAACTTTTTCCTCACTTTAAAGAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03453437_03453736.mRNA True 1910 mRNA 0.45 1 3452300 3454209

Neighbor

gene id symbol gene type direction distance location
CI01000299_03382616_03423028 NA coding upstream 28603 3382491 ~ 3423697 (+)
CI01000299_03366963_03373293 NA coding upstream 78618 3366818 ~ 3373682 (+)
CI01000299_03268500_03312490 HECW2 coding upstream 138972 3268193 ~ 3313328 (+)
CI01000299_03267154_03267336 NA coding upstream 184909 3267154 ~ 3267391 (+)
CI01000299_03237334_03244737 GTF3C3 coding upstream 207485 3237334 ~ 3244815 (+)
CI01000299_03478949_03486009 NA coding downstream 21879 3476088 ~ 3486009 (+)
CI01000299_03495286_03498691 NA coding downstream 40330 3494539 ~ 3498729 (+)
CI01000299_03594891_03678552 ERBB4 coding downstream 140682 3594891 ~ 3679612 (+)
CI01000299_03981006_04059237 ERBB4 coding downstream 526797 3981006 ~ 4059237 (+)
CI01000299_04105476_04115171 LANCL1 coding downstream 651267 4105476 ~ 4115227 (+)
G405663 NA non-coding upstream 41536 3410534 ~ 3410764 (+)
G405660 NA non-coding upstream 45490 3406585 ~ 3406810 (+)
G405621 NA non-coding upstream 117095 3334227 ~ 3335205 (+)
G405619 NA non-coding upstream 130867 3321195 ~ 3321433 (+)
G405618 NA non-coding upstream 131288 3320524 ~ 3321012 (+)
G405690 NA non-coding downstream 8169 3462378 ~ 3462582 (+)
G405693 NA non-coding downstream 13309 3467518 ~ 3467780 (+)
G405695 NA non-coding downstream 14788 3468997 ~ 3469199 (+)
G405697 NA non-coding downstream 18166 3472375 ~ 3472615 (+)
G405609 NA other upstream 297126 3154597 ~ 3155174 (+)
G403972 NA other upstream 2845950 604870 ~ 606350 (+)
G403609 NA other upstream 3041512 364139 ~ 410788 (+)
G403578 NA other upstream 3380029 35462 ~ 72271 (+)
CI01000299_04131136_04133439 PCNP other downstream 677049 4131060 ~ 4133941 (+)
G405842 NA other downstream 841324 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1035609 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1248173 4703071 ~ 4704780 (+)
G406096 NA other downstream 1470253 4924462 ~ 4927844 (+)

Expression


Co-expression Network