CI01000299_03492360_03492614


Basic Information

Item Value
gene id CI01000299_03492360_03492614
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3492214 ~ 3493144 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03492360_03492614.mRNA
ACACTCTCACTTTCACACAAACACAGTACTAGCATACAGGTATTCTCGTGTACATGCACACATCGGTAAAGCTGAACGTGTATACACTGACAAAAATGCATACGAGAGCAAGGCTGAATCTCACCAACACATCCAGAACACATCCGGGTCATATTTCACCACAAAATCAAAAGCAATAAGAAGTAATATTTTGCATTTTTATATTATTTGATGACAATTATGCATGATTTTCGCCATTAAATTGCCCCAATGGAAAAAAAATGAAGGAAAACATACATAATTCTTCGTAAAAAATGTCACAAAAAAAAAAAAAAAAAAAAAAACTTAATTTTATGCAAAATAGAATTTCTTGTTTTTCCCCTTTGATTTTAAGTGTAAAATGTGAGCTGGACATTCGTGAGATTCACCCACAAACATCTCACAGATTTGAACTGAGGCACCCGCAGATATTCTGATATTTTTACACATGATACGGAGTGGTCTGATAACTGCCGTGATTTTACACGAGGGGAGGTGCCGAGTTACAAGAAATGGCTTTACAGAATCCGCTCGGAAATCCACCGGCGTATTCTCCGGGACATCAGTGCTATATGTTTTTGCGCATTTCCTCATTGGTGGACTCCTCCCCCAGAGAGAATGAACCAATGGAACTTTGGGAGTTCTATGACATCACTTATGAACAAATTAATCTCAGTGTTTGTAGGTTGTCAAGTTTTGAGAAGCAGGCTGCAGAAGTTTGGCTTACGTATGTCCAGTTATATGTGGCAAAAACACAGAGGCACTAGCATAGGAGGTGACATCAGAGAGGTTACACGTCCTCGTTTTCATGATCACCATCTTTGTACTTCTTTTTTCTTTTCTTTTTTTTTGGGGGGGGGGGGGGGGAAACTTGATTGAGAAGAACCAGCGAGAGTGTCCACTTCAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03492360_03492614.mRNA True 931 mRNA 0.39 1 3492214 3493144

Neighbor

gene id symbol gene type direction distance location
CI01000299_03341031_03366645 KLF7, KLF7A, KLF7B coding downstream 125486 3340766 ~ 3366728 (-)
CI01000299_03206204_03214303 MDH1B coding downstream 277911 3206185 ~ 3214303 (-)
CI01000299_03104921_03106385 NA coding downstream 385829 3104605 ~ 3106385 (-)
CI01000299_02951402_03057288 PARD3BA coding downstream 434926 2951402 ~ 3057288 (-)
CI01000299_02891830_02905146 NRP2B, NRP2A, NRP2 coding downstream 587068 2891574 ~ 2905146 (-)
CI01000299_04136702_04142005 NA coding upstream 641676 4134820 ~ 4142125 (-)
CI01000299_04158468_04164223 MX2, MX1, MXB, MX, MXA coding upstream 664857 4158001 ~ 4164715 (-)
CI01000299_04171373_04175441 NA coding upstream 678005 4171149 ~ 4175441 (-)
CI01000299_04186183_04196219 MX1, MXB, MXA coding upstream 691823 4184967 ~ 4197884 (-)
CI01000299_04227918_04239792 EFNB2B coding upstream 734376 4227520 ~ 4239792 (-)
G406993 NA non-coding downstream 10672 3481099 ~ 3481542 (-)
G407023 NA non-coding downstream 14230 3477600 ~ 3477984 (-)
G407020 NA non-coding downstream 16418 3475530 ~ 3475796 (-)
G407015 NA non-coding downstream 19591 3472121 ~ 3472623 (-)
G407012 NA non-coding downstream 22836 3469091 ~ 3469378 (-)
G407030 NA non-coding upstream 11762 3504906 ~ 3560018 (-)
G407112 NA non-coding upstream 139277 3632421 ~ 3634581 (-)
G407117 NA non-coding upstream 144646 3637790 ~ 3643952 (-)
G407119 NA non-coding upstream 151450 3644594 ~ 3655355 (-)
G407232 NA non-coding upstream 420877 3914021 ~ 3920821 (-)
G405053 NA other downstream 1474164 2017687 ~ 2018050 (-)
G404976 NA other downstream 1611226 1855639 ~ 1880988 (-)
G404784 NA other downstream 1832214 1659655 ~ 1660000 (-)
G404372 NA other downstream 2416323 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 2819358 670680 ~ 673625 (-)
G407413 NA other upstream 982850 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 1432824 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 1948193 5427661 ~ 5443433 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location