CI01000299_03495286_03498691


Basic Information

Item Value
gene id CI01000299_03495286_03498691
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 3494539 ~ 3498729 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_03495286_03498691.mRNA
GTATAAAGGCATAGTGAGAGAACACGTCACGTGTGTCACAAAAACACAAATCTTCAAAAGCTAAAATGGCAAAAAGATAAACCCTAATCCTTACAAACAAAGTACTGTACTGTTAATAAACGATCGTGCTAATATCACGTACTGAATGATACTATCCATGATAATAAACTTGGTGTAGTACCAGGTTGTTGTCGTTGTACATGACCAAGAAACATTGTATTACCACGGTACCAAGTCTTAAAAAGCACTGAGACATGCAAAACAGAATAAATTAATTTAAAATATTCGAACTTATTGTACATTATTGCAATTAAGAGTCTCGAGGATGTCAAAGTGAAGCATGACTGCGAATACTGTAGTAAGAACTAAAATCCACACACAATAACAGATTTGTGTTTGGGGGGCGTGCTTCACTTTAATTAATTCACACTTCTGTCCAATCACTGCTCAGGAGGGCGGTGTTCAAGCGCTCAAGGCGCGCGCCCGAGCACGGAGACCGTAACTCGGTCCGGAATTCAGCGTAGAGTGATGACAGTCCCAACGCAGTCACATTTAGACAAGGAATAACTCACGTTCACCTCTTATCATTTAATGAACTGATCCAGTTTTACTTCCAGAGAAAAAAAAAACAAAAAACAAGGCGCAACTCCAGACCATGCGCTCATTGTGAACAGCTGCGCAAAGACGCACAGGCTGAAAGACATTTGACAGCTCGCCAACGGGACATTGGAGTGGACATGTGAAGAAATGGATATGCAGCCTCTTCTTTTGATCAAAATGCGATCTGACATCATCATCATCGTCCTCATCCTCACTGCTGTGATTGTTCCCCTGTGCACCTCGCAGTCAGGCCTGGCTATGTGGAAAATCGTTTTAAAAACGTGTCCTTTAAATGCTTCTCATTTATGCATCAGCTCACACCTCTGTCGAGAACCATATGGCACCGTGTTTGACCCAGGCTTCCATCTGACATTTAAGTCTGATAGAAAATTACTGCTGTATTTGACCGTGGTGGCGTTTTGGCTCTTGACCCATGTGTGCAAAGCAGTGAGAAACTTCTTTCTCTATTCAATTGAGCTCTCAGACTCTCCGCCAAAGCAAATGGTTGACTTCTTTTTTCAGCATCCTCTTATTGTCCCGGCTCTTAAGAGGGAATGACATCTTCAATTTACCGATTCTCGGTACGAAGTAAACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_03495286_03498691.mRNA True 1196 mRNA 0.42 3 3494539 3498729

Neighbor

gene id symbol gene type direction distance location
CI01000299_03478949_03486009 NA coding upstream 8530 3476088 ~ 3486009 (+)
CI01000299_03453437_03453736 NA coding upstream 40330 3452300 ~ 3454209 (+)
CI01000299_03382616_03423028 NA coding upstream 70842 3382491 ~ 3423697 (+)
CI01000299_03366963_03373293 NA coding upstream 120857 3366818 ~ 3373682 (+)
CI01000299_03268500_03312490 HECW2 coding upstream 181211 3268193 ~ 3313328 (+)
CI01000299_03594891_03678552 ERBB4 coding downstream 96162 3594891 ~ 3679612 (+)
CI01000299_03981006_04059237 ERBB4 coding downstream 482277 3981006 ~ 4059237 (+)
CI01000299_04105476_04115171 LANCL1 coding downstream 606747 4105476 ~ 4115227 (+)
CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding downstream 623872 4122601 ~ 4126381 (+)
CI01000299_04131136_04133439 PCNP coding downstream 632331 4131060 ~ 4133941 (+)
G405697 NA non-coding upstream 21924 3472375 ~ 3472615 (+)
G405695 NA non-coding upstream 25340 3468997 ~ 3469199 (+)
G405693 NA non-coding upstream 26759 3467518 ~ 3467780 (+)
G405690 NA non-coding upstream 31957 3462378 ~ 3462582 (+)
G405575 NA non-coding downstream 6566 3505295 ~ 3535698 (+)
G405579 NA non-coding downstream 53585 3552314 ~ 3557103 (+)
G405710 NA non-coding downstream 199699 3698428 ~ 3725180 (+)
G405742 NA non-coding downstream 279304 3778033 ~ 3783926 (+)
G405578 NA non-coding downstream 394291 3893020 ~ 3912958 (+)
G405609 NA other upstream 339365 3154597 ~ 3155174 (+)
G403972 NA other upstream 2888189 604870 ~ 606350 (+)
G403609 NA other upstream 3083751 364139 ~ 410788 (+)
G403578 NA other upstream 3422268 35462 ~ 72271 (+)
G405842 NA other downstream 796804 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 991089 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1203653 4703071 ~ 4704780 (+)
G406096 NA other downstream 1425733 4924462 ~ 4927844 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000076 NA non-coding NC_007112.7 CM002885.2 6665033 ~ 6668339 (+)