Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000299_04105476_04115171 |
| gene name | LANCL1 |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000299 |
| NCBI id | null |
| chromosome length | 6567443 |
| location | 4105476 ~ 4115227 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| lancl1 | Predicted to enable glutathione binding activity; glutathione transferase activity; and zinc ion binding activity. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in cytoplasm and membrane. Predicted to be active in plasma membrane. Orthologous to human LANCL1 (LanC like 1). |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000299_04105476_04115171.mRNA | True | 1282 | mRNA | 0.50 | 9 | 4105476 | 4115227 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000299_03981006_04059237 | ERBB4 | coding | upstream | 46239 | 3981006 ~ 4059237 (+) |
| CI01000299_03594891_03678552 | ERBB4 | coding | upstream | 425864 | 3594891 ~ 3679612 (+) |
| CI01000299_03495286_03498691 | NA | coding | upstream | 606747 | 3494539 ~ 3498729 (+) |
| CI01000299_03478949_03486009 | NA | coding | upstream | 619467 | 3476088 ~ 3486009 (+) |
| CI01000299_03453437_03453736 | NA | coding | upstream | 651267 | 3452300 ~ 3454209 (+) |
| CI01000299_04122601_04126314 | MLE3, MYLZ3, MYL1 | coding | downstream | 7374 | 4122601 ~ 4126381 (+) |
| CI01000299_04131136_04133439 | PCNP | coding | downstream | 15833 | 4131060 ~ 4133941 (+) |
| CI01000299_04259743_04263032 | ENG1B, EN1 | coding | downstream | 143694 | 4258921 ~ 4263493 (+) |
| CI01000299_04269257_04269673 | NA | coding | downstream | 153240 | 4268467 ~ 4269765 (+) |
| CI01000299_04472181_04474247 | NA | coding | downstream | 355729 | 4470956 ~ 4474271 (+) |
| G405797 | NA | non-coding | upstream | 28439 | 4076805 ~ 4077037 (+) |
| G405569 | NA | non-coding | upstream | 39911 | 4065131 ~ 4065565 (+) |
| G405578 | NA | non-coding | upstream | 192518 | 3893020 ~ 3912958 (+) |
| G405742 | NA | non-coding | upstream | 321550 | 3778033 ~ 3783926 (+) |
| G405710 | NA | non-coding | upstream | 380296 | 3698428 ~ 3725180 (+) |
| G405573 | NA | non-coding | downstream | 13767 | 4128994 ~ 4129600 (+) |
| G405577 | NA | non-coding | downstream | 64623 | 4179850 ~ 4196335 (+) |
| G405815 | NA | non-coding | downstream | 104214 | 4219441 ~ 4219649 (+) |
| G405817 | NA | non-coding | downstream | 107934 | 4223161 ~ 4223448 (+) |
| G405818 | NA | non-coding | downstream | 109588 | 4224815 ~ 4225273 (+) |
| G405609 | NA | other | upstream | 950302 | 3154597 ~ 3155174 (+) |
| G403972 | NA | other | upstream | 3499126 | 604870 ~ 606350 (+) |
| G403609 | NA | other | upstream | 3694688 | 364139 ~ 410788 (+) |
| G403578 | NA | other | upstream | 4033205 | 35462 ~ 72271 (+) |
| G405842 | NA | other | downstream | 180306 | 4295533 ~ 4320141 (+) |
| CI01000299_04480751_04492829 | NA | other | downstream | 374591 | 4480553 ~ 4493116 (+) |
| CI01000299_04703290_04704365 | NA | other | downstream | 587155 | 4703071 ~ 4704780 (+) |
| G406096 | NA | other | downstream | 809235 | 4924462 ~ 4927844 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|
