CI01000299_04136702_04142005



Basic Information


Item Value
gene id CI01000299_04136702_04142005
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4134820 ~ 4142125 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000299_04136702_04142005.mRNA
AGTAAAGAAACAGCATCACTTTGAGACAATCTTATCGAAGAGTGCACAAACTGACAGCGTCTATCATATTGACGTGAAATATTTTTCTTTGTTATTTTGACATTTTGATCTTATTTAAGGATGGAGAAAATGAGTTACACGTTCAGTCAGCACTATGAGGAAAAAATCCGCCCTTGCATCGACACTATCGACAATTTACGGTCTTTGGGAGTCGAAAAGGACCTGGCGTTGCCTGCCATCGCCGTCATTGGAGACCAAAGCTCAGGAAAGAGTTCTATTCTGGAGGCGCTGTCAGGAGTAGCGTTACCCAGGGGTAGTGGAATCGTTACACGATGCCCTCTTGAGCTCAAGATGATAAGAACTAAAAGCAAAGAATGGCATGGGAGAATCAGTTACAAGAACCATAAGGAAGACATTAAACACCCAGCAGAAGTGGAGAAAATGATTCTTAAAGCCCAGGATGAGATGGCTGGAGCAGGTGTTGGTATTAGTGATGAACTCATCAGTCTGCAGATCACCTCTGCCAATGTTCCTGACCTCACTCTCATCGACCTTCCCGGGATCGCTCGAGTGGCAGTCAAGGGTCAACCTGAGAATATTGGAGATCAGATTAAGAGTCTGATCAAGAAGTTTGTTACAAAGCAAGAAACCATTAACCTGGTTGTGGTGCCATGCAATGTTGACATCGCGACCACAGAAGCATTGCAGATGGCTCAGGCAGAGGACCCTGAGGGCGAAAGGACTTTAGGCATCTTAACAAAGCCAGACCTGGTGGATAAAGGCACTGAAGGGACAGTGGTAGACATTGTGCACAACGAGTTCTTTCCCCTTGCTAAAGGCTACATGATTGTAAAGTGCAGGGGACAAGAAGAGATTACAAATAAGGTTAATCTCAGTTTGGCCACAGCAAAAGAGAATGTCTTCTTCAAAGACCATCCTCAATTCAGCAAACTCTATGAAGAAGGTTTTGCTACTATTCCTAAGTTGGCTGAGAGACTAACAATTGAGTTGGTTCATCACATTCAGAAATCCTTGCCTAATTTAAAAAAGCAAATTGAGGCAAAGCTCAATGAAACACAGATGGAACTGGACAAATATGGCAACAGACTACCTTCAGACCCTGCAGACAGACTGAACTTTCTTAGTGGTAAAGTTATAGCTTTCACAACTGATACTGTCAAGCTGAGCAAAGGGGAATCAGTTACATGTGGATCAGATCTACTGATTTTTCCAAAACTTCGTGAAGAATTTGCAAAATGGAATGGCTTCTTGGATGACTCAGGAAAATCATACATAAATATGATAACCAACTTTGAAGCCTATCGAGGAAGGGAGCTTCCAGGATTCATCAATTACAGTACCTTTGAAGAACTTGTTGGCGAACAGATCAAGCTGTTGGAAAAACCTGCCATAGAGACACTGAAGGCCATCTCCGATGTGGTTAGAGAGAAGTTCATCCAACTGGCCCAGTACAGCTTCAAAGGATTTCCTAATCTTCTGCAAATAGTAAAGACCAAGATCGAAAACATCAAGCAGGAGAAAGAATCCCAGGCAGAATCCATGCTGAGGACCCAATTCAAGATGGAGCTCACTGTTTACAGTCAAGACGGCACATACAGCCAGAGCCTGCAACATGCAAAGAATATGGTGAAAAAGGATGAAAAAACTAAAGAAAGTGTTAACTGGATGAGTGCAGGCATTAACACAGACACTGATGTCTCCTTGCGTGAGATGAGGTTGCACCTTGAGTCCTACTACTCGATTGCAAGCAAGCGTCTAGCTGACCAGATCCCAATGGTGATTCGCTATCTGCTGCTCCAGGAAGCAGCTTTGGAGCTGCAAAGGAACATGTTGCAGTTGCTGCAAGATAAAGATGGTGTTGACTTCCTGCTTAAAGAAGACTTTGACATTGGCCAAAAGCGGGAGAGCTTACTGAATCGCCAGAAACGCCTGAATGAAGCACGCAGCCTCTTGAATAACTATTAGAATTCACTTCATATAGTTGATTGCAACAGTTTTAATGCAACAAAATCATATGCTCAAGAGGTTATAGCTTGAAATATTCAGCATGGGGAACAACCCTGTAAACTTATGCTGAGCTCTTTGTAGCAACCTGTGTGGCTTCAAGAGAGCAACCACACATTTTTTTTTTCTTTTAAATTCATTCATTTATAATCATTTATGATTTTATTATTCTATTTAATCATTTAAAACATATATTTGCTCATTACATTGATTCATTCATTAATCAGTTTATATTATATTTTATACTATTTTCCATACTGTTTAGTCTTATGTTGTGTGCTGTGCTGTCTTTGCGGGTTAGAGATGAGAGTCTTTTAACATCACAGGATGATGTTGTGAAGCAGTGATTTTCCATTGCTATTGCTTTTGGTATAATAACACTTGTTGGATTTGTGCTGGTCAGATGCAGTTTTACTGAGCATTGAAACAGACACAACTATGATTATTAAATAAACTTTTCTCATTTTACCATCACTTCATCGCCTGCTTTCTGCTCTTCCCGACTTCCTCCATCTGCCTCTTGGGCTGATAGAAGACTGTTAATACAGTACAGAGTACTTGACAAAATTGAATGCATTTATGTCTGTTACTTAATTTAATGTTTATCAGATTGTTGTCCTTAGTCTGAAATGGACATAAATCATAAAAGTGTTTTTTTTTTTTCAGTGGGGTTCAGTGTTGTTTGTACCCCAACATTTGCATCAAAATATCTTCTCTTGTTTTCCACAGAATACATAGGTTTGAAATTAAATGGGAATGAGTAAATGACAGAATCTTCATTTAATTGATTTCAATGACCTAATGTTAAAGGATTAGTTCACTTCAGAATTAAAATTTCCTGATAATTTACTCACCCCCATTCTTCAGTCGAAAAGAAATCAAAGTTTTTCAGGAAAACATTCCAGGATTTTTCTCCATATAGTGGACTTCACTGGGGTTCAACGGGTTGAAGGTCCAAATGTCAGTTTCAGTGCAGCTTCAAAGAGCTCTACATGATCCCAGACGAGGAATAAGAGTCTTATCTAATGAAACGATCTGTCATTTTCTAAAAAAAAAAAAAAATTTATGTACATTTTAACCACAAATGCTCATCTTGCACTGCTCTGCAATGCGCTACGCATTACGTAACCACGTTAGAAAGGTCACATGTGACGTAGGCGGAAGTACCATGTTAGGGCAAAAAACTCAACAAAAAAAACCACATCTCATTTTCTCCTCCAACTTCAAAATCATCCTACATCATTGTTTTACCTTTTTTTGTAAAGGTAGTTTGGCTTAATCTTTGCACATTCACTTGTAGACACCTTTCCAATGTGATTTCGTAATGTGTGGCTCATCACAGAGCAATGCAAGACGAGCATTTGTGGTTAAAAAGTATATACATTTTTATTTTATTTTTTTTTTTAGAAAATGACCGATCGTTTCACTAGATAAGACCCTTATTCCTCATCTGGGATCGTGTAGAGCTCTTTGAAGCTGCACTGAAGCAGCAATTTGGACCTTTCACCCGGTGTACCCCAGTGAAGTCAACTATATGGAGAAAAATCCTGGAATGTTTTCCTCAAAAACCTTAATTTCTTTTCGACTGAAGAAAGAAAAAACAAACATCTTGGATGACATGGAGGTGAGTAAATTATCAGGAAATTTTCATTCAGAAGTGAACTAATCCTTTAATAACCTTACTATGATCATTTAAATGTGTGTTCCAGGAATTAGTTTTATAGTTATAACATATTTTTTCCTTTATTAGTATCAATCAATAATGTACACTCAAGTTCACTCAACTACATACTCAAGACGTCATATGCATCCTCACACTATCAGTGAATGGGCACGGAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000299_04136702_04142005.mRNA False 3868 mRNA 0.39 12 4134820 4142125

Neighbor


gene id symbol gene type direction distance location
CI01000299_03492360_03492614 NA coding downstream 641676 3492214 ~ 3493144 (-)
CI01000299_03341031_03366645 KLF7, KLF7A, KLF7B coding downstream 768092 3340766 ~ 3366728 (-)
CI01000299_03206204_03214303 MDH1B coding downstream 920517 3206185 ~ 3214303 (-)
CI01000299_03104921_03106385 NA coding downstream 1028435 3104605 ~ 3106385 (-)
CI01000299_02951402_03057288 PARD3BA coding downstream 1077532 2951402 ~ 3057288 (-)
CI01000299_04158468_04164223 MX2, MX1, MXB, MX, MXA coding upstream 15876 4158001 ~ 4164715 (-)
CI01000299_04171373_04175441 NA coding upstream 29024 4171149 ~ 4175441 (-)
CI01000299_04186183_04196219 MX1, MXB, MXA coding upstream 42842 4184967 ~ 4197884 (-)
CI01000299_04227918_04239792 EFNB2B coding upstream 85395 4227520 ~ 4239792 (-)
CI01000299_04242809_04251680 ARGLU1 coding upstream 100072 4242197 ~ 4251865 (-)
G407318 NA non-coding downstream 5600 4129003 ~ 4129220 (-)
G407288 NA non-coding downstream 7180 4121679 ~ 4127640 (-)
G407306 NA non-coding downstream 68172 4066205 ~ 4066648 (-)
G407303 NA non-coding downstream 84993 4049542 ~ 4049827 (-)
G407280 NA non-coding downstream 97036 4034732 ~ 4037784 (-)
G407296 NA non-coding upstream 14700 4156825 ~ 4179627 (-)
G407330 NA non-coding upstream 65672 4207797 ~ 4208154 (-)
G407340 NA non-coding upstream 117357 4259482 ~ 4263461 (-)
G407343 NA non-coding upstream 124229 4266354 ~ 4266553 (-)
G407344 NA non-coding upstream 125094 4267219 ~ 4267442 (-)
G405053 NA other downstream 2116770 2017687 ~ 2018050 (-)
G404976 NA other downstream 2253832 1855639 ~ 1880988 (-)
G404784 NA other downstream 2474820 1659655 ~ 1660000 (-)
G404372 NA other downstream 3058929 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 3461964 670680 ~ 673625 (-)
G407413 NA other upstream 333869 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 783843 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 1299212 5427661 ~ 5443433 (-)
G407805 NA other upstream 1685711 5835889 ~ 5835989 (-)

Expression



Co-expression Network