CI01000299_04158468_04164223 (MX2, MX1, MXB, MX, MXA)


Basic Information

Item Value
gene id CI01000299_04158468_04164223
gene name MX2, MX1, MXB, MX, MXA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4158001 ~ 4164715 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU467961
ACCGACAGCAGCATCACTGAGACTGAGTGCACGTTAGACAGCCTGACGGATCGACGTGAAGTATTTATTTTTGCTTTTTGACATTTTGACGTTGTTTAAGGATGGAGAAAATGAGTTACACGTTCAGTCAGCACTATGAGGAAAAAATCCGCCCTTGCATCGACACTATCGACAATTTACGGTCTTTGGGAGTCGAAAAGGACCTGGCGTTGCCTGCCATCGCCGTCATTGGAGACCAAAGCTCAGGAAAGAGCTCTGTTCTGGAGGCGCTGTCAGGAGTAGCGTTACCCAGGGGTAGTGGAATTGTTACACGATGCCCTCTTGAGCTCAAGATGATAAGAACTAAAGGCGAAGGGAAATGGCATGCGAAAATCAGTTACCAGGACTATGAGGAAGACATTGATGACCCAGCAGAAGTGGAGAAAAAGATTCGTGAAGCCCAGGATGAGATGGCTGGAGCAGGTGTTGGTATTAGTGATGAACTCATCAGTCTGCAGATCACCTCTGCCAATGTTCCTGACCTCACTCTCATCGACCTTCCCGGGATCGCTCGAGTGGCAGTCAAGGGTCAACCTGAGAATATTGGAGATCAGGTAAATTTAACT
>CI01000299_04158468_04164223.mRNA
AATCACAATAAAATAAAATATTTCTTGAATGAACTTTATTAATTTATCAGGCCTATTATTATTATTTCAATATCAACTATTTTGCAAATAATACATGGGTATAATTTTAAAAAGTGAGTGATTATATGGGAAGATTAGGAGCGTGAGAACGTAAATCAGTGAAGTAAATAACTTCTTAATTACTCGCGTTAGTAGCGCTGTGTTGCTTCCATTGTTTATACTAAATCGAGTTATCCAGGTTTCTGTTATATGTATAGAAACATTATATGCTGGTACGCAAACAAATGCGTCTAAACCTTTCTTCAAGGGGTGAAACGAAACTATGACACCCAACCCAGGAAATGAAACTTACTAAGGCACATAAACGCTCTAGGAACTTAGGATTCATTTTACCGACAGCAGCATCACTGAGACTGAGTGCACGTTAGACAGCCTGACGGATCGACGTGAAGTATTTATTTTTGCTTTTTGACATTTTGACGTTGTTTAAGGATGGAGAAAATGAGTTACACGTTCAGTCAGCACTATGAGGAAAAAATCCGCCCTTGCATCGACACTATCGACAATTTACGGTCTTTGGGAGTCGAAAAGGACCTGGCGTTGCCTGCCATCGCCGTCATTGGAGACCAAAGCTCAGGAAAGAGCTCTGTTCTGGAGGCGCTGTCAGGAGTAGCGTTACCCAGGGGTAGTGGAATTGTTACACGATGCCCTCTTGAGCTCAAGATGATAAGAACTAAAGGCGAAGGGAAATGGCATGCGAAAATCAGTTACCAGGACTATGAGGAAGACATTGATGACCCAGCAGAAGTGGAGAAAAAGATTCGTGAAGCCCAGGATGAGATGGCTGGAGCAGGTGTTGGTATTAGTGATGAACTCATCAGTCTGCAGATCACCTCTGCCAATGTTCCTGACCTCACTCTCATCGACCTTCCCGGGATCGCTCGAGTGGCAGTCAAGGGTCAACCTGAGAATATTGGAGATCAGAAATCCCTGCCTCGTTTAGAAGGGCAAATTGAGACAAAACTCGCAGAAACACAGAAGGAGCTGGAGGCGTATGGCAACGGACCCCCATCAGACCCTGTAGAAAGACTGAGCTTTCTCATCGATAAAGTTACAGCTTTCACTCATGATATGTTCAACCTGACCACTGGGGAGGAAGTAAAGTGTTCTTCAGATCTACTGGTTTTTCCAGAACTTCGGGAAGAATTTTTAAAATGGAATGGCTTCTTGGAGCGTTCAGGACATTCCTTTAACAAGAAGATTGAAAAAGAAGTTGATAACTATGAAGCCAAGTATCGGGGAAGAGAGCTTCCAGGATTCATCAATTACAAGACCTTTGAAGGGCTTGTCAGGGAACAGATCAAGCTGTTGGAGGAACCTGCGTTAAAGACACTGAAGACTGTCTCTGATGTGGTTAGGAAGAAGTTCATCCAGCTGGCCCAGTACAGTTTTATTGGATTCCCTAATCTTCTGAAAATAGCAAAGACTAAGATCGAAGCCATCAAGCAGGATAAAGAATCCCAGGCAGAATCCATGCTGAGGACCCAATTCAAGATGGAGCTCATTGTTTACAGTCAAGACGGCACATACAGCCAGAGCCTGCAACATGCAAAGGATAAACTGGAAGAGATAGAAAATGACAAGCAGCAATTGCCCCAATTTAATGCTAAAAAGTTGAATTTTGTGAGTGTAGATGTTAGCACAGGCACTCATGCCACCTTGCGTGAGATGAGGTTGCATCTCGAGTCCTACTACACGATTGCAAGCAAGCGTCTAGCTGACCAGATCCCAATGGTGATCCGCTATCTGCTGCTCCAGGAAGCAGCTTTGGAGCTGCAAAGGAACATGTTGCAGTTGCTGCAAGATAAAGACGGTGTAGACATCCTGCTTAAAGAAGACTTTGACATTGGCCAAAAGCGGGAGAGCTTACTGAGTCGCCAGAAACGTCTGATGAAAGCACGCAGCCTCTTGGTTACCTTTTAGAATTCACTTCATAATATGGTCGACTGCAACAGTTTTAATGCAACAAAATCATATGCTGGCAATGAAAAACATGAGCAGCATTAGCAGCAAAGAAAACATTAAGTAGAAATTGAACACTTCACGAAGAAACATAGGCAGCATTTTCCACTTCTATGGACGCCATGCGCCAAAGGGTATATTATGCCTATTGGGCCTATATATAGGTTCCTCCTTATTTGTATGTTTTAGTTAAAATTATTATATAATTTACACTTGAATAGTTTTATTAAACAGCAATATTAAGTAGTCTCCAGATGTAATATTTTATTTTAATGCTTAGGCTTATACAGTCTATATTTATTAGGTCATATAAAGTGCATATATGAGGACAGGAATATGTGTGCATGATTGCATTCAAGGGTGTGTGTGCTTGTGTGTGTGTGTATTTGTGCTCATGTATTATACTGCTTTTAATAGTTTTAAATAAA

Function

symbol description
mxa Predicted to enable GTPase activity and microtubule binding activity. Acts upstream of or within response to arsenic-containing substance; response to bacterium; and response to virus. Predicted to be active in several cellular components, including cytoplasm; microtubule; and nucleus. Is expressed in several structures, including digestive system; gill; heart; immune system; and muscle. Human ortholog(s) of this gene implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Orthologous to human MX1 (MX dynamin like GTPase 1) and MX2 (MX dynamin like GTPase 2).
mxb Predicted to enable GTPase activity and microtubule binding activity. Acts upstream of or within response to virus. Predicted to be active in several cellular components, including cytoplasm; microtubule; and nucleus. Is expressed in head kidney. Human ortholog(s) of this gene implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Orthologous to human MX1 (MX dynamin like GTPase 1) and MX2 (MX dynamin like GTPase 2).
mx1 Enables identical protein binding activity. Involved in antiviral innate immune response; interleukin-27-mediated signaling pathway; and negative regulation of viral genome replication. Located in cytosol; nuclear membrane; and perinuclear region of cytoplasm. Implicated in alopecia areata; avian influenza; liver disease; and prostate cancer. Biomarker of Human papillomavirus infectious disease.
mx2 Enables GTP binding activity. Involved in several processes, including defense response to virus; regulation of nucleocytoplasmic transport; and response to interferon-alpha. Part of nuclear pore.
mx interferon-induced GTP-binding protein Mx

NR:

description
interferon inducible Mx protein

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K14754 MX; interferon-induced GTP-binding protein Mx

RNA

RNA id representative length rna type GC content exon number start site end site
TU467961 True 438 TUCP 0.48 2 4163313 4164324
CI01000299_04158468_04164223.mRNA False 2450 mRNA 0.41 9 4158001 4164715

Neighbor

gene id symbol gene type direction distance location
CI01000299_04136702_04142005 NA coding downstream 15876 4134820 ~ 4142125 (-)
CI01000299_03492360_03492614 NA coding downstream 664857 3492214 ~ 3493144 (-)
CI01000299_03341031_03366645 KLF7, KLF7A, KLF7B coding downstream 791273 3340766 ~ 3366728 (-)
CI01000299_03206204_03214303 MDH1B coding downstream 943698 3206185 ~ 3214303 (-)
CI01000299_03104921_03106385 NA coding downstream 1051616 3104605 ~ 3106385 (-)
CI01000299_04171373_04175441 NA coding upstream 6434 4171149 ~ 4175441 (-)
CI01000299_04186183_04196219 MX1, MXB, MXA coding upstream 20252 4184967 ~ 4197884 (-)
CI01000299_04227918_04239792 EFNB2B coding upstream 62805 4227520 ~ 4239792 (-)
CI01000299_04242809_04251680 ARGLU1 coding upstream 77482 4242197 ~ 4251865 (-)
CI01000299_04370401_04385955 RADIL coding upstream 205686 4370401 ~ 4388020 (-)
G407318 NA non-coding downstream 28781 4129003 ~ 4129220 (-)
G407288 NA non-coding downstream 30361 4121679 ~ 4127640 (-)
G407306 NA non-coding downstream 91353 4066205 ~ 4066648 (-)
G407303 NA non-coding downstream 108174 4049542 ~ 4049827 (-)
G407280 NA non-coding downstream 120217 4034732 ~ 4037784 (-)
G407330 NA non-coding upstream 43082 4207797 ~ 4208154 (-)
G407340 NA non-coding upstream 94767 4259482 ~ 4263461 (-)
G407343 NA non-coding upstream 101639 4266354 ~ 4266553 (-)
G407344 NA non-coding upstream 102504 4267219 ~ 4267442 (-)
G407348 NA non-coding upstream 107197 4271912 ~ 4272172 (-)
G405053 NA other downstream 2139951 2017687 ~ 2018050 (-)
G404976 NA other downstream 2277013 1855639 ~ 1880988 (-)
G404784 NA other downstream 2498001 1659655 ~ 1660000 (-)
G404372 NA other downstream 3082110 1070607 ~ 1075891 (-)
CI01000299_00670925_00672195 NA other downstream 3485145 670680 ~ 673625 (-)
G407413 NA other upstream 311279 4475994 ~ 4550721 (-)
CI01000299_04913779_04927715 NA other upstream 761253 4913373 ~ 4927715 (-)
CI01000299_05428160_05443433 APP, APPA other upstream 1276622 5427661 ~ 5443433 (-)
G407805 NA other upstream 1663121 5835889 ~ 5835989 (-)

Expression


Co-expression Network