CI01000299_04496757_04504238


Basic Information

Item Value
gene id CI01000299_04496757_04504238
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4496386 ~ 4504483 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_04496757_04504238.mRNA
TTATAAAACAACTACTGTTTTGTCCTGGCAAAAAAGACCCAGCACCCAGATTTGTAATGTTGAGGCATAGAGCGCCCCCTGGCGAACGAGCTCTGATCTGCCATCATCTCGCGTGGTCGTGGTTGGTAGTCTTGCTGCTGGACACACTTGTGCCAGACATCGATATCAAACATTTGCAAAGGACGTACACCAGAGGGCAGCAGTAACTCTTTGCTTATATTAGTGAAGGACCAACACATCAATACTTCATGGTTACAGTGTTTCTTTTTGAGCTTGCTATACATCATTCTCACACCGCGTGTCGGGCGTGTTCGCGTGCCTGATCAAAATCTAGAAGAAAAGTGAATTAAAGTGTATTTTTTTCTAACAAAATGTCACTTCAACGTTTGACGTTGGTCATTGTGTTCATCACCTCAGAAACCGTTTCAGGTGAAGGTGTGTTTAAAGCAGTGGGTGAACAAGTTTCTTTTCGTCCAGACAAACCTCTTCCTTCTCCTGTCACCAGCATCATCTGGAAACACATAAACAGTGTTGGAACTGTTGTCAAGGCGATTGAATGGGATGAAGGAGAAATTCTAATCCCGAATCCGAGATTCAAAGACATCACAACTGTTGATGAGAAGACTGGACAAATTAATATAACTAACTTAAAAGTCGAACATAGTGGAGTTTATACCATTGACATCAACAGTAAAGAGCAGGAACAAAGATTCACCTTGACTGTTATGGAGCGGGTCCCCAAACCTGTCATAGAACGAGAGATAATCAAAAATAACATTGTATTTGTGAATTTAACATGCAAGTACAATGAAATGATCACCTGGAAGAATTCTACTGGACAAATACTGCCGGGTTTAGCGCTCCATCCAAAAGGAGAGTTTATCACAGTTAAAAAAACAGCAAATCTGAGCAACTTCTACACCTGTACACTGACGAACGCAGTGAGTGAGGAGACCAGTGATCCGGTCTATGAGAGAGATCTGTTTAAAGCCACATGCAACAGAAAAGGAAAAGCTGTGGGCACCGGTGCAGCTAATAAAGCCTGTGAGAGAATCCTGATTGGGTGGATGGAGCTTGGAAATGAACAAGCTATGAGGGGTGTGGCACTTGCCACATGGTTGTCATGTGACACACTAAGTAACAGTTGTGAGTGTATGATTGATGCTGCCACAGTTCTGCTCATCATGGATCATCTGGAGCTCTAAACCATCTGTGCCTTCATAACTTTGACTGTTTTTCAACTTTGTTGTTTTTTTTATCTTTCTGTTTGCTGGGCCACATAAACGGTGTTGGAAGTTCATAGTCAGGTTATTAATTTATGAATGTAAATATGCATGTTAAATATGTAGATACTTTGTGTTCAAAGAGGGATGAGATGAGAATCTCTTACTGGCACCAAACAGAGTTTTGAAGACTTGATTAGAGTGATTGTATATAAATGTACTGTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_04496757_04504238.mRNA False 1450 mRNA 0.41 5 4496386 4504483

Neighbor

gene id symbol gene type direction distance location
CI01000299_04480751_04492829 NA coding upstream 3270 4480553 ~ 4493116 (+)
CI01000299_04472181_04474247 NA coding upstream 22115 4470956 ~ 4474271 (+)
CI01000299_04269257_04269673 NA coding upstream 226621 4268467 ~ 4269765 (+)
CI01000299_04259743_04263032 ENG1B, EN1 coding upstream 232893 4258921 ~ 4263493 (+)
CI01000299_04131136_04133439 PCNP coding upstream 362584 4131060 ~ 4133941 (+)
CI01000299_04513358_04524537 NA coding downstream 8875 4513358 ~ 4526677 (+)
CI01000299_04532498_04539703 NA coding downstream 27615 4532098 ~ 4539919 (+)
CI01000299_04554181_04557794 NA coding downstream 49628 4554111 ~ 4557840 (+)
CI01000299_04703290_04704365 NA coding downstream 198588 4703071 ~ 4704780 (+)
CI01000299_04736806_04740333 CLIC6 coding downstream 232323 4736806 ~ 4740975 (+)
G405932 NA non-coding upstream 40701 4455446 ~ 4455685 (+)
G405931 NA non-coding upstream 42517 4453592 ~ 4453869 (+)
G405876 NA non-coding upstream 47391 4418304 ~ 4448995 (+)
G405912 NA non-coding upstream 81375 4414792 ~ 4415011 (+)
G405910 NA non-coding upstream 93080 4400579 ~ 4403306 (+)
G405865 NA non-coding downstream 145453 4649936 ~ 4665044 (+)
G405881 NA non-coding downstream 153858 4658341 ~ 4663395 (+)
G405966 NA non-coding downstream 166732 4671215 ~ 4671482 (+)
G405967 NA non-coding downstream 167042 4671525 ~ 4671895 (+)
G406023 NA non-coding downstream 186412 4690895 ~ 4766223 (+)
G405842 NA other upstream 176245 4295533 ~ 4320141 (+)
G405609 NA other upstream 1341212 3154597 ~ 3155174 (+)
G403972 NA other upstream 3890036 604870 ~ 606350 (+)
G403609 NA other upstream 4085598 364139 ~ 410788 (+)
G406096 NA other downstream 419979 4924462 ~ 4927844 (+)
G406244 NA other downstream 866698 5371181 ~ 5373579 (+)
G406161 NA other downstream 1733355 6237838 ~ 6300508 (+)

Expression


Co-expression Network