CI01000299_04532498_04539703


Basic Information

Item Value
gene id CI01000299_04532498_04539703
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4532098 ~ 4539919 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_04532498_04539703.mRNA
ATATTAATACAATTAGGAGACGGACAGCAGCAGGTGCACGACAAATTTTCATACATCATGTCACTGCTCAGCATCCATCTCATGCTGTTTAATTTAGCAACTAAGGCAAAGGGATTGTTTTGTGCTAACAGTGCTAATGTGATGAGTTTGATGCAGGACATTTTGTGATAATAGTAATGCAGTAATTCAGATGGAGATTTATGTGTCTTTAGGGGAGTATGAACATCAAAACATGTAAAATTGTGTCCTACAGATCAGAGTGAAAGACCAACTCTGTCGCATGTTTGTGGTTTCTGGTTTTGCACTTCCTCTGTTATCTCTCTTCTTACACCTCGTACACATACTTAGCAAAATATACTGTTGAAGAAAAGTGCATCAACGTGTACTTTATATAACAAAAATGCCACTTCGATGCTTGACGTTGGTCATCATTGTGTTCATCACCACAGAAGCTGTTTCAGAGCCTGTCCCCAAACCTGTGATAAAAATAGAGAAGACTGATAACCCTGATGCTGTGTATTTGAGATGTGAGTACAGTGAACCAATCATCTGGAAGAATTCTGCTGGAGAAACACTGATGGGTTCACTAATCACTCCGAAAGGACAGTCCATCACAGTCATAAACAATGGAAATCCACAAAACTTCTACACCTGTACACTTGATAACGGCGCAAGTAAAGAAACCAGTGATCCGGTCTATGAGAGAGATCTGTTTGATGATTCAAACGGGGGATTTGTCATTTGGATTGTCATTGTTTTGATCTGCATGGTTTTTATCCTCCTTTTCCTGTTTATACCACCTTTATACGCAAAATCTAGAAGAAAAATGGATAAAAGTGTACTTTTTCTAACAAAAATGTCACTTCGACGTTTGACGTTCGTTACCATCGTTGTGTTCATCACCACAGAAGCGGTTTCAGGTGAATATGTGATAAAAGCAGTGGGTGATCAAGTTTCTTTTCATCCAGACAAACCTCTTCCTTCTCCTGTCACCAGCATTATCTGGAAACACAGAACCACTGGAGGAATTGTTGACAAGGCGATTGAATGGGATGAAGGAGAAATTCTAATCCCAAATCCGAGATTCAAAGACATCACAACTGTTGATAACAAGACTGGACAAATCAATATAACTAATTTAAATTGCAGCCATAGTGGAGTTTATACCATTGACATCAACAGTAAAGAGCAGGAACAAGAATTCAACTTGACTGTTATGGAGCGAGTCCCCAAACCTGTCATAGAAGTGGAGAGGATAGAAGATAACCCTGATGTTGTGTATTTAAGATGCAAGCACAGTGAAAAGGTTATCTGGAAGAATTCTGCTGGAGAAGAACTGACAGGCTCAAAGCTCCATCCGATAGGACAGTCCATCACAGTCAAAAACAAAGGAAATCTAGAAAACTTCTACACCTGTACACTTGATAACGGCGCAAGTAATGAGACCAGTGTACCGGTCTATGAGAGAGATCTGTTTGAAGCACGACCGTCATCCAGCGCGAAACACACGCAGAGTGAGAACCCGTTATGTAGTGTTGTGAATCAACTAAGTTGCCCCAAAGCTGTGTCTCAGAGTTGTTCCGATTCTGAAACCGTATCGATGGATCAGGCAGTGTACTTTTGGGGATACTGATTACCATCACAATCATCCAAATCATTATCATTATCTGTCACTTTGTCCTGTATGAAGTCAGCCCTGACTTTCTCAGTAGGTTTCCTATTGTGTTTTATCTTTTATAATGTTTTTATAGTGTTTTTTTGCTCAGAAGCTTGAGTCTGTAGATTCCCCTATTTTTCTCCAGCTGCTAGACAGAAGTGTGTTTTTTATGCTTTAGGATTATTTTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_04532498_04539703.mRNA True 1849 mRNA 0.40 8 4532098 4539919

Neighbor

gene id symbol gene type direction distance location
CI01000299_04513358_04524537 NA coding upstream 5421 4513358 ~ 4526677 (+)
CI01000299_04496757_04504238 NA coding upstream 27615 4496386 ~ 4504483 (+)
CI01000299_04480751_04492829 NA coding upstream 38982 4480553 ~ 4493116 (+)
CI01000299_04472181_04474247 NA coding upstream 57827 4470956 ~ 4474271 (+)
CI01000299_04269257_04269673 NA coding upstream 262333 4268467 ~ 4269765 (+)
CI01000299_04554181_04557794 NA coding downstream 14192 4554111 ~ 4557840 (+)
CI01000299_04703290_04704365 NA coding downstream 163152 4703071 ~ 4704780 (+)
CI01000299_04736806_04740333 CLIC6 coding downstream 196887 4736806 ~ 4740975 (+)
CI01000299_04819297_04829755 NA coding downstream 278766 4818685 ~ 4829987 (+)
CI01000299_04864582_04885052 RUNX1 coding downstream 324273 4864192 ~ 4885385 (+)
G405932 NA non-coding upstream 76413 4455446 ~ 4455685 (+)
G405931 NA non-coding upstream 78229 4453592 ~ 4453869 (+)
G405876 NA non-coding upstream 83103 4418304 ~ 4448995 (+)
G405912 NA non-coding upstream 117087 4414792 ~ 4415011 (+)
G405865 NA non-coding downstream 110017 4649936 ~ 4665044 (+)
G405881 NA non-coding downstream 118422 4658341 ~ 4663395 (+)
G405966 NA non-coding downstream 131296 4671215 ~ 4671482 (+)
G405967 NA non-coding downstream 131606 4671525 ~ 4671895 (+)
G406023 NA non-coding downstream 150976 4690895 ~ 4766223 (+)
G405842 NA other upstream 211957 4295533 ~ 4320141 (+)
CI01000299_04131136_04133439 PCNP other upstream 398157 4131060 ~ 4133941 (+)
G405609 NA other upstream 1376924 3154597 ~ 3155174 (+)
G403972 NA other upstream 3925748 604870 ~ 606350 (+)
G406096 NA other downstream 384543 4924462 ~ 4927844 (+)
G406244 NA other downstream 831262 5371181 ~ 5373579 (+)
G406161 NA other downstream 1697919 6237838 ~ 6300508 (+)

Expression


Co-expression Network