CI01000299_04819297_04829755


Basic Information

Item Value
gene id CI01000299_04819297_04829755
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4818685 ~ 4829987 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_04819297_04829755.mRNA
TTATATAACAAAATATCAAAGCAAATGCCACCTGCACAGACCATCGACGCTGCAGCATTTTTGGAACCTTCGTTTTTTCGGAATCCCAAATTCGAAATTCAAAATCAAAACACAATCAAACAGGCATTCTAGAACACTGACGTCTGTAGAAGCGTGTCTGCATGTTGGGCTGAAATCTGACTCCGGGTCGGGAGGGAGAGCAGCTGGTCGCACACGCCGATACCACCTAAAGCACTCCGCCCACCACTCCCAAACCTCCCGTCCAAACGGTTGAGAGGACGGCGAGGACACAGGTGTGGGTGTGTTTGGCATGTGCTGGAGGCGTGGTGCAGGTGTACATGTGCCAATTTGGGGCCGTCTAAGCTGGAGGTGGACGCAGGTGTGTGGCTACGAGATAATAGGTGCTTGAGGGGCTGCAAGGGGGCGTTTCTGCGTCATATGAGCAGGGTGTTCTTTAGACAAAATGAAACGTCCTAATCAGCTGCTTGATGGGCAAGAGTCTTGTGCGATATCATGACCCACTTGGACGTGTAATGCAATGCCTTCATTAAGGGCAGGTGAGACGGTAACGAGGCCTGCAATTATGTTGACGCCCGTCATGCAAAACACATAATGATGTTTGATTTGATCCAGGGAGACGCTTTCTGTGGGCCGCCACAACCACAAACCAAGTCTGCGACCGGTCACGGCTCTCTAGGCACTAGAGAACTGCAAGATAAAGATAGACAAGAGGGACTGAAGAGCGAGAAGGGGGAGGGAGAATACGTGTTGATGTCAGCGTGTGAATCGCCGGAAAAAACCACAGCGACACGTTTGCGCTCCTGCTCTTTTGCAAAAGGGGCAAAACCGGGAGCCTTTCAAAATTCGGGAGCAGATCAAGTTGGAAGCCTTGGATTCAGACGAAGACGAGGAGCAGCCGCCGCTCGCGATGGCCTCCAACAGCATCTTCGAAAGCTTCCCGTCCTACCAGTCGTGCTTCACCCGGGAATCTGCTCCAGCTGGACGGAGCTGTTTGAACATCGCCACATTGTCATCGTGTCTTTCCGCACGTGTATCAACAGTCATGTTTGCCCATGTGCATTTGCATATACATTTATATATCAAATGAGAATGTTTGTTGCATACAGCCCATTTGCATTTCCTTTTATCAAGGAAAAGCTATCCAAATGCAAAGCTGAAGAACATGCCAACATATGTAAGAATGCACATGGAGTCACATACTGTATGCATGCAGGGTTTGCATGTTTGTGGCCTTTTTCATCTGCCAGTCTACTTGCAGTGCACAAACTGACAGACGCGTGTGAGGATTTACCTCGTATCTCTCTGTGTGTCGACACAGATGGATTTATGGTGGTTCTGGAGGCTCGTCGCTACGCTGCGGACCTGCAGATGGAGCGTCGCGTCCCAGCGACTTCACGCCTGGCCACCGCTGATTCTGTTTATCTACATCCACAGGCACCTGAGAAGGAAGCCGCTCGGCCTGGTCCATGCAGATTCAGAGAGGGACTTACATAGGGTCATAAATTCCTGCTCCCATTTGTCCCATTGGGGTGCTTTTCAAGAGTTTAGCGGAACTAGGTGTGGATGGGAACGGTGGCCACATTAGAGTTATGGGAATGTGGTCACCGACCATAAATTAGATGCTTTACTACACATATTTTACCTTTGCAAGGAAAAGTGCATCTTTCCCAGCACCTTCCCAAAGGCCTTTTTGGAGATTCTGACTCTCTATAATACCTGATACGTA

Function

NR:

description
hypothetical protein cypCar_00022258

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_04819297_04829755.mRNA True 1747 mRNA 0.50 5 4818685 4829987

Neighbor

gene id symbol gene type direction distance location
CI01000299_04736806_04740333 CLIC6 coding upstream 77710 4736806 ~ 4740975 (+)
CI01000299_04703290_04704365 NA coding upstream 114088 4703071 ~ 4704780 (+)
CI01000299_04554181_04557794 NA coding upstream 260845 4554111 ~ 4557840 (+)
CI01000299_04532498_04539703 NA coding upstream 278766 4532098 ~ 4539919 (+)
CI01000299_04513358_04524537 NA coding upstream 292008 4513358 ~ 4526677 (+)
CI01000299_04864582_04885052 RUNX1 coding downstream 34205 4864192 ~ 4885385 (+)
CI01000299_04892566_04900169 NA coding downstream 60404 4890391 ~ 4900536 (+)
CI01000299_04906697_04907091 NA coding downstream 76710 4906697 ~ 4910073 (+)
CI01000299_05128395_05192154 NA coding downstream 298361 5128348 ~ 5192994 (+)
CI01000299_05254419_05314859 NA coding downstream 424432 5254419 ~ 5316243 (+)
G406023 NA non-coding upstream 52462 4690895 ~ 4766223 (+)
G405967 NA non-coding upstream 146790 4671525 ~ 4671895 (+)
G405966 NA non-coding upstream 147203 4671215 ~ 4671482 (+)
G405865 NA non-coding upstream 153641 4649936 ~ 4665044 (+)
G405999 NA non-coding downstream 104328 4934315 ~ 4936448 (+)
G406101 NA non-coding downstream 126163 4956150 ~ 4956356 (+)
G406134 NA non-coding downstream 426752 5256739 ~ 5257212 (+)
G406203 NA non-coding downstream 482181 5312168 ~ 5745426 (+)
CI01000299_04480751_04492829 NA other upstream 312768 4480553 ~ 4493116 (+)
G405842 NA other upstream 498544 4295533 ~ 4320141 (+)
CI01000299_04131136_04133439 PCNP other upstream 684744 4131060 ~ 4133941 (+)
G405609 NA other upstream 1663511 3154597 ~ 3155174 (+)
G406096 NA other downstream 94475 4924462 ~ 4927844 (+)
G406244 NA other downstream 541194 5371181 ~ 5373579 (+)
G406161 NA other downstream 1407851 6237838 ~ 6300508 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location