CI01000299_05799020_05801977


Basic Information

Item Value
gene id CI01000299_05799020_05801977
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5798942 ~ 5802114 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_05799020_05801977.mRNA
CTATAAAATCAATTGTTTCTCAAGAGAATTTAAGGCAAAACTTTTGTCAAAAAGCTCTATGTAGCGAACACGTTCTAGATGAGTGGCGCTGAAGGTGTGTTCACATACCAGGAATGCATTATGGATGTGTGTAAACAGGTTGTGAATGGGAGGACAGCTGTGGGCGAGTGGCTGGAACATGCACGGCATCACGCCGCATGGTCTGACAACTCTACCAGTCCATGGCAAAGATGTTCAGTGATTAAAGGAGAGTTGCTGAGAGTATCAATGTCTGACAAACTGCTGATGAATGACACCTCAAGCTCCAACCACACGTCTGTCTACCCCAGCGAAGGCATGCGCATTCTGCAGATGATCGTGACCGTGATGATCTTCATCGTGGGTGTTTCTCTAAACGGTCTGGTGGTCTGGGCGTTGGGGGTTCGAGTTTGGTGCCGCAATAAGGGATCCACAGAGACGCAGAGCGCCGACAGCTTCCGGATCTATGTAGTAAACCTGGCGCTTGCAGACTTGGTGCTGCTGTTACGTACGCCACTAATGGTGCCGTACTTGGTGAACCACTTCACTTGGACATTGGGGGAAACCGCATGTAAGCTGGTCATTTACCTGCGCTGCCTCGGATTGTACGCGAGCGCGTTTTTGCTGTGCGCTGTCGCAGTGGAGCGCTGCTTATGTCTCCTTAGACCAGTTTGGGCACGAATGAAGCGCCCTCGTTGGGCCGTGCCGTTGGCCTGCGTTGCAATCTGGGTGTTAGCGGCATTGTTCGCTTTACCCTACATTGGCACAGCCAAAATCATTCTCTGGGAGAACCGTACGGCCTGCATAGAAAGTGATTTGGGAGTAGGACAAGCCTTAATAGTTGTGGAAACCTTGGCAGGATTCTTGCTACCGCTGGTGATCTTCATGTCGTGCAATATTGCAGTGATTTTTTGCGCAAAGAAGGCCGAAAGCGCAATGTCTTCCCCTACCACGTCATCTGGACCAGGTTACACAACCCACCGGCTGACTCGTCTCTACCGGGTCCTCTTTCTCACCATGCTCCTCTTCCTAACCTGCTGGGTGCCTTACTTCACCTGCCGCTTCTTAAGGGCTCTCTCACAGGATCACCCGAAGCTCAAAGAAAGAGTGATTGCAGGCGCTTATGTGGCGCTATTTCTAGTTTACATTAAGAGCGCACTCAACCCCATCCTGTACGTGTTTGCAGCTCGTGGACTCGGCCGCACCATTCGTGCCTCACTTCTCTCAACAATCGAGCGAGTCTTCAATGAGGAATTATCCGAGTCTTTACGAAGAAAGTCCTTGCGAAGGAGAGACTCTCAGTTTTAGGGGAGCTTGAAGAGCTTTAGCGTAAAGTGCCGATCTGTGACCGGCTCTAGCAAGAGTCAGGAGGTCAAGAAATTTGGACAAACAAGCAGATCTCAGGTGCTTTTGAGCGGGCAAATCATGAAAAATTGACAACAGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_05799020_05801977.mRNA True 1463 mRNA 0.50 3 5798942 5802114

Neighbor

gene id symbol gene type direction distance location
CI01000299_05778912_05790662 NA coding upstream 8187 5778563 ~ 5790755 (+)
CI01000299_05732790_05737401 N6AMT1 coding upstream 61140 5732790 ~ 5737802 (+)
CI01000299_05619817_05725510 NA coding upstream 71503 5619704 ~ 5727439 (+)
CI01000299_05392812_05418070 GART coding upstream 380590 5392692 ~ 5418352 (+)
CI01000299_05331367_05364944 NA coding upstream 433965 5331201 ~ 5364977 (+)
CI01000299_05816534_05817445 NA coding downstream 14420 5816534 ~ 5817456 (+)
CI01000299_05836707_05843149 NA coding downstream 34187 5836301 ~ 5843594 (+)
CI01000299_05844429_05845510 NA coding downstream 42047 5844161 ~ 5845665 (+)
CI01000299_05864998_05873333 NA coding downstream 61520 5863634 ~ 5873515 (+)
CI01000299_05903841_05913302 NA coding downstream 99350 5901464 ~ 5915312 (+)
G406164 NA non-coding upstream 36626 5759224 ~ 5762316 (+)
G406354 NA non-coding upstream 159076 5634748 ~ 5639866 (+)
G406315 NA non-coding upstream 244074 5552642 ~ 5554868 (+)
G405987 NA non-coding upstream 369297 5424589 ~ 5429645 (+)
G405992 NA non-coding upstream 419927 5376267 ~ 5379015 (+)
G406210 NA non-coding downstream 27970 5830084 ~ 5831741 (+)
G406417 NA non-coding downstream 97543 5899657 ~ 5899988 (+)
G406168 NA non-coding downstream 126068 5928182 ~ 5929929 (+)
G406427 NA non-coding downstream 146584 5948698 ~ 5948928 (+)
G406213 NA non-coding downstream 211294 6013408 ~ 6015647 (+)
G406244 NA other upstream 425363 5371181 ~ 5373579 (+)
G406096 NA other upstream 871098 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1094317 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1293025 4480553 ~ 4493116 (+)
G405842 NA other upstream 1478801 4295533 ~ 4320141 (+)
G406161 NA other downstream 435724 6237838 ~ 6300508 (+)

Expression


Co-expression Network