CI01000299_05925030_05926229



Basic Information


Item Value
gene id CI01000299_05925030_05926229
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5924670 ~ 5926297 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000299_05925030_05926229.mRNA
GTTTAAATGTTTCTGATAGCTGTTTGTTATGCGTTTTTTTTTACCGTTGTGACAACTTACCCCACATAGTGTGACGACATGCCTATTAAACTAAACGAATGTTTTAAAAACGTTTTTTCTTGGTTATGCGGACGTTAAAGGAACATTCCATTGTATCATTCGTCAAACATTAAGAAAAACGTTATTTTGAATGTTGTCTGAACGTTTTGAAACGTTTAAAAAACGTTATTCCAGTGAACGTTCCATGATGTTTTTGTGCTCAACATTATTAAAGACCAGATAACGTTGAACAAACGTTCTATTAACATAACTCCGCCTCTTTTTCTGCTTCTTCAGGTGATCCAGGCATGCAGTTGCGTGATGTTTCTGCGCTCGTGTTCGCTGGCCGTGAGACGGAGCTGCACTTCCGCTCCGCTTCAGACGCTCCTCACCATCAGACCCATCAGCACCACCTGGACAGCCAGGAAAGATGCAGCCGAGAAGCTGGACCTGGACATATGGAAGTCCGTGATGAAGTCTCAACCGCTGCACGACGAGGATCCGAGCCCGAGTCCGTCAGCGCTGGACGTCAACCGCGAGCTGGTGGAGATGTGGCATCAGGCGGGGAAGTTTGTTCCGAAGAACATCACGGACGAGCAGCTGGAGGATCTCGCCGCGCTGACCACCAAATCCGCCAAGAGGAAGTACCTGAAGTTTCTCGCTATTAAAGAAGCGCACAAGATCTCCAAAAAGGAGAAGCGAGATAAGAAGAAGTCTGAGAGGGACACGGATGCAGAAACAGAGGAGCGAGAGGAGCGAGAAAAACTCAAGAACACCTTCCTGATGAAGTTCTGGAACAGCTCCATGGATCGCCTCCAGAACTGGCGGGCGGCGCAGGCCATGCGCTTCGGCCAGCCGCTGGTGTACGACATGAGCTACGAGCAGCACATGACGCAGCGGGAGATGGAGAACACCGTGTCGCAGCTGCTGGAGACGGAAGGCTGGAACCGCCGCGCCGCCGACCCGTTTCACCTGCACTTCTGCAGCCTGCAGCCAGGCGGCGCGTATCACCGCAAGCTCCTCAAACGCTACGGCACAGAAACCTGGGAACGGCTGCTCATCACGGCCACCGCGCGCCGACCCATAGACGTGTTTCCCCCCGAGGACCTGGTCTACCTCACGGCCGATTCGCGCAACGTCCTGCGCACGTTCGACCACAGGAAGGTGTACGTTGTGGGCGCGATGGTGGACCGGTCCATTCACTCGGGCGTTTCACTGGCTAACGCCAAACGCCTCAAGCTGGCCACGGCGCGCCTCCCGCTGGATGAGTATCTGGACTGGGACTCTGGAGCCAAGAATCTGACCCTGGATCAGATGATCCGCATCCTGGCCACGGTTAAAGACACGGGCAGCTGGAAGGAGGCGCTGGAGTTTGTGCCGAAGAGGAAACACTGCGGCTTTCATCAGCGGCAGAAGACCGGAGCGTTTGTGAGAACTGTAAAGACTCAATCCGTCCGTGACGAACCTGCTGCTCGAGGACAGAAGAATAAAACAGACGGACACAAAAGAAAAGAAAGATAGACGTGGAGGGAGGAAGAAGGTTAAGAATGTAATACTGTTTATTTCCCTTTAATTGATAATTATTGTCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000299_05925030_05926229.mRNA True 1628 mRNA 0.52 1 5924670 5926297

Neighbor


gene id symbol gene type direction distance location
CI01000299_05903841_05913302 NA coding upstream 9358 5901464 ~ 5915312 (+)
CI01000299_05864998_05873333 NA coding upstream 51155 5863634 ~ 5873515 (+)
CI01000299_05844429_05845510 NA coding upstream 79005 5844161 ~ 5845665 (+)
CI01000299_05836707_05843149 NA coding upstream 81076 5836301 ~ 5843594 (+)
CI01000299_05816534_05817445 NA coding upstream 107214 5816534 ~ 5817456 (+)
CI01000299_05935373_05943285 ERCC5 coding downstream 8606 5934903 ~ 5943413 (+)
CI01000299_05955084_05970603 NA coding downstream 27919 5954216 ~ 5971417 (+)
CI01000299_05988564_06002758 NA coding downstream 61798 5988095 ~ 6003021 (+)
CI01000299_06018839_06023448 NA coding downstream 92542 6018839 ~ 6023510 (+)
CI01000299_06029307_06034445 NA coding downstream 102660 6028957 ~ 6034956 (+)
G406417 NA non-coding upstream 24682 5899657 ~ 5899988 (+)
G406210 NA non-coding upstream 92929 5830084 ~ 5831741 (+)
G406189 NA non-coding upstream 96701 5756777 ~ 5827969 (+)
G406164 NA non-coding upstream 162354 5759224 ~ 5762316 (+)
G406354 NA non-coding upstream 284804 5634748 ~ 5639866 (+)
G406168 NA non-coding downstream 1885 5928182 ~ 5929929 (+)
G406427 NA non-coding downstream 22401 5948698 ~ 5948928 (+)
G406213 NA non-coding downstream 87111 6013408 ~ 6015647 (+)
G406220 NA non-coding downstream 98754 6025051 ~ 6025357 (+)
G406458 NA non-coding downstream 207546 6133843 ~ 6134043 (+)
G406244 NA other upstream 551091 5371181 ~ 5373579 (+)
G406096 NA other upstream 996826 4924462 ~ 4927844 (+)
CI01000299_04703290_04704365 NA other upstream 1220045 4703071 ~ 4704780 (+)
CI01000299_04480751_04492829 NA other upstream 1418753 4480553 ~ 4493116 (+)
G405842 NA other upstream 1604529 4295533 ~ 4320141 (+)
G406161 NA other downstream 311541 6237838 ~ 6300508 (+)

Expression



Co-expression Network